MD16G1001800.v1.1

Prokaryotic RING finger family 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0014456
Physical Location & Seq
Forward (+)
108642 .. 126676
18035 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1001800.v1.1.491

Sequence Viewer

Length: 14304 bp
ATGGCGTCTCCGGCGTCGACACCGGAGTCGATCTTTCTCGAAGACTTCGGTCAAAAGGTTGACCTGACGCGGCGAATCCGCGAGGTTTTAGTGAACTACCCAGAGGGGACGACGGTGCTCAAAGAGCTCATCCAGAACGCCGACGATGCCGGCGCTACCTCCGTCCGACTCTGCCTCGACCGTAGGCTTCACGGCACCGACTCCCTTCTTTCGGCGACCTTGGCGCCGTGGCAAGGCCCCGCGCTTCTGGCCTATAACGATGCCGTTTTCACGGAGGAAGACTTTGTAAGTATTTCGAGGATCGGCGGGAGTAGCAAGCATGGCCAGGCCTCAAAAACCGGCCGATTCGGGGTTGGGTTCAACTCAGTGTACCATTTAACTGATTTGCCGTCGTTTGTGAGTGGGAAGTATGTGGTGTTGTTTGATCCCCAAGGCATGTTTCTGCCAAAGGTTTCGGCATCCAATCCCGGAAAGCGGATTGACTATGTTTCTTCTTCAGCTATCTCTGTGTACAAAGATCAGTTCTTGCCTTACTGTGCTTTCGGTTGCGACATGAAAACACCATTTGCAGGAACTCTATTCCGTTTCCCTCTGAGGAATGCAGACCAGGCGGCAACCAGTAAGCTTTCTAGGCAAGAGTATTCCCAAGACGACCTTTCTTCCTTGTTTGTTCAGCTTTATGAGGAAGGAGTTTTCACCTTACTTTTCCTTAAAAATGTCATGCGTGTTGAAATGTATGTGTGGGAAGACCGGGACTATGAGCCCAGGAAGCTTTACTCCTGCTCGGTCAGTTCTGCCAGTGATGACATTGTTTTGCACCGGCAAGCAGCGTTGAGATTTCCCAAGTCGGTAAACTCTACAGAGAGTCAGGTGGACTGCTATTCAGTAGAATTTTTAAGTGAGGCAACAATTGGGACCCAATCTGAGAAGAAGACAGATAGTTTTTATTTAGTGCAGACGCTGGCATCCACATCCAGTAGGATTGGTTCTTTTGCAGCTAAAGCTTCTAAGGAATATGATATTCACTTGCTGCCATGGGGATCAGTTGCAGCTTGCATATCCGATAATTCAGCACATACTCTCAAGCTTGGTCGTGCATTCTGCTTTCTCCCTCTGCCTGTAAGGACTGGCCTCAATGTGCAAGTTAATGGATACTTTGAGGTCTCTTCAAATCGTCGTGGCATTTGGTATGGGGCTGACATGGACAGAAGCGGGAAAATCCGTTCTGTATGGAACAGGCTTCTTTTAGAAGATGTTGTGGCACCTGCTTTTACGCAACTTCTTCTTGGTGTAAGGGGACTGCTAGATTCCAGGAACTTGTACTATTCCTTATGGCCTAATGGTTCTTTTGAAGAGCCGTGGAATATTCTTGTTGAGCATATATACAGAAACATTTCTAGTGCTCCTGTGTTGTATTCAGATCTTGACGGTGGAAAATGGGTGTCACCAATTGAAGCTTTTCTACATGATGAGGAAGTTACTAAGATTAAGGAACTTAGCGAGGCCCTGATTGATCTAGGAATGCCTGTTGTGTGTTTGCACAATGGTCTATTTAACACGCTCTTGAAATATGCTTCCAGTTTTCAGCAGAAGGTGGTTACTCCTGATGCAGTACGTTGTTTTGCCAGAGAGTGTAGATCTGTTTCTACCCTGGGAAAATATCACAAGCTTGTACTGTTGGAATATTGTCTTGAAGATTTGCTTGATGCTGATGTTGGAACGCATGCATATAACCTGCCCTTGCTTCCACTGGCAAATGGTGAATTTGGATCATTGTCAGATACCTCCAAAGGAATTTCTTACTTTGTTTGCAATGACTTAGAATACATGCTACTTCAACATTTATATGATAGAGTAATTGACAAGAACATTCCCAACAACGTACTAAGTAGACTCTCTGCTATTGCTAAGTCCTCAAAGGCGAATCTTGTTATTTTCAATATTCAGTGCTTCCTTCAGTTTTATCCAAGATTTGTACCTGCTGATTGGAAATACAAAAGCAAAGTATTATGGGACCCAGAATGCTGTCATAATCACCCCACTTCAACATGGTTTATGCTATTTTGGAAGTATCTTCGGAATCAGTGCGAGAAGCTATCATTGTTTAGCGATTGGCCCATTTTGCCAACTACTTCTGGCCATCTGTACAGAACCTCTAGACAGTCGAAATTGATCGATGCAGAAAAACTTTCTGACAAGATGAAAGAAATACTTGTTAAAATTGGTTGTAAGATCCTGAACCCCAATTATGGAGTTGAACACTCAGATTTATCTAATTATGTAAGTGACGGTAATGCTGCAGGGCTTCTCGAGTCTATATATGATGCTGTCTCTTTAAATTATGGCAGCGTAGTAACATGTTTTGATAATTTGGAAGCCAAAGAGAGGGATGAACTTCGTGCATTTTTTCTTGATCCGAAGTGGTATTTTGGAGACTGTTTGCATGAGTCTGACATAAGAAATTGCAAGAGGCTGCCTATTTATAAAGTCTATGGTGGTGGATCTACTCAAAGATTCCAATTCTCTGATCTTGAAAATCCGCAGAAGTACTTACCACCCTTAGACATCCCTGAGTTCTTTCTTGGAGCCGAGTTCCTTGTTAGCTCCTCAGATGTTGAGGTTGACATTCTGTTAAGATATTTTGGCATTGAGAGAATGGGGAAGGCACGCTTCTATAAGCAGCAGGTGTTAAACAGAGTAGGGGAGCTACTACCTGAAGTTCGTGACAGCATTGTTCTTTCCATTCTGCAAAACCTGCCACAGTTGTGTGTTGAGGATGTATCTTTCAGGGATTATTTGAGAAATTTAGAATTTATTCCAACACTCGTTGGTGCTCTTAGGTGTCCTACTGCATTATATGATCCTCGCAATGAAGAGTTATATGCACTGTTAGAGGATTCTGATTGTTTTCCCTATGGTTCTTTTCAAGAGCCTGGTATTTTGGACATGCTACAAGGCTTGGGCCTTAGAACATCTGTGACCCCTGAGACGGTCATACAAAGTGCACGACAGGTAGAACGGCTAATGCATGAGGATCAGAAAAAGGCCCATTTAAAAGGCAAGATACTTCTGTCCTACTTAGAAGTTAATGCAATGAAATGGATACCCCATCCTGTAAATGATGATCGAGGAACAGTGAACAGAATGCTGTCACGAGCTGCAACCACATTCAAGCCTCGGAACTTGAAGTCTGACCTCGAAAAGTTCTGGAATGATCTTCGGCTGATCAGTTGGTGCCCAGTGGTAGTTTCTGCTCCATTTCAAACGTTACCATGGCCTGTCGTGTCATCCGTTGTTGCTCCACCGAAGCTTGTAAGATTGCAAGCAGATATGTGGCTTGTTTCAGCCAGCATGCGAATACTTGATGGAGAGTGTTCATCCACAGCACTATCATCTGCTCTTGGATGGTCTTCTCCACCTGGTGGAAGTGTCATTGCAGCCCAACTACTTGAGCTTGGAAAAAATAATGAGATTGTGAATGATCAGGTTCTTCGTCAGGAATTAGCCTTGGCAATGCCAAGGATATATTCAATGCTGACAGGATTGATTGGTTCAGATGGGATGGACATTGTGAAGGCTGTTCTTGAAGGTAGTCGGTGGGTTTGGGTGGGAGATGGATTTGCAACAATAGACGAGGTTGTTCTTAATGGTCCTGTTCATATGGCTCCCTATATACGTGTCATACCAGTCGATTTAGCTGTTTTCAAGGAATTATTTATAGAGCTTGGTATTCGAGAATTCTTGAACTTTACCGATTATGCTAGTATTTTATGTAGAATGGCTTTGAAGAAAGAATCATCTCCTCTCGATGCACGGGAAATGAGAGCAGCCTTATTGATTGTACAGCATCTGGCTGAAGTTCAGATACAAGACCAGAAAGTTAAGATTTATTTACCAGACATGTCAGGCAGATTATACCTTGCCAGTGACTTAGTTTATAATGATGCTCCGTGGTTGCTTGGCTCAGAGGATCACGATAGCCTTTTTGGCGGTCCACCTAATTTGGCACTGACCGGAAGAACAACAGTTCAGAAATTTGTGCACGGGAACATATCTATTGATGTTGCAGAGAAGCTTGGTGTTTGCTCTCTGCGCAGGACCTTGCTAGCTCAGAGTGCTGATTCTATGAATTTGAGTTTATCTGGAGCTGCTGAAGCTTTTGGACAGCATGAAGCCTTGACAACTAGACTTAAACACATTCTTGAAATGTATGCGGATGGACCTGGAATTCTATTTGAGCTGGTTCAAAATGCAGAGGATGCAGGAGCTTCTGAAGTAACCTTTCTCCTGGACAAAACTCAGTATGGGACTTCTTCTGTTCTTTCACCGGAAATGGCAGATTGGCAAGGCCCTGCTTTATACTGTTTTAATGACTCTGTCTTTGGTCCCCAAGATCTCTATGCAATCTCACGCATTGGCCAAGAAAGTAAACTAGAGCAGCCTTTCGCAATTGGGAGATTTGGGCTGGGTTTTAATTGTGTCTATCATTTCACAGACATCCCCACATTTGTTTCTGGTGAAAATATTGTTATGTTTGATCCTCATGCCTGTAATTTGCCTGGGATCTCTCCATCACATCCCGGCCTTCGAATTAAATTTGCGGGAAGAAGGATTATGGAACAATTTCCTGATCAATTTTCTCCTTTCTTACACTTTGGGTGTGACTTGCAACATCCATTTCCTGGAACCCTTTTCCGGTTTCCACTCAGGAGTGCCAGTACTGCTTCCAGAAGCCAAATAAAGAAGGAAGGATATGCACCTGAAGATGTCATATCCCTGTTTGCTTCATTTTCTAAAGTTGTTTCTGAGACTTTGCTTTTTCTACGTAATGTAAAAGTTATCTCTGTTTTTGTGAAGGAAGGAAGTGGACATGAAATGAAACTTTTACATCGCGTCCATAAGCATTGCAATAGTGAGCCCGAAATGGGCCCCAATGGACAGCAGGATGTGTTTAGCTTGTTTGATGGGAATCGGCATAGCGGAATGGATAAAGATCAATTCCTAAAGAAATTGAGAAAGTCAATGGACAGTGATTTGCCATATAAATGTCAGAAGATTGTAATTACAGAAGAAAACTCATCTGGTAGTTTATCACACTCCTGGATAACATCTGAGTGTCTAGGTCGTGCACAAGCTAAGAACAAAACTGCAGTTTTGAATGACAAGTCCCAAAGTTATATACCCTGGGCATGCGTAGCTGCATATTTACAATCTGTCAAGGTTGGTTCGGGAATGAGCGGTATCCTGGAGATGAATGATGCCAGTGCTTCAAATGCGTTTCAAGTCTCCACAGGTTCTTTTCAAGATAGGAAATATTATGAAGGCCGTGCCTTCTGTTTCCTACCACTTCCAATTAGTACTGGTCTCCCAGCACATGTTAATGCATATTTCGAATTATCATCAAATAGGAGAGACATCTGGTTTGGTAGCGACATGGCTGGTGGTGGAAAAAAACGCTCAGATTGGAATATGTATCTTCTTGAGGGTGTTGTTGCCCCTGCTTATTGTCGCATGCTAGAGAAGGTAGCACTGGAGATTGGCCCATGTGATTTGTTCTTTTCACTTTGGCCTGAAACAAGAGGATTAGAACCCTGGGCTTTAGTGGTGCGGGAACTCTACACTTTCATTGCTGACTGTGGTCTTCGTGTATTATATACAAAAGCTCGAGGTGGTCAGTGGATCTCAACAAAACAAGCCATATTCCCTGATTTTACTTTTGACAAGGTAGATGAGCTTATTGAAGCATTATCAGACGCTGGTCTTCCTCTGGTCACTGTTTCGAAGCCAATTGTAGAGAGATTTATGGACGTTTGCCCCTCATTGCATTTTTTGACACCACAGTTGTTAAAAACTTTATTAATTCGAAGGAAACGTGAATTCAAGGGTAGAAACACAGTGATATTGACCCTTGAATATTGCTTACTTGATTTGAAGATACCGGTCCAATCTGCTGGTTTGTATGGTTTGCCGTTACTACCCCTTGCTGATGGTTCATTTACAACATTTGACAAGAATGGGGTTGGGGAAAGAATATATATTGCACGAGGGGATGAGTATGATCTTCTCAAGGATTCGGTTTCTAATCAACTTGTAGATTGCGGAATCCCAGAAGGAGTTTATGAGAAGCTATGCTTCATAGCCCAAAGCGAGGCCTCAAATGTTTCTTTTCTGTCTTGCCTTTTACTGGAGAAACTCCTTTTGAAATTACTTCCAGCAGAGTGGCATCATGCAAAACAGGTGACATGGGCTCCTGGTCAGCAGGGTCAACCAAGTTTAGAGTGGATAAGACTTCTCTGGAGCTATTTGAGGTCATCTTGTGATGACTTGTCGCTTTTTTCTAAGTGGCCAATATTGCCTGTTGGGAATTATTGTCTCCAGCAACTAGTTGAAAATTCAAATGTAATCAAGGATGATGGGTGGAGTGAGAACATGTCATCTTTGTTGCTGAAAATAGGATGCGTTTTCCTGAGGCAAGACCTTCCGATAGATCATCCACAGTTGAAAATTTTTGTGCAGTTGCCAACAGCAATTGGCTTATTAAATGCACTTCTGGCGGTTGCAGGTAGGTCAGAGAACATTGAGGGGCTTTTTCACAATGCATCGGAAGGAGAGATGCATGAACTTCGGAGTTTCATTCTTCAGTCCAAATGGTTTATCGAAGAAAAAATGGAATATAAACATATAGACATCATAAAACACCTTCCTATGTTTGAGTCATATAAAAGTAGAAAACTTGTAAGTTTGAGTAATCCTATCAAATTGCTTAAACCTGGTGACATTCAGGAGGATTTTTTGAGTGATGACTTTGTACGGGCAGAATCAGAAAAGGAAAAAAGTATTCTGAGAAGATATTTAGAGATCGAAGAACCCTCCAGGATGGAATTCTACAAAGATCATCTACTTAACCGCCTGCCAGAGTTTCTTTCAGAGCAGGGATCTCTTTCAGCTATTCTGCATGGTGTACAGCTTTTAGTTGAAGCAGATAATTCTTTGAAATCTTCACTTTCTGAAATACCTTTTGTCTTGACAGCCGATGGGTCTTGGCAGCAGCCCTCCAGGCTCTATGATCCTCGAGTGCCTGCACTAAGGAAGGTGCTACACAGAGAAGTGTTTTTCCCTTCTGACAAATTCTCAGATACAGAAACTTTGGATATTTTAGTTATGCTTGGACTCAGAAGAACTTTGGGCTATTCTGGTTTGCTCGATTGTGCTAGATCAGTTTCTTTGTTGCATGATTCTGGCAAATCAGAGACACTAAGCTATGCGAGGAGGTTGCTTGTTTGTTTAGATGCTCTTTCACTTAAGCTCTCGATTGGCGAGGAAGGAAATCTTGATGAGTCAAAGAATTCAATTTTCCACAAGGACAATGCAGCTGAGGATGGTGATGTTATGCATGATGAGTCTCTTAACAGAAATGGGAACCAAATTTTAGAGGATTTGGACATAGATTCTTTCATAAGTAATTTCATTGATGATCAGCCAGAAGAGGATTTTTGGTCTGAAATGAGGGCTATTGCTTGGTGTCCTGTATGTGCTGATCCACCTCTAAAAGGAATCCCGTGGTTGAAGTCCAGTAACCAGGTATCACCCCCATGCAAAGTGAGACCTAAATCCCAGATGTTTGTGGTATCCTACTCAATGCATATACTAGAGGGTGAATGCTGCTCGTTGTACCTGCAAAAAAGACTTGGTTGGATGGATCGCCCAAACATACATATTTTATCCACACAGTTGACTGAGCTATCCAAGTTATATAGACAGCTCAAATTACATCCATCTGATCTACCTGTTGTTGATACTGCACTTTCTGATGGAATTCCATCACTCTATTCAATGATGCAAGAGCATGTTGGCACTGATGAATTTGCGGAGCTAAAATCAGCATTAGATGGTGTTTCCTGGGTTTGGATTGGGGATAACTTTGTTGTTCCAAATGCTCTTGCATTTGATTCACCTGTGAAATTTACTCCATATTTGTATGTTGTTCCATCTGAATTATCGGAATTCAGAGATCTGCTCATGAAATTAGGTGTGAGAATTAGTTTTGATATTTGGGACTATTTGCATGTCTTACAACGATTGCGAAATGATGTGAAAGGATTCCCGTTGTCAACAGATCAGTTAAATTTTGTCCATTGTATCCTTGATGCTGTAGCAGATTGTTGCTCAGAGAAGCCACTTTTTGAAGCATCTAACACTCCAATCTTAATTCCAGATTCTTCTGGAGTTCTTATGGATGCTTGCAATCTTGTGTATAATGATGCACCATGGATGGATAGCAGTACTCCCATTGGGAAATATTTTATACATCCAAGTATTAGCAATGATCTGGCGTGTAGGTTGGGGGTACAATCACTTCGCTGCCTCTCCTTAGTTGATGATGACATGACTAAAGATCTTCCTTGCATGGACTTTGCTAGAATAAAAGAGCTTTTGGCATCACATGGGGACAATGACCTTTTATTGTTCGACCTACTTGAGTTGGCAGATTGCTGCAAAGCCACTAAGCTACACCTAATCTTTGACAAGAGGGAACATCCTCGCCAGTCTTTGTTGCAACACAATATGGGTGAATTTCAAGGGCCTGCCCTATTAGCCATTCTAGAAGGGGTTAGCTTGAGTAGAGAGGAAGTAAGTAGCCTCCAATTTCTACCTCCATGGAGACTAAGGGGCAGTACACTTAACTATGGTTTGGCTTTGCTTAGCTGTTATTTTGTCTGTGATCTCCTCTCAGTGGTTTCTGGTGGCTACTTATACATGTTTGATCCTCGTGGTTTGGTGCTTGCTGCACCGTCAACCTGTGCTCCTGCAGCAAAAATGTTTTCTTTGATAGGTACTAATTTGACTGACCGGTTCCGTGATCAATTTAATCCCATGCTGATTGGTCACAATATGTCATGGTCATCATCGGATTCTACTATTATTCGCATGCCTCTGTCTTCTGAATGCTTGAATAATGGACTTGAACTTGGATCAAGGAGATTAAAGCAGATTAGTGACAGATTTATGGAGCACTCTTCTAGATCACTTATATTCTTAAAGTCGGTGATGCAGGTGTCAATCTCAACATGGGAGGAAGGAAACCCACAGCCTTGTGAGGACTATTCAGTTAGCATTGATTTGTCATCTGCTATCATGAGAAATCCCTTTTCAGAGAAAAAGTGGAGGAAGTTTCAAATATCTCGATTGTTTAATAGCTCCAATGCTGCAACAAAATTGCATGTAATAGATGTACATTTGAACCATGGGGCTGCAAGAGTTGTTGACCGATGGCTTGTTGCACTCAGCCTAGGCTCTGGGCAAACAAGAAACATGGCTCTAGATAGGCGATATCTCGCATACAACTTGACACCTGTTGCCGGAGTTGCAGCACATATATCCCGTGATGGCCATCCTGCAGATGTTTGTCTAGCAAGTTCTATCATGTCCCCTCTTCCTCTGTCTGGTGGTATAAATGTACCTGTTACTGTTCTTGGATGTTTCCTGGTTTGTCACAATGGAGGTCGCTCCCTTTTTAATTACCAAGAAAAGCAAGCTTCAGAAGAGACACGGGCTGATGCTGGAAATTATTTGATGGAAGCCTGGAACAGAGAGTTGATGTCATGTGTGCGGGATTCCTACATTGAATTAATATTGGAAATCCAGAGGTTAAGAAAAGATGCTTCTAATTCTACAATCGAATCAAGTGTAAGTCGTGCAATCAGCCTGTCTTTGAAGGCTTATGGAGACAAAATTTATTCCTTTTGGCCAAGGTCTAATGTGCAAAATATGGTCAAACTACAAGGAAATGGTTGTAGTTTAGTTCCAATGGAAGTGCTCAAACCAGAATGGGAATGCTTAATTGAACAGGTGATAAGGCCTTTCTATGCTCGTGTTGTTGACCTTCCTGTGTGGCAGCTTTACTCTGGAAACCTAGCCAAGGCTGAAGAGGGTATGTTTCTTTCACAGCCAGGGAATGGGGTGGGTGGTAATCTGCTTCCAGCTACAGTTTGCAGCTTTGTAAAGGAGCACTACCCTGTGTTTTCAGTACCTTGGGAGTTGGTAACTGAAATTCAAGCCCTGGGGATTACAGTTCGGGAAGTGAAACCTAAAATGGTTCGGAATCTTTTAAGAGTTTCTTCGACATCTTTTGTTCTCCGATCAGTCGATATGTATATAGACGTTCTTGAGTACTGCTTGTCTGATATTGAGATTCGGGAATCATCTAATTCAAATGGAAATTCTCTGACAGTTGACCATAGTAACTCTAACTATATCCATAGGGAAAGTCAAGTTGTCGGTAGCAGTTCTGCTCCTGTTTCAGTCCCTGTGCATAATTTTCGTGCATCATCTATGCAGAATGCTAGCAGTTCAGGAGATGCAATTGAAATGGTGGCAAATCTGGGGAAGGCTTTAATTGATTTTGGCCGAGGAGTTGTTGAGGATATTGGTAGGGCTGGAGGGCCCTTAGCTCAGAGGAACATGGTTGCAGGCAGCAGTAATAGCATCTATGGAAATGGAGACCAAAATCTTCTATCAATAGCAGCTGAGCTTAAAGGTTTACCATTCCCAACTGCAGCAAACCATTTGACCAAGTTGGGCGTTACTGAACTTTGGGTTGGGAACAAGGAGCAACAGGCGTTGATGGTTTCTTTGGCTGAAAAGTTTGTCCACCCTAAGGTATTGGAAAGGTCAATCTTGGCTGATATTTTTTCAAATGGTGTGCTACTATCATTATTAAAACTGCAAAATTTCACTCTTCAGCTACTGGCCTGTCATATGAGGATAGTTTTTCATGGTAACTGGGTGAATCATGTAATGGGCTCAAATATGGTTCCTTGGTTTTCATGGGAGAATGATACATCAAGCTTTGGTGGTGAAGGAGGTCCTTCCCCCGAATGGATAAGACTCTTCTGGAAAAATTTCAGTGGCAGTTCAGAAGACCTCTTACTCTTTTCTGACTGGCCCCTCATTCCCGCTTTTCTTGGTCGGCCAATCTTATGCCGTGTTAGGGAGCGTAATTTGGTATTCATTCCACCCCTGGTTATTATTCCAACATCAGAAGAAGGTGCCTTGGAAATGGGAGCAACTGGAAGCAATGATCTGCCTGAATCTGAATCTGTTCAAGCTTACGTTTCAGCTTTTGAAGTAGCTAAAAACACGCATCCTTGGTTGTTATCATTGTTGAATCTCTGCAACATACCTATATTTGATATAGCTTTTCTGGACTGTGCTGTTTCATGCAACTGCTTCCCTGCTCCTGGCCAATCATTAGGGCAAATTATTGCTTCCAAGTTGGTTGCAGTTAGAAATGCTGGCTATTTCTCCGAACTTACATCCCTTTCAGCTTCAAATTGTGATGCACTTTTTGCACTTTTGGCTAATGACTTTTTGTCAAATGGCTCTAATTTTAGAGGGGAAGAACTTGAAGTTTTACGTTCACTTCCTATATATAAAACAGTTGTGGGTTCATACACACGATTGCTCAGTGATGACCAGTGTATCATTTCTTCAAGTTCATTCCTTAAACCATATGATGAACGTTGTCTCTCCTATTCCACTGATTCAGTTGAATTTTCATTACTTCGAGCACTTGGAGTCTCTGAATTGCATGATCAGCAGATTTTAATAAGGTTTGGCTTGCCTGGGTTTGAAGGTAAACCCGAATCTGAAAAGGAGGATATACTAATATATCTTTACACAAATTGGCAAGACCTACAAATGGATTCTTCTGTAATTGAAGCTTTAAAGGAGGCTAAATTTGTAAGGAATTCTGATGAGTTTTGCACATATCTGTCTAAGCCCAAGGATTTATATGATCCTGGCGATGCTTTACTAACATCTGTTTTCTCTGGAGAGAGGAAAAAGTTTCCAGGAGAAAGGTTTAATTCAGATAGGTGGCTTCGCATTTTGAGAAAAACTGGTCTCCGAACTGCAACAGAATCTGAGGTGATACTTGAATGTGCCAAAAGAGTAGAGTTTCTTGGAACTGAATCCATGAAGTCCAGAGATTTGGATGATTTTGAGGATTTAAGCAATGCTCAGAATGAAGTTTCAGTGGAAGTTTGGACACTAGCTGGATCTGTTGTTGAAACAGTGTTCTCAAACTTTGCTGTCCTCTATGGCAACAACTTCTGCGATCTCCTTGGAAAAATTAAATGCATACCTGCGGAATTTGGTTTTCCAAATGTTGTTGGAAAAAAAGGTGGCAAGAGAGTACTCACTTCATATAGCGAAGCCATTCTGTCAAGGGATTGGCCTCTGGCTTGGAGTTATGCTCCCATTATTTCAAGACAAAATCTTGTTCCTCCCGAGTATTCCTGGGGATCACTCCAGCTTAGAAGCCCTCCATCTTTTCCTACAGTACTAAAACACTTGCAGATTGTTGGAAAAAACGGTGGTGAAGACACACTTGCTCATTGGCCAACTGCATCAGGCATGATGACTATTGATGAAGCTTCTTGTGAAGTGTTAAAGTACTTGGATAAGACTTGGAATTCCCTCTCTTCTTCAGATAAAATGGAGTTGCAAAGAGTTCCCTTTATACCTGCCGCAAATGGAACGCGCTTGGTGACAGCAAACATGCTTTTTGCCCGTCTAACAATTAACTTATCCCCATTTGCCTTTGAATTGCCTACTTTATATCTTCCTTTTCTGAAGATTCTCAAAGATTTGGGACTTCAGGACATGCTTTCAATTGAGTCTGCGAGGGATCTTCTTTTGAATCTCCAGAAAACTTGTGGATATCAGCGTCTAAATCCAAATGAACTCCGGGCGGTGCTTGAAATTTTGCATTTTATCTGTGATGGGATTGGTGAAGACATGTCCAATGGGCCCAGTTGGACGTCAGAAGCAATAGTCCCTGATAATAGCTGCAGACTTGTTCATGCTATGTCCTGTGTGTATATTGATTCCCATGGATCCCGATTTATAAAATGCATTGACCCTTCCAGGTTAAGATTTATTCATCCAGACCTTCCAGAGAGATTGTGCATTGTCTTGGGCATAAAAAAGCTGTCTGATGTAGTCATTGAGGAATTAGATGACGAGGAGCATTTGCAGACTTTGGATTACGTTGGGCCGGTCCCAATAGCAGCCATCAGAGAGAAACTGTTGAGCAAGTCACTTCAGGGTGCTGTATGGACTGTTGTAAATAGCATGGCTAGCTACATTCCTGCAATTAAGAATTTATCTCTTGGTACCATACAAAACTTATTAGAAGCTGTTGCAGAGAAGTTGCAGTTTGTTAAATGCATTCATACTCGTTTTTTGCTTCTTCCAAAGTACGTAGACATTACACAAGCAGCTAAGGACTCCATCATACCAGAGTGGGTTGATGGATCCATGCATCGAACACTTTACTTCATTAACCGGTCAAACACCAGTATATTAGTTGCTGAACCACCATCCTATATTTCGGTTTTTGATGTTATTGCAATTGTTGTAAGCCTGGTTTTGGGGTCTCCTACTCCATTACCTATTGGATCTCTATTTGTCTGTCCTGGAGGCACTGAAACTGCAATTGTCGATATTCTGAAACTTTGTTTGGACAAGCAAGAAACGGAAGCAACTAGTGGCAGCAATGGTTTGATAGGCAAAGAACTGTTGCCTCAAGATGTTCATCAAGTACAATTTCATCCATTGAGGCCCTTTTACGCTGGAGAGATAGTGGCATGGCGCTCTCAAAATGGAGAAAAGCTCAAATATGGTAGAGTTCCAGATGATGTCAGACCATCAGCGGGCCAAGCACTGTACAGATTCAAGGTGGAAACCTTAACGGGTGTGATGCAGCCTCTTCTTTCTTCACATGTTTTCTCATTCAGAAGTATAGCGATGGGCAGTGAGACTTCACCAATGCCAGTGGATAATAGTCATGCAGTAGTTAATAGCAGAACTCATGTTGAAATGCCAGAAACTTCTGGAAGCGGCGAAGCAAGATCTCAGCTGCAAGCTGGCAAAGAGCTCCAGTATGGCCGAGTATCAGCTGAAGAACTGGTGCAAGCCGTACAAGAGATGCTTTCTGCAGCTGGGATTTATATGGATGTGGAGAAGCAGTCCCTACTACAGAAAACAATAACGCTGCAAGAACAGTTAAAGGAGTCCCAGACAATCCTTTTGCTTGAACAGGAAAAAGCTGATACGGCAGCAAAAGAAGCCGATTCAGCAAAAGCAGCCTGGCTTTGTCGGGTCTGCTTGACCGCTGAAGTTGACATAACTATAGTTCCTTGTGGCCATGTACTCTGTCGGAGGTGCTCATCTGCCGTTTCCAGGTGTCCATTTTGTCGACTCCAGGTCTCCAAAACTATGAGAATATTTCGGCCGTGA

Protein Analysis

4768

Amino Acids

532.71

Weight (kDa)

5.55

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 20 - 259 1e-87 Sacsin domain
SACS PF25794 1390 - 1627 1.2e-76 Sacsin domain
SACS PF25794 2806 - 3034 1.1e-21 Sacsin domain
zf-C3HC4_3 PF13920 4720 - 4760 4.7e-09 Zinc finger, C3HC4 type (RING finger)
Prok-RING_4 PF14447 4721 - 4763 2.2e-06 Prokaryotic RING finger family 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014456)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23110
fragaria_vesca FvH4_4g36870 FvH4_4g36870 FvH4_4g36870
malus_domestica MD16G1001800.v1.1
prunus_persica Prupe.1G347000_v2.0.a1
pyrus_communis pycom16g00380
rosa_chinensis RchiOBHm_Chr4g0446631
rosa_laevigata RLG00000005643
rosa_multiflora Rmu_sc0001753.1_g000045
rosa_roxburghii Rroxscaffold_5G00387020
rosa_rugosa Rorug04G0373500
rosa_samantha Rh4AG434700 Rh4BG443800 Rh4CG461100 Rh4DG442600
rosa_wichuraiana Rw4G037170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 2484, 3939, 12911
AarI CACCTGC 3 cut(s) 1273, 2674, 9043
AasI GACNNNNNNGTC 1 cut(s) 25
AatII GACGTC 1 cut(s) 12827
Acc16I TGCGCA 1 cut(s) 4094
Acc65I GGTACC 1 cut(s) 13178
AccB1I GGYRCC 6 cut(s) 194, 223, 1261, 3234, 11048, 13178
AccB7I CCANNNNNTGG 3 cut(s) 3422, 4682, 9956
AccBSI CCGCTC 1 cut(s) 5238
AccI GTMKAC 4 cut(s) 17, 1891, 13269, 14263
AccII CGCG 5 cut(s) 70, 81, 242, 4893, 12544
AclI AACGTT 2 cut(s) 3266, 11521
AcyI GRCGYC 4 cut(s) 5, 14, 224, 12824
AdeI CACNNNGTG 1 cut(s) 3422
AflII CTTAAG 1 cut(s) 7301
AflIII ACRYGT 8 cut(s) 2357, 3676, 3900, 5374, 6429, 8757, 12801, 13786
AgeI ACCGGT 3 cut(s) 5938, 8850, 13350
AhdI GACNNNNNGTC 2 cut(s) 11371, 14270
AhlI ACTAGT 2 cut(s) 6382, 13550
AjuI GAANNNNNNNTTGG 8 cut(s) 423, 455, 3511, 3543, 10581, 10613, 13508, 13540
AleI CACNNNNGTG 1 cut(s) 2764
AloI GAACNNNNNNTCC 2 cut(s) 1207, 1239
Alw44I GTGCAC 3 cut(s) 3003, 4040, 5127
AlwNI CAGNNNCTG 6 cut(s) 961, 3850, 5756, 10307, 10747, 11924
Ama87I CYCGRG 4 cut(s) 2309, 5664, 7071, 12290
ApaI GGGCCC 3 cut(s) 4931, 10446, 12816
ApaLI GTGCAC 3 cut(s) 3003, 4040, 5127
ArsI GACNNNNNNTTYG 6 cut(s) 4364, 4396, 5405, 5437, 14077, 14109
AseI ATTAAT 2 cut(s) 5858, 9629
AsiGI ACCGGT 3 cut(s) 5938, 8850, 13350
Asp700I GAANNNNTTC 8 cut(s) 1393, 1458, 2814, 4623, 8099, 10901, 11100, 12219
Asp718I GGTACC 1 cut(s) 13178
AspA2I CCTAGG 1 cut(s) 9289
AspLEI GCGC 6 cut(s) 155, 226, 244, 4095, 12546, 13659
AsuC2I CCSGG 4 cut(s) 468, 752, 4581, 12752
AsuII TTCGAA 4 cut(s) 4588, 5391, 5780, 5863
AsuNHI GCTAGC 3 cut(s) 4105, 10343, 13142
AvaI CYCGRG 4 cut(s) 2309, 5664, 7071, 12290
AvrII CCTAGG 1 cut(s) 9289
AxyI CCTNAGG 2 cut(s) 6467, 10656
BaeGI GKGCMC 7 cut(s) 3007, 3239, 4044, 4931, 5131, 10446, 12816
BaeI ACNNNNGTAYC 4 cut(s) 3056, 3089, 11464, 11497
BalI TGGCCA 9 cut(s) 324, 2139, 4419, 6346, 9390, 9748, 11244, 12403, 14211
BamHI GGATCC 2 cut(s) 12899, 13319
BanI GGYRCC 6 cut(s) 194, 223, 1261, 3234, 11048, 13178
BanII GRGCYC 9 cut(s) 129, 765, 4920, 4931, 6250, 10446, 10805, 12816, 13944
BauI CACGAG 4 cut(s) 3153, 6042, 8769, 9870
BbvCI CCTCAGC 1 cut(s) 7374
BcgI CGANNNNNNTGC 6 cut(s) 6605, 6639, 7255, 7289, 10301, 10335
BciVI GTATCC 5 cut(s) 1145, 3096, 5252, 7639, 8150
BclI TGATCA 6 cut(s) 3225, 3481, 4630, 7474, 8860, 11593
BcnI CCSGG 4 cut(s) 468, 752, 4581, 12752
BcuI ACTAGT 2 cut(s) 6382, 13550
BfoI RGCGCY 3 cut(s) 156, 227, 13660
BfrI CTTAAG 1 cut(s) 7301
BfuI GTATCC 5 cut(s) 1145, 3096, 5252, 7639, 8150
BglI GCCNNNNNGGC 2 cut(s) 3987, 7057
BglII AGATCT 6 cut(s) 1420, 1637, 4393, 8011, 8395, 13916
BlnI CCTAGG 1 cut(s) 9289
BlpI GCTNAGC 2 cut(s) 8702, 10527
BmcAI AGTACT 8 cut(s) 2549, 4720, 5359, 8284, 10172, 12198, 12345, 12458
BmeRI GACNNNNNGTC 2 cut(s) 11371, 14270
BmeT110I CYCGRG 4 cut(s) 2309, 5664, 7071, 12290
BmrI ACTGGG 3 cut(s) 3233, 10792, 12810
BmtI GCTAGC 3 cut(s) 4109, 10347, 13146
BmuI ACTGGG 3 cut(s) 3233, 10792, 12810
BoxI GACNNNNGTC 3 cut(s) 48, 5637, 5757
BplI GAGNNNNNCTC 6 cut(s) 8001, 8033, 12241, 12273, 13662, 13694
Bpu10I CCTNAGC 3 cut(s) 7374, 10447, 13287
Bpu1102I GCTNAGC 2 cut(s) 8702, 10527
Bpu14I TTCGAA 4 cut(s) 4588, 5391, 5780, 5863
BpuEI CTTGAG 8 cut(s) 1067, 3470, 5501, 6050, 8498, 8638, 10187, 13575
BpuMI CCSGG 4 cut(s) 468, 752, 4581, 12752
Bsa29I ATCGAT 1 cut(s) 2175
BsaAI YACGTR 3 cut(s) 3677, 4826, 13267
BsaBI GATNNNNATC 4 cut(s) 4968, 4992, 9390, 13599
BsaHI GRCGYC 4 cut(s) 5, 14, 224, 12824
BsaI GGTCTC 7 cut(s) 1168, 5369, 7597, 10494, 11909, 13446, 14278
BsaWI WCCGGW 7 cut(s) 22, 4013, 4327, 4695, 5938, 8850, 13350
Bse118I RCCGGY 7 cut(s) 149, 338, 819, 5938, 8850, 13060, 13350
Bse21I CCTNAGG 2 cut(s) 6467, 10656
Bse8I GATNNNNATC 4 cut(s) 4968, 4992, 9390, 13599
BseCI ATCGAT 1 cut(s) 2175
BseJI GATNNNNATC 4 cut(s) 4968, 4992, 9390, 13599
BseRI GAGGAG 6 cut(s) 2596, 3792, 7282, 8717, 10425, 13043
BseSI GKGCMC 7 cut(s) 3007, 3239, 4044, 4931, 5131, 10446, 12816
BseX3I CGGCCG 2 cut(s) 340, 14297
BseYI CCCAGC 3 cut(s) 4465, 5368, 14006
BsgI GTGCAG 5 cut(s) 974, 6533, 7065, 7785, 8772
Bsh1236I CGCG 5 cut(s) 70, 81, 242, 4893, 12544
Bsh1285I CGRYCG 3 cut(s) 181, 343, 14300
BshNI GGYRCC 6 cut(s) 194, 223, 1261, 3234, 11048, 13178
BshTI ACCGGT 3 cut(s) 5938, 8850, 13350
BshVI ATCGAT 1 cut(s) 2175
BsiEI CGRYCG 3 cut(s) 181, 343, 14300
BsiHKCI CYCGRG 4 cut(s) 2309, 5664, 7071, 12290
BsmBI CGTCTC 2 cut(s) 12, 2981
Bso31I GGTCTC 7 cut(s) 1168, 5369, 7597, 10494, 11909, 13446, 14278
BsoBI CYCGRG 4 cut(s) 2309, 5664, 7071, 12290
Bsp119I TTCGAA 4 cut(s) 4588, 5391, 5780, 5863
Bsp120I GGGCCC 3 cut(s) 4927, 10442, 12812
Bsp1407I TGTACA 6 cut(s) 510, 2145, 3841, 6961, 9232, 13731
Bsp1720I GCTNAGC 2 cut(s) 8702, 10527
Bsp19I CCATGG 6 cut(s) 1034, 3272, 8267, 8657, 9244, 12895
BspDI ATCGAT 1 cut(s) 2175
BspFNI CGCG 5 cut(s) 70, 81, 242, 4893, 12544
BspHI TCATGA 2 cut(s) 8019, 9135
BspMAI CTGCAG 7 cut(s) 2302, 5152, 8812, 9400, 10558, 12857, 14005
BspOI GCTAGC 3 cut(s) 4109, 10347, 13146
BspQI GCTCTTC 1 cut(s) 1347
BspT104I TTCGAA 4 cut(s) 4588, 5391, 5780, 5863
BspT107I GGYRCC 6 cut(s) 194, 223, 1261, 3234, 11048, 13178
BspTI CTTAAG 1 cut(s) 7301
BspTNI GGTCTC 7 cut(s) 1168, 5369, 7597, 10494, 11909, 13446, 14278
BsrBI CCGCTC 1 cut(s) 5238
BsrFI RCCGGY 7 cut(s) 149, 338, 819, 5938, 8850, 13060, 13350
BsrGI TGTACA 6 cut(s) 510, 2145, 3841, 6961, 9232, 13731
BssAI RCCGGY 7 cut(s) 149, 338, 819, 5938, 8850, 13060, 13350
BssNI GRCGYC 4 cut(s) 5, 14, 224, 12824
BssSI CACGAG 4 cut(s) 3153, 6042, 8769, 9870
Bst2BI CACGAG 4 cut(s) 3153, 6042, 8769, 9870
BstACI GRCGYC 4 cut(s) 5, 14, 224, 12824
BstAFI CTTAAG 1 cut(s) 7301
BstAPI GCANNNNNTGC 3 cut(s) 2755, 4259, 11348
BstAUI TGTACA 6 cut(s) 510, 2145, 3841, 6961, 9232, 13731
BstBAI YACGTR 3 cut(s) 3677, 4826, 13267
BstBI TTCGAA 4 cut(s) 4588, 5391, 5780, 5863
BstENI CCTNNNNNAGG 2 cut(s) 7548, 9917
BstFNI CGCG 5 cut(s) 70, 81, 242, 4893, 12544
BstH2I RGCGCY 3 cut(s) 156, 227, 13660
BstHHI GCGC 6 cut(s) 155, 226, 244, 4095, 12546, 13659
BstMCI CGRYCG 3 cut(s) 181, 343, 14300
BstPAI GACNNNNGTC 3 cut(s) 48, 5637, 5757
BstSLI GKGCMC 7 cut(s) 3007, 3239, 4044, 4931, 5131, 10446, 12816
BstSNI TACGTA 2 cut(s) 4826, 13267
BstUI CGCG 5 cut(s) 70, 81, 242, 4893, 12544
BstXI CCANNNNNNTGG 3 cut(s) 5951, 6219, 11992
BstZI CGGCCG 2 cut(s) 340, 14297
Bsu15I ATCGAT 1 cut(s) 2175
Bsu36I CCTNAGG 2 cut(s) 6467, 10656
BsuI GTATCC 5 cut(s) 1145, 3096, 5252, 7639, 8150
BsuTUI ATCGAT 1 cut(s) 2175
BtgZI GCGATG 3 cut(s) 4874, 11820, 13826
BtsI GCAGTG 1 cut(s) 13825
CaiI CAGNNNCTG 6 cut(s) 961, 3850, 5756, 10307, 10747, 11924
CciI TCATGA 2 cut(s) 8019, 9135
CfoI GCGC 6 cut(s) 155, 226, 244, 4095, 12546, 13659
Cfr10I RCCGGY 7 cut(s) 149, 338, 819, 5938, 8850, 13060, 13350
ClaI ATCGAT 1 cut(s) 2175
CseI GACGC 6 cut(s) 3, 76, 967, 4882, 5762, 12719
CsiI ACCWGGT 3 cut(s) 3418, 6769, 7578
CspAI ACCGGT 3 cut(s) 5938, 8850, 13350
CspCI CAANNNNNGTGG 4 cut(s) 3984, 4019, 13821, 13856
DinI GGCGCC 1 cut(s) 225
DraI TTTAAA 3 cut(s) 2337, 3054, 11727
DraIII CACNNNGTG 1 cut(s) 3422
DrdI GACNNNNNNGTC 1 cut(s) 25
DriI GACNNNNNGTC 2 cut(s) 11371, 14270
DseDI GACNNNNNNGTC 1 cut(s) 25
EagI CGGCCG 2 cut(s) 340, 14297
Eam1105I GACNNNNNGTC 2 cut(s) 11371, 14270
Ecl136II GAGCTC 2 cut(s) 127, 13942
EclXI CGGCCG 2 cut(s) 340, 14297
Eco105I TACGTA 2 cut(s) 4826, 13267
Eco147I AGGCCT 3 cut(s) 329, 6152, 9859
Eco24I GRGCYC 9 cut(s) 129, 765, 4920, 4931, 6250, 10446, 10805, 12816, 13944
Eco31I GGTCTC 7 cut(s) 1168, 5369, 7597, 10494, 11909, 13446, 14278
Eco32I GATATC 2 cut(s) 9332, 12725
Eco52I CGGCCG 2 cut(s) 340, 14297
Eco53kI GAGCTC 2 cut(s) 127, 13942
Eco81I CCTNAGG 2 cut(s) 6467, 10656
Eco88I CYCGRG 4 cut(s) 2309, 5664, 7071, 12290
EcoICRI GAGCTC 2 cut(s) 127, 13942
EcoNI CCTNNNNNAGG 2 cut(s) 7548, 9917
EcoRI GAATTC 9 cut(s) 3737, 4227, 5876, 6881, 7345, 7815, 8003, 11749, 12475
EcoRV GATATC 2 cut(s) 9332, 12725
EcoT38I GRGCYC 9 cut(s) 129, 765, 4920, 4931, 6250, 10446, 10805, 12816, 13944
EgeI GGCGCC 1 cut(s) 225
EheI GGCGCC 1 cut(s) 225
Esp3I CGTCTC 2 cut(s) 12, 2981
FauI CCCGC 8 cut(s) 247, 299, 1205, 4594, 5601, 9603, 10963, 13711
FauNDI CATATG 3 cut(s) 3660, 10758, 11512
FbaI TGATCA 6 cut(s) 3225, 3481, 4630, 7474, 8860, 11593
FblI GTMKAC 4 cut(s) 17, 1891, 13269, 14263
FriOI GRGCYC 9 cut(s) 129, 765, 4920, 4931, 6250, 10446, 10805, 12816, 13944
FspI TGCGCA 1 cut(s) 4094
GlaI GCGC 6 cut(s) 154, 225, 243, 4094, 12545, 13658
GsaI CCCAGC 3 cut(s) 4469, 5372, 14010
HaeII RGCGCY 3 cut(s) 156, 227, 13660
HgaI GACGC 6 cut(s) 3, 76, 967, 4882, 5762, 12719
HhaI GCGC 6 cut(s) 155, 226, 244, 4095, 12546, 13659
Hin1I GRCGYC 4 cut(s) 5, 14, 224, 12824
Hin6I GCGC 6 cut(s) 153, 224, 242, 4093, 12544, 13657
HinP1I GCGC 6 cut(s) 153, 224, 242, 4093, 12544, 13657
Hpy99I CGWCG 5 cut(s) 19, 115, 146, 394, 1179
Hsp92I GRCGYC 4 cut(s) 5, 14, 224, 12824
HspAI GCGC 6 cut(s) 153, 224, 242, 4093, 12544, 13657
KasI GGCGCC 1 cut(s) 223
KflI GGGWCCC 2 cut(s) 915, 2014
KpnI GGTACC 1 cut(s) 13182
KroI GCCGGC 1 cut(s) 149
KroNI GCCGGC 1 cut(s) 151
Ksp22I TGATCA 6 cut(s) 3225, 3481, 4630, 7474, 8860, 11593
LguI GCTCTTC 1 cut(s) 1347
MabI ACCWGGT 3 cut(s) 3418, 6769, 7578
MbiI CCGCTC 1 cut(s) 5238
MfeI CAATTG 9 cut(s) 909, 1449, 4449, 5787, 6528, 10362, 12675, 13416, 13500
MlsI TGGCCA 9 cut(s) 324, 2139, 4419, 6346, 9390, 9748, 11244, 12403, 14211
MluNI TGGCCA 9 cut(s) 324, 2139, 4419, 6346, 9390, 9748, 11244, 12403, 14211
Mly113I GGCGCC 1 cut(s) 224
Mox20I TGGCCA 9 cut(s) 324, 2139, 4419, 6346, 9390, 9748, 11244, 12403, 14211
MroNI GCCGGC 1 cut(s) 149
MroXI GAANNNNTTC 8 cut(s) 1393, 1458, 2814, 4623, 8099, 10901, 11100, 12219
MscI TGGCCA 9 cut(s) 324, 2139, 4419, 6346, 9390, 9748, 11244, 12403, 14211
MslI CAYNNNNRTG 6 cut(s) 1845, 2764, 5044, 5113, 5379, 7591
Msp20I TGGCCA 9 cut(s) 324, 2139, 4419, 6346, 9390, 9748, 11244, 12403, 14211
MspA1I CMGCKG 7 cut(s) 7373, 10526, 13718, 13924, 13964, 14006, 14180
MspCI CTTAAG 1 cut(s) 7301
MunI CAATTG 9 cut(s) 909, 1449, 4449, 5787, 6528, 10362, 12675, 13416, 13500
MvnI CGCG 5 cut(s) 70, 81, 242, 4893, 12544
NaeI GCCGGC 1 cut(s) 151
NarI GGCGCC 1 cut(s) 224
NciI CCSGG 4 cut(s) 468, 752, 4581, 12752
NcoI CCATGG 6 cut(s) 1034, 3272, 8267, 8657, 9244, 12895
NdeI CATATG 3 cut(s) 3660, 10758, 11512
NgoMIV GCCGGC 1 cut(s) 149
NheI GCTAGC 3 cut(s) 4105, 10343, 13142
NmeAIII GCCGAG 3 cut(s) 2614, 10433, 13979
NsbI TGCGCA 1 cut(s) 4094
NspV TTCGAA 4 cut(s) 4588, 5391, 5780, 5863
OliI CACNNNNGTG 1 cut(s) 2764
PaeI GCATGC 5 cut(s) 1727, 3355, 5193, 5515, 8932
PaeR7I CTCGAG 3 cut(s) 2309, 5664, 7071
PagI TCATGA 2 cut(s) 8019, 9135
PaqCI CACCTGC 3 cut(s) 1273, 2674, 9043
PasI CCCWGGG 4 cut(s) 1651, 5184, 5592, 10060
PceI AGGCCT 3 cut(s) 329, 6152, 9859
PciI ACATGT 7 cut(s) 2357, 3900, 5374, 6429, 8757, 12801, 13786
PciSI GCTCTTC 1 cut(s) 1347
PcsI WCGNNNNNNNCGW 2 cut(s) 3288, 5869
PdiI GCCGGC 1 cut(s) 151
PdmI GAANNNNTTC 8 cut(s) 1393, 1458, 2814, 4623, 8099, 10901, 11100, 12219
PflFI GACNNNGTC 1 cut(s) 4376
PflMI CCANNNNNTGG 3 cut(s) 3422, 4682, 9956
PfoI TCCNGGA 9 cut(s) 466, 1310, 4287, 4681, 5099, 5244, 6872, 11851, 13480
PinAI ACCGGT 3 cut(s) 5938, 8850, 13350
PluTI GGCGCC 1 cut(s) 227
Ppu21I YACGTR 3 cut(s) 3677, 4826, 13267
PpuMI RGGWCCY 4 cut(s) 915, 2014, 4098, 10865
PscI ACATGT 7 cut(s) 2357, 3900, 5374, 6429, 8757, 12801, 13786
PshAI GACNNNNGTC 3 cut(s) 48, 5637, 5757
PshBI ATTAAT 2 cut(s) 5858, 9629
PsiI TTATAA 3 cut(s) 2484, 3939, 12911
Psp124BI GAGCTC 2 cut(s) 129, 13944
Psp1406I AACGTT 2 cut(s) 3266, 11521
Psp5II RGGWCCY 4 cut(s) 915, 2014, 4098, 10865
PspFI CCCAGC 3 cut(s) 4465, 5368, 14006
PspOMI GGGCCC 3 cut(s) 4927, 10442, 12812
PspPPI RGGWCCY 4 cut(s) 915, 2014, 4098, 10865
PspXI VCTCGAGB 2 cut(s) 5664, 7071
PsrI GAACNNNNNNTAC 2 cut(s) 970, 1002
PstI CTGCAG 7 cut(s) 2302, 5152, 8812, 9400, 10558, 12857, 14005
PstNI CAGNNNCTG 6 cut(s) 961, 3850, 5756, 10307, 10747, 11924
PsyI GACNNNGTC 1 cut(s) 4376
PvuII CAGCTG 5 cut(s) 7373, 10526, 13924, 13964, 14006
RseI CAYNNNNRTG 6 cut(s) 1845, 2764, 5044, 5113, 5379, 7591
SacI GAGCTC 2 cut(s) 129, 13944
SalI GTCGAC 2 cut(s) 16, 14262
SapI GCTCTTC 1 cut(s) 1347
ScaI AGTACT 8 cut(s) 2549, 4720, 5359, 8284, 10172, 12198, 12345, 12458
SexAI ACCWGGT 3 cut(s) 3418, 6769, 7578
SfoI GGCGCC 1 cut(s) 225
Sfr274I CTCGAG 3 cut(s) 2309, 5664, 7071
SfuI TTCGAA 4 cut(s) 4588, 5391, 5780, 5863
SlaI CTCGAG 3 cut(s) 2309, 5664, 7071
SmiMI CAYNNNNRTG 6 cut(s) 1845, 2764, 5044, 5113, 5379, 7591
SnaBI TACGTA 2 cut(s) 4826, 13267
SpeI ACTAGT 2 cut(s) 6382, 13550
SphI GCATGC 5 cut(s) 1727, 3355, 5193, 5515, 8932
SseBI AGGCCT 3 cut(s) 329, 6152, 9859
SspDI GGCGCC 1 cut(s) 223
SstI GAGCTC 2 cut(s) 129, 13944
StuI AGGCCT 3 cut(s) 329, 6152, 9859
TaqII GACCGA 3 cut(s) 38, 775, 9282
TauI GCSGC 4 cut(s) 73, 614, 12533, 13908
TspGWI ACGGA 8 cut(s) 151, 287, 572, 1211, 3280, 3939, 8846, 13556
Tth111I GACNNNGTC 1 cut(s) 4376
Van91I CCANNNNNTGG 3 cut(s) 3422, 4682, 9956
Vha464I CTTAAG 1 cut(s) 7301
VneI GTGCAC 3 cut(s) 3003, 4040, 5127
VspI ATTAAT 2 cut(s) 5858, 9629
XagI CCTNNNNNAGG 2 cut(s) 7548, 9917
XbaI TCTAGA 4 cut(s) 2156, 8602, 9020, 9319
XcmI CCANNNNNNNNNTGG 2 cut(s) 6276, 12716
XhoI CTCGAG 3 cut(s) 2309, 5664, 7071
XmaJI CCTAGG 1 cut(s) 9289
XmiI GTMKAC 4 cut(s) 17, 1891, 13269, 14263
XmnI GAANNNNTTC 8 cut(s) 1393, 1458, 2814, 4623, 8099, 10901, 11100, 12219
ZraI GACGTC 1 cut(s) 12825
ZrmI AGTACT 8 cut(s) 2549, 4720, 5359, 8284, 10172, 12198, 12345, 12458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.