Rh4BG443800

Prokaryotic RING finger family 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0014456
Physical Location & Seq
Forward (+)
58366338 .. 58384282
17945 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG443800.1

Sequence Viewer

Length: 13761 bp
ATGAAAACGCCCTTTTCCGGGACTCTATTCCGGTTCCCTTTGAGGAATGCGGAGCAGGCGGCGACCAGTAAGCTTTCCAGGCAAGAATACTCCGAAGACGACCTCTCTTCCTTGTTGCTTCAACTGTATGAGGAAGGCATTTTCACATTGCTTTTCCTCAAAAGTGTCTTGCGCATCGAAATGTATGTGTGGGACGCCCAGGACTCTGAGCCGAGGAAGCTTTATTCGTGCTCTGTCAGTTCTGCAAGTGATGATATTGTTCGGCATCGGCAGGCAGTGTTGAGATTTCCCAAGTCGGTAAATTCTACAGAGAGTCAGGTGGACTGCTATTCAGTGGACTTTGTAAGGGAGGCAATGATAGGGACCCAATCGCAGAAGAAGACAGATAGTTTTTATCTTGTACAAGCACTGGCATCCACATCCAGTAGGATTGGCAAATTTGCAGCTACTGCTTCTAAGGAATATGATATGCACTTGCTGCCGTGGGCATCAGTTGCTGCTTGCATCACAGATAATTCAGAACAGAATGATGCTCTTAGGCTAGGTCAGGCATTCTGTTTCCTTCCTCTGCCTGTAAGAACTGGTTTGAGTGTACAAGTGAATGGATACTTTGAGGTTTCATCGAATCGTCGTGGCATCTGGTATGGGGCTGATATGGACAGAAGTGGAAAAATTCGTTCTGTCTGGAACAGGCTTCTTCTAGAAGAGGTTGTGGCGCCTGCATTTACACAACTTCTTCTGGGCATACGAGGACTGCTAGATTCGAGGAAATTGTACTATTCCTTATGGCCAAGTGGTTCTTTTGAAGAGCCATGGAATATTCTTGTTGAGCATATATACAGAAACATTTCTAATGCTCCTGTGTTATATTCGGAACTTGAAGGTGGAAAATGGGTGGCACCTGTCGAAGCTTTTCTACATGATCAGGAAGTTACTAAGAGCAAGGAACTTGGTGAGGCCCTGATTGAGCTAGGAATGCCTATTGTGGGTTTGCCTAACAATTTATTTGACATGCTCTTGAAATATGCTTCCACTTATAGGCAGAAGGTGGTCACTCCTGATACAGTACGTTGTTTCCTCAGGGAGTGCAGATTTCTTTCTACTCTTGGTAAAGCTTACAAGCTTGTATTGTTGGAATATTGTCTTGAAGATTTGCTTGATGCTGATGTTGGGACACATGCTTATAATCTGCCTTTGCTTCCATTGGCAAATGGTGAATTTGGATTGTTATCAGAAGCCTCAAAAGGAATTTCCTATTTCATTTGCAGTGATTTAGAGTTCAGGCTGCTTCAACAAATATATGATAGAATAGTTGATCGGGATATTCCTATCAATCTACTACATAGACTCTCTGCTATTGCGAAGTCCTCAAAGGCAAACCTTGTTATTTTCAATGTTCAGTACTTTCTTCAATTTTATCCAAGATTTGTACCTGCTGACTGGAAGTATAAAAGCAAAGTGCTCTGGGACCCAGAGTCTTGTCATAATCACCCTACTTCTTCATGGTTTGTGCTATTCTGGCAATATCTTCGGAATCAATGCGATAAGTTGTCTATTTTTAGTGATTGGCCTATTTTGCCTTCTACTTCTGGCCATCTGTATAGAGCCTCTAGAGAGTCAAAATTGATGAATGCAGAAAAGCTTTCAGACAAGGTGCAAGGCGTACTCGTTAAAATTGGTTGCAAGATTCTGAACCCAAATTATGGAGTTGAACACTCAGATTTATTTCATTATGTAAGTGATGGTAATGCTACAGGCCTTGTCGAATCCATATATGATGTTGTCTCTTTGAATTGTGGCACCATAGCAACATGTTTTCATAGTCTGGAAGCGGAAGAGAGGGATGAACTTCGTTCATTTCTTCTTGACCCGAAGTGGTATTTTGGAGCCTGTTTGAATGAGTCTGCCATACGTAATTGCAAGAGGCTGCCTATCTATAAAGTGTATGGTGGAGGATCTACTCAAAGTTTCCAATTCTCAGATCTTGAAAGTCCGCGAAAGTACTTACCACCGTTAGACATTCCTGAGTGCTTCCTTGGAACTGAGTTCCTTATTAGCTCAGATACTGAGCTGCAGATTCTGTTAAGATACTATGGTATTGAAAGGATGGGGAAGGCACTCTTCTACAAGCAGCAGGTTTTGAATAGAGTTGGGGAGCTGCAACCTGAGGTACGGAACAACATTGTTCTATCCATTCTACAAAACCTACCACAGCTGTGTGTTGAGGACACATCGTTCAGGGAATATTTGAGAAACTTGGAATTTCTCCCAACCCTGAGTGGTGCTCTTAGATGTCCTACTGCATTATATGATCCTCGTAATGAAGAATTATATGCACTATTAGATGATTCTGATAGTTTTCCCTACGGTCCATTCCAAGAGCCTGGTGTTTTGGACATGCTGCAAGGTTTGGGCCTTAGAACATCTGTGACCCCTGAGACGGTCATACAAAGTGCTCGACAGGTTGAACGATTAATGCATGAGGATCAGCAAAAGGCACATCTAAAAGGGAAGGTGCTTCTGTCATATTTAGAAGTTAATGCAATGAAATGGATACCCAATCTGTTAAATGGTGATCAAGGAACAGTGAACAGAATGTTCTCACGAGCTGCAACTGCATTCAGACCTCGTAACTTAAAATCTGATCTTGAGAAGTTCTGGAATGATCTTCGGCTGGTCTCTTGGTGCCCAGTTTTAGTTTCTGCTCCATTTCCAACTTTGCCGTGGCCTGTTGTGTCATCCACAGTTGCTCCTCCAAAGCTTGTGAGATTGCAAGCCGACATGTGGCTTGTTTCAGCTAGCATGCGAATTCTAGATGGAGAGTGCTCATCTACAGCGCTATCGTCTAGCCTTGGGTGGTCTTCTCCACCAGGTGGAAGTGTCATTGCAGCGCAACTACTGGAGCTTGGGAAAAACAATGAGATTGTGAATGATCAGGTTCTCCGGCAGGAGTTAGCTGTGGCTATGCCTAGGATATATTCAATACTGGCAGGTTTGATTGGTTCTGATGAGATGGACATAGTAAAGGCTGTCCTTGAGGGCAGCCGGTGGATTTGGGTGGGAGATGGATTTGCAACTGTAGATGAGGTTGTCCTTAATGGTCCCATTCATCTGGCTCCTTATATACGTGTTATACCTGTCGATCTAGCAGTTTTTAAGGAACTATTTTTGGAGCTTGGCATTCGAGAATTCCTGAAGCCTACAGACTATGCTAATATTTTGTGCAGAATGGCTTTGAAGAAAGGATCCTCTCCTCTCGACGCACAGGAAATCCGAGCAGCCTTATTGATTGTCCAGCATCTAGCTGAAGTTCAGATACATGACCAGAAAGTTAAAATTTATTTACCAGATGTATCAGGCAGATTATATCCTGCTGGTGACTTAGTTTATAATGATGCCCCTTGGTTGCTTGGGTCAGAGGATCATGATAGCCCTTTTGGTGGTTCATCTAATATGCCACTTAATGCAAGGAGAACAGTTCAAAAATTTGTGCATGGGAACATATCTATTGATGTTGCAGAGAAGCTTGGTGTCTGCTCTCTTCGTAGGATATTGCTGGCTGAGAGTGCCGATTCAATGAATCTGAGTTTATCTGGTGCTGCTGAAGCTTTTGGACAGCACGAAGCACTGACAACTAGACTTAAACACATACTTGAAATGTATGCAGATGGACCTGGAATTCTTTTTGAGCTGGTTCAAAATGCAGAGGATGCTGGAGCTTCTGAGGTGAACTTTCTCCTGGACAAAACTCAATATGGGACTTCTTCAGTACTTTCACCTGAAATGGCAGATTGGCAAGGCCCTGCGTTGTACTGTTTCAATGACTCTGTCTTCAGTCCCCAAGATCTGTATGCAATCTCACGCATTGGCCAGGAGAGCAAGCTAGAAAAACCTTTTGCTATAGGGAGATTTGGACTGGGTTTTAATTGTGTCTACCATTTTACAGACATTCCCACATTTGTTTCTGGCGAAAACATTGTTATGTTTGATCCTCATGCCTGTAATCTACCTGGGATCTCTCCCTCTCACCCTGGCTTAAGGATAAAATTTTCTGGAAGAAAGATTATGGAACAATTTCCTGATCAGTTTTCTCCTTTTTTACACTTTGGCTGTGACTTGCAGCATCCATTTCCTGGAACTCTTTTCCGGTTTCCTCTTAGGAGTGCTAGTGCTGCTTCCCGAAGCCAAATAAAGAAAGAAGGATATGCACCTGAAGATGTCATGTCCCTTTTTTCTTCCTTTGCAAAAGTTGTTTCTGAGACGTTACTTTTTCTGCGTAATGTGAAAGTCATCTCTGTTTTTGTAAAGGAAGGAAGTGGACATGAAATGCAACTTTTACATCGGGTCAACAAGCATTGCAATAGTGAGCCTGAAATGGAATCCAATGCGCGACAGGATGTGTTTAGTCTTTTTGATGGTAATCGGCATAATGGAATGGATAAAGAGCAATTTCTAAAGAAATTGAGAAAATCAGCAGATAAAGATTTGCCATACAAGTGTCAGAAGGTTATAATTACAGAGGAAAGCTCATCTGGTAATGTATCACACAGCTGGATAACCTCTGAGTGTATAGGTGGTGGACAGGCAAAGAAGAAATTCCCAGTTTTTAGTGACAAGTCTCATACTTATTTCCCCTGGGCATGTGTTGCTGCATATTTATACTCTTCCAAGGTTGGTTTGCAAACAAATGATATCTCGGAGAACAACGAGACCTGTGCTGTTACTTCCAATTTATTTCAAGTCCCTCCAGGCCCCTCTGAAGATAGAAAAGATCTTGAGGGCCGTGCTTTCTGTTTTCTACCACTGCCAATTACTACTGGTCTTCCAGCACATGTTAATGCTTATTTCGAGTTATCGTCAAATAGGAGGGACATCTGGTTTGGTAATGACATGGCTGGTGGTGGAAAGAAGCGCTCAGATTGGAATATGTACTTGCTTGAAGGAGTAGTTGCCCCTGCTTATGGGCATATGCTAGAGAAAATTGCACCTGAAATTGGCCCATGTGAGTTGTTCTTTTCACTTTGGCCTAAAACAAGAGGATTGGAACCTTGGGCTTTAGTGGTGCGGGAACTTTATATGTTTATTGCTGATTGTGGCCTTCGTGTATTATATACAAAAGCTCGAGGAGGCCAGTGGATCTCAACCAAACAAGCTATATTTCCTGACTTTACTTTCGACAAGGTTGATGAGCTTATTGAAGCATTATCAGATGCTGGTCTACCTCTGGTCACTGTTTCCAAGCCAATTGTTGAGAGGTTTATGGATGTGTGCCCTGCCTTGCATTTTTTGACACCAGAGTTGTTGAAGACTTTGTTAATTCGAAGGAAACGGGAATTTAAGGATAGAAACACAATGGTATTGGCCCTTGAATATTGTTTACTTGACTTGAAGATGCCTGTTCAATCTGCTGGTTTGTATGGTTTGCCTTTATTACCCCTTGCTGATGGTTCATTTACCATAATCGACAAAAAGGGGATTGGGGAAAGAATATATATCGCACGAGGGGATGAGTATGATCTTCTCAAGGATTCGGTTCCAAATCTACTTGTAGATTGCACAATTCCTGGAGGAGTTTATGAGAAGCTGTGTTACATAGCCCAAAGCGAGGCCTCCAATATTTCTTTTCTGTCATGTCTTTTACTGGAGAAACTCTTTTTAAGAATACTTCCTGCAGAGTGGCATCATGCAAAACAGGTGACATGGGCTCCTGGTCAGCAAGGTCAACCGAGTTTAGAGTGGGTAAGACTTCTCTGGAGCTATTTGAGGTCATCTTGTGATGACTTGTCACTTTTTTCTAAATGGCCAATATTGCCTGTTGGTAACAATTGTCTCTTGCAACTAGTTGACAATTCAAACATAATAAAGGATGATGGGTGGAGTGAGAAGATGTCAGCTTTGTTGCTGAAAATAGGATGCGTTTTCCTGAGGCACGACCTTGCAGTAGATCATCCTCAGTTGAAAAGATTTGTGCAGTTGCCAACAGCAATTGGCTTATTGAATGCGTTTCTGGCAGTTGCAGGTAAGCCAGAGAACATTGAGGGGCTTTTTAACGATGCAACAGAAGGAGAGATGCATGAACTTCGGAGTTTCATTCTTCAGTCCAAGTGGTTTATCGAAGAGAAAATGGAAGATAAGCATATTGACATCATGAAACACCTTCCTATGTTTGAGTCATATAAGAGCAGAAAGTTTGTAAGTTTGAGTAATCCTGTCAAATTGCTTAAACCTGGTGATATTCAGGAGGATTTTCTGAGTGATGACTTTGTACGCACGGAATCAGAGAAAGAAAAAATTATTTTGAGAAGATATTTAGAGATTGAAGAACCCTCCAGGATGGAATTCTACAGAGATCATTTGCTTAACCGTATGTCAAAATTCCTATCAGAGCAAGGATCTCTTACAGCCATTCTCCATGGAGTGCAGGTTTTAGTTGAAGAGGATAATTCTTTGAAATCTGCAATTTCTGAAATACCTTTCGTTTTGGCGGCTGATGGATCTTGGCAGAAGCCTTCCCGGCTCTATGATCCTAGAGTCGCTGCTTTAAGAAAGGTGCTACATGGAGAAGTTTTTTTCCCTTCTGACAAGTTCTCAGATACCGAGACTCTGGATATATTGAATACACTTGGTCTCAGAAAAACTCTGGGCTATTCTGGTTTAATTGATTGTGCTAGATCAGTTTCATTGCTGCATTTTTCAAGGGATTCAGAGACACTAAGTTATGGGAGAAAGTTACTTGTTTGTTTAGATGCTCTATCATGTAAGCTCTCAACTGAGGAAGAAGGAAATCTTGATGAGTCAACGAATTCTGTTTTCCAAAACGACACTAGAACCGAAGATGGTGATGTTATGTACATTGAGTCTCCCAAGAGCAATGAGAACATAAAAATTGATGATCGGGAGATAAATTCTTTTGTTGACGACTTGATTGGTGATAAACCAGAAGAGGACTTTTGGTCTGAAATGAGGGCTATTGCTTGGTGTCCTGTATGTGTTGATCCACCTCTCAAAGGAATCCCATGGTTGAAATCCAGTAACCAGGTGGCATCCCCGAGCAATGTGAGACCTAAATCCCAGATGTTTATGGTTTCCTACTCGATGCATATACTAGATGGTGTATGCCGCTCAACATACCTACAAAAAAAGCTTGGCTGGATGGATCCACCGAACATAAATGTTTTGTCCACGCAGTTGATTGAGCTACCTAAGCTGTATTTTCAGCTTAAATCACATTCAGCTGATATCCAAGATGTCGATGCTGCACTTTGTGAGGGAATTCCATCACTCTATTCAAAATTGCAAGAATATATTGGCACTGATGAATTTTCGGACCTAGAATTAGCATTACATGGTGTTTCCTGGGTTTGGATCGGGGATAACTTTGTAGCTCCAAATGCACTTGCATTTGATTCGCCTGTGAAATTTACTCCATACTTGTATGTTGTCCCATCTGAATTATCGGAATTCAGAGATTTGCTGATAAAGTTAGGCGTACGAATTAGTTTTGATATATGGGACTATTTGCATGTCTTGCAACGCTTGCAGAATGATGTGAAAGGATTCCCACTGTCAACAGATCAGTTAAATTTTGCGCATTGTGTCCTTGATGCTGTAGCAGACTGTTGCTCAGAGAAACCACCATTTGAAGCTTCTAACACTCCAATGTTAATTCCAGATTTTTCTGGAGTTCTGATGGATGCTGGCGATCTTGTGTATAATGATGCACCATGGATGGAACACAGTACTCTTGTGGGGAAACATTTTGTACATCCAACTATCAGCAATGATCTGGCAAATAGATTGGGGGTACAGTCACTTCGTAGCCTCTCTTTAGTTGATGATGAAATGACTAAAGATATTCCGTGCATGGACTATGCTAGAATAAAAGAGCTTTTAGCTTCATATGGGGACAATGACTTGTTATTGTTTGACCTGCTTGAGTTGGCAGATTGTTGCAAAGCTAATAAGTTGCACCTAATCTTTGACAAGAGGGAACATCCTCGGCAGTCTTTGCTGCAGCACAATATGGGGGAATTTCAAGGGCCGGCCTTATTAGCCATATTGGAAGGAGCGAACTTGAGTAGAGAGGAAGTAAGTAGTCTCCAATTTTTACCTCCATGGAGACTAAGGGGTGCTACTGTGAACTATGGTTTGGCTTTGCTTAGCTGCTATTTTGTCTGTGATCTCCTCTCTGTTGTTTCTGGTGGCTACTTTTATATGTTTGATCCCCGTGGTTCAGTGCTTGCTGCACCTTCAAGTTGTACTCCTGCGGCTAAAATGTTTTCTCTGACAGGTACAAATTTAACTGATCGGTTTCGTGATCAATTTAATCCTATGCTGATTGGCCACAGTATGCCATGGCCATCATCGGATTCTACTATTATTCGCATGCCTCTATCATCTGAATGTTTGATTAATGAACTTGAGTTTGGATTAAGAAAAATAAAGCAGATTACTGAGAGATTTTTGGAGCACTCTTCTAGATCACTTTTATTCTTGAAGTCAGTAATGCAGGTGTCGATCTCCACATGGGAGGAAGGAAGTGCACAGCCATGTCAGGACTATTCAGTTAGCATTGATTCATCATCTGCTATCATGAGGAATCCATTTTCGGAAAAGAAATGGAGGAAGTTCCAAATATCCCGATTATTTAATAGCTTCAATGCTGCAACAAAATTGCAAGTAATAGATGTGAACTTGAACCAAGGCAAAGCAAGAGTTGTTGATCGATGGCTTGTTGCACTTAGCCTGGGATCTGGGCAAACAAGAAATATGGCTCTTGATAGGCGTTATCTGGCATACAACTTGACACCTGTCGCTGGAGTTGCAGCACATATATCCCGAGATGGCTATCCTGTTGATGTTTGTCTAACGAGTTCTATCATGTCCCCTCTTCCTTTGTCTGGAGGTATAAATATACCTGTTACTGTTCTTGGATGCTTCCTGGTTTGTCACAATGGAGGTCGCTCTCTCTTTAATTATCAAGACAAAGAAGCTTCTTCAGCAGAGGCACGTGTGGATGCTGGAAATCTGTTAATGGAAGCTTGGAACAAAGAGCTGATGTCATGTGTTCGTGATTCCTACGTCGAATTGATATTGGAAATCCAGAGGTTAAGAATAGATCCTTCTAGTTCCGCAACTGAATCAAGTGCAGGTCTTGCAGTCAGCCTGTCTTTGAAGGGCTATGGAGATCAAATTTATTCCTTTTGGCCGAGGTCTAACAGGCATAATTTGGCCAAACAACCAGGAGATGGCAGTATACCTTCAATTGAAGTGCCTAAATCAGATTGGGAATGTGTAATTGAACAGGTGATAAGTCCTTTTTATGCTCGTATAGTTGATCTTCCTGTGTGGCAACTTTACTCAGGAAATTTTGCCAAGGCTGAAGAGGGTATGTTTCTTTCACAACCTGGACATGGGGTGGGTGGGAACTTACTTCCGGCTACAGTTTGCAGCTTTGTAAAGGAGCACTACCCAGTGTTTTCAGTACCTTGGGAGTTGGTGACCGAAATCCAAGCCCTGGGGATTACAGTTCGGGAAGTGAAACCAAAGATGGTTCGGAATCTGTTAAGAGCTTCTTCATCATCTATTGTTCTCCGATCAGTTGATATGTATGCAGATGTTCTTGAGTACTGCTTGTCTGATATTGAGATTGGAGATTCATTCAATTCAGCTGGAAATTCTCTGACAGTTGACAACAGTAACACTAGAGGGGATAGCCAAGTTGTTGGTGGGAGTTCTGCTTCCCAGTCAGTTACTAATTTGCATACTTATCCAGCATCTTCTACACAGAATGCTACCAGTTCAGGAGATGCAATTGAGATGGTGACAAGTTTGGGCAAGGCTTTACTTGATTTTGGCCGGGGAGTCGTTGAGGATATTGGTAGGTCTGGGGGGCCCTTGGTTCAGAGGAACATGGTTGCAGGTAGTAGTAACAGCATCTATGGAAATGGAGACATGAATCTTCTATCGATAGCAGCTGAACTCAAAGGTTTGCCATGTCCAACTGCAGCAAACCGTTTAACTAAGTTGGGGTTTACTGAACTTTGGGTTGGGAATTCAGAGCAGCAGGCATTGATGGTTTCCTTGGCTGAAAAGTTTGTTCACCCTAAAGTATTGGATAGATCAATCCTTGCTGACATATTTTCAAATGGTGTGCTACAATCATTATTAAAACTGCGAAGTTTCTCTCTTCATTTACTGGCCAGTCATATGAAGTTCGTTTTTCAGGATAACTGGGCGAGTTATGTAATGGGCTCAAATATGGTTCCTTGGTTTTCATGGGAGAATAGTAAATCAAGCTCTGGTGGTGAAGGTGGTCCTTCTCCTGAATGGATACGGCTCTTCTGGAAGAACTTCAATGGCTCTTCGGAAGATCTTTTGCTCTTTTATGATTGGCCTCTAATTCCTGCTTTTCTTGGTCGGCCAATCTTATGCCGTGTCAGGGAGCGTGACTTGGTCTTCATTCCACCACTTCTTATCGATCCAACTTCAGAAGAAAATGCTTTGGAAACGAGTGCAACTGGAAGCAATCATATGCCTGAATCTGAATCAATTCAAGCATACATTTCAGCTTTTGAAGTAGCTAAAAACCAACACCCTTGGTTGTTATCACTTCTGAATCACTGCAACATACCTATATTTGATATAGGTTTTTTACACTGTGCTGCCCCAAGCAACTGCTTCCCTCCCCCTGACCAATCATTAGGGCAAGTTATTGCTTCTAAGTTGGTTGCAGCTAAAAATGCTGGCTATTTCTCCGAAGTCACTTCCCTTTCAGCTTCAAATTGTGATGCACTTTTTGCACTTTTTGCTAATGATTTCTTGTCTAATGGCTCTAATTACAGAAGGGAAGAACTTGAAGTTTTGCGTTCACTTCCTATTTATAAAACAGTTGTGGGTTCTTACACACGATTGATCAGTGATGATCTGTGTATGATCTCCACAAATTCATTCCTTAAGCCCTATGATGAACGTTGTCTTTCCTATACCACTGATTCAGTTGAATTTGCATTACTTCGAGCACTTGGAGTCCCTGAATTGCATGATCAACAGATTTTAATTAGGTTTGGGTTGCCTGGGTTTGAAGGTAAGCCTGAACCTGAAAAGGAAGATATATTGATATATCTTTACACAAATTGGCAAGATCTCCAAATGGATACCGCTGTAGTTGAAGCTTTAAAGGAGACTAAATTTGTAAGGAATGCTGATGAGTTTTGCACAGATCTGTATAAGCCCAAGGATTTATTTGATCCTGGTGATGCTTTATTAACATCTGTTTTCTCTGGTGAGAGGAAAAAGTTTCCAGGAGAAAGGTTTTTTGCTGATCGGTGGCTTCGAATTTTAAGGAAAACTGGCCTACGAACTGCAATAGAATCTGATGTAATACTTGAATGTGCCAAAAGAGTGGAATTTCTTGGAAGTGAATGCATGAGATCCAGAGATTTGGATGATTTTGACGACCTAACCAACTCTCAGAGTGAAGTTTCCATGGAAGTATGGACGTTAGCTGGATCTGTTGTTGAAGCAATTTTCTCGAACTTTGCTGTCCTCTACGGCAACAACTTCTGTGATCTCCTTGGAAAGATTAAATGCATACCTGCTGAATTTGGCTTTCCAAATGTCGCTGGAAAAAAAGGTGGCAAGAGAGTGCTCACTTCATATAGTGAAGCTATTCTGCTAAGGGATTGGCCTCTGGCTTGGAGCTGTGCTCCCATTCTTTCGAGACAAAATGTTGTTCCTCCCGATTACTCTTGGGGATCCCTCCAGCTTAGGAGCCCTCCAGCTTTTCCTACAGTAATAAAGCACTTGCAGATTATTGGGAGAAATGGTGGTGAAGACACACTTGCTCATTGGCCGACTGTGTCTGGTATGATGACTGTTGATGAAGCTTCTTGTGAGGTGTTGAAGTACCTGGATAAGATTTGGAATTCTCTCTCTTCTTCAGATATAATGGACTTACAGAGAGTACCATTTATACCTGCTGCAAATGGTACACGCTTGGTGACTGCGAACCTGCTTTTTGCCCGCCTAACAATTAACTTATCCCCATTTGCGTTTGAACTTCCTACATCATATCTTCCCTTTTTGAAGATTTTAAAAGATTTGGGACTTCAGGACATGCTATCGATTGCCTCTGCAAGGGATCTTCTCTTGAATCTTCAGAAAACTTGTGGATATCAACGTCTAAATCCAAATGAACTCCGTGCTGTGCTAGAAATTTTGTATTTTATCTGTGAGGGGGTTACTGCAGATGACATGTCTAATGGCCCCAATTGGACATCAGCAGCAATAGTCCCTGATGATAGCTGCAGACTAGTTCATGTGAAATCCTGTGTGTATATTGATTCCCATGGATCCCGATTTGTAAAGTGCATTGACCCGTCCAGGTTAAGATTTATTCACCCAGATCTTCCAGAGAGATTTTGTACTGTTCTGGGAATCAAGAAGCTGTCTGATGTAGTCATAGAGGAATTAGATCACGAGGAACATGTGGAAACTTTGGATCATATTGGATCAGTTCCAATTGTAGCCATTCGAGAGAAACTGTTGAGCAAGTCACTTCAGAGTGCTGTATGGACAGTTGTAAACAGCATGGCTAGTTACATTCCTGCAATTAAGCATTTAACTGTGGAAACCATACAAAACTTATTAGAATCTGTTGCGGAAAAGTTGCAGTTTGTTAAGTGCCTCCATACTCGCTTTTTGCTCCTCCCACATTCTGTAGACATTACCCATGCTGCTAAGGATTCCATCATTCCAGAGTGGGTCAATGGATCCATGCATCGGACACTTTACTTCATCAACCGGACTAACACCTGTATATTAGTTTCTGAACCACCACCTTATATTTCTGTTTTTGATGTTATTGCAATTGTTGTGAGTCTGGTCTTAGGGTCCCCTACTCCTTTACCTATTGGATCTTTATTCGTCTGTCCTGGAGGCTCTGAAACTGCAATCGTTGATCTTTTGAAACTTTGTTCTGACAAGCAAGAAATGGAAGCCACCAGTGGAAGCAATGGCTTGGTAGGTAAAGAACTGTTACCCCAAGATGTTCATCAAGTACAGTTTCATCCATTGAGACCCTTTTACGCTGGAGAGATAGTGGCATGGCGGTCTCAGAATGGAGAAAAGCTCAAATATGGTAGAGTTCCAGAGGATGTCCGGCCGTCAGCTGGCCAAGCATTGTATAGATTCAAGGTGGAGACTTCACTGGGTTTTATGCAACCTCTTCTATCTTCTCATGTCTTCTCGTTTAAAAGTGTAGCGATGGGAAGTGAGACTTTACCAGTGTCTATGGATGATGTTCATACAATGGATCACAGCAGAACTCGTATTGACATGCCAGAAACTTCTGGAAGTGGCAAATCAAGAGCTTCTCAGCCGCAAGCTGGCAAAGACCTGCAGTATGGCCGAGTATCACCTGCAGAACTGGTGCAAGCAGTACAAGAGATGCTCTCTGCTGCTGGGATTTATATGGATGTGGAGAAGCAGTCCCTACTGCAAAAAACATTAACGCTGCAAGAACAATTAAAAGAGTCCCAGACTTCACTTCTGCTTGAACAGGAAAAGGCTGATGTTGCAGCAAAAGAAGCTGATACAGCAAAAGCAGCATGGGTTTGCAGGGTCTGCTTGAGCGCTGAAGTTGACATAACAATAGTTCCTTGTGGTCATGTACTTTGCCGGAGGTGCTCGTCTGCCGTTTCCAGGTGTCCATTTTGTCGGCTCCAGGTTTCAAAAACTCTGAGAATTTTTCGGCCATAA

Protein Analysis

4586

Amino Acids

513.0

Weight (kDa)

5.5

Isoelectric Point (pI)

46.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 3 - 75 1.1e-15 Sacsin domain
SACS PF25794 1207 - 1443 2e-77 Sacsin domain
SACS PF25794 2625 - 2854 3.7e-25 Sacsin domain
zf-C3HC4_3 PF13920 4540 - 4579 6.4e-09 Zinc finger, C3HC4 type (RING finger)
Prok-RING_4 PF14447 4540 - 4580 6.2e-06 Prokaryotic RING finger family 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014456)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23110
fragaria_vesca FvH4_4g36870 FvH4_4g36870 FvH4_4g36870
malus_domestica MD16G1001800.v1.1
prunus_persica Prupe.1G347000_v2.0.a1
pyrus_communis pycom16g00380
rosa_chinensis RchiOBHm_Chr4g0446631
rosa_laevigata RLG00000005643
rosa_multiflora Rmu_sc0001753.1_g000045
rosa_roxburghii Rroxscaffold_5G00387020
rosa_rugosa Rorug04G0373500
rosa_samantha Rh4AG434700 Rh4BG443800 Rh4CG461100 Rh4DG442600
rosa_wichuraiana Rw4G037170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1185, 3390, 4511, 10884
AarI CACCTGC 2 cut(s) 8500, 13429
Acc16I TGCGCA 2 cut(s) 173, 7590
AccB1I GGYRCC 4 cut(s) 715, 898, 1799, 2685
AccB7I CCANNNNNTGG 5 cut(s) 1703, 2873, 4133, 9248, 9517
AccBSI CCGCTC 1 cut(s) 7122
AccI GTMKAC 4 cut(s) 3933, 5218, 9256, 12723
AccII CGCG 2 cut(s) 1996, 4390
AclI AACGTT 1 cut(s) 10972
AcvI CACGTG 1 cut(s) 9011
AcyI GRCGYC 2 cut(s) 195, 716
AdeI CACNNNGTG 2 cut(s) 2873, 7265
AfeI AGCGCT 3 cut(s) 2838, 4913, 13636
AflII CTTAAG 2 cut(s) 4036, 10955
AflIII ACRYGT 7 cut(s) 1811, 2781, 3127, 4831, 9010, 12255, 12487
AhdI GACNNNNNGTC 2 cut(s) 1474, 6952
AhlI ACTAGT 2 cut(s) 5839, 12313
AjuI GAANNNNNNNTTGG 6 cut(s) 8132, 8164, 8409, 8441, 10032, 10064
AleI CACNNNNGTG 1 cut(s) 2215
AloI GAACNNNNNNTCC 2 cut(s) 2219, 2251
Alw44I GTGCAC 1 cut(s) 8541
AlwNI CAGNNNCTG 6 cut(s) 449, 497, 2066, 2080, 5213, 13626
Ama87I CYCGRG 3 cut(s) 5121, 7048, 8838
Aor51HI AGCGCT 3 cut(s) 2838, 4913, 13636
ApaI GGGCCC 1 cut(s) 9897
ApaLI GTGCAC 1 cut(s) 8541
ArsI GACNNNNNNTTYG 4 cut(s) 4862, 4894, 5156, 5188
AseI ATTAAT 2 cut(s) 2474, 8412
Asp700I GAANNNNTTC 8 cut(s) 847, 912, 4074, 4595, 7556, 10352, 10551, 11670
AspA2I CCTAGG 1 cut(s) 2969
AspLEI GCGC 8 cut(s) 174, 718, 2839, 2893, 4390, 4914, 7591, 13637
AsuC2I CCSGG 3 cut(s) 19, 6514, 9860
AsuII TTCGAA 2 cut(s) 5320, 11335
AsuNHI GCTAGC 1 cut(s) 2798
AvaI CYCGRG 3 cut(s) 5121, 7048, 8838
AvaII GGWCC 8 cut(s) 363, 1468, 2369, 3101, 3671, 7327, 10316, 12894
AvrII CCTAGG 1 cut(s) 2969
AxyI CCTNAGG 3 cut(s) 1079, 2166, 5924
BaeGI GKGCMC 4 cut(s) 2690, 5273, 8545, 9897
BaeI ACNNNNGTAYC 4 cut(s) 2080, 2113, 11148, 11181
BalI TGGCCA 9 cut(s) 790, 1593, 3870, 5803, 8343, 8359, 9233, 10202, 13176
BamHI GGATCC 5 cut(s) 3245, 7156, 11756, 12353, 12773
BanI GGYRCC 4 cut(s) 715, 898, 1799, 2685
BanII GRGCYC 4 cut(s) 5707, 9897, 10256, 11777
BarI GAAGNNNNNNTAC 8 cut(s) 900, 932, 3300, 3332, 5573, 5605, 7797, 7829
BauI CACGAG 3 cut(s) 2604, 5499, 12479
BbrPI CACGTG 1 cut(s) 9011
BbsI GAAGAC 9 cut(s) 102, 386, 2853, 3823, 4814, 5312, 10450, 11841, 13237
BceAI ACGGC 8 cut(s) 466, 2707, 4767, 10352, 10419, 11569, 13150, 13682
BciVI GTATCC 4 cut(s) 599, 2547, 10326, 11149
BclI TGATCA 7 cut(s) 922, 2575, 2932, 4081, 8317, 10914, 11044
BcnI CCSGG 3 cut(s) 19, 6514, 9860
BcuI ACTAGT 2 cut(s) 5839, 12313
BfoI RGCGCY 4 cut(s) 719, 2840, 4915, 13638
BfrI CTTAAG 2 cut(s) 4036, 10955
BfuI GTATCC 4 cut(s) 599, 2547, 10326, 11149
BglI GCCNNNNNGGC 1 cut(s) 6514
BglII AGATCT 7 cut(s) 1981, 3844, 4771, 10372, 11143, 11221, 12406
BlnI CCTAGG 1 cut(s) 2969
BlpI GCTNAGC 1 cut(s) 8159
BmcAI AGTACT 5 cut(s) 1403, 2003, 3771, 7741, 9629
Bme18I GGWCC 8 cut(s) 363, 1468, 2369, 3101, 3671, 7327, 10316, 12894
BmeRI GACNNNNNGTC 2 cut(s) 1474, 6952
BmeT110I CYCGRG 3 cut(s) 5121, 7048, 8838
BmrI ACTGGG 7 cut(s) 2684, 3926, 4595, 9467, 9739, 10243, 13220
BmtI GCTAGC 1 cut(s) 2802
BmuI ACTGGG 7 cut(s) 2684, 3926, 4595, 9467, 9739, 10243, 13220
BoxI GACNNNNGTC 1 cut(s) 8810
BpiI GAAGAC 9 cut(s) 102, 386, 2853, 3823, 4814, 5312, 10450, 11841, 13237
Bpu10I CCTNAGC 4 cut(s) 7203, 11678, 11768, 12741
Bpu1102I GCTNAGC 1 cut(s) 8159
Bpu14I TTCGAA 2 cut(s) 5320, 11335
BpuEI CTTGAG 9 cut(s) 2669, 3056, 4796, 5507, 7955, 8095, 8441, 9644, 13651
BpuMI CCSGG 3 cut(s) 19, 6514, 9860
Bsa29I ATCGAT 4 cut(s) 8725, 9968, 10479, 12125
BsaAI YACGTR 3 cut(s) 1913, 3128, 9011
BsaBI GATNNNNATC 4 cut(s) 1228, 4419, 8847, 13053
BsaHI GRCGYC 2 cut(s) 195, 716
BsaI GGTCTC 6 cut(s) 2683, 4703, 6632, 7054, 13072, 13119
BsaWI WCCGGW 3 cut(s) 30, 4146, 12804
Bse118I RCCGGY 2 cut(s) 3045, 8041
Bse21I CCTNAGG 3 cut(s) 1079, 2166, 5924
Bse8I GATNNNNATC 4 cut(s) 1228, 4419, 8847, 13053
BseCI ATCGAT 4 cut(s) 8725, 9968, 10479, 12125
BseJI GATNNNNATC 4 cut(s) 1228, 4419, 8847, 13053
BseRI GAGGAG 6 cut(s) 2742, 3243, 5139, 5583, 8174, 12698
BseSI GKGCMC 4 cut(s) 2690, 5273, 8545, 9897
BseX3I CGGCCG 1 cut(s) 13163
BseYI CCCAGC 1 cut(s) 13463
BsgI GTGCAG 7 cut(s) 1108, 3244, 5990, 6440, 7242, 8229, 9168
Bsh1236I CGCG 2 cut(s) 1996, 4390
Bsh1285I CGRYCG 1 cut(s) 13166
BshNI GGYRCC 4 cut(s) 715, 898, 1799, 2685
BshVI ATCGAT 4 cut(s) 8725, 9968, 10479, 12125
BsiEI CGRYCG 1 cut(s) 13166
BsiHKCI CYCGRG 3 cut(s) 5121, 7048, 8838
BsiWI CGTACG 1 cut(s) 7489
BsmBI CGTCTC 2 cut(s) 2432, 4253
Bso31I GGTCTC 6 cut(s) 2683, 4703, 6632, 7054, 13072, 13119
BsoBI CYCGRG 3 cut(s) 5121, 7048, 8838
Bsp119I TTCGAA 2 cut(s) 5320, 11335
Bsp120I GGGCCC 1 cut(s) 9893
Bsp1407I TGTACA 4 cut(s) 400, 592, 6849, 7762
Bsp1720I GCTNAGC 1 cut(s) 8159
Bsp19I CCATGG 8 cut(s) 812, 6412, 7016, 7724, 8114, 8354, 11487, 12349
BspDI ATCGAT 4 cut(s) 8725, 9968, 10479, 12125
BspFNI CGCG 2 cut(s) 1996, 4390
BspHI TCATGA 3 cut(s) 3424, 6147, 8592
BspMAI CTGCAG 8 cut(s) 2076, 5674, 8016, 10009, 12250, 12311, 13404, 13426
BspOI GCTAGC 1 cut(s) 2802
BspQI GCTCTTC 3 cut(s) 801, 10346, 10369
BspT104I TTCGAA 2 cut(s) 5320, 11335
BspT107I GGYRCC 4 cut(s) 715, 898, 1799, 2685
BspTI CTTAAG 2 cut(s) 4036, 10955
BspTNI GGTCTC 6 cut(s) 2683, 4703, 6632, 7054, 13072, 13119
BsrBI CCGCTC 1 cut(s) 7122
BsrFI RCCGGY 2 cut(s) 3045, 8041
BsrGI TGTACA 4 cut(s) 400, 592, 6849, 7762
BssAI RCCGGY 2 cut(s) 3045, 8041
BssNAI GTATAC 1 cut(s) 9257
BssNI GRCGYC 2 cut(s) 195, 716
BssSI CACGAG 3 cut(s) 2604, 5499, 12479
Bst1107I GTATAC 1 cut(s) 9257
Bst2BI CACGAG 3 cut(s) 2604, 5499, 12479
BstACI GRCGYC 2 cut(s) 195, 716
BstAFI CTTAAG 2 cut(s) 4036, 10955
BstAUI TGTACA 4 cut(s) 400, 592, 6849, 7762
BstBAI YACGTR 3 cut(s) 1913, 3128, 9011
BstBI TTCGAA 2 cut(s) 5320, 11335
BstEII GGTNACC 1 cut(s) 9499
BstENI CCTNNNNNAGG 2 cut(s) 7005, 12136
BstFNI CGCG 2 cut(s) 1996, 4390
BstH2I RGCGCY 4 cut(s) 719, 2840, 4915, 13638
BstHHI GCGC 8 cut(s) 174, 718, 2839, 2893, 4390, 4914, 7591, 13637
BstMCI CGRYCG 1 cut(s) 13166
BstPAI GACNNNNGTC 1 cut(s) 8810
BstPI GGTNACC 1 cut(s) 9499
BstSLI GKGCMC 4 cut(s) 2690, 5273, 8545, 9897
BstSNI TACGTA 1 cut(s) 1913
BstUI CGCG 2 cut(s) 1996, 4390
BstV2I GAAGAC 9 cut(s) 102, 386, 2853, 3823, 4814, 5312, 10450, 11841, 13237
BstXI CCANNNNNNTGG 5 cut(s) 2384, 3112, 9725, 11404, 11443
BstZ17I GTATAC 1 cut(s) 9257
BstZI CGGCCG 1 cut(s) 13163
Bsu15I ATCGAT 4 cut(s) 8725, 9968, 10479, 12125
Bsu36I CCTNAGG 3 cut(s) 1079, 2166, 5924
BsuI GTATCC 4 cut(s) 599, 2547, 10326, 11149
BsuTUI ATCGAT 4 cut(s) 8725, 9968, 10479, 12125
BtgZI GCGATG 1 cut(s) 13280
BtsI GCAGTG 4 cut(s) 282, 1273, 4802, 10621
CaiI CAGNNNCTG 6 cut(s) 449, 497, 2066, 2080, 5213, 13626
CciI TCATGA 3 cut(s) 3424, 6147, 8592
CfoI GCGC 8 cut(s) 174, 718, 2839, 2893, 4390, 4914, 7591, 13637
Cfr10I RCCGGY 2 cut(s) 3045, 8041
ClaI ATCGAT 4 cut(s) 8725, 9968, 10479, 12125
CseI GACGC 2 cut(s) 203, 3269
CsiI ACCWGGT 3 cut(s) 2869, 6226, 7035
DinI GGCGCC 1 cut(s) 717
DraI TTTAAA 3 cut(s) 11178, 12096, 13255
DraIII CACNNNGTG 2 cut(s) 2873, 7265
DriI GACNNNNNGTC 2 cut(s) 1474, 6952
EagI CGGCCG 1 cut(s) 13163
Eam1105I GACNNNNNGTC 2 cut(s) 1474, 6952
EclXI CGGCCG 1 cut(s) 13163
Eco105I TACGTA 1 cut(s) 1913
Eco147I AGGCCT 2 cut(s) 1758, 5609
Eco24I GRGCYC 4 cut(s) 5707, 9897, 10256, 11777
Eco31I GGTCTC 6 cut(s) 2683, 4703, 6632, 7054, 13072, 13119
Eco32I GATATC 3 cut(s) 4693, 7240, 12176
Eco47I GGWCC 8 cut(s) 363, 1468, 2369, 3101, 3671, 7327, 10316, 12894
Eco47III AGCGCT 3 cut(s) 2838, 4913, 13636
Eco52I CGGCCG 1 cut(s) 13163
Eco72I CACGTG 1 cut(s) 9011
Eco81I CCTNAGG 3 cut(s) 1079, 2166, 5924
Eco88I CYCGRG 3 cut(s) 5121, 7048, 8838
Eco91I GGTNACC 1 cut(s) 9499
EcoNI CCTNNNNNAGG 2 cut(s) 7005, 12136
EcoO109I RGGNCCY 8 cut(s) 363, 958, 1468, 3800, 4751, 9893, 9894, 12894
EcoO65I GGTNACC 1 cut(s) 9499
EcoRI GAATTC 9 cut(s) 2808, 3188, 3678, 6338, 6802, 7272, 7460, 10054, 11926
EcoRV GATATC 3 cut(s) 4693, 7240, 12176
EcoT22I ATGCAT 6 cut(s) 2481, 6075, 7101, 11429, 11594, 12783
EcoT38I GRGCYC 4 cut(s) 5707, 9897, 10256, 11777
EgeI GGCGCC 1 cut(s) 717
EheI GGCGCC 1 cut(s) 717
Esp3I CGTCTC 2 cut(s) 2432, 4253
FauI CCCGC 2 cut(s) 5058, 12032
FauNDI CATATG 4 cut(s) 4968, 7900, 10209, 10533
FbaI TGATCA 7 cut(s) 922, 2575, 2932, 4081, 8317, 10914, 11044
FblI GTMKAC 4 cut(s) 3933, 5218, 9256, 12723
FriOI GRGCYC 4 cut(s) 5707, 9897, 10256, 11777
FseI GGCCGGCC 1 cut(s) 8045
FspI TGCGCA 2 cut(s) 173, 7590
GlaI GCGC 8 cut(s) 173, 717, 2838, 2892, 4389, 4913, 7590, 13636
GsaI CCCAGC 1 cut(s) 13467
HaeII RGCGCY 4 cut(s) 719, 2840, 4915, 13638
HgaI GACGC 2 cut(s) 203, 3269
HhaI GCGC 8 cut(s) 174, 718, 2839, 2893, 4390, 4914, 7591, 13637
Hin1I GRCGYC 2 cut(s) 195, 716
Hin6I GCGC 8 cut(s) 172, 716, 2837, 2891, 4388, 4912, 7589, 13635
HinP1I GCGC 8 cut(s) 172, 716, 2837, 2891, 4388, 4912, 7589, 13635
HincII GTYRAC 8 cut(s) 4348, 5723, 5845, 6798, 6916, 7569, 9691, 13645
HindII GTYRAC 8 cut(s) 4348, 5723, 5845, 6798, 6916, 7569, 9691, 13645
Hpy99I CGWCG 3 cut(s) 633, 3263, 9086
HpyCH4IV ACGT 9 cut(s) 1069, 1912, 3127, 4262, 9010, 9081, 10972, 11501, 12181
HpySE526I ACGT 9 cut(s) 1069, 1912, 3127, 4262, 9010, 9081, 10972, 11501, 12181
Hsp92I GRCGYC 2 cut(s) 195, 716
HspAI GCGC 8 cut(s) 172, 716, 2837, 2891, 4388, 4912, 7589, 13635
KasI GGCGCC 1 cut(s) 715
KflI GGGWCCC 3 cut(s) 363, 1468, 12894
KroI GCCGGC 1 cut(s) 8041
KroNI GCCGGC 1 cut(s) 8043
Ksp22I TGATCA 7 cut(s) 922, 2575, 2932, 4081, 8317, 10914, 11044
LguI GCTCTTC 3 cut(s) 801, 10346, 10369
MabI ACCWGGT 3 cut(s) 2869, 6226, 7035
MaeII ACGT 9 cut(s) 1069, 1912, 3127, 4262, 9010, 9081, 10972, 11501, 12181
MbiI CCGCTC 1 cut(s) 7122
MfeI CAATTG 8 cut(s) 5244, 5824, 5985, 9264, 9813, 12271, 12522, 12870
MlsI TGGCCA 9 cut(s) 790, 1593, 3870, 5803, 8343, 8359, 9233, 10202, 13176
MluNI TGGCCA 9 cut(s) 790, 1593, 3870, 5803, 8343, 8359, 9233, 10202, 13176
Mly113I GGCGCC 1 cut(s) 716
MmeI TCCRAC 5 cut(s) 1113, 2738, 7793, 10025, 10508
Mox20I TGGCCA 9 cut(s) 790, 1593, 3870, 5803, 8343, 8359, 9233, 10202, 13176
Mph1103I ATGCAT 6 cut(s) 2481, 6075, 7101, 11429, 11594, 12783
MroNI GCCGGC 1 cut(s) 8041
MroXI GAANNNNTTC 8 cut(s) 847, 912, 4074, 4595, 7556, 10352, 10551, 11670
MscI TGGCCA 9 cut(s) 790, 1593, 3870, 5803, 8343, 8359, 9233, 10202, 13176
MslI CAYNNNNRTG 8 cut(s) 179, 2215, 3980, 4495, 4836, 7658, 8401, 8548
Msp20I TGGCCA 9 cut(s) 790, 1593, 3870, 5803, 8343, 8359, 9233, 10202, 13176
MspA1I CMGCKG 7 cut(s) 2215, 4551, 7235, 9671, 9977, 11162, 13172
MspCI CTTAAG 2 cut(s) 4036, 10955
MunI CAATTG 8 cut(s) 5244, 5824, 5985, 9264, 9813, 12271, 12522, 12870
MvnI CGCG 2 cut(s) 1996, 4390
NaeI GCCGGC 1 cut(s) 8043
NarI GGCGCC 1 cut(s) 716
NciI CCSGG 3 cut(s) 19, 6514, 9860
NcoI CCATGG 8 cut(s) 812, 6412, 7016, 7724, 8114, 8354, 11487, 12349
NdeI CATATG 4 cut(s) 4968, 7900, 10209, 10533
NgoMIV GCCGGC 1 cut(s) 8041
NheI GCTAGC 1 cut(s) 2798
NmeAIII GCCGAG 4 cut(s) 237, 7978, 9234, 13436
NsbI TGCGCA 2 cut(s) 173, 7590
NsiI ATGCAT 6 cut(s) 2481, 6075, 7101, 11429, 11594, 12783
NspV TTCGAA 2 cut(s) 5320, 11335
OliI CACNNNNGTG 1 cut(s) 2215
PaeI GCATGC 2 cut(s) 2806, 8389
PaeR7I CTCGAG 1 cut(s) 5121
PagI TCATGA 3 cut(s) 3424, 6147, 8592
PaqCI CACCTGC 2 cut(s) 8500, 13429
PasI CCCWGGG 2 cut(s) 4635, 9517
PceI AGGCCT 2 cut(s) 1758, 5609
PciI ACATGT 5 cut(s) 1811, 2781, 4831, 12255, 12487
PciSI GCTCTTC 3 cut(s) 801, 10346, 10369
PcsI WCGNNNNNNNCGW 1 cut(s) 11332
PdiI GCCGGC 1 cut(s) 8043
PdmI GAANNNNTTC 8 cut(s) 847, 912, 4074, 4595, 7556, 10352, 10551, 11670
Pfl23II CGTACG 1 cut(s) 7489
PflFI GACNNNGTC 3 cut(s) 3827, 10454, 11860
PflMI CCANNNNNTGG 5 cut(s) 1703, 2873, 4133, 9248, 9517
PfoI TCCNGGA 7 cut(s) 17, 3738, 4132, 5563, 6329, 11302, 12934
PluTI GGCGCC 1 cut(s) 719
PmaCI CACGTG 1 cut(s) 9011
PmlI CACGTG 1 cut(s) 9011
Ppu21I YACGTR 3 cut(s) 1913, 3128, 9011
PpuMI RGGWCCY 3 cut(s) 363, 1468, 12894
PscI ACATGT 5 cut(s) 1811, 2781, 4831, 12255, 12487
PshAI GACNNNNGTC 1 cut(s) 8810
PshBI ATTAAT 2 cut(s) 2474, 8412
PsiI TTATAA 4 cut(s) 1185, 3390, 4511, 10884
Psp1406I AACGTT 1 cut(s) 10972
Psp5II RGGWCCY 3 cut(s) 363, 1468, 12894
PspCI CACGTG 1 cut(s) 9011
PspEI GGTNACC 1 cut(s) 9499
PspFI CCCAGC 1 cut(s) 13463
PspLI CGTACG 1 cut(s) 7489
PspOMI GGGCCC 1 cut(s) 9893
PspPPI RGGWCCY 3 cut(s) 363, 1468, 12894
PspXI VCTCGAGB 1 cut(s) 5121
PstI CTGCAG 8 cut(s) 2076, 5674, 8016, 10009, 12250, 12311, 13404, 13426
PstNI CAGNNNCTG 6 cut(s) 449, 497, 2066, 2080, 5213, 13626
PsyI GACNNNGTC 3 cut(s) 3827, 10454, 11860
PvuII CAGCTG 6 cut(s) 2215, 4551, 7235, 9671, 9977, 13172
RigI GGCCGGCC 1 cut(s) 8045
RseI CAYNNNNRTG 8 cut(s) 179, 2215, 3980, 4495, 4836, 7658, 8401, 8548
SapI GCTCTTC 3 cut(s) 801, 10346, 10369
ScaI AGTACT 5 cut(s) 1403, 2003, 3771, 7741, 9629
SexAI ACCWGGT 3 cut(s) 2869, 6226, 7035
SfoI GGCGCC 1 cut(s) 717
Sfr274I CTCGAG 1 cut(s) 5121
SfuI TTCGAA 2 cut(s) 5320, 11335
SinI GGWCC 8 cut(s) 363, 1468, 2369, 3101, 3671, 7327, 10316, 12894
SlaI CTCGAG 1 cut(s) 5121
SmiMI CAYNNNNRTG 8 cut(s) 179, 2215, 3980, 4495, 4836, 7658, 8401, 8548
SnaBI TACGTA 1 cut(s) 1913
SpeI ACTAGT 2 cut(s) 5839, 12313
SphI GCATGC 2 cut(s) 2806, 8389
SseBI AGGCCT 2 cut(s) 1758, 5609
SspDI GGCGCC 1 cut(s) 715
SspI AATATT 7 cut(s) 820, 1139, 2246, 3217, 5372, 5617, 5808
StuI AGGCCT 2 cut(s) 1758, 5609
TaiI ACGT 9 cut(s) 1072, 1915, 3130, 4265, 9013, 9084, 10975, 11504, 12184
TaqII GACCGA 1 cut(s) 9518
TauI GCSGC 5 cut(s) 62, 6488, 7122, 8270, 13384
TspGWI ACGGA 4 cut(s) 2188, 6287, 7848, 12191
Tth111I GACNNNGTC 3 cut(s) 3827, 10454, 11860
Van91I CCANNNNNTGG 5 cut(s) 1703, 2873, 4133, 9248, 9517
Vha464I CTTAAG 2 cut(s) 4036, 10955
VneI GTGCAC 1 cut(s) 8541
VpaK11BI GGWCC 8 cut(s) 363, 1468, 2369, 3101, 3671, 7327, 10316, 12894
VspI ATTAAT 2 cut(s) 2474, 8412
XagI CCTNNNNNAGG 2 cut(s) 7005, 12136
XbaI TCTAGA 4 cut(s) 700, 1610, 2812, 8477
XcmI CCANNNNNNNNNTGG 3 cut(s) 2721, 7036, 9725
XhoI CTCGAG 1 cut(s) 5121
XmaJI CCTAGG 1 cut(s) 2969
XmiI GTMKAC 4 cut(s) 3933, 5218, 9256, 12723
XmnI GAANNNNTTC 8 cut(s) 847, 912, 4074, 4595, 7556, 10352, 10551, 11670
ZrmI AGTACT 5 cut(s) 1403, 2003, 3771, 7741, 9629
Zsp2I ATGCAT 6 cut(s) 2481, 6075, 7101, 11429, 11594, 12783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.