Prokaryotic RING finger family 4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23110 |
| fragaria_vesca | FvH4_4g36870 FvH4_4g36870 FvH4_4g36870 |
| malus_domestica | MD16G1001800.v1.1 |
| prunus_persica | Prupe.1G347000_v2.0.a1 |
| pyrus_communis | pycom16g00380 |
| rosa_chinensis | RchiOBHm_Chr4g0446631 |
| rosa_laevigata | RLG00000005643 |
| rosa_multiflora | Rmu_sc0001753.1_g000045 |
| rosa_roxburghii | Rroxscaffold_5G00387020 |
| rosa_rugosa | Rorug04G0373500 |
| rosa_samantha | Rh4AG434700 Rh4BG443800 Rh4CG461100 Rh4DG442600 |
| rosa_wichuraiana | Rw4G037170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 2484, 3939, 12902 |
| AarI | CACCTGC | 3 cut(s) | 1273, 2674, 9031 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 25 |
| AatII | GACGTC | 1 cut(s) | 13698 |
| Acc16I | TGCGCA | 1 cut(s) | 4094 |
| Acc65I | GGTACC | 1 cut(s) | 13169 |
| AccB1I | GGYRCC | 5 cut(s) | 223, 1261, 3234, 11039, 13169 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 3422, 4682, 9944 |
| AccBSI | CCGCTC | 1 cut(s) | 5238 |
| AccI | GTMKAC | 4 cut(s) | 17, 184, 1891, 13260 |
| AccII | CGCG | 7 cut(s) | 70, 81, 242, 3178, 4893, 6813, 12535 |
| AclI | AACGTT | 2 cut(s) | 3266, 11512 |
| AcyI | GRCGYC | 4 cut(s) | 5, 14, 224, 13695 |
| AdeI | CACNNNGTG | 2 cut(s) | 2828, 3422 |
| AflII | CTTAAG | 1 cut(s) | 7301 |
| AflIII | ACRYGT | 9 cut(s) | 2357, 3676, 3900, 5374, 6429, 7714, 8757, 12792, 13777 |
| AgeI | ACCGGT | 2 cut(s) | 8850, 13341 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 11362 |
| AhlI | ACTAGT | 3 cut(s) | 6382, 6733, 13541 |
| AjiI | CACGTC | 1 cut(s) | 12658 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 423, 455, 3511, 3543, 10572, 10604 |
| AleI | CACNNNNGTG | 1 cut(s) | 2764 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1207, 1239 |
| Alw44I | GTGCAC | 3 cut(s) | 3003, 4040, 5127 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 961, 5756, 10738, 11915 |
| Ama87I | CYCGRG | 2 cut(s) | 5664, 7071 |
| ApaI | GGGCCC | 3 cut(s) | 4931, 10437, 12807 |
| ApaLI | GTGCAC | 3 cut(s) | 3003, 4040, 5127 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 4364, 4396, 5405, 5437, 14068, 14100 |
| AsiGI | ACCGGT | 2 cut(s) | 8850, 13341 |
| Asp700I | GAANNNNTTC | 9 cut(s) | 1393, 1458, 2814, 4442, 4623, 8099, 10892, 11091, 12210 |
| Asp718I | GGTACC | 1 cut(s) | 13169 |
| AspA2I | CCTAGG | 1 cut(s) | 9277 |
| AspLEI | GCGC | 7 cut(s) | 155, 226, 244, 4095, 6815, 12537, 13650 |
| AsuC2I | CCSGG | 8 cut(s) | 101, 468, 752, 4581, 5246, 5369, 6933, 12743 |
| AsuII | TTCGAA | 6 cut(s) | 1169, 4588, 5391, 5780, 5863, 6395 |
| AsuNHI | GCTAGC | 2 cut(s) | 4105, 10334 |
| AvaI | CYCGRG | 2 cut(s) | 5664, 7071 |
| AvaII | GGWCC | 9 cut(s) | 915, 2014, 3650, 3992, 4098, 4220, 4385, 4686, 10856 |
| AvrII | CCTAGG | 1 cut(s) | 9277 |
| AxyI | CCTNAGG | 1 cut(s) | 6467 |
| BaeGI | GKGCMC | 7 cut(s) | 3007, 3239, 4044, 4931, 5131, 10437, 12807 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3056, 3089, 11455, 11488 |
| BamHI | GGATCC | 2 cut(s) | 12890, 13310 |
| BanI | GGYRCC | 5 cut(s) | 223, 1261, 3234, 11039, 13169 |
| BauI | CACGAG | 6 cut(s) | 3153, 6042, 8249, 8769, 9858, 13016 |
| BbvCI | CCTCAGC | 1 cut(s) | 7374 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 6605, 6639, 7255, 7289 |
| BciVI | GTATCC | 6 cut(s) | 1145, 1774, 3096, 5252, 7639, 8150 |
| BclI | TGATCA | 7 cut(s) | 3124, 3225, 3481, 4630, 7474, 8860, 11584 |
| BcnI | CCSGG | 8 cut(s) | 101, 468, 752, 4581, 5246, 5369, 6933, 12743 |
| BcuI | ACTAGT | 3 cut(s) | 6382, 6733, 13541 |
| BfoI | RGCGCY | 3 cut(s) | 156, 227, 13651 |
| BfrI | CTTAAG | 1 cut(s) | 7301 |
| BfuI | GTATCC | 6 cut(s) | 1145, 1774, 3096, 5252, 7639, 8150 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 3987, 7057 |
| BglII | AGATCT | 5 cut(s) | 1420, 1637, 4393, 8011, 8395 |
| BlnI | CCTAGG | 1 cut(s) | 9277 |
| BlpI | GCTNAGC | 3 cut(s) | 7256, 8702, 10518 |
| BmcAI | AGTACT | 7 cut(s) | 2549, 4720, 5359, 8284, 10160, 12189, 12449 |
| Bme18I | GGWCC | 9 cut(s) | 915, 2014, 3650, 3992, 4098, 4220, 4385, 4686, 10856 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 11362 |
| BmeT110I | CYCGRG | 2 cut(s) | 5664, 7071 |
| BmgBI | CACGTC | 1 cut(s) | 12658 |
| BmrI | ACTGGG | 3 cut(s) | 3233, 10783, 12801 |
| BmtI | GCTAGC | 2 cut(s) | 4109, 10338 |
| BmuI | ACTGGG | 3 cut(s) | 3233, 10783, 12801 |
| BoxI | GACNNNNGTC | 2 cut(s) | 48, 5637 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 12232, 12264, 13653, 13685 |
| Bpu10I | CCTNAGC | 1 cut(s) | 7374 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 7256, 8702, 10518 |
| Bpu14I | TTCGAA | 6 cut(s) | 1169, 4588, 5391, 5780, 5863, 6395 |
| BpuEI | CTTGAG | 9 cut(s) | 1067, 3470, 4223, 5501, 6050, 8498, 8638, 10175, 13566 |
| BpuMI | CCSGG | 8 cut(s) | 101, 468, 752, 4581, 5246, 5369, 6933, 12743 |
| Bsa29I | ATCGAT | 1 cut(s) | 2175 |
| BsaAI | YACGTR | 3 cut(s) | 3677, 4826, 13258 |
| BsaBI | GATNNNNATC | 4 cut(s) | 4968, 4992, 9378, 13590 |
| BsaHI | GRCGYC | 4 cut(s) | 5, 14, 224, 13695 |
| BsaI | GGTCTC | 8 cut(s) | 1168, 4802, 5369, 7597, 10485, 11900, 13437, 13461 |
| BsaWI | WCCGGW | 6 cut(s) | 22, 3895, 4327, 4695, 8850, 13341 |
| Bse118I | RCCGGY | 6 cut(s) | 149, 338, 819, 8850, 13051, 13341 |
| Bse21I | CCTNAGG | 1 cut(s) | 6467 |
| Bse8I | GATNNNNATC | 4 cut(s) | 4968, 4992, 9378, 13590 |
| BseCI | ATCGAT | 1 cut(s) | 2175 |
| BseJI | GATNNNNATC | 4 cut(s) | 4968, 4992, 9378, 13590 |
| BseRI | GAGGAG | 5 cut(s) | 3792, 7282, 8717, 10416, 13034 |
| BseSI | GKGCMC | 7 cut(s) | 3007, 3239, 4044, 4931, 5131, 10437, 12807 |
| BseX3I | CGGCCG | 1 cut(s) | 340 |
| BseYI | CCCAGC | 2 cut(s) | 6259, 13997 |
| BsgI | GTGCAG | 5 cut(s) | 974, 6533, 7065, 7785, 8772 |
| Bsh1236I | CGCG | 7 cut(s) | 70, 81, 242, 3178, 4893, 6813, 12535 |
| Bsh1285I | CGRYCG | 2 cut(s) | 181, 343 |
| BshNI | GGYRCC | 5 cut(s) | 223, 1261, 3234, 11039, 13169 |
| BshTI | ACCGGT | 2 cut(s) | 8850, 13341 |
| BshVI | ATCGAT | 1 cut(s) | 2175 |
| BsiEI | CGRYCG | 2 cut(s) | 181, 343 |
| BsiHKCI | CYCGRG | 2 cut(s) | 5664, 7071 |
| BsmBI | CGTCTC | 2 cut(s) | 12, 7244 |
| Bso31I | GGTCTC | 8 cut(s) | 1168, 4802, 5369, 7597, 10485, 11900, 13437, 13461 |
| BsoBI | CYCGRG | 2 cut(s) | 5664, 7071 |
| Bsp119I | TTCGAA | 6 cut(s) | 1169, 4588, 5391, 5780, 5863, 6395 |
| Bsp120I | GGGCCC | 3 cut(s) | 4927, 10433, 12803 |
| Bsp1407I | TGTACA | 7 cut(s) | 510, 1138, 2145, 3841, 6961, 9220, 13722 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 7256, 8702, 10518 |
| Bsp19I | CCATGG | 5 cut(s) | 1034, 3272, 8267, 8657, 12886 |
| BspDI | ATCGAT | 1 cut(s) | 2175 |
| BspFNI | CGCG | 7 cut(s) | 70, 81, 242, 3178, 4893, 6813, 12535 |
| BspHI | TCATGA | 2 cut(s) | 8019, 9123 |
| BspMAI | CTGCAG | 9 cut(s) | 2302, 4944, 5152, 8812, 9388, 10549, 12848, 13996, 14037 |
| BspOI | GCTAGC | 2 cut(s) | 4109, 10338 |
| BspQI | GCTCTTC | 1 cut(s) | 1347 |
| BspT104I | TTCGAA | 6 cut(s) | 1169, 4588, 5391, 5780, 5863, 6395 |
| BspT107I | GGYRCC | 5 cut(s) | 223, 1261, 3234, 11039, 13169 |
| BspTI | CTTAAG | 1 cut(s) | 7301 |
| BspTNI | GGTCTC | 8 cut(s) | 1168, 4802, 5369, 7597, 10485, 11900, 13437, 13461 |
| BsrBI | CCGCTC | 1 cut(s) | 5238 |
| BsrFI | RCCGGY | 6 cut(s) | 149, 338, 819, 8850, 13051, 13341 |
| BsrGI | TGTACA | 7 cut(s) | 510, 1138, 2145, 3841, 6961, 9220, 13722 |
| BssAI | RCCGGY | 6 cut(s) | 149, 338, 819, 8850, 13051, 13341 |
| BssNI | GRCGYC | 4 cut(s) | 5, 14, 224, 13695 |
| BssSI | CACGAG | 6 cut(s) | 3153, 6042, 8249, 8769, 9858, 13016 |
| Bst2BI | CACGAG | 6 cut(s) | 3153, 6042, 8249, 8769, 9858, 13016 |
| BstACI | GRCGYC | 4 cut(s) | 5, 14, 224, 13695 |
| BstAFI | CTTAAG | 1 cut(s) | 7301 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2755, 4259, 5195, 11339 |
| BstAUI | TGTACA | 7 cut(s) | 510, 1138, 2145, 3841, 6961, 9220, 13722 |
| BstBAI | YACGTR | 3 cut(s) | 3677, 4826, 13258 |
| BstBI | TTCGAA | 6 cut(s) | 1169, 4588, 5391, 5780, 5863, 6395 |
| BstEII | GGTNACC | 1 cut(s) | 4276 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 5480, 7548, 9905 |
| BstFNI | CGCG | 7 cut(s) | 70, 81, 242, 3178, 4893, 6813, 12535 |
| BstH2I | RGCGCY | 3 cut(s) | 156, 227, 13651 |
| BstHHI | GCGC | 7 cut(s) | 155, 226, 244, 4095, 6815, 12537, 13650 |
| BstMCI | CGRYCG | 2 cut(s) | 181, 343 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 48, 5637 |
| BstPI | GGTNACC | 1 cut(s) | 4276 |
| BstSLI | GKGCMC | 7 cut(s) | 3007, 3239, 4044, 4931, 5131, 10437, 12807 |
| BstSNI | TACGTA | 2 cut(s) | 4826, 13258 |
| BstUI | CGCG | 7 cut(s) | 70, 81, 242, 3178, 4893, 6813, 12535 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 5951, 11983 |
| BstZI | CGGCCG | 1 cut(s) | 340 |
| Bsu15I | ATCGAT | 1 cut(s) | 2175 |
| Bsu36I | CCTNAGG | 1 cut(s) | 6467 |
| BsuI | GTATCC | 6 cut(s) | 1145, 1774, 3096, 5252, 7639, 8150 |
| BsuTUI | ATCGAT | 1 cut(s) | 2175 |
| BtgZI | GCGATG | 4 cut(s) | 4874, 7398, 11811, 13817 |
| BtrI | CACGTC | 1 cut(s) | 12658 |
| BtsI | GCAGTG | 1 cut(s) | 13816 |
| CaiI | CAGNNNCTG | 4 cut(s) | 961, 5756, 10738, 11915 |
| CciI | TCATGA | 2 cut(s) | 8019, 9123 |
| CfoI | GCGC | 7 cut(s) | 155, 226, 244, 4095, 6815, 12537, 13650 |
| Cfr10I | RCCGGY | 6 cut(s) | 149, 338, 819, 8850, 13051, 13341 |
| Cfr42I | CCGCGG | 1 cut(s) | 3179 |
| ClaI | ATCGAT | 1 cut(s) | 2175 |
| CseI | GACGC | 6 cut(s) | 3, 76, 4882, 7261, 9513, 12710 |
| CsiI | ACCWGGT | 3 cut(s) | 3418, 6769, 7578 |
| CspAI | ACCGGT | 2 cut(s) | 8850, 13341 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 3984, 4019, 13812, 13847 |
| DinI | GGCGCC | 1 cut(s) | 225 |
| DraI | TTTAAA | 3 cut(s) | 2337, 3054, 11718 |
| DraIII | CACNNNGTG | 2 cut(s) | 2828, 3422 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 25 |
| DriI | GACNNNNNGTC | 1 cut(s) | 11362 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 25 |
| EagI | CGGCCG | 1 cut(s) | 340 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 11362 |
| Ecl136II | GAGCTC | 2 cut(s) | 127, 13933 |
| EclXI | CGGCCG | 1 cut(s) | 340 |
| Eco105I | TACGTA | 2 cut(s) | 4826, 13258 |
| Eco147I | AGGCCT | 2 cut(s) | 329, 9847 |
| Eco31I | GGTCTC | 8 cut(s) | 1168, 4802, 5369, 7597, 10485, 11900, 13437, 13461 |
| Eco32I | GATATC | 2 cut(s) | 9320, 12716 |
| Eco47I | GGWCC | 9 cut(s) | 915, 2014, 3650, 3992, 4098, 4220, 4385, 4686, 10856 |
| Eco52I | CGGCCG | 1 cut(s) | 340 |
| Eco53kI | GAGCTC | 2 cut(s) | 127, 13933 |
| Eco81I | CCTNAGG | 1 cut(s) | 6467 |
| Eco88I | CYCGRG | 2 cut(s) | 5664, 7071 |
| Eco91I | GGTNACC | 1 cut(s) | 4276 |
| EcoICRI | GAGCTC | 2 cut(s) | 127, 13933 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 5480, 7548, 9905 |
| EcoO65I | GGTNACC | 1 cut(s) | 4276 |
| EcoRI | GAATTC | 9 cut(s) | 3737, 4227, 5876, 6881, 7345, 7815, 8003, 11740, 12466 |
| EcoRV | GATATC | 2 cut(s) | 9320, 12716 |
| EgeI | GGCGCC | 1 cut(s) | 225 |
| EheI | GGCGCC | 1 cut(s) | 225 |
| Esp3I | CGTCTC | 2 cut(s) | 12, 7244 |
| FauI | CCCGC | 7 cut(s) | 247, 299, 4594, 5601, 9591, 10954, 13702 |
| FauNDI | CATATG | 3 cut(s) | 3660, 10749, 11503 |
| FbaI | TGATCA | 7 cut(s) | 3124, 3225, 3481, 4630, 7474, 8860, 11584 |
| FblI | GTMKAC | 4 cut(s) | 17, 184, 1891, 13260 |
| FspI | TGCGCA | 1 cut(s) | 4094 |
| GlaI | GCGC | 7 cut(s) | 154, 225, 243, 4094, 6814, 12536, 13649 |
| GsaI | CCCAGC | 2 cut(s) | 6263, 14001 |
| HaeII | RGCGCY | 3 cut(s) | 156, 227, 13651 |
| HgaI | GACGC | 6 cut(s) | 3, 76, 4882, 7261, 9513, 12710 |
| HhaI | GCGC | 7 cut(s) | 155, 226, 244, 4095, 6815, 12537, 13650 |
| Hin1I | GRCGYC | 4 cut(s) | 5, 14, 224, 13695 |
| Hin6I | GCGC | 7 cut(s) | 153, 224, 242, 4093, 6813, 12535, 13648 |
| HinP1I | GCGC | 7 cut(s) | 153, 224, 242, 4093, 6813, 12535, 13648 |
| HincII | GTYRAC | 8 cut(s) | 18, 61, 2623, 8112, 8796, 9253, 9868, 10222 |
| HindII | GTYRAC | 8 cut(s) | 18, 61, 2623, 8112, 8796, 9253, 9868, 10222 |
| Hpy99I | CGWCG | 5 cut(s) | 19, 115, 146, 394, 1179 |
| Hsp92I | GRCGYC | 4 cut(s) | 5, 14, 224, 13695 |
| HspAI | GCGC | 7 cut(s) | 153, 224, 242, 4093, 6813, 12535, 13648 |
| KasI | GGCGCC | 1 cut(s) | 223 |
| KflI | GGGWCCC | 3 cut(s) | 915, 2014, 4686 |
| KpnI | GGTACC | 1 cut(s) | 13173 |
| KroI | GCCGGC | 1 cut(s) | 149 |
| KroNI | GCCGGC | 1 cut(s) | 151 |
| Ksp22I | TGATCA | 7 cut(s) | 3124, 3225, 3481, 4630, 7474, 8860, 11584 |
| KspI | CCGCGG | 1 cut(s) | 3179 |
| LguI | GCTCTTC | 1 cut(s) | 1347 |
| MabI | ACCWGGT | 3 cut(s) | 3418, 6769, 7578 |
| MbiI | CCGCTC | 1 cut(s) | 5238 |
| MfeI | CAATTG | 8 cut(s) | 1449, 4449, 5787, 6528, 10353, 12666, 13407, 13491 |
| Mly113I | GGCGCC | 1 cut(s) | 224 |
| MroNI | GCCGGC | 1 cut(s) | 149 |
| MroXI | GAANNNNTTC | 9 cut(s) | 1393, 1458, 2814, 4442, 4623, 8099, 10892, 11091, 12210 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1845, 2764, 4529, 5044, 5113, 5379, 7591 |
| MspA1I | CMGCKG | 8 cut(s) | 3178, 6259, 7373, 10517, 13709, 13915, 13955, 13997 |
| MspCI | CTTAAG | 1 cut(s) | 7301 |
| MunI | CAATTG | 8 cut(s) | 1449, 4449, 5787, 6528, 10353, 12666, 13407, 13491 |
| MvnI | CGCG | 7 cut(s) | 70, 81, 242, 3178, 4893, 6813, 12535 |
| NaeI | GCCGGC | 1 cut(s) | 151 |
| NarI | GGCGCC | 1 cut(s) | 224 |
| NciI | CCSGG | 8 cut(s) | 101, 468, 752, 4581, 5246, 5369, 6933, 12743 |
| NcoI | CCATGG | 5 cut(s) | 1034, 3272, 8267, 8657, 12886 |
| NdeI | CATATG | 3 cut(s) | 3660, 10749, 11503 |
| NgoMIV | GCCGGC | 1 cut(s) | 149 |
| NheI | GCTAGC | 2 cut(s) | 4105, 10334 |
| NmeAIII | GCCGAG | 2 cut(s) | 10424, 13970 |
| NsbI | TGCGCA | 1 cut(s) | 4094 |
| NspV | TTCGAA | 6 cut(s) | 1169, 4588, 5391, 5780, 5863, 6395 |
| OliI | CACNNNNGTG | 1 cut(s) | 2764 |
| PaeI | GCATGC | 3 cut(s) | 3355, 5193, 8932 |
| PaeR7I | CTCGAG | 2 cut(s) | 5664, 7071 |
| PagI | TCATGA | 2 cut(s) | 8019, 9123 |
| PaqCI | CACCTGC | 3 cut(s) | 1273, 2674, 9031 |
| PasI | CCCWGGG | 3 cut(s) | 1651, 5592, 10048 |
| PceI | AGGCCT | 2 cut(s) | 329, 9847 |
| PciI | ACATGT | 7 cut(s) | 2357, 3900, 5374, 6429, 7714, 8757, 12792 |
| PciSI | GCTCTTC | 1 cut(s) | 1347 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 5869 |
| PdiI | GCCGGC | 1 cut(s) | 151 |
| PdmI | GAANNNNTTC | 9 cut(s) | 1393, 1458, 2814, 4442, 4623, 8099, 10892, 11091, 12210 |
| PflFI | GACNNNGTC | 1 cut(s) | 4376 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 3422, 4682, 9944 |
| PfoI | TCCNGGA | 8 cut(s) | 466, 1310, 4287, 5099, 5244, 6872, 11842, 13471 |
| PinAI | ACCGGT | 2 cut(s) | 8850, 13341 |
| PluTI | GGCGCC | 1 cut(s) | 227 |
| Ppu21I | YACGTR | 3 cut(s) | 3677, 4826, 13258 |
| PpuMI | RGGWCCY | 5 cut(s) | 915, 2014, 4098, 4686, 10856 |
| PscI | ACATGT | 7 cut(s) | 2357, 3900, 5374, 6429, 7714, 8757, 12792 |
| PshAI | GACNNNNGTC | 2 cut(s) | 48, 5637 |
| PsiI | TTATAA | 3 cut(s) | 2484, 3939, 12902 |
| Psp124BI | GAGCTC | 2 cut(s) | 129, 13935 |
| Psp1406I | AACGTT | 2 cut(s) | 3266, 11512 |
| Psp5II | RGGWCCY | 5 cut(s) | 915, 2014, 4098, 4686, 10856 |
| PspEI | GGTNACC | 1 cut(s) | 4276 |
| PspFI | CCCAGC | 2 cut(s) | 6259, 13997 |
| PspOMI | GGGCCC | 3 cut(s) | 4927, 10433, 12803 |
| PspPPI | RGGWCCY | 5 cut(s) | 915, 2014, 4098, 4686, 10856 |
| PspXI | VCTCGAGB | 2 cut(s) | 5664, 7071 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 970, 1002 |
| PstI | CTGCAG | 9 cut(s) | 2302, 4944, 5152, 8812, 9388, 10549, 12848, 13996, 14037 |
| PstNI | CAGNNNCTG | 4 cut(s) | 961, 5756, 10738, 11915 |
| PsyI | GACNNNGTC | 1 cut(s) | 4376 |
| PvuII | CAGCTG | 6 cut(s) | 6259, 7373, 10517, 13915, 13955, 13997 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1845, 2764, 4529, 5044, 5113, 5379, 7591 |
| SacI | GAGCTC | 2 cut(s) | 129, 13935 |
| SacII | CCGCGG | 1 cut(s) | 3179 |
| SalI | GTCGAC | 1 cut(s) | 16 |
| SapI | GCTCTTC | 1 cut(s) | 1347 |
| ScaI | AGTACT | 7 cut(s) | 2549, 4720, 5359, 8284, 10160, 12189, 12449 |
| SexAI | ACCWGGT | 3 cut(s) | 3418, 6769, 7578 |
| SfoI | GGCGCC | 1 cut(s) | 225 |
| Sfr274I | CTCGAG | 2 cut(s) | 5664, 7071 |
| Sfr303I | CCGCGG | 1 cut(s) | 3179 |
| SfuI | TTCGAA | 6 cut(s) | 1169, 4588, 5391, 5780, 5863, 6395 |
| SgrBI | CCGCGG | 1 cut(s) | 3179 |
| SinI | GGWCC | 9 cut(s) | 915, 2014, 3650, 3992, 4098, 4220, 4385, 4686, 10856 |
| SlaI | CTCGAG | 2 cut(s) | 5664, 7071 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1845, 2764, 4529, 5044, 5113, 5379, 7591 |
| SnaBI | TACGTA | 2 cut(s) | 4826, 13258 |
| SpeI | ACTAGT | 3 cut(s) | 6382, 6733, 13541 |
| SphI | GCATGC | 3 cut(s) | 3355, 5193, 8932 |
| SseBI | AGGCCT | 2 cut(s) | 329, 9847 |
| SspDI | GGCGCC | 1 cut(s) | 223 |
| SspI | AATATT | 8 cut(s) | 1366, 1685, 1942, 5315, 5915, 6351, 8300, 12460 |
| SstI | GAGCTC | 2 cut(s) | 129, 13935 |
| StuI | AGGCCT | 2 cut(s) | 329, 9847 |
| TaqII | GACCGA | 3 cut(s) | 38, 775, 9270 |
| TauI | GCSGC | 3 cut(s) | 73, 614, 13899 |
| TspGWI | ACGGA | 7 cut(s) | 212, 287, 572, 1211, 3939, 8846, 13547 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4376 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 3422, 4682, 9944 |
| Vha464I | CTTAAG | 1 cut(s) | 7301 |
| VneI | GTGCAC | 3 cut(s) | 3003, 4040, 5127 |
| VpaK11BI | GGWCC | 9 cut(s) | 915, 2014, 3650, 3992, 4098, 4220, 4385, 4686, 10856 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 5480, 7548, 9905 |
| XbaI | TCTAGA | 4 cut(s) | 2156, 8602, 9008, 9307 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 6276, 12707 |
| XhoI | CTCGAG | 2 cut(s) | 5664, 7071 |
| XmaJI | CCTAGG | 1 cut(s) | 9277 |
| XmiI | GTMKAC | 4 cut(s) | 17, 184, 1891, 13260 |
| XmnI | GAANNNNTTC | 9 cut(s) | 1393, 1458, 2814, 4442, 4623, 8099, 10892, 11091, 12210 |
| ZraI | GACGTC | 1 cut(s) | 13696 |
| ZrmI | AGTACT | 7 cut(s) | 2549, 4720, 5359, 8284, 10160, 12189, 12449 |