Prokaryotic RING finger family 4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23110 |
| fragaria_vesca | FvH4_4g36870 FvH4_4g36870 FvH4_4g36870 |
| malus_domestica | MD16G1001800.v1.1 |
| prunus_persica | Prupe.1G347000_v2.0.a1 |
| pyrus_communis | pycom16g00380 |
| rosa_chinensis | RchiOBHm_Chr4g0446631 |
| rosa_laevigata | RLG00000005643 |
| rosa_multiflora | Rmu_sc0001753.1_g000045 |
| rosa_roxburghii | Rroxscaffold_5G00387020 |
| rosa_rugosa | Rorug04G0373500 |
| rosa_samantha | Rh4AG434700 Rh4BG443800 Rh4CG461100 Rh4DG442600 |
| rosa_wichuraiana | Rw4G037170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 1731, 3936, 5057, 11430 |
| AarI | CACCTGC | 2 cut(s) | 9046, 13975 |
| Acc16I | TGCGCA | 2 cut(s) | 719, 8136 |
| AccB1I | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2249, 3419, 4679, 10063 |
| AccBSI | CCGCTC | 1 cut(s) | 7668 |
| AccI | GTMKAC | 4 cut(s) | 4479, 5764, 9802, 13269 |
| AccII | CGCG | 3 cut(s) | 2542, 3437, 4936 |
| AclI | AACGTT | 2 cut(s) | 11518, 12276 |
| AcvI | CACGTG | 1 cut(s) | 9557 |
| AcyI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| AdeI | CACNNNGTG | 1 cut(s) | 3419 |
| AfeI | AGCGCT | 2 cut(s) | 3384, 5459 |
| AflII | CTTAAG | 2 cut(s) | 4582, 11501 |
| AflIII | ACRYGT | 7 cut(s) | 2357, 3327, 3673, 5377, 9556, 12801, 13033 |
| AgeI | ACCGGT | 2 cut(s) | 332, 13831 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2020, 7498 |
| AhlI | ACTAGT | 2 cut(s) | 6385, 12859 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 1413, 1445, 8678, 8710, 8955, 8987, 10578, 10610 |
| AleI | CACNNNNGTG | 1 cut(s) | 2761 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2765, 2797 |
| Alw44I | GTGCAC | 1 cut(s) | 9087 |
| AlwNI | CAGNNNCTG | 7 cut(s) | 995, 1043, 2612, 2626, 5759, 14041, 14172 |
| Ama87I | CYCGRG | 4 cut(s) | 95, 461, 7594, 9384 |
| Aor51HI | AGCGCT | 2 cut(s) | 3384, 5459 |
| ApaI | GGGCCC | 1 cut(s) | 10443 |
| ApaLI | GTGCAC | 1 cut(s) | 9087 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 5408, 5440, 5702, 5734, 14080, 14112 |
| AseI | ATTAAT | 2 cut(s) | 3020, 8958 |
| AsiGI | ACCGGT | 2 cut(s) | 332, 13831 |
| Asp700I | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216 |
| AspA2I | CCTAGG | 1 cut(s) | 3515 |
| AspLEI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4936, 5460, 8137 |
| AsuC2I | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7060, 10406 |
| AsuII | TTCGAA | 2 cut(s) | 5866, 11881 |
| AsuNHI | GCTAGC | 1 cut(s) | 3344 |
| AvaI | CYCGRG | 4 cut(s) | 95, 461, 7594, 9384 |
| AvaII | GGWCC | 9 cut(s) | 909, 2014, 2915, 3647, 4217, 7873, 10862, 12004, 13440 |
| AvrII | CCTAGG | 1 cut(s) | 3515 |
| AxyI | CCTNAGG | 3 cut(s) | 1625, 2712, 6470 |
| BaeGI | GKGCMC | 4 cut(s) | 3236, 5819, 9091, 10443 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2626, 2659, 11694, 11727 |
| BalI | TGGCCA | 9 cut(s) | 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722 |
| BamHI | GGATCC | 5 cut(s) | 3791, 7702, 12302, 12899, 13319 |
| BanI | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| BanII | GRGCYC | 5 cut(s) | 5602, 6253, 10443, 10802, 12323 |
| BarI | GAAGNNNNNNTAC | 8 cut(s) | 1446, 1478, 3846, 3878, 6119, 6151, 8343, 8375 |
| BauI | CACGAG | 4 cut(s) | 3150, 5667, 6045, 13025 |
| BbrPI | CACGTG | 1 cut(s) | 9557 |
| BbsI | GAAGAC | 9 cut(s) | 42, 335, 932, 3399, 4369, 5360, 10996, 12387, 13783 |
| BciVI | GTATCC | 4 cut(s) | 1145, 3093, 10872, 11695 |
| BclI | TGATCA | 7 cut(s) | 1468, 3121, 3478, 4627, 8863, 11460, 11590 |
| BcnI | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7060, 10406 |
| BcuI | ACTAGT | 2 cut(s) | 6385, 12859 |
| BfoI | RGCGCY | 5 cut(s) | 150, 221, 1265, 3386, 5461 |
| BfrI | CTTAAG | 2 cut(s) | 4582, 11501 |
| BfuI | GTATCC | 4 cut(s) | 1145, 3093, 10872, 11695 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 7060 |
| BglII | AGATCT | 6 cut(s) | 2527, 4390, 5317, 10918, 11767, 12952 |
| BlnI | CCTAGG | 1 cut(s) | 3515 |
| BlpI | GCTNAGC | 1 cut(s) | 8705 |
| BmcAI | AGTACT | 5 cut(s) | 1949, 2549, 4317, 8287, 10175 |
| Bme18I | GGWCC | 9 cut(s) | 909, 2014, 2915, 3647, 4217, 7873, 10862, 12004, 13440 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2020, 7498 |
| BmeT110I | CYCGRG | 4 cut(s) | 95, 461, 7594, 9384 |
| BmrI | ACTGGG | 8 cut(s) | 3230, 4472, 5141, 6493, 10013, 10285, 10789, 13766 |
| BmtI | GCTAGC | 1 cut(s) | 3348 |
| BmuI | ACTGGG | 8 cut(s) | 3230, 4472, 5141, 6493, 10013, 10285, 10789, 13766 |
| BoxI | GACNNNNGTC | 1 cut(s) | 42 |
| BpiI | GAAGAC | 9 cut(s) | 42, 335, 932, 3399, 4369, 5360, 10996, 12387, 13783 |
| Bpu10I | CCTNAGC | 4 cut(s) | 7749, 12224, 12314, 13287 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 8705 |
| Bpu14I | TTCGAA | 2 cut(s) | 5866, 11881 |
| BpuEI | CTTGAG | 9 cut(s) | 3215, 3602, 5342, 6053, 8501, 8641, 8987, 10190, 14197 |
| BpuMI | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7060, 10406 |
| Bsa29I | ATCGAT | 2 cut(s) | 9271, 10514 |
| BsaAI | YACGTR | 3 cut(s) | 2459, 3674, 9557 |
| BsaBI | GATNNNNATC | 5 cut(s) | 1774, 4965, 9393, 11603, 13599 |
| BsaHI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| BsaI | GGTCTC | 7 cut(s) | 504, 3229, 5249, 7178, 7600, 13618, 13665 |
| BsaWI | WCCGGW | 6 cut(s) | 16, 332, 576, 4692, 13350, 13831 |
| Bse118I | RCCGGY | 5 cut(s) | 143, 332, 3591, 8587, 13831 |
| Bse21I | CCTNAGG | 3 cut(s) | 1625, 2712, 6470 |
| Bse8I | GATNNNNATC | 5 cut(s) | 1774, 4965, 9393, 11603, 13599 |
| BseCI | ATCGAT | 2 cut(s) | 9271, 10514 |
| BseJI | GATNNNNATC | 5 cut(s) | 1774, 4965, 9393, 11603, 13599 |
| BseRI | GAGGAG | 6 cut(s) | 284, 3288, 3789, 6129, 8720, 13244 |
| BseSI | GKGCMC | 4 cut(s) | 3236, 5819, 9091, 10443 |
| BseX3I | CGGCCG | 1 cut(s) | 13709 |
| BseYI | CCCAGC | 1 cut(s) | 14009 |
| BsgI | GTGCAG | 8 cut(s) | 1654, 3790, 5630, 6536, 6986, 7788, 8775, 9714 |
| Bsh1236I | CGCG | 3 cut(s) | 2542, 3437, 4936 |
| Bsh1285I | CGRYCG | 2 cut(s) | 337, 13712 |
| BshNI | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| BshTI | ACCGGT | 2 cut(s) | 332, 13831 |
| BshVI | ATCGAT | 2 cut(s) | 9271, 10514 |
| BsiEI | CGRYCG | 2 cut(s) | 337, 13712 |
| BsiHKCI | CYCGRG | 4 cut(s) | 95, 461, 7594, 9384 |
| BsiWI | CGTACG | 1 cut(s) | 8035 |
| BsmBI | CGTCTC | 3 cut(s) | 167, 2978, 4799 |
| Bso31I | GGTCTC | 7 cut(s) | 504, 3229, 5249, 7178, 7600, 13618, 13665 |
| BsoBI | CYCGRG | 4 cut(s) | 95, 461, 7594, 9384 |
| Bsp119I | TTCGAA | 2 cut(s) | 5866, 11881 |
| Bsp120I | GGGCCC | 1 cut(s) | 10439 |
| Bsp1407I | TGTACA | 4 cut(s) | 946, 1138, 7395, 8308 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 8705 |
| Bsp19I | CCATGG | 7 cut(s) | 1358, 6958, 7562, 8270, 8660, 8900, 12895 |
| BspDI | ATCGAT | 2 cut(s) | 9271, 10514 |
| BspFNI | CGCG | 3 cut(s) | 2542, 3437, 4936 |
| BspHI | TCATGA | 3 cut(s) | 3970, 6693, 9138 |
| BspMAI | CTGCAG | 9 cut(s) | 2622, 6220, 8562, 8815, 10555, 12796, 12857, 13950, 13972 |
| BspOI | GCTAGC | 1 cut(s) | 3348 |
| BspQI | GCTCTTC | 4 cut(s) | 1347, 10892, 10915, 14242 |
| BspT104I | TTCGAA | 2 cut(s) | 5866, 11881 |
| BspT107I | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| BspTI | CTTAAG | 2 cut(s) | 4582, 11501 |
| BspTNI | GGTCTC | 7 cut(s) | 504, 3229, 5249, 7178, 7600, 13618, 13665 |
| BsrBI | CCGCTC | 1 cut(s) | 7668 |
| BsrFI | RCCGGY | 5 cut(s) | 143, 332, 3591, 8587, 13831 |
| BsrGI | TGTACA | 4 cut(s) | 946, 1138, 7395, 8308 |
| BssAI | RCCGGY | 5 cut(s) | 143, 332, 3591, 8587, 13831 |
| BssNAI | GTATAC | 1 cut(s) | 9803 |
| BssNI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| BssSI | CACGAG | 4 cut(s) | 3150, 5667, 6045, 13025 |
| Bst1107I | GTATAC | 1 cut(s) | 9803 |
| Bst2BI | CACGAG | 4 cut(s) | 3150, 5667, 6045, 13025 |
| BstACI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| BstAFI | CTTAAG | 2 cut(s) | 4582, 11501 |
| BstAUI | TGTACA | 4 cut(s) | 946, 1138, 7395, 8308 |
| BstBAI | YACGTR | 3 cut(s) | 2459, 3674, 9557 |
| BstBI | TTCGAA | 2 cut(s) | 5866, 11881 |
| BstEII | GGTNACC | 1 cut(s) | 10045 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 440, 12682 |
| BstFNI | CGCG | 3 cut(s) | 2542, 3437, 4936 |
| BstH2I | RGCGCY | 5 cut(s) | 150, 221, 1265, 3386, 5461 |
| BstHHI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4936, 5460, 8137 |
| BstMCI | CGRYCG | 2 cut(s) | 337, 13712 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 42 |
| BstPI | GGTNACC | 1 cut(s) | 10045 |
| BstSLI | GKGCMC | 4 cut(s) | 3236, 5819, 9091, 10443 |
| BstSNI | TACGTA | 1 cut(s) | 2459 |
| BstUI | CGCG | 3 cut(s) | 2542, 3437, 4936 |
| BstV2I | GAAGAC | 9 cut(s) | 42, 335, 932, 3399, 4369, 5360, 10996, 12387, 13783 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 2930, 3658, 10271, 11950, 11989 |
| BstZ17I | GTATAC | 1 cut(s) | 9803 |
| BstZI | CGGCCG | 1 cut(s) | 13709 |
| Bsu15I | ATCGAT | 2 cut(s) | 9271, 10514 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1625, 2712, 6470 |
| BsuI | GTATCC | 4 cut(s) | 1145, 3093, 10872, 11695 |
| BsuTUI | ATCGAT | 2 cut(s) | 9271, 10514 |
| BtgZI | GCGATG | 1 cut(s) | 13826 |
| BtsI | GCAGTG | 5 cut(s) | 828, 1819, 5348, 7080, 11167 |
| CaiI | CAGNNNCTG | 7 cut(s) | 995, 1043, 2612, 2626, 5759, 14041, 14172 |
| CciI | TCATGA | 3 cut(s) | 3970, 6693, 9138 |
| CfoI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4936, 5460, 8137 |
| Cfr10I | RCCGGY | 5 cut(s) | 143, 332, 3591, 8587, 13831 |
| Cfr9I | CCCGGG | 1 cut(s) | 461 |
| ClaI | ATCGAT | 2 cut(s) | 9271, 10514 |
| CseI | GACGC | 3 cut(s) | 263, 749, 3815 |
| CsiI | ACCWGGT | 3 cut(s) | 3415, 6772, 7581 |
| CspAI | ACCGGT | 2 cut(s) | 332, 13831 |
| DinI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| DraI | TTTAAA | 2 cut(s) | 11724, 12642 |
| DraIII | CACNNNGTG | 1 cut(s) | 3419 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2020, 7498 |
| EagI | CGGCCG | 1 cut(s) | 13709 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2020, 7498 |
| EclXI | CGGCCG | 1 cut(s) | 13709 |
| Eco105I | TACGTA | 1 cut(s) | 2459 |
| Eco147I | AGGCCT | 3 cut(s) | 323, 2304, 6155 |
| Eco24I | GRGCYC | 5 cut(s) | 5602, 6253, 10443, 10802, 12323 |
| Eco31I | GGTCTC | 7 cut(s) | 504, 3229, 5249, 7178, 7600, 13618, 13665 |
| Eco32I | GATATC | 3 cut(s) | 5239, 7786, 12722 |
| Eco47I | GGWCC | 9 cut(s) | 909, 2014, 2915, 3647, 4217, 7873, 10862, 12004, 13440 |
| Eco47III | AGCGCT | 2 cut(s) | 3384, 5459 |
| Eco52I | CGGCCG | 1 cut(s) | 13709 |
| Eco72I | CACGTG | 1 cut(s) | 9557 |
| Eco81I | CCTNAGG | 3 cut(s) | 1625, 2712, 6470 |
| Eco88I | CYCGRG | 4 cut(s) | 95, 461, 7594, 9384 |
| Eco91I | GGTNACC | 1 cut(s) | 10045 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 440, 12682 |
| EcoO65I | GGTNACC | 1 cut(s) | 10045 |
| EcoRI | GAATTC | 8 cut(s) | 3734, 4224, 6884, 7348, 7818, 8006, 10600, 12472 |
| EcoRV | GATATC | 3 cut(s) | 5239, 7786, 12722 |
| EcoT22I | ATGCAT | 7 cut(s) | 3027, 6621, 7647, 10506, 11975, 12140, 13329 |
| EcoT38I | GRGCYC | 5 cut(s) | 5602, 6253, 10443, 10802, 12323 |
| EgeI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| EheI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| Esp3I | CGTCTC | 3 cut(s) | 167, 2978, 4799 |
| FauI | CCCGC | 1 cut(s) | 12578 |
| FauNDI | CATATG | 4 cut(s) | 5514, 8446, 10755, 11079 |
| FbaI | TGATCA | 7 cut(s) | 1468, 3121, 3478, 4627, 8863, 11460, 11590 |
| FblI | GTMKAC | 4 cut(s) | 4479, 5764, 9802, 13269 |
| FriOI | GRGCYC | 5 cut(s) | 5602, 6253, 10443, 10802, 12323 |
| FseI | GGCCGGCC | 1 cut(s) | 8591 |
| FspI | TGCGCA | 2 cut(s) | 719, 8136 |
| GlaI | GCGC | 9 cut(s) | 148, 219, 719, 1263, 3384, 3438, 4935, 5459, 8136 |
| GsaI | CCCAGC | 1 cut(s) | 14013 |
| HaeII | RGCGCY | 5 cut(s) | 150, 221, 1265, 3386, 5461 |
| HgaI | GACGC | 3 cut(s) | 263, 749, 3815 |
| HhaI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4936, 5460, 8137 |
| Hin1I | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| Hin6I | GCGC | 9 cut(s) | 147, 218, 718, 1262, 3383, 3437, 4934, 5458, 8135 |
| HinP1I | GCGC | 9 cut(s) | 147, 218, 718, 1262, 3383, 3437, 4934, 5458, 8135 |
| HincII | GTYRAC | 6 cut(s) | 55, 4894, 6269, 7344, 8115, 14191 |
| HindII | GTYRAC | 6 cut(s) | 55, 4894, 6269, 7344, 8115, 14191 |
| Hpy99I | CGWCG | 5 cut(s) | 158, 257, 388, 1179, 3809 |
| HpyCH4IV | ACGT | 8 cut(s) | 1615, 2458, 3673, 4808, 9556, 11518, 12276, 12727 |
| HpySE526I | ACGT | 8 cut(s) | 1615, 2458, 3673, 4808, 9556, 11518, 12276, 12727 |
| Hsp92I | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| HspAI | GCGC | 9 cut(s) | 147, 218, 718, 1262, 3383, 3437, 4934, 5458, 8135 |
| KasI | GGCGCC | 3 cut(s) | 146, 217, 1261 |
| KflI | GGGWCCC | 3 cut(s) | 909, 2014, 13440 |
| KroI | GCCGGC | 2 cut(s) | 143, 8587 |
| KroNI | GCCGGC | 2 cut(s) | 145, 8589 |
| Ksp22I | TGATCA | 7 cut(s) | 1468, 3121, 3478, 4627, 8863, 11460, 11590 |
| LguI | GCTCTTC | 4 cut(s) | 1347, 10892, 10915, 14242 |
| MabI | ACCWGGT | 3 cut(s) | 3415, 6772, 7581 |
| MaeII | ACGT | 8 cut(s) | 1615, 2458, 3673, 4808, 9556, 11518, 12276, 12727 |
| MbiI | CCGCTC | 1 cut(s) | 7668 |
| MfeI | CAATTG | 8 cut(s) | 5790, 6370, 6531, 9810, 10359, 11456, 12817, 13416 |
| MlsI | TGGCCA | 9 cut(s) | 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722 |
| MluNI | TGGCCA | 9 cut(s) | 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722 |
| Mly113I | GGCGCC | 3 cut(s) | 147, 218, 1262 |
| MmeI | TCCRAC | 8 cut(s) | 216, 328, 1411, 1659, 3284, 8339, 10571, 11054 |
| Mox20I | TGGCCA | 9 cut(s) | 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722 |
| Mph1103I | ATGCAT | 7 cut(s) | 3027, 6621, 7647, 10506, 11975, 12140, 13329 |
| MroNI | GCCGGC | 2 cut(s) | 143, 8587 |
| MroXI | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216 |
| MscI | TGGCCA | 9 cut(s) | 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722 |
| MslI | CAYNNNNRTG | 8 cut(s) | 725, 2761, 4526, 5041, 5382, 8204, 8947, 9094 |
| Msp20I | TGGCCA | 9 cut(s) | 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722 |
| MspA1I | CMGCKG | 6 cut(s) | 2761, 5097, 7781, 10523, 11708, 13718 |
| MspCI | CTTAAG | 2 cut(s) | 4582, 11501 |
| MunI | CAATTG | 8 cut(s) | 5790, 6370, 6531, 9810, 10359, 11456, 12817, 13416 |
| MvnI | CGCG | 3 cut(s) | 2542, 3437, 4936 |
| NaeI | GCCGGC | 2 cut(s) | 145, 8589 |
| NarI | GGCGCC | 3 cut(s) | 147, 218, 1262 |
| NciI | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7060, 10406 |
| NcoI | CCATGG | 7 cut(s) | 1358, 6958, 7562, 8270, 8660, 8900, 12895 |
| NdeI | CATATG | 4 cut(s) | 5514, 8446, 10755, 11079 |
| NgoMIV | GCCGGC | 2 cut(s) | 143, 8587 |
| NheI | GCTAGC | 1 cut(s) | 3344 |
| NmeAIII | GCCGAG | 4 cut(s) | 783, 8524, 9780, 13982 |
| NsbI | TGCGCA | 2 cut(s) | 719, 8136 |
| NsiI | ATGCAT | 7 cut(s) | 3027, 6621, 7647, 10506, 11975, 12140, 13329 |
| NspV | TTCGAA | 2 cut(s) | 5866, 11881 |
| OliI | CACNNNNGTG | 1 cut(s) | 2761 |
| PaeI | GCATGC | 2 cut(s) | 3352, 8935 |
| PagI | TCATGA | 3 cut(s) | 3970, 6693, 9138 |
| PaqCI | CACCTGC | 2 cut(s) | 9046, 13975 |
| PasI | CCCWGGG | 2 cut(s) | 5181, 10063 |
| PceI | AGGCCT | 3 cut(s) | 323, 2304, 6155 |
| PciI | ACATGT | 5 cut(s) | 2357, 3327, 5377, 12801, 13033 |
| PciSI | GCTCTTC | 4 cut(s) | 1347, 10892, 10915, 14242 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 11878 |
| PdiI | GCCGGC | 2 cut(s) | 145, 8589 |
| PdmI | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216 |
| Pfl23II | CGTACG | 1 cut(s) | 8035 |
| PflFI | GACNNNGTC | 3 cut(s) | 4373, 11000, 12406 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2249, 3419, 4679, 10063 |
| PfoI | TCCNGGA | 8 cut(s) | 72, 563, 4284, 4678, 6109, 6875, 11848, 13480 |
| PinAI | ACCGGT | 2 cut(s) | 332, 13831 |
| PluTI | GGCGCC | 3 cut(s) | 150, 221, 1265 |
| PmaCI | CACGTG | 1 cut(s) | 9557 |
| PmlI | CACGTG | 1 cut(s) | 9557 |
| Ppu21I | YACGTR | 3 cut(s) | 2459, 3674, 9557 |
| PpuMI | RGGWCCY | 4 cut(s) | 909, 2014, 12004, 13440 |
| PscI | ACATGT | 5 cut(s) | 2357, 3327, 5377, 12801, 13033 |
| PshAI | GACNNNNGTC | 1 cut(s) | 42 |
| PshBI | ATTAAT | 2 cut(s) | 3020, 8958 |
| PsiI | TTATAA | 4 cut(s) | 1731, 3936, 5057, 11430 |
| Psp1406I | AACGTT | 2 cut(s) | 11518, 12276 |
| Psp5II | RGGWCCY | 4 cut(s) | 909, 2014, 12004, 13440 |
| PspCI | CACGTG | 1 cut(s) | 9557 |
| PspEI | GGTNACC | 1 cut(s) | 10045 |
| PspFI | CCCAGC | 1 cut(s) | 14009 |
| PspLI | CGTACG | 1 cut(s) | 8035 |
| PspOMI | GGGCCC | 1 cut(s) | 10439 |
| PspPPI | RGGWCCY | 4 cut(s) | 909, 2014, 12004, 13440 |
| PstI | CTGCAG | 9 cut(s) | 2622, 6220, 8562, 8815, 10555, 12796, 12857, 13950, 13972 |
| PstNI | CAGNNNCTG | 7 cut(s) | 995, 1043, 2612, 2626, 5759, 14041, 14172 |
| PsyI | GACNNNGTC | 3 cut(s) | 4373, 11000, 12406 |
| PvuII | CAGCTG | 5 cut(s) | 2761, 5097, 7781, 10523, 13718 |
| RigI | GGCCGGCC | 1 cut(s) | 8591 |
| RseI | CAYNNNNRTG | 8 cut(s) | 725, 2761, 4526, 5041, 5382, 8204, 8947, 9094 |
| SapI | GCTCTTC | 4 cut(s) | 1347, 10892, 10915, 14242 |
| ScaI | AGTACT | 5 cut(s) | 1949, 2549, 4317, 8287, 10175 |
| SexAI | ACCWGGT | 3 cut(s) | 3415, 6772, 7581 |
| SfoI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| SfuI | TTCGAA | 2 cut(s) | 5866, 11881 |
| SinI | GGWCC | 9 cut(s) | 909, 2014, 2915, 3647, 4217, 7873, 10862, 12004, 13440 |
| SmaI | CCCGGG | 1 cut(s) | 463 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 725, 2761, 4526, 5041, 5382, 8204, 8947, 9094 |
| SnaBI | TACGTA | 1 cut(s) | 2459 |
| SpeI | ACTAGT | 2 cut(s) | 6385, 12859 |
| SphI | GCATGC | 2 cut(s) | 3352, 8935 |
| SseBI | AGGCCT | 3 cut(s) | 323, 2304, 6155 |
| SspDI | GGCGCC | 3 cut(s) | 146, 217, 1261 |
| SspI | AATATT | 8 cut(s) | 635, 1366, 1685, 2792, 3763, 5918, 6163, 6354 |
| StuI | AGGCCT | 3 cut(s) | 323, 2304, 6155 |
| TaiI | ACGT | 8 cut(s) | 1618, 2461, 3676, 4811, 9559, 11521, 12279, 12730 |
| TaqII | GACCGA | 2 cut(s) | 32, 10064 |
| TauI | GCSGC | 6 cut(s) | 180, 608, 3437, 7034, 7668, 13930 |
| TspGWI | ACGGA | 4 cut(s) | 2734, 6833, 8394, 12737 |
| TspMI | CCCGGG | 1 cut(s) | 461 |
| Tth111I | GACNNNGTC | 3 cut(s) | 4373, 11000, 12406 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2249, 3419, 4679, 10063 |
| Vha464I | CTTAAG | 2 cut(s) | 4582, 11501 |
| VneI | GTGCAC | 1 cut(s) | 9087 |
| VpaK11BI | GGWCC | 9 cut(s) | 909, 2014, 2915, 3647, 4217, 7873, 10862, 12004, 13440 |
| VspI | ATTAAT | 2 cut(s) | 3020, 8958 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 440, 12682 |
| XbaI | TCTAGA | 4 cut(s) | 31, 1246, 2156, 9023 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3267, 7582, 10271 |
| XmaI | CCCGGG | 1 cut(s) | 461 |
| XmaJI | CCTAGG | 1 cut(s) | 3515 |
| XmiI | GTMKAC | 4 cut(s) | 4479, 5764, 9802, 13269 |
| XmnI | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216 |
| ZrmI | AGTACT | 5 cut(s) | 1949, 2549, 4317, 8287, 10175 |
| Zsp2I | ATGCAT | 7 cut(s) | 3027, 6621, 7647, 10506, 11975, 12140, 13329 |