Prokaryotic RING finger family 4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23110 |
| fragaria_vesca | FvH4_4g36870 FvH4_4g36870 FvH4_4g36870 |
| malus_domestica | MD16G1001800.v1.1 |
| prunus_persica | Prupe.1G347000_v2.0.a1 |
| pyrus_communis | pycom16g00380 |
| rosa_chinensis | RchiOBHm_Chr4g0446631 |
| rosa_laevigata | RLG00000005643 |
| rosa_multiflora | Rmu_sc0001753.1_g000045 |
| rosa_roxburghii | Rroxscaffold_5G00387020 |
| rosa_rugosa | Rorug04G0373500 |
| rosa_samantha | Rh4AG434700 Rh4BG443800 Rh4CG461100 Rh4DG442600 |
| rosa_wichuraiana | Rw4G037170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 1731, 3936, 5018, 5115, 11391 |
| AarI | CACCTGC | 3 cut(s) | 782, 9007, 13936 |
| Acc16I | TGCGCA | 2 cut(s) | 719, 8097 |
| AccB1I | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2249, 3419, 4640, 10024 |
| AccBSI | CCGCTC | 1 cut(s) | 7629 |
| AccI | GTMKAC | 4 cut(s) | 4440, 5725, 9763, 13230 |
| AccII | CGCG | 3 cut(s) | 2542, 3437, 4897 |
| AclI | AACGTT | 2 cut(s) | 11479, 12237 |
| AcvI | CACGTG | 1 cut(s) | 9518 |
| AcyI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| AdeI | CACNNNGTG | 2 cut(s) | 3419, 7772 |
| AfeI | AGCGCT | 2 cut(s) | 3384, 5420 |
| AflII | CTTAAG | 2 cut(s) | 4543, 11462 |
| AflIII | ACRYGT | 7 cut(s) | 2357, 3327, 3673, 5338, 9517, 12762, 12994 |
| AgeI | ACCGGT | 2 cut(s) | 332, 13792 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2020, 7459 |
| AhlI | ACTAGT | 2 cut(s) | 6346, 12820 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 1413, 1445, 8639, 8671, 8916, 8948, 10539, 10571 |
| AleI | CACNNNNGTG | 1 cut(s) | 2761 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2765, 2797 |
| Alw44I | GTGCAC | 1 cut(s) | 9048 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 995, 1043, 2612, 2626, 5720, 14133 |
| Ama87I | CYCGRG | 4 cut(s) | 95, 461, 7555, 9345 |
| Aor51HI | AGCGCT | 2 cut(s) | 3384, 5420 |
| ApaI | GGGCCC | 1 cut(s) | 10404 |
| ApaLI | GTGCAC | 1 cut(s) | 9048 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 5369, 5401, 5663, 5695, 14041, 14073 |
| AseI | ATTAAT | 2 cut(s) | 3020, 8919 |
| AsiGI | ACCGGT | 2 cut(s) | 332, 13792 |
| Asp700I | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4581, 5102, 8063, 10859, 11058, 12177 |
| AspA2I | CCTAGG | 1 cut(s) | 3515 |
| AspLEI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4897, 5421, 8098 |
| AsuC2I | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7021, 10367 |
| AsuII | TTCGAA | 2 cut(s) | 5827, 11842 |
| AsuNHI | GCTAGC | 1 cut(s) | 3344 |
| AvaI | CYCGRG | 4 cut(s) | 95, 461, 7555, 9345 |
| AvaII | GGWCC | 7 cut(s) | 909, 2014, 2915, 3647, 4217, 7834, 10823 |
| AvrII | CCTAGG | 1 cut(s) | 3515 |
| AxyI | CCTNAGG | 3 cut(s) | 1625, 2712, 6431 |
| BaeGI | GKGCMC | 4 cut(s) | 3236, 5780, 9052, 10404 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2626, 2659, 11655, 11688 |
| BalI | TGGCCA | 9 cut(s) | 1336, 2139, 4377, 6310, 8850, 8866, 9740, 10709, 13683 |
| BamHI | GGATCC | 5 cut(s) | 3791, 7663, 12263, 12860, 13280 |
| BanI | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| BanII | GRGCYC | 5 cut(s) | 5563, 6214, 10404, 10763, 12284 |
| BarI | GAAGNNNNNNTAC | 8 cut(s) | 1446, 1478, 3846, 3878, 6080, 6112, 8304, 8336 |
| BauI | CACGAG | 4 cut(s) | 3150, 5628, 6006, 12986 |
| BbrPI | CACGTG | 1 cut(s) | 9518 |
| BciVI | GTATCC | 4 cut(s) | 1145, 3093, 10833, 11656 |
| BclI | TGATCA | 7 cut(s) | 1468, 3121, 3478, 4588, 8824, 11421, 11551 |
| BcnI | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7021, 10367 |
| BcuI | ACTAGT | 2 cut(s) | 6346, 12820 |
| BfoI | RGCGCY | 5 cut(s) | 150, 221, 1265, 3386, 5422 |
| BfrI | CTTAAG | 2 cut(s) | 4543, 11462 |
| BfuI | GTATCC | 4 cut(s) | 1145, 3093, 10833, 11656 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 7021 |
| BglII | AGATCT | 5 cut(s) | 2527, 5278, 10879, 11728, 12913 |
| BlnI | CCTAGG | 1 cut(s) | 3515 |
| BlpI | GCTNAGC | 1 cut(s) | 8666 |
| BmcAI | AGTACT | 4 cut(s) | 1949, 2549, 4317, 10136 |
| Bme18I | GGWCC | 7 cut(s) | 909, 2014, 2915, 3647, 4217, 7834, 10823 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2020, 7459 |
| BmeT110I | CYCGRG | 4 cut(s) | 95, 461, 7555, 9345 |
| BmrI | ACTGGG | 8 cut(s) | 3230, 4433, 5102, 6454, 9974, 10246, 10750, 13727 |
| BmtI | GCTAGC | 1 cut(s) | 3348 |
| BmuI | ACTGGG | 8 cut(s) | 3230, 4433, 5102, 6454, 9974, 10246, 10750, 13727 |
| BoxI | GACNNNNGTC | 2 cut(s) | 42, 9317 |
| Bpu10I | CCTNAGC | 4 cut(s) | 7710, 12185, 12275, 13248 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 8666 |
| Bpu14I | TTCGAA | 2 cut(s) | 5827, 11842 |
| BpuEI | CTTGAG | 9 cut(s) | 3215, 3602, 5303, 6014, 8462, 8602, 8948, 10151, 14158 |
| BpuMI | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7021, 10367 |
| Bsa29I | ATCGAT | 2 cut(s) | 9232, 10475 |
| BsaAI | YACGTR | 3 cut(s) | 2459, 3674, 9518 |
| BsaBI | GATNNNNATC | 5 cut(s) | 1774, 4926, 9354, 11564, 13560 |
| BsaHI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| BsaI | GGTCTC | 7 cut(s) | 504, 3229, 5210, 7139, 7561, 13579, 13626 |
| BsaWI | WCCGGW | 6 cut(s) | 16, 332, 576, 4653, 13311, 13792 |
| Bse118I | RCCGGY | 5 cut(s) | 143, 332, 3591, 8548, 13792 |
| Bse21I | CCTNAGG | 3 cut(s) | 1625, 2712, 6431 |
| Bse8I | GATNNNNATC | 5 cut(s) | 1774, 4926, 9354, 11564, 13560 |
| BseCI | ATCGAT | 2 cut(s) | 9232, 10475 |
| BseJI | GATNNNNATC | 5 cut(s) | 1774, 4926, 9354, 11564, 13560 |
| BseRI | GAGGAG | 6 cut(s) | 284, 3288, 3789, 6090, 8681, 13205 |
| BseSI | GKGCMC | 4 cut(s) | 3236, 5780, 9052, 10404 |
| BseX3I | CGGCCG | 1 cut(s) | 13670 |
| BseYI | CCCAGC | 1 cut(s) | 13970 |
| BsgI | GTGCAG | 8 cut(s) | 1654, 3790, 5591, 6497, 6947, 7749, 8736, 9675 |
| Bsh1236I | CGCG | 3 cut(s) | 2542, 3437, 4897 |
| Bsh1285I | CGRYCG | 2 cut(s) | 337, 13673 |
| BshNI | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| BshTI | ACCGGT | 2 cut(s) | 332, 13792 |
| BshVI | ATCGAT | 2 cut(s) | 9232, 10475 |
| BsiEI | CGRYCG | 2 cut(s) | 337, 13673 |
| BsiHKCI | CYCGRG | 4 cut(s) | 95, 461, 7555, 9345 |
| BsiWI | CGTACG | 1 cut(s) | 7996 |
| BsmBI | CGTCTC | 3 cut(s) | 167, 2978, 4760 |
| Bso31I | GGTCTC | 7 cut(s) | 504, 3229, 5210, 7139, 7561, 13579, 13626 |
| BsoBI | CYCGRG | 4 cut(s) | 95, 461, 7555, 9345 |
| Bsp119I | TTCGAA | 2 cut(s) | 5827, 11842 |
| Bsp120I | GGGCCC | 1 cut(s) | 10400 |
| Bsp1407I | TGTACA | 4 cut(s) | 946, 1138, 7356, 8269 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 8666 |
| Bsp19I | CCATGG | 7 cut(s) | 1358, 6919, 7523, 8231, 8621, 8861, 12856 |
| BspDI | ATCGAT | 2 cut(s) | 9232, 10475 |
| BspFNI | CGCG | 3 cut(s) | 2542, 3437, 4897 |
| BspHI | TCATGA | 3 cut(s) | 3970, 6654, 9099 |
| BspOI | GCTAGC | 1 cut(s) | 3348 |
| BspQI | GCTCTTC | 4 cut(s) | 1347, 10853, 10876, 14203 |
| BspT104I | TTCGAA | 2 cut(s) | 5827, 11842 |
| BspT107I | GGYRCC | 6 cut(s) | 146, 217, 1261, 1444, 2345, 3231 |
| BspTI | CTTAAG | 2 cut(s) | 4543, 11462 |
| BspTNI | GGTCTC | 7 cut(s) | 504, 3229, 5210, 7139, 7561, 13579, 13626 |
| BsrBI | CCGCTC | 1 cut(s) | 7629 |
| BsrFI | RCCGGY | 5 cut(s) | 143, 332, 3591, 8548, 13792 |
| BsrGI | TGTACA | 4 cut(s) | 946, 1138, 7356, 8269 |
| BssAI | RCCGGY | 5 cut(s) | 143, 332, 3591, 8548, 13792 |
| BssNAI | GTATAC | 1 cut(s) | 9764 |
| BssNI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| BssSI | CACGAG | 4 cut(s) | 3150, 5628, 6006, 12986 |
| Bst1107I | GTATAC | 1 cut(s) | 9764 |
| Bst2BI | CACGAG | 4 cut(s) | 3150, 5628, 6006, 12986 |
| BstACI | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| BstAFI | CTTAAG | 2 cut(s) | 4543, 11462 |
| BstAUI | TGTACA | 4 cut(s) | 946, 1138, 7356, 8269 |
| BstBAI | YACGTR | 3 cut(s) | 2459, 3674, 9518 |
| BstBI | TTCGAA | 2 cut(s) | 5827, 11842 |
| BstEII | GGTNACC | 2 cut(s) | 10006, 13401 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 440, 12643 |
| BstFNI | CGCG | 3 cut(s) | 2542, 3437, 4897 |
| BstH2I | RGCGCY | 5 cut(s) | 150, 221, 1265, 3386, 5422 |
| BstHHI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4897, 5421, 8098 |
| BstMCI | CGRYCG | 2 cut(s) | 337, 13673 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 42, 9317 |
| BstPI | GGTNACC | 2 cut(s) | 10006, 13401 |
| BstSLI | GKGCMC | 4 cut(s) | 3236, 5780, 9052, 10404 |
| BstSNI | TACGTA | 1 cut(s) | 2459 |
| BstUI | CGCG | 3 cut(s) | 2542, 3437, 4897 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 2930, 3658, 10232, 11911, 11950 |
| BstZ17I | GTATAC | 1 cut(s) | 9764 |
| BstZI | CGGCCG | 1 cut(s) | 13670 |
| Bsu15I | ATCGAT | 2 cut(s) | 9232, 10475 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1625, 2712, 6431 |
| BsuI | GTATCC | 4 cut(s) | 1145, 3093, 10833, 11656 |
| BsuTUI | ATCGAT | 2 cut(s) | 9232, 10475 |
| BtgZI | GCGATG | 1 cut(s) | 13787 |
| BtsI | GCAGTG | 5 cut(s) | 828, 1819, 5309, 7041, 11128 |
| CaiI | CAGNNNCTG | 6 cut(s) | 995, 1043, 2612, 2626, 5720, 14133 |
| CciI | TCATGA | 3 cut(s) | 3970, 6654, 9099 |
| CfoI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4897, 5421, 8098 |
| Cfr10I | RCCGGY | 5 cut(s) | 143, 332, 3591, 8548, 13792 |
| Cfr9I | CCCGGG | 1 cut(s) | 461 |
| ClaI | ATCGAT | 2 cut(s) | 9232, 10475 |
| CseI | GACGC | 3 cut(s) | 263, 749, 3815 |
| CsiI | ACCWGGT | 3 cut(s) | 3415, 6733, 7542 |
| CspAI | ACCGGT | 2 cut(s) | 332, 13792 |
| DinI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| DraI | TTTAAA | 2 cut(s) | 11685, 12603 |
| DraIII | CACNNNGTG | 2 cut(s) | 3419, 7772 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2020, 7459 |
| EagI | CGGCCG | 1 cut(s) | 13670 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2020, 7459 |
| EclXI | CGGCCG | 1 cut(s) | 13670 |
| Eco105I | TACGTA | 1 cut(s) | 2459 |
| Eco147I | AGGCCT | 3 cut(s) | 323, 2304, 6116 |
| Eco24I | GRGCYC | 5 cut(s) | 5563, 6214, 10404, 10763, 12284 |
| Eco31I | GGTCTC | 7 cut(s) | 504, 3229, 5210, 7139, 7561, 13579, 13626 |
| Eco32I | GATATC | 3 cut(s) | 5200, 7747, 12683 |
| Eco47I | GGWCC | 7 cut(s) | 909, 2014, 2915, 3647, 4217, 7834, 10823 |
| Eco47III | AGCGCT | 2 cut(s) | 3384, 5420 |
| Eco52I | CGGCCG | 1 cut(s) | 13670 |
| Eco72I | CACGTG | 1 cut(s) | 9518 |
| Eco81I | CCTNAGG | 3 cut(s) | 1625, 2712, 6431 |
| Eco88I | CYCGRG | 4 cut(s) | 95, 461, 7555, 9345 |
| Eco91I | GGTNACC | 2 cut(s) | 10006, 13401 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 440, 12643 |
| EcoO109I | RGGNCCY | 8 cut(s) | 230, 909, 1504, 2014, 4345, 5258, 10400, 10401 |
| EcoO65I | GGTNACC | 2 cut(s) | 10006, 13401 |
| EcoRI | GAATTC | 8 cut(s) | 3734, 4224, 6845, 7309, 7779, 7967, 10561, 12433 |
| EcoRV | GATATC | 3 cut(s) | 5200, 7747, 12683 |
| EcoT22I | ATGCAT | 6 cut(s) | 3027, 6582, 7608, 11936, 12101, 13290 |
| EcoT38I | GRGCYC | 5 cut(s) | 5563, 6214, 10404, 10763, 12284 |
| EgeI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| EheI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| Esp3I | CGTCTC | 3 cut(s) | 167, 2978, 4760 |
| FauI | CCCGC | 1 cut(s) | 12539 |
| FauNDI | CATATG | 4 cut(s) | 5475, 8407, 10716, 11040 |
| FbaI | TGATCA | 7 cut(s) | 1468, 3121, 3478, 4588, 8824, 11421, 11551 |
| FblI | GTMKAC | 4 cut(s) | 4440, 5725, 9763, 13230 |
| FriOI | GRGCYC | 5 cut(s) | 5563, 6214, 10404, 10763, 12284 |
| FseI | GGCCGGCC | 1 cut(s) | 8552 |
| FspI | TGCGCA | 2 cut(s) | 719, 8097 |
| GlaI | GCGC | 9 cut(s) | 148, 219, 719, 1263, 3384, 3438, 4896, 5420, 8097 |
| GsaI | CCCAGC | 1 cut(s) | 13974 |
| HaeII | RGCGCY | 5 cut(s) | 150, 221, 1265, 3386, 5422 |
| HgaI | GACGC | 3 cut(s) | 263, 749, 3815 |
| HhaI | GCGC | 9 cut(s) | 149, 220, 720, 1264, 3385, 3439, 4897, 5421, 8098 |
| Hin1I | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| Hin6I | GCGC | 9 cut(s) | 147, 218, 718, 1262, 3383, 3437, 4895, 5419, 8096 |
| HinP1I | GCGC | 9 cut(s) | 147, 218, 718, 1262, 3383, 3437, 4895, 5419, 8096 |
| HincII | GTYRAC | 6 cut(s) | 55, 4855, 6230, 7305, 8076, 14152 |
| HindII | GTYRAC | 6 cut(s) | 55, 4855, 6230, 7305, 8076, 14152 |
| Hpy99I | CGWCG | 5 cut(s) | 158, 257, 388, 1179, 3809 |
| HpyCH4IV | ACGT | 8 cut(s) | 1615, 2458, 3673, 4769, 9517, 11479, 12237, 12688 |
| HpySE526I | ACGT | 8 cut(s) | 1615, 2458, 3673, 4769, 9517, 11479, 12237, 12688 |
| Hsp92I | GRCGYC | 5 cut(s) | 147, 218, 255, 741, 1262 |
| HspAI | GCGC | 9 cut(s) | 147, 218, 718, 1262, 3383, 3437, 4895, 5419, 8096 |
| KasI | GGCGCC | 3 cut(s) | 146, 217, 1261 |
| KflI | GGGWCCC | 2 cut(s) | 909, 2014 |
| KroI | GCCGGC | 2 cut(s) | 143, 8548 |
| KroNI | GCCGGC | 2 cut(s) | 145, 8550 |
| Ksp22I | TGATCA | 7 cut(s) | 1468, 3121, 3478, 4588, 8824, 11421, 11551 |
| LguI | GCTCTTC | 4 cut(s) | 1347, 10853, 10876, 14203 |
| MabI | ACCWGGT | 3 cut(s) | 3415, 6733, 7542 |
| MaeII | ACGT | 8 cut(s) | 1615, 2458, 3673, 4769, 9517, 11479, 12237, 12688 |
| MbiI | CCGCTC | 1 cut(s) | 7629 |
| MfeI | CAATTG | 8 cut(s) | 5751, 6331, 6492, 9771, 10320, 11417, 12778, 13377 |
| MlsI | TGGCCA | 9 cut(s) | 1336, 2139, 4377, 6310, 8850, 8866, 9740, 10709, 13683 |
| MluNI | TGGCCA | 9 cut(s) | 1336, 2139, 4377, 6310, 8850, 8866, 9740, 10709, 13683 |
| Mly113I | GGCGCC | 3 cut(s) | 147, 218, 1262 |
| MmeI | TCCRAC | 8 cut(s) | 216, 328, 1411, 1659, 3284, 8300, 10532, 11015 |
| Mox20I | TGGCCA | 9 cut(s) | 1336, 2139, 4377, 6310, 8850, 8866, 9740, 10709, 13683 |
| Mph1103I | ATGCAT | 6 cut(s) | 3027, 6582, 7608, 11936, 12101, 13290 |
| MroNI | GCCGGC | 2 cut(s) | 143, 8548 |
| MroXI | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4581, 5102, 8063, 10859, 11058, 12177 |
| MscI | TGGCCA | 9 cut(s) | 1336, 2139, 4377, 6310, 8850, 8866, 9740, 10709, 13683 |
| MslI | CAYNNNNRTG | 9 cut(s) | 725, 2761, 4356, 4487, 5002, 5343, 8165, 8908, 9055 |
| Msp20I | TGGCCA | 9 cut(s) | 1336, 2139, 4377, 6310, 8850, 8866, 9740, 10709, 13683 |
| MspA1I | CMGCKG | 6 cut(s) | 2761, 5058, 7742, 10484, 11669, 13679 |
| MspCI | CTTAAG | 2 cut(s) | 4543, 11462 |
| MunI | CAATTG | 8 cut(s) | 5751, 6331, 6492, 9771, 10320, 11417, 12778, 13377 |
| MvnI | CGCG | 3 cut(s) | 2542, 3437, 4897 |
| NaeI | GCCGGC | 2 cut(s) | 145, 8550 |
| NarI | GGCGCC | 3 cut(s) | 147, 218, 1262 |
| NciI | CCSGG | 6 cut(s) | 74, 462, 463, 565, 7021, 10367 |
| NcoI | CCATGG | 7 cut(s) | 1358, 6919, 7523, 8231, 8621, 8861, 12856 |
| NdeI | CATATG | 4 cut(s) | 5475, 8407, 10716, 11040 |
| NgoMIV | GCCGGC | 2 cut(s) | 143, 8548 |
| NheI | GCTAGC | 1 cut(s) | 3344 |
| NmeAIII | GCCGAG | 4 cut(s) | 783, 8485, 9741, 13943 |
| NsbI | TGCGCA | 2 cut(s) | 719, 8097 |
| NsiI | ATGCAT | 6 cut(s) | 3027, 6582, 7608, 11936, 12101, 13290 |
| NspV | TTCGAA | 2 cut(s) | 5827, 11842 |
| OliI | CACNNNNGTG | 1 cut(s) | 2761 |
| PaeI | GCATGC | 2 cut(s) | 3352, 8896 |
| PagI | TCATGA | 3 cut(s) | 3970, 6654, 9099 |
| PaqCI | CACCTGC | 3 cut(s) | 782, 9007, 13936 |
| PasI | CCCWGGG | 2 cut(s) | 5142, 10024 |
| PceI | AGGCCT | 3 cut(s) | 323, 2304, 6116 |
| PciI | ACATGT | 5 cut(s) | 2357, 3327, 5338, 12762, 12994 |
| PciSI | GCTCTTC | 4 cut(s) | 1347, 10853, 10876, 14203 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 11839 |
| PdiI | GCCGGC | 2 cut(s) | 145, 8550 |
| PdmI | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4581, 5102, 8063, 10859, 11058, 12177 |
| Pfl23II | CGTACG | 1 cut(s) | 7996 |
| PflFI | GACNNNGTC | 2 cut(s) | 10961, 12367 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2249, 3419, 4640, 10024 |
| PfoI | TCCNGGA | 8 cut(s) | 72, 563, 4284, 4639, 6070, 6836, 11809, 13441 |
| PinAI | ACCGGT | 2 cut(s) | 332, 13792 |
| PluTI | GGCGCC | 3 cut(s) | 150, 221, 1265 |
| PmaCI | CACGTG | 1 cut(s) | 9518 |
| PmlI | CACGTG | 1 cut(s) | 9518 |
| Ppu21I | YACGTR | 3 cut(s) | 2459, 3674, 9518 |
| PpuMI | RGGWCCY | 2 cut(s) | 909, 2014 |
| PscI | ACATGT | 5 cut(s) | 2357, 3327, 5338, 12762, 12994 |
| PshAI | GACNNNNGTC | 2 cut(s) | 42, 9317 |
| PshBI | ATTAAT | 2 cut(s) | 3020, 8919 |
| PsiI | TTATAA | 5 cut(s) | 1731, 3936, 5018, 5115, 11391 |
| Psp1406I | AACGTT | 2 cut(s) | 11479, 12237 |
| Psp5II | RGGWCCY | 2 cut(s) | 909, 2014 |
| PspCI | CACGTG | 1 cut(s) | 9518 |
| PspEI | GGTNACC | 2 cut(s) | 10006, 13401 |
| PspFI | CCCAGC | 1 cut(s) | 13970 |
| PspLI | CGTACG | 1 cut(s) | 7996 |
| PspOMI | GGGCCC | 1 cut(s) | 10400 |
| PspPPI | RGGWCCY | 2 cut(s) | 909, 2014 |
| PstNI | CAGNNNCTG | 6 cut(s) | 995, 1043, 2612, 2626, 5720, 14133 |
| PsyI | GACNNNGTC | 2 cut(s) | 10961, 12367 |
| PvuII | CAGCTG | 5 cut(s) | 2761, 5058, 7742, 10484, 13679 |
| RigI | GGCCGGCC | 1 cut(s) | 8552 |
| RseI | CAYNNNNRTG | 9 cut(s) | 725, 2761, 4356, 4487, 5002, 5343, 8165, 8908, 9055 |
| SapI | GCTCTTC | 4 cut(s) | 1347, 10853, 10876, 14203 |
| ScaI | AGTACT | 4 cut(s) | 1949, 2549, 4317, 10136 |
| SexAI | ACCWGGT | 3 cut(s) | 3415, 6733, 7542 |
| SfoI | GGCGCC | 3 cut(s) | 148, 219, 1263 |
| SfuI | TTCGAA | 2 cut(s) | 5827, 11842 |
| SinI | GGWCC | 7 cut(s) | 909, 2014, 2915, 3647, 4217, 7834, 10823 |
| SmaI | CCCGGG | 1 cut(s) | 463 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 725, 2761, 4356, 4487, 5002, 5343, 8165, 8908, 9055 |
| SnaBI | TACGTA | 1 cut(s) | 2459 |
| SpeI | ACTAGT | 2 cut(s) | 6346, 12820 |
| SphI | GCATGC | 2 cut(s) | 3352, 8896 |
| SseBI | AGGCCT | 3 cut(s) | 323, 2304, 6116 |
| SspDI | GGCGCC | 3 cut(s) | 146, 217, 1261 |
| SspI | AATATT | 8 cut(s) | 635, 1366, 1685, 2792, 3763, 5879, 6124, 6315 |
| StuI | AGGCCT | 3 cut(s) | 323, 2304, 6116 |
| TaiI | ACGT | 8 cut(s) | 1618, 2461, 3676, 4772, 9520, 11482, 12240, 12691 |
| TaqII | GACCGA | 2 cut(s) | 32, 10025 |
| TauI | GCSGC | 6 cut(s) | 180, 608, 3437, 6995, 7629, 13891 |
| TspGWI | ACGGA | 4 cut(s) | 2734, 6794, 8355, 12698 |
| TspMI | CCCGGG | 1 cut(s) | 461 |
| Tth111I | GACNNNGTC | 2 cut(s) | 10961, 12367 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2249, 3419, 4640, 10024 |
| Vha464I | CTTAAG | 2 cut(s) | 4543, 11462 |
| VneI | GTGCAC | 1 cut(s) | 9048 |
| VpaK11BI | GGWCC | 7 cut(s) | 909, 2014, 2915, 3647, 4217, 7834, 10823 |
| VspI | ATTAAT | 2 cut(s) | 3020, 8919 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 440, 12643 |
| XbaI | TCTAGA | 4 cut(s) | 31, 1246, 2156, 8984 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3267, 7543, 10232 |
| XmaI | CCCGGG | 1 cut(s) | 461 |
| XmaJI | CCTAGG | 1 cut(s) | 3515 |
| XmiI | GTMKAC | 4 cut(s) | 4440, 5725, 9763, 13230 |
| XmnI | GAANNNNTTC | 8 cut(s) | 1393, 1458, 4581, 5102, 8063, 10859, 11058, 12177 |
| ZrmI | AGTACT | 4 cut(s) | 1949, 2549, 4317, 10136 |
| Zsp2I | ATGCAT | 6 cut(s) | 3027, 6582, 7608, 11936, 12101, 13290 |