Regulator of nonsense transcripts
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G33980 AT1G33980 |
| fragaria_vesca | FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 |
| malus_domestica | MD08G1216600.v1.1 MD15G1403800.v1.1 |
| prunus_persica | Prupe.1G550000_v2.0.a1 |
| pyrus_communis | pycom08g18750 pycom15g36110 |
| rosa_chinensis | RchiOBHm_Chr6g0271031 RchiOBHm_Chr7g0229091 |
| rosa_laevigata | RLG00000001531 |
| rosa_multiflora | Rmu_sc0000271.1_g000018 |
| rosa_roxburghii | Rroxscaffold_3G00230720 |
| rosa_rugosa | Rorug07G0255600 Rorug07G0255700 Rorug07G0255700 Rorug07G0255800 Rorug07G0255900 Rorug07G0256000 |
| rosa_samantha | Rh7AG406900 Rh7BG386300 Rh7CG424600 Rh7DG400900 |
| rosa_wichuraiana | Rw7G033780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1388 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 969, 1446 |
| Acc36I | ACCTGC | 1 cut(s) | 1167 |
| Acc65I | GGTACC | 1 cut(s) | 1166 |
| AccB1I | GGYRCC | 2 cut(s) | 1166, 1538 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1226 |
| AccBSI | CCGCTC | 1 cut(s) | 557 |
| AciI | CCGC | 5 cut(s) | 103, 184, 557, 870, 1033 |
| AclWI | GGATC | 2 cut(s) | 338, 705 |
| AcoI | YGGCCR | 2 cut(s) | 319, 705 |
| AcsI | RAATTY | 4 cut(s) | 212, 987, 1005, 1142 |
| AcuI | CTGAAG | 5 cut(s) | 59, 210, 858, 1131, 1560 |
| AcyI | GRCGYC | 2 cut(s) | 964, 1037 |
| AdeI | CACNNNGTG | 1 cut(s) | 290 |
| AfaI | GTAC | 4 cut(s) | 158, 307, 623, 1168 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 478, 1056, 1226, 1400 |
| AflIII | ACRYGT | 1 cut(s) | 226 |
| AgsI | TTSAA | 9 cut(s) | 181, 259, 272, 714, 981, 1069, 1149, 1328, 1565 |
| AjnI | CCWGG | 2 cut(s) | 519, 686 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 28, 726, 758 |
| AluBI | AGCT | 6 cut(s) | 415, 440, 503, 890, 1107, 1574 |
| AluI | AGCT | 6 cut(s) | 415, 440, 503, 890, 1107, 1574 |
| Alw21I | GWGCWC | 1 cut(s) | 1109 |
| Alw26I | GTCTC | 6 cut(s) | 57, 63, 255, 610, 1044, 1084 |
| AlwI | GGATC | 2 cut(s) | 338, 705 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 779 |
| Ama87I | CYCGRG | 1 cut(s) | 162 |
| AoxI | GGCC | 4 cut(s) | 185, 319, 705, 1043 |
| ApeKI | GCWGC | 2 cut(s) | 563, 890 |
| ApoI | RAATTY | 4 cut(s) | 212, 987, 1005, 1142 |
| Asp718I | GGTACC | 1 cut(s) | 1166 |
| AspS9I | GGNCC | 5 cut(s) | 7, 516, 682, 1044, 1156 |
| AsuC2I | CCSGG | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 1 cut(s) | 28 |
| AvaI | CYCGRG | 1 cut(s) | 162 |
| AvaII | GGWCC | 4 cut(s) | 7, 516, 682, 1156 |
| BaeGI | GKGCMC | 2 cut(s) | 1465, 1543 |
| BalI | TGGCCA | 1 cut(s) | 707 |
| BanI | GGYRCC | 2 cut(s) | 1166, 1538 |
| BanII | GRGCYC | 2 cut(s) | 1109, 1240 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 605, 637, 831, 863 |
| Bbv12I | GWGCWC | 1 cut(s) | 1109 |
| BbvCI | CCTCAGC | 1 cut(s) | 996 |
| BbvI | GCAGC | 2 cut(s) | 550, 877 |
| BccI | CCATC | 6 cut(s) | 96, 215, 311, 1294, 1475, 1519 |
| BceAI | ACGGC | 2 cut(s) | 306, 1437 |
| BciT130I | CCWGG | 2 cut(s) | 521, 688 |
| BclI | TGATCA | 1 cut(s) | 933 |
| BcnI | CCSGG | 1 cut(s) | 129 |
| BcoDI | GTCTC | 6 cut(s) | 57, 63, 255, 610, 1044, 1084 |
| BfaI | CTAG | 2 cut(s) | 399, 1269 |
| BfmI | CTRYAG | 2 cut(s) | 264, 1131 |
| BfuAI | ACCTGC | 1 cut(s) | 1167 |
| BisI | GCNGC | 3 cut(s) | 185, 564, 891 |
| BlsI | GCNGC | 3 cut(s) | 186, 565, 892 |
| Bme1390I | CCNGG | 3 cut(s) | 129, 521, 688 |
| Bme18I | GGWCC | 4 cut(s) | 7, 516, 682, 1156 |
| BmeT110I | CYCGRG | 1 cut(s) | 162 |
| BmgT120I | GGNCC | 5 cut(s) | 7, 516, 682, 1044, 1156 |
| BmiI | GGNNCC | 7 cut(s) | 9, 517, 518, 684, 1168, 1239, 1540 |
| BmrFI | CCNGG | 3 cut(s) | 129, 521, 688 |
| BmrI | ACTGGG | 1 cut(s) | 1386 |
| BmsI | GCATC | 2 cut(s) | 400, 575 |
| BmuI | ACTGGG | 1 cut(s) | 1386 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 145, 177, 1082, 1114 |
| Bpu10I | CCTNAGC | 1 cut(s) | 996 |
| BpuMI | CCSGG | 1 cut(s) | 129 |
| BsaHI | GRCGYC | 2 cut(s) | 964, 1037 |
| BsaI | GGTCTC | 2 cut(s) | 255, 610 |
| BsaJI | CCNNGG | 4 cut(s) | 519, 686, 1336, 1453 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 478, 1056, 1226, 1400 |
| Bse1I | ACTGG | 3 cut(s) | 116, 708, 1381 |
| BseBI | CCWGG | 2 cut(s) | 521, 688 |
| BseDI | CCNNGG | 4 cut(s) | 519, 686, 1336, 1453 |
| BseGI | GGATG | 4 cut(s) | 322, 866, 1286, 1357 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 478, 1056, 1226, 1400 |
| BseMII | CTCAG | 5 cut(s) | 266, 600, 1010, 1035, 1536 |
| BseNI | ACTGG | 3 cut(s) | 116, 708, 1381 |
| BseRI | GAGGAG | 1 cut(s) | 1230 |
| BseSI | GKGCMC | 2 cut(s) | 1465, 1543 |
| BseXI | GCAGC | 2 cut(s) | 550, 877 |
| BsgI | GTGCAG | 1 cut(s) | 423 |
| BshFI | GGCC | 4 cut(s) | 187, 321, 707, 1045 |
| BshNI | GGYRCC | 2 cut(s) | 1166, 1538 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1109 |
| BsiHKCI | CYCGRG | 1 cut(s) | 162 |
| BsiSI | CCGG | 1 cut(s) | 128 |
| BslFI | GGGAC | 4 cut(s) | 343, 529, 668, 975 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 478, 1056, 1226, 1400 |
| BsmAI | GTCTC | 6 cut(s) | 57, 63, 255, 610, 1044, 1084 |
| BsmBI | CGTCTC | 2 cut(s) | 57, 1044 |
| BsmFI | GGGAC | 4 cut(s) | 343, 529, 668, 975 |
| BsnI | GGCC | 4 cut(s) | 187, 321, 707, 1045 |
| Bso31I | GGTCTC | 2 cut(s) | 255, 610 |
| BsoBI | CYCGRG | 1 cut(s) | 162 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1109, 1240, 1465, 1543 |
| Bsp143I | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| Bsp19I | CCATGG | 1 cut(s) | 1336 |
| BspACI | CCGC | 5 cut(s) | 103, 184, 557, 870, 1033 |
| BspANI | GGCC | 4 cut(s) | 187, 321, 707, 1045 |
| BspCNI | CTCAG | 5 cut(s) | 265, 601, 1009, 1034, 1537 |
| BspLI | GGNNCC | 7 cut(s) | 9, 517, 518, 684, 1168, 1239, 1540 |
| BspMI | ACCTGC | 1 cut(s) | 1167 |
| BspPI | GGATC | 2 cut(s) | 338, 705 |
| BspQI | GCTCTTC | 1 cut(s) | 547 |
| BspT107I | GGYRCC | 2 cut(s) | 1166, 1538 |
| BspTNI | GGTCTC | 2 cut(s) | 255, 610 |
| BsrBI | CCGCTC | 1 cut(s) | 557 |
| BsrI | ACTGG | 3 cut(s) | 116, 708, 1381 |
| BssECI | CCNNGG | 4 cut(s) | 519, 686, 1336, 1453 |
| BssMI | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| BssNI | GRCGYC | 2 cut(s) | 964, 1037 |
| BssT1I | CCWWGG | 1 cut(s) | 1336 |
| Bst2UI | CCWGG | 2 cut(s) | 521, 688 |
| Bst4CI | ACNGT | 4 cut(s) | 638, 679, 1135, 1531 |
| Bst6I | CTCTTC | 2 cut(s) | 547, 1248 |
| BstACI | GRCGYC | 2 cut(s) | 964, 1037 |
| BstC8I | GCNNGC | 1 cut(s) | 1035 |
| BstDEI | CTNAG | 8 cut(s) | 252, 609, 730, 996, 1010, 1021, 1545, 1584 |
| BstDSI | CCRYGG | 2 cut(s) | 1336, 1453 |
| BstF5I | GGATG | 4 cut(s) | 322, 866, 1286, 1357 |
| BstKTI | GATC | 5 cut(s) | 70, 346, 700, 936, 1225 |
| BstMAI | GTCTC | 6 cut(s) | 57, 63, 255, 610, 1044, 1084 |
| BstMBI | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 388, 437, 446, 563, 1291 |
| BstNI | CCWGG | 2 cut(s) | 521, 688 |
| BstNSI | RCATGY | 2 cut(s) | 230, 1268 |
| BstSCI | CCNGG | 3 cut(s) | 127, 519, 686 |
| BstSFI | CTRYAG | 2 cut(s) | 264, 1131 |
| BstSLI | GKGCMC | 2 cut(s) | 1465, 1543 |
| BstV1I | GCAGC | 2 cut(s) | 550, 877 |
| BstX2I | RGATCY | 1 cut(s) | 343 |
| BstYI | RGATCY | 1 cut(s) | 343 |
| BsuRI | GGCC | 4 cut(s) | 187, 321, 707, 1045 |
| BtgI | CCRYGG | 2 cut(s) | 1336, 1453 |
| BtsCI | GGATG | 4 cut(s) | 322, 866, 1286, 1357 |
| BtsIMutI | CAGTG | 2 cut(s) | 643, 675 |
| BveI | ACCTGC | 1 cut(s) | 1167 |
| Cac8I | GCNNGC | 1 cut(s) | 1035 |
| CaiI | CAGNNNCTG | 1 cut(s) | 779 |
| Cfr13I | GGNCC | 5 cut(s) | 7, 516, 682, 1044, 1156 |
| CseI | GACGC | 2 cut(s) | 972, 1026 |
| Csp6I | GTAC | 4 cut(s) | 157, 306, 622, 1167 |
| CviAII | CATG | 8 cut(s) | 227, 303, 478, 1163, 1265, 1337, 1418, 1535 |
| CviQI | GTAC | 4 cut(s) | 157, 306, 622, 1167 |
| DdeI | CTNAG | 8 cut(s) | 252, 609, 730, 996, 1010, 1021, 1545, 1584 |
| DpnI | GATC | 5 cut(s) | 69, 345, 699, 935, 1224 |
| DpnII | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| DraI | TTTAAA | 1 cut(s) | 951 |
| DraIII | CACNNNGTG | 1 cut(s) | 290 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 969, 1446 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 969, 1446 |
| EaeI | YGGCCR | 2 cut(s) | 319, 705 |
| Eam1104I | CTCTTC | 2 cut(s) | 547, 1248 |
| EarI | CTCTTC | 2 cut(s) | 547, 1248 |
| Ecl136II | GAGCTC | 1 cut(s) | 1107 |
| Eco130I | CCWWGG | 1 cut(s) | 1336 |
| Eco24I | GRGCYC | 2 cut(s) | 1109, 1240 |
| Eco31I | GGTCTC | 2 cut(s) | 255, 610 |
| Eco47I | GGWCC | 4 cut(s) | 7, 516, 682, 1156 |
| Eco53kI | GAGCTC | 1 cut(s) | 1107 |
| Eco57I | CTGAAG | 5 cut(s) | 59, 210, 858, 1131, 1560 |
| Eco88I | CYCGRG | 1 cut(s) | 162 |
| EcoICRI | GAGCTC | 1 cut(s) | 1107 |
| EcoO109I | RGGNCCY | 3 cut(s) | 7, 516, 1156 |
| EcoRI | GAATTC | 1 cut(s) | 212 |
| EcoRII | CCWGG | 2 cut(s) | 519, 686 |
| EcoT14I | CCWWGG | 1 cut(s) | 1336 |
| EcoT38I | GRGCYC | 2 cut(s) | 1109, 1240 |
| ErhI | CCWWGG | 1 cut(s) | 1336 |
| Esp3I | CGTCTC | 2 cut(s) | 57, 1044 |
| FaeI | CATG | 8 cut(s) | 230, 306, 481, 1166, 1268, 1340, 1421, 1538 |
| FaqI | GGGAC | 4 cut(s) | 343, 529, 668, 975 |
| FatI | CATG | 8 cut(s) | 226, 302, 477, 1162, 1264, 1336, 1417, 1534 |
| FauI | CCCGC | 2 cut(s) | 550, 1026 |
| FbaI | TGATCA | 1 cut(s) | 933 |
| Fnu4HI | GCNGC | 3 cut(s) | 185, 564, 891 |
| FokI | GGATG | 4 cut(s) | 329, 853, 1273, 1364 |
| FriOI | GRGCYC | 2 cut(s) | 1109, 1240 |
| Fsp4HI | GCNGC | 3 cut(s) | 185, 564, 891 |
| FspBI | CTAG | 2 cut(s) | 399, 1269 |
| GluI | GCNGC | 3 cut(s) | 185, 564, 891 |
| HaeIII | GGCC | 4 cut(s) | 187, 321, 707, 1045 |
| HapII | CCGG | 1 cut(s) | 128 |
| HgaI | GACGC | 2 cut(s) | 972, 1026 |
| Hin1I | GRCGYC | 2 cut(s) | 964, 1037 |
| Hin1II | CATG | 8 cut(s) | 230, 306, 481, 1166, 1268, 1340, 1421, 1538 |
| HincII | GTYRAC | 1 cut(s) | 669 |
| HindII | GTYRAC | 1 cut(s) | 669 |
| HinfI | GANTC | 4 cut(s) | 148, 759, 776, 1319 |
| HpaII | CCGG | 1 cut(s) | 128 |
| HphI | GGTGA | 1 cut(s) | 28 |
| Hpy166II | GTNNAC | 4 cut(s) | 669, 1262, 1403, 1433 |
| Hpy188III | TCNNGA | 5 cut(s) | 162, 347, 756, 780, 836 |
| Hpy8I | GTNNAC | 4 cut(s) | 669, 1262, 1403, 1433 |
| Hpy99I | CGWCG | 1 cut(s) | 1251 |
| HpyCH4III | ACNGT | 4 cut(s) | 638, 679, 1135, 1531 |
| HpyCH4IV | ACGT | 4 cut(s) | 580, 1026, 1300, 1405 |
| HpyCH4V | TGCA | 7 cut(s) | 278, 404, 449, 566, 773, 1055, 1162 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 388, 437, 446, 563, 1291 |
| HpyF3I | CTNAG | 8 cut(s) | 252, 609, 730, 996, 1010, 1021, 1545, 1584 |
| HpySE526I | ACGT | 4 cut(s) | 580, 1026, 1300, 1405 |
| Hsp92I | GRCGYC | 2 cut(s) | 964, 1037 |
| Hsp92II | CATG | 8 cut(s) | 230, 306, 481, 1166, 1268, 1340, 1421, 1538 |
| KflI | GGGWCCC | 1 cut(s) | 516 |
| KpnI | GGTACC | 1 cut(s) | 1170 |
| Ksp22I | TGATCA | 1 cut(s) | 933 |
| Kzo9I | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| LguI | GCTCTTC | 1 cut(s) | 547 |
| LmnI | GCTCC | 3 cut(s) | 838, 898, 1243 |
| Lsp1109I | GCAGC | 2 cut(s) | 550, 877 |
| LweI | GCATC | 2 cut(s) | 400, 575 |
| MaeI | CTAG | 2 cut(s) | 399, 1269 |
| MaeII | ACGT | 4 cut(s) | 580, 1026, 1300, 1405 |
| MaeIII | GTNAC | 1 cut(s) | 862 |
| MalI | GATC | 5 cut(s) | 69, 345, 699, 935, 1224 |
| MbiI | CCGCTC | 1 cut(s) | 557 |
| MboI | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| MboII | GAAGA | 8 cut(s) | 157, 203, 386, 561, 564, 625, 799, 1235 |
| MfeI | CAATTG | 1 cut(s) | 701 |
| MflI | RGATCY | 1 cut(s) | 343 |
| MhlI | GDGCHC | 4 cut(s) | 1109, 1240, 1465, 1543 |
| MlsI | TGGCCA | 1 cut(s) | 707 |
| MluCI | AATT | 6 cut(s) | 212, 701, 741, 987, 1005, 1142 |
| MluNI | TGGCCA | 1 cut(s) | 707 |
| MlyI | GAGTC | 1 cut(s) | 770 |
| Mox20I | TGGCCA | 1 cut(s) | 707 |
| MscI | TGGCCA | 1 cut(s) | 707 |
| MseI | TTAA | 6 cut(s) | 237, 573, 629, 804, 950, 1029 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1269 |
| Msp20I | TGGCCA | 1 cut(s) | 707 |
| MspA1I | CMGCKG | 3 cut(s) | 415, 872, 890 |
| MspI | CCGG | 1 cut(s) | 128 |
| MspR9I | CCNGG | 3 cut(s) | 129, 521, 688 |
| MunI | CAATTG | 1 cut(s) | 701 |
| MvaI | CCWGG | 2 cut(s) | 521, 688 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 388, 437, 446, 563, 1291 |
| NciI | CCSGG | 1 cut(s) | 129 |
| NcoI | CCATGG | 1 cut(s) | 1336 |
| NdeII | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| NlaIII | CATG | 8 cut(s) | 230, 306, 481, 1166, 1268, 1340, 1421, 1538 |
| NlaIV | GGNNCC | 7 cut(s) | 9, 517, 518, 684, 1168, 1239, 1540 |
| NmeAIII | GCCGAG | 1 cut(s) | 1021 |
| NspI | RCATGY | 2 cut(s) | 230, 1268 |
| PaeR7I | CTCGAG | 1 cut(s) | 162 |
| PciI | ACATGT | 1 cut(s) | 226 |
| PciSI | GCTCTTC | 1 cut(s) | 547 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 496 |
| PfeI | GAWTC | 3 cut(s) | 148, 759, 1319 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1226 |
| PfoI | TCCNGGA | 1 cut(s) | 127 |
| PkrI | GCNGC | 3 cut(s) | 186, 565, 892 |
| PleI | GAGTC | 1 cut(s) | 770 |
| PpsI | GAGTC | 1 cut(s) | 770 |
| PpuMI | RGGWCCY | 3 cut(s) | 7, 516, 1156 |
| PscI | ACATGT | 1 cut(s) | 226 |
| PsiI | TTATAA | 1 cut(s) | 1388 |
| Psp124BI | GAGCTC | 1 cut(s) | 1109 |
| Psp5II | RGGWCCY | 3 cut(s) | 7, 516, 1156 |
| Psp6I | CCWGG | 2 cut(s) | 519, 686 |
| PspGI | CCWGG | 2 cut(s) | 519, 686 |
| PspN4I | GGNNCC | 7 cut(s) | 9, 517, 518, 684, 1168, 1239, 1540 |
| PspPI | GGNCC | 5 cut(s) | 7, 516, 682, 1044, 1156 |
| PspPPI | RGGWCCY | 3 cut(s) | 7, 516, 1156 |
| PstNI | CAGNNNCTG | 1 cut(s) | 779 |
| PsuI | RGATCY | 1 cut(s) | 343 |
| PvuII | CAGCTG | 2 cut(s) | 415, 890 |
| RsaI | GTAC | 4 cut(s) | 158, 307, 623, 1168 |
| RsaNI | GTAC | 4 cut(s) | 157, 306, 622, 1167 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1269 |
| SacI | GAGCTC | 1 cut(s) | 1109 |
| SapI | GCTCTTC | 1 cut(s) | 547 |
| SaqAI | TTAA | 6 cut(s) | 237, 573, 629, 804, 950, 1029 |
| SatI | GCNGC | 3 cut(s) | 185, 564, 891 |
| Sau3AI | GATC | 5 cut(s) | 67, 343, 697, 933, 1222 |
| Sau96I | GGNCC | 5 cut(s) | 7, 516, 682, 1044, 1156 |
| SchI | GAGTC | 1 cut(s) | 770 |
| ScrFI | CCNGG | 3 cut(s) | 129, 521, 688 |
| SduI | GDGCHC | 4 cut(s) | 1109, 1240, 1465, 1543 |
| SfaNI | GCATC | 2 cut(s) | 400, 575 |
| SfcI | CTRYAG | 2 cut(s) | 264, 1131 |
| Sfr274I | CTCGAG | 1 cut(s) | 162 |
| SinI | GGWCC | 4 cut(s) | 7, 516, 682, 1156 |
| SlaI | CTCGAG | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1269 |
| SmlI | CTYRAG | 1 cut(s) | 162 |
| SmoI | CTYRAG | 1 cut(s) | 162 |
| Sse9I | AATT | 6 cut(s) | 212, 701, 741, 987, 1005, 1142 |
| SsiI | CCGC | 5 cut(s) | 103, 184, 557, 870, 1033 |
| SspMI | CTAG | 2 cut(s) | 399, 1269 |
| SstI | GAGCTC | 1 cut(s) | 1109 |
| StyD4I | CCNGG | 3 cut(s) | 127, 519, 686 |
| StyI | CCWWGG | 1 cut(s) | 1336 |
| TaaI | ACNGT | 4 cut(s) | 638, 679, 1135, 1531 |
| TaiI | ACGT | 4 cut(s) | 583, 1029, 1303, 1408 |
| TaqI | TCGA | 4 cut(s) | 84, 163, 201, 655 |
| TasI | AATT | 6 cut(s) | 212, 701, 741, 987, 1005, 1142 |
| TatI | WGTACW | 1 cut(s) | 621 |
| TauI | GCSGC | 1 cut(s) | 187 |
| TfiI | GAWTC | 3 cut(s) | 148, 759, 1319 |
| Tru1I | TTAA | 6 cut(s) | 237, 573, 629, 804, 950, 1029 |
| Tru9I | TTAA | 6 cut(s) | 237, 573, 629, 804, 950, 1029 |
| TscAI | CASTG | 2 cut(s) | 643, 682 |
| TseI | GCWGC | 2 cut(s) | 563, 890 |
| TspDTI | ATGAA | 5 cut(s) | 17, 516, 753, 1505, 1523 |
| TspGWI | ACGGA | 3 cut(s) | 39, 113, 1279 |
| TspRI | CASTG | 2 cut(s) | 643, 682 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1226 |
| VpaK11BI | GGWCC | 4 cut(s) | 7, 516, 682, 1156 |
| XapI | RAATTY | 4 cut(s) | 212, 987, 1005, 1142 |
| XceI | RCATGY | 2 cut(s) | 230, 1268 |
| XhoI | CTCGAG | 1 cut(s) | 162 |
| XspI | CTAG | 2 cut(s) | 399, 1269 |