Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003905

Physical Location & Seq

Genomic Coordinates Forward (+)

23917094 .. 23919276

Gene Structure 2183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0255900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGAAGGAGAAGATGGTGCTGCTTCTGATCATCTTCACCATCATCACGGTGTTTATGGCATTCGAAACAATCACATACAAAATCCTCATCAGCATCACAACCAACTCTTCAAGCGTGGTCCTCCGTTGACAGCCATAGACAGGTTCCTGTGGTCTCAAAACAATGCAAAGAACAAAGAGAGGCTCATCTCCTCAAATGGGTTTTCCTCATTTGGTGGGGCAATGGGTGATCTGCATGCTTGTTCGAATTGGCCGCCGAGTAGTCTCGGAGAGACTAGCTTGGATGAACTTCTTTTTCATGATCATGGTGAGGCCATGACTTGGCCTCCAGAGAAAATTCAAAACCCTAACATGGGGTTCAAAGAAGATCAACTGAAGGTGGGTTCTAAAGGGGTGGGAAAGAGAGCTAAAACGGGTTCATCTGTGCCTTTAATCAAAGGACAGTGGGCAGATGAAGAAGACAGAAAGCTGATGAGATTGGTGAAGCAATATGGAGTGACGAAATGGGCACAGATAGCTGAGAAGCTTGTAGGTAGAGCTGGGAAGCAATGTAGAGAAAGGTGGCATAATCATTTGCGCCCTGATATCAAGAAAGATAGTTGGACTGAAGAGGAAGAGAAGATATTAGTGGAAGTTCATGCTGAGGTTGGAAACCGTTGGGCAGAGATTGCCAAACGCATTCCGGGAAGAACCGAAAATGCCATTAAGAATCATTGGAATGCTACAAAAAGGAGGCAGAATTCAAGGAGAAAGAACAAACAGACATATACCAAAAATGGACCATCATCATCAAATAAGCCTCCTCAACCTTCCATACTTCAAAACTACATAAGAAGCAAGATATTCAATAACAAAGCCAACAACAACTCTTCTTCCAATGCTCCGCCTACCCCAAGCAACATCAGCACCACTACCCCTACCAGCCCCTCCAATCTCACCCAGGAAGAACCTTCAAAAATCCCCTTCAACATTTTGCTCTCGGACCCATCGGATTTATCTAGTTGTGAACACTCTCCATTGAACATTGCAGCTGATTCCTACAATAATGATGAGGAACTTCTCTTCATGCAGAACTTCTTCAACAACAACAATAATGTTGACAATCATAATCATCAGCAGCAGCAGCCATTACCCATCCACGATTACAATAATGACCTTACTGCAAGTCCAATGGATACTACTGATTGGCTTGTCACTTCAACTCCAAAACCAAACATGCACACCAACAGAAACTTCCAAGCAGCTGTTAACAATATCGAATCCATCAAGAATTCTACAGAAAACCCGCAATCCATTAATCCCCCTACTACCCATCTCAGTTCTGATCTCTACCTCTCTTACCTCTTAAATGGAGGAGCCGGTTCATCATCATCTTCCGCGAATCATGATCATCATATGGGTAATTACTATAACATGAACATTGATTTGGTGACTCATCAACATCAAGCAACTTCTGCAACTGAAAGGAGAGAGATGGATCTGATTGAGATGGTTTCTTCTTCGTCTTCTTCTCAGTTTGCTCAAGGTACCAACAATACTAGCTTCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000956 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010605 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0023052 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0034655 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046677 GO:0046700 GO:0048519 GO:0048571 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 map03013 map03015

Pfam Domains

Protein Families

Smg4_UPF3

Protein Analysis

516

Amino Acids

58.04

Weight (kDa)

6.98

Isoelectric Point (pI)

53.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	146 - 192	2.2e-15	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	149 - 206	8.8e-19	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	198 - 240	1.9e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	201 - 245	3.4e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33980 AT1G33980
fragaria_vesca	FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510
malus_domestica	MD08G1216600.v1.1 MD15G1403800.v1.1
prunus_persica	Prupe.1G550000_v2.0.a1
pyrus_communis	pycom08g18750 pycom15g36110
rosa_chinensis	RchiOBHm_Chr6g0271031 RchiOBHm_Chr7g0229091
rosa_laevigata	RLG00000001531
rosa_multiflora	Rmu_sc0000271.1_g000018
rosa_roxburghii	Rroxscaffold_3G00230720
rosa_rugosa	Rorug07G0255600 Rorug07G0255700 Rorug07G0255700 Rorug07G0255800 Rorug07G0255900 Rorug07G0256000
rosa_samantha	Rh7AG406900 Rh7BG386300 Rh7CG424600 Rh7DG400900
rosa_wichuraiana	Rw7G033780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1526
AccB1I	GGYRCC	1 cut(s)	1526
AccB7I	CCANNNNNTGG	1 cut(s)	321
AccII	CGCG	1 cut(s)	1379
AciI	CCGC	4 cut(s)	254, 884, 1286, 1377
AclWI	GGATC	1 cut(s)	1485
AcoI	YGGCCR	1 cut(s)	251
AcsI	RAATTY	3 cut(s)	336, 739, 1270
AcuI	CTGAAG	2 cut(s)	395, 627
AfaI	GTAC	1 cut(s)	1528
AfiI	CCNNNNNNNGG	5 cut(s)	141, 198, 321, 352, 353
AjnI	CCWGG	1 cut(s)	939
AjuI	GAANNNNNNNTTGG	4 cut(s)	1217, 1249, 1409, 1441
AluBI	AGCT	9 cut(s)	279, 407, 469, 518, 526, 539, 1031, 1244, 1542
AluI	AGCT	9 cut(s)	279, 407, 469, 518, 526, 539, 1031, 1244, 1542
Alw26I	GTCTC	3 cut(s)	159, 266, 269
AlwI	GGATC	1 cut(s)	1485
AoxI	GGCC	3 cut(s)	251, 312, 323
ApeKI	GCWGC	6 cut(s)	20, 1028, 1117, 1120, 1123, 1241
ApoI	RAATTY	3 cut(s)	336, 739, 1270
AseI	ATTAAT	1 cut(s)	1296
Asp700I	GAANNNNTTC	1 cut(s)	1076
Asp718I	GGTACC	1 cut(s)	1526
AspLEI	GCGC	1 cut(s)	579
AspS9I	GGNCC	3 cut(s)	119, 779, 982
AsuC2I	CCSGG	1 cut(s)	684
AsuHPI	GGTGA	6 cut(s)	29, 239, 320, 493, 928, 1441
AsuII	TTCGAA	2 cut(s)	64, 245
AvaII	GGWCC	3 cut(s)	119, 779, 982
BaeGI	GKGCMC	1 cut(s)	511
BanI	GGYRCC	1 cut(s)	1526
BbsI	GAAGAC	2 cut(s)	465, 1497
BbvCI	CCTCAGC	1 cut(s)	642
BbvI	GCAGC	6 cut(s)	7, 1040, 1129, 1132, 1135, 1253
BccI	CCATC	9 cut(s)	8, 48, 790, 994, 1142, 1271, 1320, 1468, 1483
BciT130I	CCWGG	1 cut(s)	941
BciVI	GTATCC	1 cut(s)	1168
BclI	TGATCA	3 cut(s)	28, 301, 1387
BcnI	CCSGG	1 cut(s)	684
BcoDI	GTCTC	3 cut(s)	159, 266, 269
BfaI	CTAG	3 cut(s)	276, 999, 1539
BfmI	CTRYAG	1 cut(s)	1275
BfuI	GTATCC	1 cut(s)	1168
BisI	GCNGC	7 cut(s)	21, 254, 1029, 1118, 1121, 1124, 1242
BlsI	GCNGC	7 cut(s)	22, 255, 1030, 1119, 1122, 1125, 1243
Bme1390I	CCNGG	2 cut(s)	684, 941
Bme18I	GGWCC	3 cut(s)	119, 779, 982
BmgT120I	GGNCC	3 cut(s)	119, 779, 982
BmiI	GGNNCC	4 cut(s)	146, 984, 1357, 1528
BmrFI	CCNGG	2 cut(s)	684, 941
BmsI	GCATC	1 cut(s)	103
BpiI	GAAGAC	2 cut(s)	465, 1497
BpmI	CTGGAG	1 cut(s)	312
Bpu10I	CCTNAGC	1 cut(s)	642
Bpu14I	TTCGAA	2 cut(s)	64, 245
BpuEI	CTTGAG	1 cut(s)	1506
BpuMI	CCSGG	1 cut(s)	684
BsaI	GGTCTC	1 cut(s)	159
BsaJI	CCNNGG	1 cut(s)	939
BsaXI	ACNNNNNCTCC	4 cut(s)	310, 340, 1186, 1216
Bsc4I	CCNNNNNNNGG	5 cut(s)	141, 198, 321, 352, 353
Bse118I	RCCGGY	1 cut(s)	1358
Bse3DI	GCAATG	3 cut(s)	228, 554, 1023
BseBI	CCWGG	1 cut(s)	941
BseDI	CCNNGG	1 cut(s)	939
BseGI	GGATG	2 cut(s)	289, 1134
BseLI	CCNNNNNNNGG	5 cut(s)	141, 198, 321, 352, 353
BseMI	GCAATG	3 cut(s)	228, 554, 1023
BseMII	CTCAG	4 cut(s)	510, 633, 1330, 1526
BseRI	GAGGAG	3 cut(s)	181, 792, 1368
BseSI	GKGCMC	1 cut(s)	511
BseXI	GCAGC	6 cut(s)	7, 1040, 1129, 1132, 1135, 1253
BseYI	CCCAGC	1 cut(s)	539
Bsh1236I	CGCG	1 cut(s)	1379
BshFI	GGCC	3 cut(s)	253, 314, 325
BshNI	GGYRCC	1 cut(s)	1526
BsiSI	CCGG	2 cut(s)	683, 1359
BslI	CCNNNNNNNGG	5 cut(s)	141, 198, 321, 352, 353
BsmAI	GTCTC	3 cut(s)	159, 266, 269
BsmI	GAATGC	3 cut(s)	60, 678, 724
BsnI	GGCC	3 cut(s)	253, 314, 325
Bso31I	GGTCTC	1 cut(s)	159
Bsp119I	TTCGAA	2 cut(s)	64, 245
Bsp1286I	GDGCHC	1 cut(s)	511
Bsp143I	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
BspACI	CCGC	4 cut(s)	254, 884, 1286, 1377
BspANI	GGCC	3 cut(s)	253, 314, 325
BspCNI	CTCAG	4 cut(s)	511, 634, 1329, 1525
BspFNI	CGCG	1 cut(s)	1379
BspHI	TCATGA	2 cut(s)	298, 1384
BspLI	GGNNCC	4 cut(s)	146, 984, 1357, 1528
BspPI	GGATC	1 cut(s)	1485
BspT104I	TTCGAA	2 cut(s)	64, 245
BspT107I	GGYRCC	1 cut(s)	1526
BspTNI	GGTCTC	1 cut(s)	159
BsrDI	GCAATG	3 cut(s)	228, 554, 1023
BsrFI	RCCGGY	1 cut(s)	1358
BssAI	RCCGGY	1 cut(s)	1358
BssECI	CCNNGG	1 cut(s)	939
BssMI	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
Bst2UI	CCWGG	1 cut(s)	941
Bst4CI	ACNGT	3 cut(s)	50, 444, 656
Bst6I	CTCTTC	5 cut(s)	113, 603, 609, 874, 1067
BstAPI	GCANNNNNTGC	2 cut(s)	668, 1454
BstBI	TTCGAA	2 cut(s)	64, 245
BstC8I	GCNNGC	1 cut(s)	237
BstDEI	CTNAG	4 cut(s)	519, 642, 1316, 1512
BstF5I	GGATG	2 cut(s)	289, 1134
BstFNI	CGCG	1 cut(s)	1379
BstHHI	GCGC	1 cut(s)	579
BstKTI	GATC	7 cut(s)	31, 232, 304, 370, 1327, 1390, 1480
BstMAI	GTCTC	3 cut(s)	159, 266, 269
BstMBI	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
BstMWI	GCNNNNNNNGC	5 cut(s)	515, 668, 903, 1123, 1454
BstNI	CCWGG	1 cut(s)	941
BstNSI	RCATGY	2 cut(s)	239, 1219
BstSCI	CCNGG	2 cut(s)	682, 939
BstSFI	CTRYAG	1 cut(s)	1275
BstSLI	GKGCMC	1 cut(s)	511
BstUI	CGCG	1 cut(s)	1379
BstV1I	GCAGC	6 cut(s)	7, 1040, 1129, 1132, 1135, 1253
BstV2I	GAAGAC	2 cut(s)	465, 1497
BstX2I	RGATCY	1 cut(s)	1477
BstYI	RGATCY	1 cut(s)	1477
BsuI	GTATCC	1 cut(s)	1168
BsuRI	GGCC	3 cut(s)	253, 314, 325
BtsCI	GGATG	2 cut(s)	289, 1134
BtsIMutI	CAGTG	1 cut(s)	449
Cac8I	GCNNGC	1 cut(s)	237
CciI	TCATGA	2 cut(s)	298, 1384
CfoI	GCGC	1 cut(s)	579
Cfr10I	RCCGGY	1 cut(s)	1358
Cfr13I	GGNCC	3 cut(s)	119, 779, 982
Csp6I	GTAC	1 cut(s)	1527
CviQI	GTAC	1 cut(s)	1527
DdeI	CTNAG	4 cut(s)	519, 642, 1316, 1512
DpnI	GATC	7 cut(s)	30, 231, 303, 369, 1326, 1389, 1479
DpnII	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
EaeI	YGGCCR	1 cut(s)	251
Eam1104I	CTCTTC	5 cut(s)	113, 603, 609, 874, 1067
EarI	CTCTTC	5 cut(s)	113, 603, 609, 874, 1067
EciI	GGCGGA	1 cut(s)	873
Eco31I	GGTCTC	1 cut(s)	159
Eco32I	GATATC	1 cut(s)	586
Eco47I	GGWCC	3 cut(s)	119, 779, 982
Eco57I	CTGAAG	2 cut(s)	395, 627
EcoRI	GAATTC	2 cut(s)	739, 1270
EcoRII	CCWGG	1 cut(s)	939
EcoRV	GATATC	1 cut(s)	586
FauI	CCCGC	1 cut(s)	1293
FauNDI	CATATG	1 cut(s)	1395
FbaI	TGATCA	3 cut(s)	28, 301, 1387
Fnu4HI	GCNGC	7 cut(s)	21, 254, 1029, 1118, 1121, 1124, 1242
FokI	GGATG	2 cut(s)	296, 1121
Fsp4HI	GCNGC	7 cut(s)	21, 254, 1029, 1118, 1121, 1124, 1242
FspBI	CTAG	3 cut(s)	276, 999, 1539
GlaI	GCGC	1 cut(s)	578
GluI	GCNGC	7 cut(s)	21, 254, 1029, 1118, 1121, 1124, 1242
GsaI	CCCAGC	1 cut(s)	543
GsuI	CTGGAG	1 cut(s)	312
HaeIII	GGCC	3 cut(s)	253, 314, 325
HapII	CCGG	2 cut(s)	683, 1359
HhaI	GCGC	1 cut(s)	579
Hin6I	GCGC	1 cut(s)	577
HinP1I	GCGC	1 cut(s)	577
HincII	GTYRAC	3 cut(s)	129, 1099, 1249
HindII	GTYRAC	3 cut(s)	129, 1099, 1249
HindIII	AAGCTT	1 cut(s)	524
HinfI	GANTC	5 cut(s)	709, 1034, 1259, 1381, 1432
HpaI	GTTAAC	1 cut(s)	1249
HpaII	CCGG	2 cut(s)	683, 1359
HphI	GGTGA	6 cut(s)	29, 239, 320, 493, 928, 1441
Hpy166II	GTNNAC	4 cut(s)	129, 1007, 1099, 1249
Hpy188I	TCNGA	6 cut(s)	28, 269, 982, 991, 1324, 1482
Hpy188III	TCNNGA	5 cut(s)	299, 329, 589, 1267, 1385
Hpy8I	GTNNAC	4 cut(s)	129, 1007, 1099, 1249
HpyAV	CCTTC	4 cut(s)	370, 819, 960, 973
HpyCH4III	ACNGT	3 cut(s)	50, 444, 656
HpyCH4V	TGCA	7 cut(s)	167, 235, 1028, 1069, 1163, 1219, 1457
HpyF10VI	GCNNNNNNNGC	5 cut(s)	515, 668, 903, 1123, 1454
HpyF3I	CTNAG	4 cut(s)	519, 642, 1316, 1512
HspAI	GCGC	1 cut(s)	577
KpnI	GGTACC	1 cut(s)	1530
Ksp22I	TGATCA	3 cut(s)	28, 301, 1387
KspAI	GTTAAC	1 cut(s)	1249
Kzo9I	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
LmnI	GCTCC	2 cut(s)	886, 1355
Lsp1109I	GCAGC	6 cut(s)	7, 1040, 1129, 1132, 1135, 1253
LweI	GCATC	1 cut(s)	103
MaeI	CTAG	3 cut(s)	276, 999, 1539
MaeIII	GTNAC	3 cut(s)	496, 1192, 1429
MalI	GATC	7 cut(s)	30, 231, 303, 369, 1326, 1389, 1479
MboI	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
MflI	RGATCY	1 cut(s)	1477
MhlI	GDGCHC	1 cut(s)	511
MluCI	AATT	5 cut(s)	247, 336, 739, 1270, 1402
MlyI	GAGTC	1 cut(s)	1426
MmeI	TCCRAC	2 cut(s)	581, 628
MroXI	GAANNNNTTC	1 cut(s)	1076
MseI	TTAA	5 cut(s)	431, 705, 1248, 1296, 1346
MslI	CAYNNNNRTG	3 cut(s)	48, 303, 717
MspA1I	CMGCKG	2 cut(s)	1031, 1244
MspI	CCGG	2 cut(s)	683, 1359
MspR9I	CCNGG	2 cut(s)	684, 941
Mva1269I	GAATGC	3 cut(s)	60, 678, 724
MvaI	CCWGG	1 cut(s)	941
MvnI	CGCG	1 cut(s)	1379
MwoI	GCNNNNNNNGC	5 cut(s)	515, 668, 903, 1123, 1454
NciI	CCSGG	1 cut(s)	684
NdeI	CATATG	1 cut(s)	1395
NdeII	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
NlaIV	GGNNCC	4 cut(s)	146, 984, 1357, 1528
NmeAIII	GCCGAG	1 cut(s)	282
NmuCI	GTSAC	3 cut(s)	496, 1192, 1429
NspI	RCATGY	2 cut(s)	239, 1219
NspV	TTCGAA	2 cut(s)	64, 245
PaeI	GCATGC	1 cut(s)	239
PagI	TCATGA	2 cut(s)	298, 1384
PctI	GAATGC	3 cut(s)	60, 678, 724
PdmI	GAANNNNTTC	1 cut(s)	1076
PfeI	GAWTC	4 cut(s)	709, 1034, 1259, 1381
PflMI	CCANNNNNTGG	1 cut(s)	321
PfoI	TCCNGGA	1 cut(s)	682
PkrI	GCNGC	7 cut(s)	22, 255, 1030, 1119, 1122, 1125, 1243
PleI	GAGTC	1 cut(s)	1426
PpsI	GAGTC	1 cut(s)	1426
PshBI	ATTAAT	1 cut(s)	1296
Psp6I	CCWGG	1 cut(s)	939
PspFI	CCCAGC	1 cut(s)	539
PspGI	CCWGG	1 cut(s)	939
PspN4I	GGNNCC	4 cut(s)	146, 984, 1357, 1528
PspPI	GGNCC	3 cut(s)	119, 779, 982
PsuI	RGATCY	1 cut(s)	1477
PvuII	CAGCTG	2 cut(s)	1031, 1244
RsaI	GTAC	1 cut(s)	1528
RsaNI	GTAC	1 cut(s)	1527
RseI	CAYNNNNRTG	3 cut(s)	48, 303, 717
SaqAI	TTAA	5 cut(s)	431, 705, 1248, 1296, 1346
SatI	GCNGC	7 cut(s)	21, 254, 1029, 1118, 1121, 1124, 1242
Sau3AI	GATC	7 cut(s)	28, 229, 301, 367, 1324, 1387, 1477
Sau96I	GGNCC	3 cut(s)	119, 779, 982
SchI	GAGTC	1 cut(s)	1426
ScrFI	CCNGG	2 cut(s)	684, 941
SduI	GDGCHC	1 cut(s)	511
SfaNI	GCATC	1 cut(s)	103
SfcI	CTRYAG	1 cut(s)	1275
SfuI	TTCGAA	2 cut(s)	64, 245
SinI	GGWCC	3 cut(s)	119, 779, 982
SmiMI	CAYNNNNRTG	3 cut(s)	48, 303, 717
SmlI	CTYRAG	1 cut(s)	1521
SmoI	CTYRAG	1 cut(s)	1521
SphI	GCATGC	1 cut(s)	239
Sse9I	AATT	5 cut(s)	247, 336, 739, 1270, 1402
SsiI	CCGC	4 cut(s)	254, 884, 1286, 1377
SspMI	CTAG	3 cut(s)	276, 999, 1539
StyD4I	CCNGG	2 cut(s)	682, 939
TaaI	ACNGT	3 cut(s)	50, 444, 656
TaqI	TCGA	3 cut(s)	64, 245, 1257
TasI	AATT	5 cut(s)	247, 336, 739, 1270, 1402
TauI	GCSGC	1 cut(s)	256
TfiI	GAWTC	4 cut(s)	709, 1034, 1259, 1381
Tru1I	TTAA	5 cut(s)	431, 705, 1248, 1296, 1346
Tru9I	TTAA	5 cut(s)	431, 705, 1248, 1296, 1346
TscAI	CASTG	1 cut(s)	449
TseFI	GTSAC	3 cut(s)	496, 1192, 1429
TseI	GCWGC	6 cut(s)	20, 1028, 1117, 1120, 1123, 1241
Tsp45I	GTSAC	3 cut(s)	496, 1192, 1429
TspDTI	ATGAA	8 cut(s)	287, 300, 408, 468, 626, 1054, 1353, 1430
TspGWI	ACGGA	1 cut(s)	114
TspRI	CASTG	1 cut(s)	449
Van91I	CCANNNNNTGG	1 cut(s)	321
VpaK11BI	GGWCC	3 cut(s)	119, 779, 982
VspI	ATTAAT	1 cut(s)	1296
XapI	RAATTY	3 cut(s)	336, 739, 1270
XceI	RCATGY	2 cut(s)	239, 1219
XmnI	GAANNNNTTC	1 cut(s)	1076
XspI	CTAG	3 cut(s)	276, 999, 1539

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.