Rh4CG461100

Prokaryotic RING finger family 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0014456
Physical Location & Seq
Forward (+)
69233607 .. 69250378
16772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG461100.1

Sequence Viewer

Length: 14307 bp
ATGGAGTCTCCGTCACCGGAGTCGATATTTCTAGAAGACTTCGGTCAAAAGGTTGACCTTACCAGGCGAATCCGGGAGGTTTTGCTCAACTACCCCGAGGGAACCAACGTACTCAAAGAGTTGATTCAGAATGCTGACGATGCCGGCGCCACCGTCGTTCGTCTCTGCCTAGACCGCCGCCTCCACGGTTCCGACTCCCTTCTATCGGAGACATTGGCGCCCTGGCAGGGGCCTTCGCTCTTGGCCTATAACGACGCCGTTTTCACTGAGGAGGATTTCGTTAGCATTTCGAGGATCGGAGGGAGCAGCAAGCACGGCCAGGCCTCGAAGACCGGCCGCTTCGGGGTTGGATTCAACTCAGTGTACCATTTAACTGATTTGCCGTCGTTTGTGAGTGGGAAATATGTGGTGTTGTTTGATCCCCAAGGCATTTTCCTTCCAAAGGTTTCGGCTTCCAATCCCGGGAAGAGAATTGACTATGTTTCTTCTTCAGCCATTTCTGTATATAGAGACCAGTTCTTTCCTTACTGTGCTTTTGGCTGCGACATGAAAACGCCCTTTTCCGGGACTCTATTCCGGTTCCCTTTGAGGAATGCGGAGCAGGCGGCGACCAGTAAGCTTTCCAGGCAAGAATACTCCGAAGACGACCTCTCTTCCTTGTTGCTTCAACTGTATGAGGAAGGCATTTTCACATTGCTTTTCCTCAAAAGTGTCTTGCGCATCGAAATGTATGTGTGGGACGCCCAGGACTCTGAGCCGAGGAAGCTTTATTCGTGCTCTGTCAGTTCTGCAAGTGATGATATTGTTCGGCATCGGCAGGCAGTGTTGAGATTTCCCAAGTCGGTAAATTCTACAGAGAGTCAGGTGGACTGCTATTCAGTGGACTTTGTAAGGGAGGCAATGATAGGGACCCAATCGCAGAAGAAGACAGATAGTTTTTATCTTGTACAAGCACTGGCATCCACATCCAGTAGGATTGGCAAATTTGCAGCTACTGCTTCTAAGGAATATGATATGCACTTGCTGCCGTGGGCATCAGTTGCTGCTTGCATCACAGATAATTCAGAACAGAATGATGCTCTTAGGCTAGGTCAGGCATTCTGTTTCCTTCCTCTGCCTGTAAGAACTGGTTTGAGTGTACAAGTGAATGGATACTTTGAGGTTTCATCGAATCGTCGTGGCATCTGGTATGGGGCTGATATGGACAGAAGTGGAAAAATTCGTTCTGTCTGGAACAGGCTTCTTCTAGAAGAGGTTGTGGCGCCTGCATTTACACAACTTCTTCTGGGCATACGAGGACTGCTAGATTCGAGGAAATTGTACTATTCCTTATGGCCAAGTGGTTCTTTTGAAGAGCCATGGAATATTCTTGTTGAGCATATATACAGAAACATTTCTAATGCTCCTGTGTTATATTCGGAACTTGAAGGTGGAAAATGGGTGGCACCTGTCGAAGCTTTTCTACATGATCAGGAAGTTACTAAGAGCAAGGAACTTGGTGAGGCCCTGATTGAGCTAGGAATGCCTATTGTGGGTTTGCCTAACAATTTATTTGACATGCTCTTGAAATATGCTTCCACTTATAGGCAGAAGGTGGTCACTCCTGATACAGTACGTTGTTTCCTCAGGGAGTGCAGATTTCTTTCTACTCTTGGTAAAGCTTACAAGCTTGTATTGTTGGAATATTGTCTTGAAGATTTGCTTGATGCTGATGTTGGGACACATGCTTATAATCTGCCTTTGCTTCCATTGGCAAATGGTGAATTTGGATTGTTATCAGAAGCCTCAAAAGGAATTTCCTATTTCATTTGCAGTGATTTAGAGTTCAGGCTGCTTCAACAAATATATGATAGAATAGTTGATCGGGATATTCCTATCAATCTACTACATAGACTCTCTGCTATTGCGAAGTCCTCAAAGGCAAACCTTGTTATTTTCAATGTTCAGTACTTTCTTCAATTTTATCCAAGATTTGTACCTGCTGACTGGAAGTATAAAAGCAAAGTGCTCTGGGACCCAGAGTCTTGTCATAATCACCCTACTTCTTCATGGTTTGTGCTATTCTGGCAATATCTTCGGAATCAATGCGATAAGTTGTCTATTTTTAGTGATTGGCCTATTTTGCCTTCTACTTCTGGCCATCTGTATAGAGCCTCTAGAGAGTCAAAATTGATGAATGCAGAAAAGCTTTCAGACAAGGTGCAAGGCGTACTCGTTAAAATTGGTTGCAAGATTCTGAACCCAAATTATGGAGTTGAACACTCAGATTTATTTCATTATGTAAGTGATGGTAATGCTACAGGCCTTGTCGAATCCATATATGATGTTGTCTCTTTGAATTGTGGCACCATAGCAACATGTTTTCATAGTCTGGAAGCGGAAGAGAGGGATGAACTTCGTTCATTTCTTCTTGACCCGAAGTGGTATTTTGGAGCCTGTTTGAATGAGTCTGCCATACGTAATTGCAAGAGGCTGCCTATCTATAAAGTGTATGGTGGAGGATCTACTCAAAGTTTCCAATTCTCAGATCTTGAAAGTCCGCGAAAGTACTTACCACCGTTAGACATTCCTGAGTGCTTCCTTGGAACTGAGTTCCTTATTAGCTCAGATACTGAGCTGCAGATTCTGTTAAGATACTATGGTATTGAAAGGATGGGGAAGGCACTCTTCTACAAGCAGCAGGTTTTGAATAGAGTTGGGGAGCTGCAACCTGAGGTACGGAACAACATTGTTCTATCCATTCTACAAAACCTACCACAGCTGTGTGTTGAGGACACATCGTTCAGGGAATATTTGAGAAACTTGGAATTTCTCCCAACCCTGAGTGGTGCTCTTAGATGTCCTACTGCATTATATGATCCTCGTAATGAAGAATTATATGCACTATTAGATGATTCTGATAGTTTTCCCTACGGTCCATTCCAAGAGCCTGGTGTTTTGGACATGCTGCAAGGTTTGGGCCTTAGAACATCTGTGACCCCTGAGACGGTCATACAAAGTGCTCGACAGGTTGAACGATTAATGCATGAGGATCAGCAAAAGGCACATCTAAAAGGGAAGGTGCTTCTGTCATATTTAGAAGTTAATGCAATGAAATGGATACCCAATCTGTTAAATGGTGATCAAGGAACAGTGAACAGAATGTTCTCACGAGCTGCAACTGCATTCAGACCTCGTAACTTAAAATCTGATCTTGAGAAGTTCTGGAATGATCTTCGGCTGGTCTCTTGGTGCCCAGTTTTAGTTTCTGCTCCATTTCCAACTTTGCCGTGGCCTGTTGTGTCATCCACAGTTGCTCCTCCAAAGCTTGTGAGATTGCAAGCCGACATGTGGCTTGTTTCAGCTAGCATGCGAATTCTAGATGGAGAGTGCTCATCTACAGCGCTATCGTCTAGCCTTGGGTGGTCTTCTCCACCAGGTGGAAGTGTCATTGCAGCGCAACTACTGGAGCTTGGGAAAAACAATGAGATTGTGAATGATCAGGTTCTCCGGCAGGAGTTAGCTGTGGCTATGCCTAGGATATATTCAATACTGGCAGGTTTGATTGGTTCTGATGAGATGGACATAGTAAAGGCTGTCCTTGAGGGCAGCCGGTGGATTTGGGTGGGAGATGGATTTGCAACTGTAGATGAGGTTGTCCTTAATGGTCCCATTCATCTGGCTCCTTATATACGTGTTATACCTGTCGATCTAGCAGTTTTTAAGGAACTATTTTTGGAGCTTGGCATTCGAGAATTCCTGAAGCCTACAGACTATGCTAATATTTTGTGCAGAATGGCTTTGAAGAAAGGATCCTCTCCTCTCGACGCACAGGAAATCCGAGCAGCCTTATTGATTGTCCAGCATCTAGCTGAAGTTCAGATACATGACCAGAAAGTTAAAATTTATTTACCAGATGTATCAGGCAGATTATATCCTGCTGGTGACTTAGTTTATAATGATGCCCCTTGGTTGCTTGGGTCAGAGGATCATGATAGCCCTTTTGGTGGTTCATCTAATATGCCACTTAATGCAAGGAGAACAGTTCAAAAATTTGTGCATGGGAACATATCTATTGATGTTGCAGAGAAGCTTGGTGTCTGCTCTCTTCGTAGGATATTGCTGGCTGAGAGTGCCGATTCAATGAATCTGAGTTTATCTGGTGCTGCTGAAGCTTTTGGACAGCACGAAGCACTGACAACTAGACTTAAACACATACTTGAAATGTATGCAGATGGACCTGGAATTCTTTTTGAGCTGGTTCAAAATGCAGAGGATGCTGGAGCTTCTGAGGTGAACTTTCTCCTGGACAAAACTCAATATGGGACTTCTTCAGTACTTTCACCTGAAATGGCAGATTGGCAAGGCCCTGCGTTGTACTGTTTCAATGACTCTGTCTTCAGTCCCCAAGATCTGTATGCAATCTCACGCATTGGCCAGGAGAGCAAGCTAGAAAAACCTTTTGCTATAGGGAGATTTGGACTGGGTTTTAATTGTGTCTACCATTTTACAGACATTCCCACATTTGTTTCTGGCGAAAACATTGTTATGTTTGATCCTCATGCCTGTAATCTACCTGGGATCTCTCCCTCTCACCCTGGCTTAAGGATAAAATTTTCTGGAAGAAAGATTATGGAACAATTTCCTGATCAGTTTTCTCCTTTTTTACACTTTGGCTGTGACTTGCAGCATCCATTTCCTGGAACTCTTTTCCGGTTTCCTCTTAGGAGTGCTAGTGCTGCTTCCCGAAGCCAAATAAAGAAAGAAGGATATGCACCTGAAGATGTCATGTCCCTTTTTTCTTCCTTTGCAAAAGTTGTTTCTGAGACGTTACTTTTTCTGCGTAATGTGAAAGTCATCTCTGTTTTTGTAAAGGAAGGAAGTGGACATGAAATGCAACTTTTACATCGGGTCAACAAGCATTGCAATAGTGAGCCTGAAATGGAATCCAATGCGCGACAGGATGTGTTTAGTCTTTTTGATGGTAATCGGCATAATGGAATGGATAAAGAGCAATTTCTAAAGAAATTGAGAAAATCAGCAGATAAAGATTTGCCATACAAGTGTCAGAAGGTTATAATTACAGAGGAAAGCTCATCTGGTAATGTATCACACAGCTGGATAACCTCTGAGTGTATAGGTGGTGGACAGGCAAAGAAGAAATTCCCAGTTTTTAGTGACAAGTCTCATACTTATTTCCCCTGGGCATGTGTTGCTGCATATTTATACTCTTCCAAGGTTGGTTTGCAAACAAATGATATCTCGGAGAACAACGAGACCTGTGCTGTTACTTCCAATTTATTTCAAGTCCCTCCAGGCCCCTCTGAAGATAGAAAAGATCTTGAGGGCCGTGCTTTCTGTTTTCTACCACTGCCAATTACTACTGGTCTTCCAGCACATGTTAATGCTTATTTCGAGTTATCGTCAAATAGGAGGGACATCTGGTTTGGTAATGACATGGCTGGTGGTGGAAAGAAGCGCTCAGATTGGAATATGTACTTGCTTGAAGGAGTAGTTGCCCCTGCTTATGGGCATATGCTAGAGAAAATTGCACCTGAAATTGGCCCATGTGAGTTGTTCTTTTCACTTTGGCCTAAAACAAGAGGATTGGAACCTTGGGCTTTAGTGGTGCGGGAACTTTATATGTTTATTGCTGATTGTGGCCTTCGTGTATTATATACAAAAGCTCGAGGAGGCCAGTGGATCTCAACCAAACAAGCTATATTTCCTGACTTTACTTTCGACAAGGTTGATGAGCTTATTGAAGCATTATCAGATGCTGGTCTACCTCTGGTCACTGTTTCCAAGCCAATTGTTGAGAGGTTTATGGATGTGTGCCCTGCCTTGCATTTTTTGACACCAGAGTTGTTGAAGACTTTGTTAATTCGAAGGAAACGGGAATTTAAGGATAGAAACACAATGGTATTGGCCCTTGAATATTGTTTACTTGACTTGAAGATGCCTGTTCAATCTGCTGGTTTGTATGGTTTGCCTTTATTACCCCTTGCTGATGGTTCATTTACCATAATCGACAAAAAGGGGATTGGGGAAAGAATATATATCGCACGAGGGGATGAGTATGATCTTCTCAAGGATTCGGTTCCAAATCTACTTGTAGATTGCACAATTCCTGGAGGAGTTTATGAGAAGCTGTGTTACATAGCCCAAAGCGAGGCCTCCAATATTTCTTTTCTGTCATGTCTTTTACTGGAGAAACTCTTTTTAAGAATACTTCCTGCAGAGTGGCATCATGCAAAACAGGTGACATGGGCTCCTGGTCAGCAAGGTCAACCGAGTTTAGAGTGGGTAAGACTTCTCTGGAGCTATTTGAGGTCATCTTGTGATGACTTGTCACTTTTTTCTAAATGGCCAATATTGCCTGTTGGTAACAATTGTCTCTTGCAACTAGTTGACAATTCAAACATAATAAAGGATGATGGGTGGAGTGAGAAGATGTCAGCTTTGTTGCTGAAAATAGGATGCGTTTTCCTGAGGCACGACCTTGCAGTAGATCATCCTCAGTTGAAAAGATTTGTGCAGTTGCCAACAGCAATTGGCTTATTGAATGCGTTTCTGGCAGTTGCAGGTAAGCCAGAGAACATTGAGGGGCTTTTTAACGATGCAACAGAAGGAGAGATGCATGAACTTCGGAGTTTCATTCTTCAGTCCAAGTGGTTTATCGAAGAGAAAATGGAAGATAAGCATATTGACATCATGAAACACCTTCCTATGTTTGAGTCATATAAGAGCAGAAAGTTTGTAAGTTTGAGTAATCCTGTCAAATTGCTTAAACCTGGTGATATTCAGGAGGATTTTCTGAGTGATGACTTTGTACGCACGGAATCAGAGAAAGAAAAAATTATTTTGAGAAGATATTTAGAGATTGAAGAACCCTCCAGGATGGAATTCTACAGAGATCATTTGCTTAACCGTATGTCAAAATTCCTATCAGAGCAAGGATCTCTTACAGCCATTCTCCATGGAGTGCAGGTTTTAGTTGAAGAGGATAATTCTTTGAAATCTGCAATTTCTGAAATACCTTTCGTTTTGGCGGCTGATGGATCTTGGCAGAAGCCTTCCCGGCTCTATGATCCTAGAGTCGCTGCTTTAAGAAAGGTGCTACATGGAGAAGTTTTTTTCCCTTCTGACAAGTTCTCAGATACCGAGACTCTGGATATATTGAATACACTTGGTCTCAGAAAAACTCTGGGCTATTCTGGTTTAATTGATTGTGCTAGATCAGTTTCATTGCTGCATTTTTCAAGGGATTCAGAGACACTAAGTTATGGGAGAAAGTTACTTGTTTGTTTAGATGCTCTATCATGTAAGCTCTCAACTGAGGAAGAAGGAAATCTTGATGAGTCAACGAATTCTGTTTTCCAAAACGACACTAGAACCGAAGATGGTGATGTTATGTACATTGAGTCTCCCAAGAGCAATGAGAACATAAAAATTGATGATCGGGAGATAAATTCTTTTGTTGACGACTTGATTGGTGATAAACCAGAAGAGGACTTTTGGTCTGAAATGAGGGCTATTGCTTGGTGTCCTGTATGTGTTGATCCACCTCTCAAAGGAATCCCATGGTTGAAATCCAGTAACCAGGTGGCATCCCCGAGCAATGTGAGACCTAAATCCCAGATGTTTATGGTTTCCTACTCGATGCATATACTAGATGGTGTATGCCGCTCAACATACCTACAAAAAAAGCTTGGCTGGATGGATCCACCGAACATAAATGTTTTGTCCACGCAGTTGATTGAGCTACCTAAGCTGTATTTTCAGCTTAAATCACATTCAGCTGATATCCAAGATGTCGATGCTGCACTTTGTGAGGGAATTCCATCACTCTATTCAAAATTGCAAGAATATATTGGCACTGATGAATTTTCGGACCTAGAATTAGCATTACATGGTGTTTCCTGGGTTTGGATCGGGGATAACTTTGTAGCTCCAAATGCACTTGCATTTGATTCGCCTGTGAAATTTACTCCATACTTGTATGTTGTCCCATCTGAATTATCGGAATTCAGAGATTTGCTGATAAAGTTAGGCGTACGAATTAGTTTTGATATATGGGACTATTTGCATGTCTTGCAACGCTTGCAGAATGATGTGAAAGGATTCCCACTGTCAACAGATCAGTTAAATTTTGCGCATTGTGTCCTTGATGCTGTAGCAGACTGTTGCTCAGAGAAACCACCATTTGAAGCTTCTAACACTCCAATGTTAATTCCAGATTTTTCTGGAGTTCTGATGGATGCTGGCGATCTTGTGTATAATGATGCACCATGGATGGAACACAGTACTCTTGTGGGGAAACATTTTGTACATCCAACTATCAGCAATGATCTGGCAAATAGATTGGGGGTACAGTCACTTCGTAGCCTCTCTTTAGTTGATGATGAAATGACTAAAGATATTCCGTGCATGGACTATGCTAGAATAAAAGAGCTTTTAGCTTCATATGGGGACAATGACTTGTTATTGTTTGACCTGCTTGAGTTGGCAGATTGTTGCAAAGCTAATAAGTTGCACCTAATCTTTGACAAGAGGGAACATCCTCGGCAGTCTTTGCTGCAGCACAATATGGGGGAATTTCAAGGGCCGGCCTTATTAGCCATATTGGAAGGAGCGAACTTGAGTAGAGAGGAAGTAAGTAGTCTCCAATTTTTACCTCCATGGAGACTAAGGGGTGCTACTGTGAACTATGGTTTGGCTTTGCTTAGCTGCTATTTTGTCTGTGATCTCCTCTCTGTTGTTTCTGGTGGCTACTTTTATATGTTTGATCCCCGTGGTTCAGTGCTTGCTGCACCTTCAAGTTGTACTCCTGCGGCTAAAATGTTTTCTCTGACAGGTACAAATTTAACTGATCGGTTTCGTGATCAATTTAATCCTATGCTGATTGGCCACAGTATGCCATGGCCATCATCGGATTCTACTATTATTCGCATGCCTCTATCATCTGAATGTTTGATTAATGAACTTGAGTTTGGATTAAGAAAAATAAAGCAGATTACTGAGAGATTTTTGGAGCACTCTTCTAGATCACTTTTATTCTTGAAGTCAGTAATGCAGGTGTCGATCTCCACATGGGAGGAAGGAAGTGCACAGCCATGTCAGGACTATTCAGTTAGCATTGATTCATCATCTGCTATCATGAGGAATCCATTTTCGGAAAAGAAATGGAGGAAGTTCCAAATATCCCGATTATTTAATAGCTTCAATGCTGCAACAAAATTGCAAGTAATAGATGTGAACTTGAACCAAGGCAAAGCAAGAGTTGTTGATCGATGGCTTGTTGCACTTAGCCTGGGATCTGGGCAAACAAGAAATATGGCTCTTGATAGGCGTTATCTGGCATACAACTTGACACCTGTCGCTGGAGTTGCAGCACATATATCCCGAGATGGCTATCCTGTTGATGTTTGTCTAACGAGTTCTATCATGTCCCCTCTTCCTTTGTCTGGAGGTATAAATATACCTGTTACTGTTCTTGGATGCTTCCTGGTTTGTCACAATGGAGGTCGCTCTCTCTTTAATTATCAAGACAAAGAAGCTTCTTCAGCAGAGGCACGTGTGGATGCTGGAAATCTGTTAATGGAAGCTTGGAACAAAGAGCTGATGTCATGTGTTCGTGATTCCTACGTCGAATTGATATTGGAAATCCAGAGGTTAAGAATAGATCCTTCTAGTTCCGCAACTGAATCAAGTGCAGGTCTTGCAGTCAGCCTGTCTTTGAAGGGCTATGGAGATCAAATTTATTCCTTTTGGCCGAGGTCTAACAGGCATAATTTGGCCAAACAACCAGGAGATGGCAGTATACCTTCAATTGAAGTGCCTAAATCAGATTGGGAATGTGTAATTGAACAGGTGATAAGTCCTTTTTATGCTCGTATAGTTGATCTTCCTGTGTGGCAACTTTACTCAGGAAATTTTGCCAAGGCTGAAGAGGGTATGTTTCTTTCACAACCTGGACATGGGGTGGGTGGGAACTTACTTCCGGCTACAGTTTGCAGCTTTGTAAAGGAGCACTACCCAGTGTTTTCAGTACCTTGGGAGTTGGTGACCGAAATCCAAGCCCTGGGGATTACAGTTCGGGAAGTGAAACCAAAGATGGTTCGGAATCTGTTAAGAGCTTCTTCATCATCTATTGTTCTCCGATCAGTTGATATGTATGCAGATGTTCTTGAGTACTGCTTGTCTGATATTGAGATTGGAGATTCATTCAATTCAGCTGGAAATTCTCTGACAGTTGACAACAGTAACACTAGAGGGGATAGCCAAGTTGTTGGTGGGAGTTCTGCTTCCCAGTCAGTTACTAATTTGCATACTTATCCAGCATCTTCTACACAGAATGCTACCAGTTCAGGAGATGCAATTGAGATGGTGACAAGTTTGGGCAAGGCTTTACTTGATTTTGGCCGGGGAGTCGTTGAGGATATTGGTAGGTCTGGGGGGCCCTTGGTTCAGAGGAACATGGTTGCAGGTAGTAGTAACAGCATCTATGGAAATGGAGACATGAATCTTCTATCGATAGCAGCTGAACTCAAAGGTTTGCCATGTCCAACTGCAGCAAACCGTTTAACTAAGTTGGGGTTTACTGAACTTTGGGTTGGGAATTCAGAGCAGCAGGCATTGATGGTTTCCTTGGCTGAAAAGTTTGTTCACCCTAAAGTATTGGATAGATCAATCCTTGCTGACATATTTTCAAATGGTGTGCTACAATCATTATTAAAACTGCGAAGTTTCTCTCTTCATTTACTGGCCAGTCATATGAAGTTCGTTTTTCAGGATAACTGGGCGAGTTATGTAATGGGCTCAAATATGGTTCCTTGGTTTTCATGGGAGAATAGTAAATCAAGCTCTGGTGGTGAAGGTGGTCCTTCTCCTGAATGGATACGGCTCTTCTGGAAGAACTTCAATGGCTCTTCGGAAGATCTTTTGCTCTTTTATGATTGGCCTCTAATTCCTGCTTTTCTTGGTCGGCCAATCTTATGCCGTGTCAGGGAGCGTGACTTGGTCTTCATTCCACCACTTCTTATCGATCCAACTTCAGAAGAAAATGCTTTGGAAACGAGTGCAACTGGAAGCAATCATATGCCTGAATCTGAATCAATTCAAGCATACATTTCAGCTTTTGAAGTAGCTAAAAACCAACACCCTTGGTTGTTATCACTTCTGAATCACTGCAACATACCTATATTTGATATAGGTTTTTTACACTGTGCTGCCCCAAGCAACTGCTTCCCTCCCCCTGACCAATCATTAGGGCAAGTTATTGCTTCTAAGTTGGTTGCAGCTAAAAATGCTGGCTATTTCTCCGAAGTCACTTCCCTTTCAGCTTCAAATTGTGATGCACTTTTTGCACTTTTTGCTAATGATTTCTTGTCTAATGGCTCTAATTACAGAAGGGAAGAACTTGAAGTTTTGCGTTCACTTCCTATTTATAAAACAGTTGTGGGTTCTTACACACGATTGATCAGTGATGATCTGTGTATGATCTCCACAAATTCATTCCTTAAGCCCTATGATGAACGTTGTCTTTCCTATACCACTGATTCAGTTGAATTTGCATTACTTCGAGCACTTGGAGTCCCTGAATTGCATGATCAACAGATTTTAATTAGGTTTGGGTTGCCTGGGTTTGAAGGTAAGCCTGAACCTGAAAAGGAAGATATATTGATATATCTTTACACAAATTGGCAAGATCTCCAAATGGATACCGCTGTAGTTGAAGCTTTAAAGGAGACTAAATTTGTAAGGAATGCTGATGAGTTTTGCACAGATCTGTATAAGCCCAAGGATTTATTTGATCCTGGTGATGCTTTATTAACATCTGTTTTCTCTGGTGAGAGGAAAAAGTTTCCAGGAGAAAGGTTTTTTGCTGATCGGTGGCTTCGAATTTTAAGGAAAACTGGCCTACGAACTGCAATAGAATCTGATGTAATACTTGAATGTGCCAAAAGAGTGGAATTTCTTGGAAGTGAATGCATGAGATCCAGAGATTTGGATGATTTTGACGACCTAACCAACTCTCAGAGTGAAGTTTCCATGGAAGTATGGACGTTAGCTGGATCTGTTGTTGAAGCAATTTTCTCGAACTTTGCTGTCCTCTACGGCAACAACTTCTGTGATCTCCTTGGAAAGATTAAATGCATACCTGCTGAATTTGGCTTTCCAAATGTCGCTGGAAAAAAAGGTGGCAAGAGAGTGCTCACTTCATATAGTGAAGCTATTCTGCTAAGGGATTGGCCTCTGGCTTGGAGCTGTGCTCCCATTCTTTCGAGACAAAATGTTGTTCCTCCCGATTACTCTTGGGGATCCCTCCAGCTTAGGAGCCCTCCAGCTTTTCCTACAGTAATAAAGCACTTGCAGATTATTGGGAGAAATGGTGGTGAAGACACACTTGCTCATTGGCCGACTGTGTCTGGTATGATGACTGTTGATGAAGCTTCTTGTGAGGTGTTGAAGTACCTGGATAAGATTTGGAATTCTCTCTCTTCTTCAGATATAATGGACTTACAGAGAGTACCATTTATACCTGCTGCAAATGGTACACGCTTGGTGACTGCGAACCTGCTTTTTGCCCGCCTAACAATTAACTTATCCCCATTTGCGTTTGAACTTCCTACATCATATCTTCCCTTTTTGAAGATTTTAAAAGATTTGGGACTTCAGGACATGCTATCGATTGCCTCTGCAAGGGATCTTCTCTTGAATCTTCAGAAAACTTGTGGATATCAACGTCTAAATCCAAATGAACTCCGTGCTGTGCTAGAAATTTTGTATTTTATCTGTGAGGGGGTTACTGCAGATGACATGTCTAATGGCCCCAATTGGACATCAGCAGCAATAGTCCCTGATGATAGCTGCAGACTAGTTCATGTGAAATCCTGTGTGTATATTGATTCCCATGGATCCCGATTTGTAAAGTGCATTGACCCGTCCAGGTTAAGATTTATTCACCCAGATCTTCCAGAGAGATTTTGTACTGTTCTGGGAATCAAGAAGCTGTCTGATGTAGTCATAGAGGAATTAGATCACGAGGAACATGTGGAAACTTTGGATCATATTGGATCAGTTCCAATTGTAGCCATTCGAGAGAAACTGTTGAGCAAGTCACTTCAGAGTGCTGTATGGACAGTTGTAAACAGCATGGCTAGTTACATTCCTGCAATTAAGCATTTAACTGTGGAAACCATACAAAACTTATTAGAATCTGTTGCGGAAAAGTTGCAGTTTGTTAAGTGCCTCCATACTCGCTTTTTGCTCCTCCCACATTCTGTAGACATTACCCATGCTGCTAAGGATTCCATCATTCCAGAGTGGGTCAATGGATCCATGCATCGGACACTTTACTTCATCAACCGGACTAACACCTGTATATTAGTTTCTGAACCACCACCTTATATTTCTGTTTTTGATGTTATTGCAATTGTTGTGAGTCTGGTCTTAGGGTCCCCTACTCCTTTACCTATTGGATCTTTATTCGTCTGTCCTGGAGGCTCTGAAACTGCAATCGTTGATCTTTTGAAACTTTGTTCTGACAAGCAAGAAATGGAAGCCACCAGTGGAAGCAATGGCTTGGTAGGTAAAGAACTGTTACCCCAAGATGTTCATCAAGTACAGTTTCATCCATTGAGACCCTTTTACGCTGGAGAGATAGTGGCATGGCGGTCTCAGAATGGAGAAAAGCTCAAATATGGTAGAGTTCCAGAGGATGTCCGGCCGTCAGCTGGCCAAGCATTGTATAGATTCAAGGTGGAGACTTCACTGGGTTTTATGCAACCTCTTCTATCTTCTCATGTCTTCTCGTTTAAAAGTGTAGCGATGGGAAGTGAGACTTTACCAGTGTCTATGGATGATGTTCATACAATGGATCACAGCAGAACTCGTATTGACATGCCAGAAACTTCTGGAAGTGGCAAATCAAGAGCTTCTCAGCCGCAAGCTGGCAAAGACCTGCAGTATGGCCGAGTATCACCTGCAGAACTGGTGCAAGCAGTACAAGAGATGCTCTCTGCTGCTGGGATTTATATGGATGTGGAGAAGCAGTCCCTACTGCAAAAAACATTAACGCTGCAAGAACAATTAAAAGAGTCCCAGACTTCACTTCTGCTTGAACAGGAAAAGGCTGATGTTGCAGCAAAAGAAGCTGATACAGCAAAAGCAGCATGGGTTTGCAGGGTCTGCTTGAGCGCTGAAGTTGACATAACAATAGTTCCTTGTGGTCATGTACTTTGCCGGAGGTGCTCGTCTGCCGTTTCCAGGTGTCCATTTTGTCGGCTCCAGGTTTCAAAAACTCTGAGAATTTTTCGGCCATAA

Protein Analysis

4768

Amino Acids

533.02

Weight (kDa)

5.49

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 18 - 257 2.3e-86 Sacsin domain
SACS PF25794 1389 - 1625 2.1e-77 Sacsin domain
SACS PF25794 2807 - 3036 3.8e-25 Sacsin domain
zf-C3HC4_3 PF13920 4722 - 4761 6.6e-09 Zinc finger, C3HC4 type (RING finger)
Prok-RING_4 PF14447 4722 - 4762 6.5e-06 Prokaryotic RING finger family 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014456)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23110
fragaria_vesca FvH4_4g36870 FvH4_4g36870 FvH4_4g36870
malus_domestica MD16G1001800.v1.1
prunus_persica Prupe.1G347000_v2.0.a1
pyrus_communis pycom16g00380
rosa_chinensis RchiOBHm_Chr4g0446631
rosa_laevigata RLG00000005643
rosa_multiflora Rmu_sc0001753.1_g000045
rosa_roxburghii Rroxscaffold_5G00387020
rosa_rugosa Rorug04G0373500
rosa_samantha Rh4AG434700 Rh4BG443800 Rh4CG461100 Rh4DG442600
rosa_wichuraiana Rw4G037170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1731, 3936, 5057, 11430
AarI CACCTGC 2 cut(s) 9046, 13975
Acc16I TGCGCA 2 cut(s) 719, 8136
AccB1I GGYRCC 6 cut(s) 146, 217, 1261, 1444, 2345, 3231
AccB7I CCANNNNNTGG 5 cut(s) 2249, 3419, 4679, 9794, 10063
AccBSI CCGCTC 1 cut(s) 7668
AccI GTMKAC 4 cut(s) 4479, 5764, 9802, 13269
AccII CGCG 2 cut(s) 2542, 4936
AclI AACGTT 1 cut(s) 11518
AcvI CACGTG 1 cut(s) 9557
AcyI GRCGYC 5 cut(s) 147, 218, 255, 741, 1262
AdeI CACNNNGTG 2 cut(s) 3419, 7811
AfeI AGCGCT 3 cut(s) 3384, 5459, 14182
AflII CTTAAG 2 cut(s) 4582, 11501
AflIII ACRYGT 7 cut(s) 2357, 3327, 3673, 5377, 9556, 12801, 13033
AhdI GACNNNNNGTC 2 cut(s) 2020, 7498
AhlI ACTAGT 2 cut(s) 6385, 12859
AjuI GAANNNNNNNTTGG 6 cut(s) 8678, 8710, 8955, 8987, 10578, 10610
AleI CACNNNNGTG 1 cut(s) 2761
AloI GAACNNNNNNTCC 2 cut(s) 2765, 2797
Alw44I GTGCAC 1 cut(s) 9087
AlwNI CAGNNNCTG 6 cut(s) 995, 1043, 2612, 2626, 5759, 14172
Ama87I CYCGRG 5 cut(s) 95, 461, 5667, 7594, 9384
Aor51HI AGCGCT 3 cut(s) 3384, 5459, 14182
ApaI GGGCCC 1 cut(s) 10443
ApaLI GTGCAC 1 cut(s) 9087
ArsI GACNNNNNNTTYG 4 cut(s) 5408, 5440, 5702, 5734
AseI ATTAAT 2 cut(s) 3020, 8958
Asp700I GAANNNNTTC 8 cut(s) 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216
AspA2I CCTAGG 1 cut(s) 3515
AsuC2I CCSGG 6 cut(s) 74, 462, 463, 565, 7060, 10406
AsuII TTCGAA 2 cut(s) 5866, 11881
AsuNHI GCTAGC 1 cut(s) 3344
AvaI CYCGRG 5 cut(s) 95, 461, 5667, 7594, 9384
AvaII GGWCC 8 cut(s) 909, 2014, 2915, 3647, 4217, 7873, 10862, 13440
AvrII CCTAGG 1 cut(s) 3515
AxyI CCTNAGG 3 cut(s) 1625, 2712, 6470
BaeGI GKGCMC 4 cut(s) 3236, 5819, 9091, 10443
BaeI ACNNNNGTAYC 4 cut(s) 2626, 2659, 11694, 11727
BalI TGGCCA 9 cut(s) 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722
BamHI GGATCC 5 cut(s) 3791, 7702, 12302, 12899, 13319
BanI GGYRCC 6 cut(s) 146, 217, 1261, 1444, 2345, 3231
BanII GRGCYC 4 cut(s) 6253, 10443, 10802, 12323
BarI GAAGNNNNNNTAC 8 cut(s) 1446, 1478, 3846, 3878, 6119, 6151, 8343, 8375
BauI CACGAG 3 cut(s) 3150, 6045, 13025
BbrPI CACGTG 1 cut(s) 9557
BciVI GTATCC 4 cut(s) 1145, 3093, 10872, 11695
BclI TGATCA 7 cut(s) 1468, 3121, 3478, 4627, 8863, 11460, 11590
BcnI CCSGG 6 cut(s) 74, 462, 463, 565, 7060, 10406
BcuI ACTAGT 2 cut(s) 6385, 12859
BfoI RGCGCY 6 cut(s) 150, 221, 1265, 3386, 5461, 14184
BfrI CTTAAG 2 cut(s) 4582, 11501
BfuI GTATCC 4 cut(s) 1145, 3093, 10872, 11695
BglI GCCNNNNNGGC 1 cut(s) 7060
BglII AGATCT 7 cut(s) 2527, 4390, 5317, 10918, 11689, 11767, 12952
BlnI CCTAGG 1 cut(s) 3515
BlpI GCTNAGC 1 cut(s) 8705
BmcAI AGTACT 5 cut(s) 1949, 2549, 4317, 8287, 10175
Bme18I GGWCC 8 cut(s) 909, 2014, 2915, 3647, 4217, 7873, 10862, 13440
BmeRI GACNNNNNGTC 2 cut(s) 2020, 7498
BmeT110I CYCGRG 5 cut(s) 95, 461, 5667, 7594, 9384
BmrI ACTGGG 7 cut(s) 3230, 4472, 5141, 10013, 10285, 10789, 13766
BmtI GCTAGC 1 cut(s) 3348
BmuI ACTGGG 7 cut(s) 3230, 4472, 5141, 10013, 10285, 10789, 13766
BoxI GACNNNNGTC 2 cut(s) 42, 9356
Bpu10I CCTNAGC 4 cut(s) 7749, 12224, 12314, 13287
Bpu1102I GCTNAGC 1 cut(s) 8705
Bpu14I TTCGAA 2 cut(s) 5866, 11881
BpuEI CTTGAG 9 cut(s) 3215, 3602, 5342, 6053, 8501, 8641, 8987, 10190, 14197
BpuMI CCSGG 6 cut(s) 74, 462, 463, 565, 7060, 10406
Bsa29I ATCGAT 4 cut(s) 9271, 10514, 11025, 12671
BsaAI YACGTR 3 cut(s) 2459, 3674, 9557
BsaBI GATNNNNATC 4 cut(s) 1774, 4965, 9393, 13599
BsaHI GRCGYC 5 cut(s) 147, 218, 255, 741, 1262
BsaI GGTCTC 7 cut(s) 504, 3229, 5249, 7178, 7600, 13618, 13665
BsaWI WCCGGW 4 cut(s) 16, 576, 4692, 13350
Bse118I RCCGGY 4 cut(s) 143, 332, 3591, 8587
Bse21I CCTNAGG 3 cut(s) 1625, 2712, 6470
Bse8I GATNNNNATC 4 cut(s) 1774, 4965, 9393, 13599
BseCI ATCGAT 4 cut(s) 9271, 10514, 11025, 12671
BseJI GATNNNNATC 4 cut(s) 1774, 4965, 9393, 13599
BseRI GAGGAG 7 cut(s) 284, 3288, 3789, 5685, 6129, 8720, 13244
BseSI GKGCMC 4 cut(s) 3236, 5819, 9091, 10443
BseX3I CGGCCG 2 cut(s) 334, 13709
BseYI CCCAGC 1 cut(s) 14009
BsgI GTGCAG 7 cut(s) 1654, 3790, 6536, 6986, 7788, 8775, 9714
Bsh1236I CGCG 2 cut(s) 2542, 4936
Bsh1285I CGRYCG 2 cut(s) 337, 13712
BshNI GGYRCC 6 cut(s) 146, 217, 1261, 1444, 2345, 3231
BshVI ATCGAT 4 cut(s) 9271, 10514, 11025, 12671
BsiEI CGRYCG 2 cut(s) 337, 13712
BsiHKCI CYCGRG 5 cut(s) 95, 461, 5667, 7594, 9384
BsiWI CGTACG 1 cut(s) 8035
BsmBI CGTCTC 3 cut(s) 167, 2978, 4799
Bso31I GGTCTC 7 cut(s) 504, 3229, 5249, 7178, 7600, 13618, 13665
BsoBI CYCGRG 5 cut(s) 95, 461, 5667, 7594, 9384
Bsp119I TTCGAA 2 cut(s) 5866, 11881
Bsp120I GGGCCC 1 cut(s) 10439
Bsp1407I TGTACA 4 cut(s) 946, 1138, 7395, 8308
Bsp1720I GCTNAGC 1 cut(s) 8705
Bsp19I CCATGG 8 cut(s) 1358, 6958, 7562, 8270, 8660, 8900, 12033, 12895
BspDI ATCGAT 4 cut(s) 9271, 10514, 11025, 12671
BspFNI CGCG 2 cut(s) 2542, 4936
BspHI TCATGA 3 cut(s) 3970, 6693, 9138
BspMAI CTGCAG 8 cut(s) 2622, 6220, 8562, 10555, 12796, 12857, 13950, 13972
BspOI GCTAGC 1 cut(s) 3348
BspQI GCTCTTC 3 cut(s) 1347, 10892, 10915
BspT104I TTCGAA 2 cut(s) 5866, 11881
BspT107I GGYRCC 6 cut(s) 146, 217, 1261, 1444, 2345, 3231
BspTI CTTAAG 2 cut(s) 4582, 11501
BspTNI GGTCTC 7 cut(s) 504, 3229, 5249, 7178, 7600, 13618, 13665
BsrBI CCGCTC 1 cut(s) 7668
BsrFI RCCGGY 4 cut(s) 143, 332, 3591, 8587
BsrGI TGTACA 4 cut(s) 946, 1138, 7395, 8308
BssAI RCCGGY 4 cut(s) 143, 332, 3591, 8587
BssNAI GTATAC 1 cut(s) 9803
BssNI GRCGYC 5 cut(s) 147, 218, 255, 741, 1262
BssSI CACGAG 3 cut(s) 3150, 6045, 13025
Bst1107I GTATAC 1 cut(s) 9803
Bst2BI CACGAG 3 cut(s) 3150, 6045, 13025
BstACI GRCGYC 5 cut(s) 147, 218, 255, 741, 1262
BstAFI CTTAAG 2 cut(s) 4582, 11501
BstAUI TGTACA 4 cut(s) 946, 1138, 7395, 8308
BstBAI YACGTR 3 cut(s) 2459, 3674, 9557
BstBI TTCGAA 2 cut(s) 5866, 11881
BstEII GGTNACC 1 cut(s) 10045
BstENI CCTNNNNNAGG 3 cut(s) 440, 7551, 12682
BstFNI CGCG 2 cut(s) 2542, 4936
BstH2I RGCGCY 6 cut(s) 150, 221, 1265, 3386, 5461, 14184
BstMCI CGRYCG 2 cut(s) 337, 13712
BstPAI GACNNNNGTC 2 cut(s) 42, 9356
BstPI GGTNACC 1 cut(s) 10045
BstSLI GKGCMC 4 cut(s) 3236, 5819, 9091, 10443
BstSNI TACGTA 1 cut(s) 2459
BstUI CGCG 2 cut(s) 2542, 4936
BstXI CCANNNNNNTGG 5 cut(s) 2930, 3658, 10271, 11950, 11989
BstZ17I GTATAC 1 cut(s) 9803
BstZI CGGCCG 2 cut(s) 334, 13709
Bsu15I ATCGAT 4 cut(s) 9271, 10514, 11025, 12671
Bsu36I CCTNAGG 3 cut(s) 1625, 2712, 6470
BsuI GTATCC 4 cut(s) 1145, 3093, 10872, 11695
BsuTUI ATCGAT 4 cut(s) 9271, 10514, 11025, 12671
BtgZI GCGATG 1 cut(s) 13826
BtsI GCAGTG 4 cut(s) 828, 1819, 5348, 11167
CaiI CAGNNNCTG 6 cut(s) 995, 1043, 2612, 2626, 5759, 14172
CciI TCATGA 3 cut(s) 3970, 6693, 9138
Cfr10I RCCGGY 4 cut(s) 143, 332, 3591, 8587
Cfr9I CCCGGG 1 cut(s) 461
ClaI ATCGAT 4 cut(s) 9271, 10514, 11025, 12671
CseI GACGC 3 cut(s) 263, 749, 3815
CsiI ACCWGGT 3 cut(s) 3415, 6772, 7581
DinI GGCGCC 3 cut(s) 148, 219, 1263
DraI TTTAAA 3 cut(s) 11724, 12642, 13801
DraIII CACNNNGTG 2 cut(s) 3419, 7811
DriI GACNNNNNGTC 2 cut(s) 2020, 7498
EagI CGGCCG 2 cut(s) 334, 13709
Eam1105I GACNNNNNGTC 2 cut(s) 2020, 7498
EclXI CGGCCG 2 cut(s) 334, 13709
Eco105I TACGTA 1 cut(s) 2459
Eco147I AGGCCT 3 cut(s) 323, 2304, 6155
Eco24I GRGCYC 4 cut(s) 6253, 10443, 10802, 12323
Eco31I GGTCTC 7 cut(s) 504, 3229, 5249, 7178, 7600, 13618, 13665
Eco32I GATATC 3 cut(s) 5239, 7786, 12722
Eco47I GGWCC 8 cut(s) 909, 2014, 2915, 3647, 4217, 7873, 10862, 13440
Eco47III AGCGCT 3 cut(s) 3384, 5459, 14182
Eco52I CGGCCG 2 cut(s) 334, 13709
Eco72I CACGTG 1 cut(s) 9557
Eco81I CCTNAGG 3 cut(s) 1625, 2712, 6470
Eco88I CYCGRG 5 cut(s) 95, 461, 5667, 7594, 9384
Eco91I GGTNACC 1 cut(s) 10045
EcoNI CCTNNNNNAGG 3 cut(s) 440, 7551, 12682
EcoO109I RGGNCCY 9 cut(s) 230, 909, 1504, 2014, 4346, 5297, 10439, 10440, 13440
EcoO65I GGTNACC 1 cut(s) 10045
EcoRI GAATTC 9 cut(s) 3354, 3734, 4224, 6884, 7348, 7818, 8006, 10600, 12472
EcoRV GATATC 3 cut(s) 5239, 7786, 12722
EcoT22I ATGCAT 6 cut(s) 3027, 6621, 7647, 11975, 12140, 13329
EcoT38I GRGCYC 4 cut(s) 6253, 10443, 10802, 12323
EgeI GGCGCC 3 cut(s) 148, 219, 1263
EheI GGCGCC 3 cut(s) 148, 219, 1263
Esp3I CGTCTC 3 cut(s) 167, 2978, 4799
FauI CCCGC 2 cut(s) 5604, 12578
FauNDI CATATG 4 cut(s) 5514, 8446, 10755, 11079
FbaI TGATCA 7 cut(s) 1468, 3121, 3478, 4627, 8863, 11460, 11590
FblI GTMKAC 4 cut(s) 4479, 5764, 9802, 13269
FriOI GRGCYC 4 cut(s) 6253, 10443, 10802, 12323
FseI GGCCGGCC 1 cut(s) 8591
FspI TGCGCA 2 cut(s) 719, 8136
GsaI CCCAGC 1 cut(s) 14013
HaeII RGCGCY 6 cut(s) 150, 221, 1265, 3386, 5461, 14184
HgaI GACGC 3 cut(s) 263, 749, 3815
Hin1I GRCGYC 5 cut(s) 147, 218, 255, 741, 1262
HincII GTYRAC 9 cut(s) 55, 4894, 6269, 6391, 7344, 7462, 8115, 10237, 14191
HindII GTYRAC 9 cut(s) 55, 4894, 6269, 6391, 7344, 7462, 8115, 10237, 14191
Hpy99I CGWCG 6 cut(s) 158, 257, 388, 1179, 3809, 9632
Hsp92I GRCGYC 5 cut(s) 147, 218, 255, 741, 1262
KasI GGCGCC 3 cut(s) 146, 217, 1261
KflI GGGWCCC 3 cut(s) 909, 2014, 13440
KroI GCCGGC 2 cut(s) 143, 8587
KroNI GCCGGC 2 cut(s) 145, 8589
Ksp22I TGATCA 7 cut(s) 1468, 3121, 3478, 4627, 8863, 11460, 11590
LguI GCTCTTC 3 cut(s) 1347, 10892, 10915
MabI ACCWGGT 3 cut(s) 3415, 6772, 7581
MbiI CCGCTC 1 cut(s) 7668
MfeI CAATTG 8 cut(s) 5790, 6370, 6531, 9810, 10359, 12817, 13068, 13416
MlsI TGGCCA 9 cut(s) 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722
MluNI TGGCCA 9 cut(s) 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722
Mly113I GGCGCC 3 cut(s) 147, 218, 1262
MmeI TCCRAC 7 cut(s) 216, 328, 1659, 3284, 8339, 10571, 11054
Mox20I TGGCCA 9 cut(s) 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722
Mph1103I ATGCAT 6 cut(s) 3027, 6621, 7647, 11975, 12140, 13329
MroNI GCCGGC 2 cut(s) 143, 8587
MroXI GAANNNNTTC 8 cut(s) 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216
MscI TGGCCA 9 cut(s) 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722
MslI CAYNNNNRTG 8 cut(s) 725, 2761, 4526, 5041, 5382, 8204, 8947, 9094
Msp20I TGGCCA 9 cut(s) 1336, 2139, 4416, 6349, 8889, 8905, 9779, 10748, 13722
MspA1I CMGCKG 7 cut(s) 2761, 5097, 7781, 10217, 10523, 11708, 13718
MspCI CTTAAG 2 cut(s) 4582, 11501
MunI CAATTG 8 cut(s) 5790, 6370, 6531, 9810, 10359, 12817, 13068, 13416
MvnI CGCG 2 cut(s) 2542, 4936
NaeI GCCGGC 2 cut(s) 145, 8589
NarI GGCGCC 3 cut(s) 147, 218, 1262
NciI CCSGG 6 cut(s) 74, 462, 463, 565, 7060, 10406
NcoI CCATGG 8 cut(s) 1358, 6958, 7562, 8270, 8660, 8900, 12033, 12895
NdeI CATATG 4 cut(s) 5514, 8446, 10755, 11079
NgoMIV GCCGGC 2 cut(s) 143, 8587
NheI GCTAGC 1 cut(s) 3344
NmeAIII GCCGAG 4 cut(s) 783, 8524, 9780, 13982
NsbI TGCGCA 2 cut(s) 719, 8136
NsiI ATGCAT 6 cut(s) 3027, 6621, 7647, 11975, 12140, 13329
NspV TTCGAA 2 cut(s) 5866, 11881
OliI CACNNNNGTG 1 cut(s) 2761
PaeI GCATGC 2 cut(s) 3352, 8935
PaeR7I CTCGAG 1 cut(s) 5667
PagI TCATGA 3 cut(s) 3970, 6693, 9138
PaqCI CACCTGC 2 cut(s) 9046, 13975
PasI CCCWGGG 2 cut(s) 5181, 10063
PceI AGGCCT 3 cut(s) 323, 2304, 6155
PciI ACATGT 5 cut(s) 2357, 3327, 5377, 12801, 13033
PciSI GCTCTTC 3 cut(s) 1347, 10892, 10915
PcsI WCGNNNNNNNCGW 1 cut(s) 11878
PdiI GCCGGC 2 cut(s) 145, 8589
PdmI GAANNNNTTC 8 cut(s) 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216
Pfl23II CGTACG 1 cut(s) 8035
PflFI GACNNNGTC 3 cut(s) 4373, 11000, 12406
PflMI CCANNNNNTGG 5 cut(s) 2249, 3419, 4679, 9794, 10063
PfoI TCCNGGA 8 cut(s) 72, 563, 4284, 4678, 6109, 6875, 11848, 13480
PluTI GGCGCC 3 cut(s) 150, 221, 1265
PmaCI CACGTG 1 cut(s) 9557
PmlI CACGTG 1 cut(s) 9557
Ppu21I YACGTR 3 cut(s) 2459, 3674, 9557
PpuMI RGGWCCY 3 cut(s) 909, 2014, 13440
PscI ACATGT 5 cut(s) 2357, 3327, 5377, 12801, 13033
PshAI GACNNNNGTC 2 cut(s) 42, 9356
PshBI ATTAAT 2 cut(s) 3020, 8958
PsiI TTATAA 4 cut(s) 1731, 3936, 5057, 11430
Psp1406I AACGTT 1 cut(s) 11518
Psp5II RGGWCCY 3 cut(s) 909, 2014, 13440
PspCI CACGTG 1 cut(s) 9557
PspEI GGTNACC 1 cut(s) 10045
PspFI CCCAGC 1 cut(s) 14009
PspLI CGTACG 1 cut(s) 8035
PspOMI GGGCCC 1 cut(s) 10439
PspPPI RGGWCCY 3 cut(s) 909, 2014, 13440
PspXI VCTCGAGB 1 cut(s) 5667
PstI CTGCAG 8 cut(s) 2622, 6220, 8562, 10555, 12796, 12857, 13950, 13972
PstNI CAGNNNCTG 6 cut(s) 995, 1043, 2612, 2626, 5759, 14172
PsyI GACNNNGTC 3 cut(s) 4373, 11000, 12406
PvuII CAGCTG 6 cut(s) 2761, 5097, 7781, 10217, 10523, 13718
RigI GGCCGGCC 1 cut(s) 8591
RseI CAYNNNNRTG 8 cut(s) 725, 2761, 4526, 5041, 5382, 8204, 8947, 9094
SapI GCTCTTC 3 cut(s) 1347, 10892, 10915
ScaI AGTACT 5 cut(s) 1949, 2549, 4317, 8287, 10175
SexAI ACCWGGT 3 cut(s) 3415, 6772, 7581
SfoI GGCGCC 3 cut(s) 148, 219, 1263
Sfr274I CTCGAG 1 cut(s) 5667
SfuI TTCGAA 2 cut(s) 5866, 11881
SinI GGWCC 8 cut(s) 909, 2014, 2915, 3647, 4217, 7873, 10862, 13440
SlaI CTCGAG 1 cut(s) 5667
SmaI CCCGGG 1 cut(s) 463
SmiMI CAYNNNNRTG 8 cut(s) 725, 2761, 4526, 5041, 5382, 8204, 8947, 9094
SnaBI TACGTA 1 cut(s) 2459
SpeI ACTAGT 2 cut(s) 6385, 12859
SphI GCATGC 2 cut(s) 3352, 8935
SseBI AGGCCT 3 cut(s) 323, 2304, 6155
SspDI GGCGCC 3 cut(s) 146, 217, 1261
SspI AATATT 7 cut(s) 1366, 1685, 2792, 3763, 5918, 6163, 6354
StuI AGGCCT 3 cut(s) 323, 2304, 6155
TaqII GACCGA 2 cut(s) 32, 10064
TauI GCSGC 7 cut(s) 180, 339, 608, 7034, 7668, 8816, 13930
TspGWI ACGGA 4 cut(s) 2734, 6833, 8394, 12737
TspMI CCCGGG 1 cut(s) 461
Tth111I GACNNNGTC 3 cut(s) 4373, 11000, 12406
Van91I CCANNNNNTGG 5 cut(s) 2249, 3419, 4679, 9794, 10063
Vha464I CTTAAG 2 cut(s) 4582, 11501
VneI GTGCAC 1 cut(s) 9087
VpaK11BI GGWCC 8 cut(s) 909, 2014, 2915, 3647, 4217, 7873, 10862, 13440
VspI ATTAAT 2 cut(s) 3020, 8958
XagI CCTNNNNNAGG 3 cut(s) 440, 7551, 12682
XbaI TCTAGA 5 cut(s) 31, 1246, 2156, 3358, 9023
XcmI CCANNNNNNNNNTGG 3 cut(s) 3267, 7582, 10271
XhoI CTCGAG 1 cut(s) 5667
XmaI CCCGGG 1 cut(s) 461
XmaJI CCTAGG 1 cut(s) 3515
XmiI GTMKAC 4 cut(s) 4479, 5764, 9802, 13269
XmnI GAANNNNTTC 8 cut(s) 1393, 1458, 4620, 5141, 8102, 10898, 11097, 12216
ZrmI AGTACT 5 cut(s) 1949, 2549, 4317, 8287, 10175
Zsp2I ATGCAT 6 cut(s) 3027, 6621, 7647, 11975, 12140, 13329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.