Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003905

Physical Location & Seq

Genomic Coordinates Forward (+)

17129487 .. 17135738

Gene Structure 6252 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001531

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGAAGGACCCCTCGGTGAGGACGAAGGTGTTAGTTCGTCACCTGCCTCCGTCTCTGTCTCAGTCCGATTTCTTTCAGCAAATCGACCACCTCTTCGGTGACCGCCACAACTGGTTTTGCTTCCGTCCCGGAAAGAATAGCCATAAGCATCAGAGGTATTCTCGAGCCTACATTGAATTTAAGCGACCTGAAGATGTTTTTGAGTTTGCGGAATTCTTTGACGGTCATGTATTTGTTAATGAGAAAGGGACTCAGTTCAAGTCTATAGTTGAATATGCACCTTCACAGCGTGTTCCCAAGCCTAGTAACAAAAAGGATGGTCGTGAAGGGACTATATATAAAGATCCTGATTATTTGGAGTTCCTGAAACATATTGCAAAGCCTGCTGAGCATCTTCCTAGTGCAGAAATACAGCTGGAAAGAAAGGAAGCTGAACAAGCTGGTGCTGCAAAAGAAGCTCCTATTGTTACACCCCTGATGGAGTATGTTCGTCAGAAACGAGCTATCGGAAGTGGAACCCAGATCTCATCAGTTGTTCGGAAGGTGAGAAGAAGAACTGGGGCCACATCTTTTAGCAAACGTGGCTCAACTTCTACAAAACGAGTCTCTGAGAAGAAAAAGTACATATTAAAGGATGCAGCTAAATATACTAGTAGAAAGGACAGGTCAACTTTCAATTTGGTGCCCAGGCGAGAGGATCAGTTGGCTAGTTCAAGTGGAAAAGATACGATGGGAAATGAAATTGGTTCTGTTTCGGGAATCCCTGTGATTGCAGACTCTGGAAGGACAAAAATCCTACTTAAGCGGGAAATACCTCCTGCTCCTGAAGGTATGCCACAACATCAGGCATCCATAGGAAGTTCTCCTGTTTCAGCTGCTCCAAAGCAGAACCAAAGGCGTGATGCTAGTGGAAGATTTCTCAGAAGCATACTTTCACATAATGAGGGACGCCAAAGAGAAGCTTCTGCTGAAGTTCAGTCTCAGCAGAAAATCCTGGGTCCGAACTCGGACATTAAGCGTGTGTCGCGACCATCCAATACACGGTTAGTGTTGAATAATGAACCTAATTCAATGAGCTCTGAAGGGGACAGAAGGAGGGCTACAGTCGATAAATTTACGAAGAAGGACGTGCATGGTACAACTAACGTTAGTGAGAAGCAAGACAAGCATACAAGAAACAAGGATAGACCAGATCGTGGTGTTTGGACTCCTCTTCGTCGTGCTGAGAGTTCCCATGCTAGTGATGAGCACTTGTCATCCTCAGCTTCACAACGACCTCAACTGCTATCTGATTCAGTTGAAGTTCCCCATGGAGAAGTGAAAGCTGACACATCTTATGGAAGCAGGACTGGGGAAGTTATAACTTCCACAGGTGGGCGTAGTCTTACTCATGTAGACAATGGTCCCCATCGACATTTTGGTCGCCGTGGAACTGCCCCTAGTACGAAAGATGATGGCTCTCTAAATATAAGTGAGGGGAAGTCATCTAAAAGAGGTGCTGCTGTTCATGGTGCCCCTGAGAAACAAGTGTGGGTTCAGAAATCATCTTCCGGTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000956 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010605 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0023052 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0034655 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046677 GO:0046700 GO:0048519 GO:0048571 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 map03013 map03015

Pfam Domains

Protein Families

Smg4_UPF3

Protein Analysis

520

Amino Acids

57.81

Weight (kDa)

10.05

Isoelectric Point (pI)

53.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Smg4_UPF3	PF03467	7 - 168	3.6e-56	Smg-4/UPF3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33980 AT1G33980
fragaria_vesca	FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510
malus_domestica	MD08G1216600.v1.1 MD15G1403800.v1.1
prunus_persica	Prupe.1G550000_v2.0.a1
pyrus_communis	pycom08g18750 pycom15g36110
rosa_chinensis	RchiOBHm_Chr6g0271031 RchiOBHm_Chr7g0229091
rosa_laevigata	RLG00000001531
rosa_multiflora	Rmu_sc0000271.1_g000018
rosa_roxburghii	Rroxscaffold_3G00230720
rosa_rugosa	Rorug07G0255600 Rorug07G0255700 Rorug07G0255700 Rorug07G0255800 Rorug07G0255900 Rorug07G0256000
rosa_samantha	Rh7AG406900 Rh7BG386300 Rh7CG424600 Rh7DG400900
rosa_wichuraiana	Rw7G033780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1361
AarI	CACCTGC	1 cut(s)	51
AasI	GACNNNNNNGTC	1 cut(s)	1419
Acc36I	ACCTGC	1 cut(s)	51
AccB1I	GGYRCC	2 cut(s)	682, 1511
AccB7I	CCANNNNNTGG	1 cut(s)	1196
AccI	GTMKAC	1 cut(s)	1395
AccII	CGCG	1 cut(s)	1027
AciI	CCGC	3 cut(s)	103, 209, 805
AclI	AACGTT	1 cut(s)	1146
AclWI	GGATC	2 cut(s)	338, 705
AcsI	RAATTY	3 cut(s)	176, 212, 1112
AcuI	CTGAAG	4 cut(s)	210, 846, 990, 1101
AcyI	GRCGYC	1 cut(s)	949
AdeI	CACNNNGTG	1 cut(s)	290
AfaI	GTAC	3 cut(s)	623, 1138, 1444
AfiI	CCNNNNNNNGG	4 cut(s)	18, 1041, 1196, 1374
AflII	CTTAAG	1 cut(s)	800
AgsI	TTSAA	8 cut(s)	176, 259, 272, 676, 714, 1054, 1071, 1301
AhlI	ACTAGT	1 cut(s)	650
AjiI	CACGTC	1 cut(s)	1129
AjnI	CCWGG	2 cut(s)	686, 993
Alw21I	GWGCWC	2 cut(s)	1079, 1251
Alw26I	GTCTC	4 cut(s)	57, 63, 610, 984
AlwI	GGATC	2 cut(s)	338, 705
AlwNI	CAGNNNCTG	1 cut(s)	779
Ama87I	CYCGRG	1 cut(s)	162
AoxI	GGCC	1 cut(s)	561
ApeKI	GCWGC	4 cut(s)	446, 638, 875, 1499
ApoI	RAATTY	3 cut(s)	176, 212, 1112
ArsI	GACNNNNNNTTYG	2 cut(s)	77, 109
AspS9I	GGNCC	4 cut(s)	7, 561, 998, 1403
AsuC2I	CCSGG	1 cut(s)	129
AsuHPI	GGTGA	4 cut(s)	28, 32, 110, 556
AvaI	CYCGRG	1 cut(s)	162
AvaII	GGWCC	3 cut(s)	7, 998, 1403
BaeGI	GKGCMC	2 cut(s)	687, 1516
BanI	GGYRCC	2 cut(s)	682, 1511
BanII	GRGCYC	1 cut(s)	1079
BarI	GAAGNNNNNNTAC	4 cut(s)	605, 637, 1084, 1116
Bbv12I	GWGCWC	2 cut(s)	1079, 1251
BbvCI	CCTCAGC	1 cut(s)	1261
BbvI	GCAGC	4 cut(s)	433, 650, 862, 1486
BccI	CCATC	6 cut(s)	311, 472, 724, 1039, 1416, 1448
BceAI	ACGGC	1 cut(s)	1410
BciT130I	CCWGG	2 cut(s)	688, 995
BcnI	CCSGG	1 cut(s)	129
BcoDI	GTCTC	4 cut(s)	57, 63, 610, 984
BcuI	ACTAGT	1 cut(s)	650
BfaI	CTAG	7 cut(s)	303, 399, 651, 708, 906, 1239, 1440
BfmI	CTRYAG	2 cut(s)	264, 1101
BfrI	CTTAAG	1 cut(s)	800
BfuAI	ACCTGC	1 cut(s)	51
BglII	AGATCT	1 cut(s)	522
BisI	GCNGC	4 cut(s)	447, 639, 876, 1500
BlpI	GCTNAGC	1 cut(s)	387
BlsI	GCNGC	4 cut(s)	448, 640, 877, 1501
Bme1390I	CCNGG	3 cut(s)	129, 688, 995
Bme18I	GGWCC	3 cut(s)	7, 998, 1403
BmeT110I	CYCGRG	1 cut(s)	162
BmgBI	CACGTC	1 cut(s)	1129
BmgT120I	GGNCC	4 cut(s)	7, 561, 998, 1403
BmiI	GGNNCC	7 cut(s)	9, 517, 562, 684, 999, 1405, 1513
BmrFI	CCNGG	3 cut(s)	129, 688, 995
BmrI	ACTGGG	2 cut(s)	567, 1359
BmsI	GCATC	5 cut(s)	157, 400, 625, 857, 892
BmuI	ACTGGG	2 cut(s)	567, 1359
BoxI	GACNNNNGTC	1 cut(s)	1401
BplI	GAGNNNNNCTC	2 cut(s)	145, 177
Bpu10I	CCTNAGC	1 cut(s)	1261
Bpu1102I	GCTNAGC	1 cut(s)	387
BpuMI	CCSGG	1 cut(s)	129
BsaHI	GRCGYC	1 cut(s)	949
BsaJI	CCNNGG	5 cut(s)	12, 686, 994, 1309, 1426
BsaWI	WCCGGW	1 cut(s)	1550
Bsc4I	CCNNNNNNNGG	4 cut(s)	18, 1041, 1196, 1374
Bse1I	ACTGG	3 cut(s)	116, 562, 1354
BseBI	CCWGG	2 cut(s)	688, 995
BseDI	CCNNGG	5 cut(s)	12, 686, 994, 1309, 1426
BseGI	GGATG	5 cut(s)	322, 640, 848, 1031, 1256
BseLI	CCNNNNNNNGG	4 cut(s)	18, 1041, 1196, 1374
BseMII	CTCAG	9 cut(s)	74, 266, 378, 600, 934, 995, 1215, 1275, 1509
BseNI	ACTGG	3 cut(s)	116, 562, 1354
BseRI	GAGGAG	1 cut(s)	1200
BseSI	GKGCMC	2 cut(s)	687, 1516
BseXI	GCAGC	4 cut(s)	433, 650, 862, 1486
BsgI	GTGCAG	1 cut(s)	423
Bsh1236I	CGCG	1 cut(s)	1027
BshFI	GGCC	1 cut(s)	563
BshNI	GGYRCC	2 cut(s)	682, 1511
BsiHKAI	GWGCWC	2 cut(s)	1079, 1251
BsiHKCI	CYCGRG	1 cut(s)	162
BsiSI	CCGG	2 cut(s)	129, 1551
BslFI	GGGAC	6 cut(s)	111, 262, 343, 960, 1100, 1389
BslI	CCNNNNNNNGG	4 cut(s)	18, 1041, 1196, 1374
BsmAI	GTCTC	4 cut(s)	57, 63, 610, 984
BsmBI	CGTCTC	1 cut(s)	57
BsmFI	GGGAC	6 cut(s)	111, 262, 343, 960, 1100, 1389
BsnI	GGCC	1 cut(s)	563
BsoBI	CYCGRG	1 cut(s)	162
Bsp1286I	GDGCHC	4 cut(s)	687, 1079, 1251, 1516
Bsp143I	GATC	4 cut(s)	343, 522, 697, 1192
Bsp1720I	GCTNAGC	1 cut(s)	387
Bsp19I	CCATGG	1 cut(s)	1309
Bsp68I	TCGCGA	1 cut(s)	1027
BspACI	CCGC	3 cut(s)	103, 209, 805
BspANI	GGCC	1 cut(s)	563
BspCNI	CTCAG	9 cut(s)	73, 265, 379, 601, 933, 994, 1216, 1274, 1510
BspFNI	CGCG	1 cut(s)	1027
BspLI	GGNNCC	7 cut(s)	9, 517, 562, 684, 999, 1405, 1513
BspMI	ACCTGC	1 cut(s)	51
BspPI	GGATC	2 cut(s)	338, 705
BspT107I	GGYRCC	2 cut(s)	682, 1511
BspTI	CTTAAG	1 cut(s)	800
BsrI	ACTGG	3 cut(s)	116, 562, 1354
BssECI	CCNNGG	5 cut(s)	12, 686, 994, 1309, 1426
BssMI	GATC	4 cut(s)	343, 522, 697, 1192
BssNI	GRCGYC	1 cut(s)	949
BssT1I	CCWWGG	1 cut(s)	1309
Bst2UI	CCWGG	2 cut(s)	688, 995
Bst4CI	ACNGT	3 cut(s)	224, 1044, 1105
Bst6I	CTCTTC	2 cut(s)	98, 1218
BstACI	GRCGYC	1 cut(s)	949
BstAFI	CTTAAG	1 cut(s)	800
BstAPI	GCANNNNNTGC	1 cut(s)	383
BstC8I	GCNNGC	1 cut(s)	384
BstDEI	CTNAG	9 cut(s)	60, 252, 387, 609, 920, 981, 1224, 1261, 1518
BstDSI	CCRYGG	2 cut(s)	1309, 1426
BstEII	GGTNACC	1 cut(s)	98
BstENI	CCTNNNNNAGG	1 cut(s)	16
BstF5I	GGATG	5 cut(s)	322, 640, 848, 1031, 1256
BstFNI	CGCG	1 cut(s)	1027
BstKTI	GATC	4 cut(s)	346, 525, 700, 1195
BstMAI	GTCTC	4 cut(s)	57, 63, 610, 984
BstMBI	GATC	4 cut(s)	343, 522, 697, 1192
BstMWI	GCNNNNNNNGC	8 cut(s)	383, 388, 437, 446, 455, 582, 1024, 1165
BstNI	CCWGG	2 cut(s)	688, 995
BstPAI	GACNNNNGTC	1 cut(s)	1401
BstPI	GGTNACC	1 cut(s)	98
BstSCI	CCNGG	3 cut(s)	127, 686, 993
BstSFI	CTRYAG	2 cut(s)	264, 1101
BstSLI	GKGCMC	2 cut(s)	687, 1516
BstUI	CGCG	1 cut(s)	1027
BstV1I	GCAGC	4 cut(s)	433, 650, 862, 1486
BstX2I	RGATCY	2 cut(s)	343, 522
BstYI	RGATCY	2 cut(s)	343, 522
BsuRI	GGCC	1 cut(s)	563
BtgI	CCRYGG	2 cut(s)	1309, 1426
BtrI	CACGTC	1 cut(s)	1129
BtsCI	GGATG	5 cut(s)	322, 640, 848, 1031, 1256
BtuMI	TCGCGA	1 cut(s)	1027
BveI	ACCTGC	1 cut(s)	51
Cac8I	GCNNGC	1 cut(s)	384
CaiI	CAGNNNCTG	1 cut(s)	779
Cfr13I	GGNCC	4 cut(s)	7, 561, 998, 1403
CseI	GACGC	1 cut(s)	957
Csp6I	GTAC	3 cut(s)	622, 1137, 1443
CviAII	CATG	6 cut(s)	227, 1133, 1235, 1310, 1391, 1508
CviQI	GTAC	3 cut(s)	622, 1137, 1443
DdeI	CTNAG	9 cut(s)	60, 252, 387, 609, 920, 981, 1224, 1261, 1518
DpnI	GATC	4 cut(s)	345, 524, 699, 1194
DpnII	GATC	4 cut(s)	343, 522, 697, 1192
DraIII	CACNNNGTG	1 cut(s)	290
DrdI	GACNNNNNNGTC	1 cut(s)	1419
DseDI	GACNNNNNNGTC	1 cut(s)	1419
Eam1104I	CTCTTC	2 cut(s)	98, 1218
EarI	CTCTTC	2 cut(s)	98, 1218
Ecl136II	GAGCTC	1 cut(s)	1077
Eco130I	CCWWGG	1 cut(s)	1309
Eco24I	GRGCYC	1 cut(s)	1079
Eco47I	GGWCC	3 cut(s)	7, 998, 1403
Eco53kI	GAGCTC	1 cut(s)	1077
Eco57I	CTGAAG	4 cut(s)	210, 846, 990, 1101
Eco88I	CYCGRG	1 cut(s)	162
Eco91I	GGTNACC	1 cut(s)	98
EcoICRI	GAGCTC	1 cut(s)	1077
EcoNI	CCTNNNNNAGG	1 cut(s)	16
EcoO109I	RGGNCCY	1 cut(s)	7
EcoO65I	GGTNACC	1 cut(s)	98
EcoRI	GAATTC	1 cut(s)	212
EcoRII	CCWGG	2 cut(s)	686, 993
EcoT14I	CCWWGG	1 cut(s)	1309
EcoT38I	GRGCYC	1 cut(s)	1079
ErhI	CCWWGG	1 cut(s)	1309
Esp3I	CGTCTC	1 cut(s)	57
FaeI	CATG	6 cut(s)	230, 1136, 1238, 1313, 1394, 1511
FalI	AAGNNNNNCTT	2 cut(s)	946, 978
FaqI	GGGAC	6 cut(s)	111, 262, 343, 960, 1100, 1389
FatI	CATG	6 cut(s)	226, 1132, 1234, 1309, 1390, 1507
FauI	CCCGC	1 cut(s)	798
FblI	GTMKAC	1 cut(s)	1395
Fnu4HI	GCNGC	4 cut(s)	447, 639, 876, 1500
FokI	GGATG	5 cut(s)	329, 647, 835, 1018, 1243
FriOI	GRGCYC	1 cut(s)	1079
Fsp4HI	GCNGC	4 cut(s)	447, 639, 876, 1500
FspBI	CTAG	7 cut(s)	303, 399, 651, 708, 906, 1239, 1440
GluI	GCNGC	4 cut(s)	447, 639, 876, 1500
HaeIII	GGCC	1 cut(s)	563
HapII	CCGG	2 cut(s)	129, 1551
HgaI	GACGC	1 cut(s)	957
Hin1I	GRCGYC	1 cut(s)	949
Hin1II	CATG	6 cut(s)	230, 1136, 1238, 1313, 1394, 1511
HincII	GTYRAC	1 cut(s)	669
HindII	GTYRAC	1 cut(s)	669
HindIII	AAGCTT	1 cut(s)	960
HinfI	GANTC	6 cut(s)	250, 603, 759, 776, 1207, 1292
HpaII	CCGG	2 cut(s)	129, 1551
HphI	GGTGA	4 cut(s)	28, 32, 110, 556
Hpy166II	GTNNAC	2 cut(s)	669, 1396
Hpy188III	TCNNGA	8 cut(s)	162, 323, 347, 364, 756, 780, 824, 1026
Hpy8I	GTNNAC	2 cut(s)	669, 1396
Hpy99I	CGWCG	1 cut(s)	1221
HpyAV	CCTTC	9 cut(s)	19, 291, 320, 535, 777, 821, 1076, 1086, 1117
HpyCH4III	ACNGT	3 cut(s)	224, 1044, 1105
HpyCH4IV	ACGT	3 cut(s)	580, 1128, 1146
HpyCH4V	TGCA	7 cut(s)	278, 377, 404, 449, 638, 773, 1132
HpyF10VI	GCNNNNNNNGC	8 cut(s)	383, 388, 437, 446, 455, 582, 1024, 1165
HpyF3I	CTNAG	9 cut(s)	60, 252, 387, 609, 920, 981, 1224, 1261, 1518
HpySE526I	ACGT	3 cut(s)	580, 1128, 1146
Hsp92I	GRCGYC	1 cut(s)	949
Hsp92II	CATG	6 cut(s)	230, 1136, 1238, 1313, 1394, 1511
Kzo9I	GATC	4 cut(s)	343, 522, 697, 1192
LmnI	GCTCC	3 cut(s)	463, 826, 883
Lsp1109I	GCAGC	4 cut(s)	433, 650, 862, 1486
LweI	GCATC	5 cut(s)	157, 400, 625, 857, 892
MaeI	CTAG	7 cut(s)	303, 399, 651, 708, 906, 1239, 1440
MaeII	ACGT	3 cut(s)	580, 1128, 1146
MaeIII	GTNAC	4 cut(s)	38, 98, 305, 466
MalI	GATC	4 cut(s)	345, 524, 699, 1194
MboI	GATC	4 cut(s)	343, 522, 697, 1192
MflI	RGATCY	2 cut(s)	343, 522
MhlI	GDGCHC	4 cut(s)	687, 1079, 1251, 1516
MluCI	AATT	6 cut(s)	176, 212, 676, 741, 1066, 1112
MlyI	GAGTC	4 cut(s)	244, 612, 770, 1201
MseI	TTAA	5 cut(s)	180, 237, 629, 801, 1014
MslI	CAYNNNNRTG	1 cut(s)	1239
MspA1I	CMGCKG	2 cut(s)	415, 875
MspCI	CTTAAG	1 cut(s)	800
MspI	CCGG	2 cut(s)	129, 1551
MspR9I	CCNGG	3 cut(s)	129, 688, 995
MvaI	CCWGG	2 cut(s)	688, 995
MvnI	CGCG	1 cut(s)	1027
MwoI	GCNNNNNNNGC	8 cut(s)	383, 388, 437, 446, 455, 582, 1024, 1165
NciI	CCSGG	1 cut(s)	129
NcoI	CCATGG	1 cut(s)	1309
NdeII	GATC	4 cut(s)	343, 522, 697, 1192
NlaIII	CATG	6 cut(s)	230, 1136, 1238, 1313, 1394, 1511
NlaIV	GGNNCC	7 cut(s)	9, 517, 562, 684, 999, 1405, 1513
NmuCI	GTSAC	2 cut(s)	38, 98
NruI	TCGCGA	1 cut(s)	1027
PaeR7I	CTCGAG	1 cut(s)	162
PaqCI	CACCTGC	1 cut(s)	51
PcsI	WCGNNNNNNNCGW	2 cut(s)	20, 496
PfeI	GAWTC	2 cut(s)	759, 1292
PflMI	CCANNNNNTGG	1 cut(s)	1196
PfoI	TCCNGGA	1 cut(s)	127
PkrI	GCNGC	4 cut(s)	448, 640, 877, 1501
PleI	GAGTC	4 cut(s)	244, 611, 770, 1201
PpsI	GAGTC	4 cut(s)	244, 611, 770, 1201
PpuMI	RGGWCCY	1 cut(s)	7
PshAI	GACNNNNGTC	1 cut(s)	1401
PsiI	TTATAA	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	1079
Psp1406I	AACGTT	1 cut(s)	1146
Psp5II	RGGWCCY	1 cut(s)	7
Psp6I	CCWGG	2 cut(s)	686, 993
PspEI	GGTNACC	1 cut(s)	98
PspGI	CCWGG	2 cut(s)	686, 993
PspN4I	GGNNCC	7 cut(s)	9, 517, 562, 684, 999, 1405, 1513
PspPI	GGNCC	4 cut(s)	7, 561, 998, 1403
PspPPI	RGGWCCY	1 cut(s)	7
PstNI	CAGNNNCTG	1 cut(s)	779
PsuI	RGATCY	2 cut(s)	343, 522
PvuII	CAGCTG	2 cut(s)	415, 875
RruI	TCGCGA	1 cut(s)	1027
RsaI	GTAC	3 cut(s)	623, 1138, 1444
RsaNI	GTAC	3 cut(s)	622, 1137, 1443
RseI	CAYNNNNRTG	1 cut(s)	1239
SacI	GAGCTC	1 cut(s)	1079
SaqAI	TTAA	5 cut(s)	180, 237, 629, 801, 1014
SatI	GCNGC	4 cut(s)	447, 639, 876, 1500
Sau3AI	GATC	4 cut(s)	343, 522, 697, 1192
Sau96I	GGNCC	4 cut(s)	7, 561, 998, 1403
SchI	GAGTC	4 cut(s)	244, 612, 770, 1201
ScrFI	CCNGG	3 cut(s)	129, 688, 995
SduI	GDGCHC	4 cut(s)	687, 1079, 1251, 1516
SfaNI	GCATC	5 cut(s)	157, 400, 625, 857, 892
SfcI	CTRYAG	2 cut(s)	264, 1101
Sfr274I	CTCGAG	1 cut(s)	162
SinI	GGWCC	3 cut(s)	7, 998, 1403
SlaI	CTCGAG	1 cut(s)	162
SmiMI	CAYNNNNRTG	1 cut(s)	1239
SmlI	CTYRAG	2 cut(s)	162, 800
SmoI	CTYRAG	2 cut(s)	162, 800
SpeI	ACTAGT	1 cut(s)	650
Sse9I	AATT	6 cut(s)	176, 212, 676, 741, 1066, 1112
SsiI	CCGC	3 cut(s)	103, 209, 805
SspMI	CTAG	7 cut(s)	303, 399, 651, 708, 906, 1239, 1440
SstI	GAGCTC	1 cut(s)	1079
StyD4I	CCNGG	3 cut(s)	127, 686, 993
StyI	CCWWGG	1 cut(s)	1309
TaaI	ACNGT	3 cut(s)	224, 1044, 1105
TaiI	ACGT	3 cut(s)	583, 1131, 1149
TaqI	TCGA	4 cut(s)	84, 163, 1107, 1411
TasI	AATT	6 cut(s)	176, 212, 676, 741, 1066, 1112
TatI	WGTACW	1 cut(s)	621
TfiI	GAWTC	2 cut(s)	759, 1292
Tru1I	TTAA	5 cut(s)	180, 237, 629, 801, 1014
Tru9I	TTAA	5 cut(s)	180, 237, 629, 801, 1014
TseFI	GTSAC	2 cut(s)	38, 98
TseI	GCWGC	4 cut(s)	446, 638, 875, 1499
Tsp45I	GTSAC	2 cut(s)	38, 98
TspDTI	ATGAA	5 cut(s)	17, 753, 1074, 1496, 1545
TspGWI	ACGGA	2 cut(s)	39, 113
Van91I	CCANNNNNTGG	1 cut(s)	1196
Vha464I	CTTAAG	1 cut(s)	800
VpaK11BI	GGWCC	3 cut(s)	7, 998, 1403
XagI	CCTNNNNNAGG	1 cut(s)	16
XapI	RAATTY	3 cut(s)	176, 212, 1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1415
XhoI	CTCGAG	1 cut(s)	162
XmiI	GTMKAC	1 cut(s)	1395
XspI	CTAG	7 cut(s)	303, 399, 651, 708, 906, 1239, 1440

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.