Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0014152

Physical Location & Seq

Genomic Coordinates Reverse (-)

4343041 .. 4346358

Gene Structure 3318 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1060600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGTTGCACGGCGGCGCTCTGCCAAGAACCTCGCCGCTCTTCTCCTTCTTCATCAAAATCCCACTCCCCCTAATTTTCCGAACCTCCAGCCGTTTCTTCCGCCCAATTCTCCGCTCCCCGAAACCTAAACCGACCCTGAATTCCACCGACAGCTTCTCCATGGACAAAAGACTCAACCTTTGCACTCTGGCTCTCTCCGATAACTCGCCGTCGCCGTCGTCTCCGGCGGTTTCCAACAAAGCCATGAAGAAAGCGCGGCGGGAATCTCCGGAGGGGGTCCTTAGGCACAAGCTAGACATGTGCTCCAGGCACGGCCAGCTGGTCCAAGCTCTGAGCCTTTACGACGAGGCCAGGAGCAATGGGGTCCCGCTTAGCCTGCACCATTACAATGTTTTGCTCTACCTTTGCTCCTCCAATGGCGGCGGTGATGACGGTGATATGGGTTTGAAGAGGGGGTTTGAGATTTTTCGCCAGATGGTTGAGGATAAGGTTGTCCCCAATGAGGCCACTTTTACCAGCGCGGCGAGGTTGGCAATCGCGGGGGAGGACCCGGAAATGGCGTTTCATTTGGTGAAGCAGATGAAGGGTTTAGGACTTCCGCCGAAATTGAGGTCTTACGGTCCGGCATTGTTTGAGTTCTGTAAGAAGGGGGAGGCCGATAGAGCTTATGAGGTTGATGCTCACATGGTTGAATCCGGGGTTGTGGCGGAGGAACCTGAGATCACTGCTTTGATAAAAGTTAGTTCTGATTCGAGCAGAGGTGACAAGGTTTATGAGATGTTGCACCGGTTGCGGACCACGGTGAGGCAGGTCTCGGAGTCAACTTATGGGGTGGTGGAGGAGTGGTTTAAGTCCGAGGAGGCGGCGAAAGTTGGGGTGGAGACTTGGGATGTGAATAAGGTGAGGGAAGGGGTTGTTAGAGGAGGTGGAGGGTGGCATGGGCAAGGGTGGCTTGGGAGTGGGAATTGGAGAGTGGAGAGGACTCAGATGGATGAAGCAGGGACATGCTCTTGTTGCGGCGAAAAGCTTGTCTCTATCGACATTGATCCGAAAGAGACCGAGAATTTTGCTACCTCTTTGAGCAAATTGGCTAGCCAAAGGGAGGTTCGGGGTGATTTCATTCGATTCCAGGAGTGGCTTCAAAGGCATGGTCCATTCGATGCTGTTGTAGATGGTGCCAATGTTGGTCTGGTCAATCAACATAATTTCAGCTTTTTCCAGCTCGATACTCTGGTGAACAGGTTACGCCAAATGAGCCCATCAAAGCGATTGCCACTTGTTATATTGCACCAAAATCGTGTAACTGGTGGTCCCGCTCAGAATCCTAATAACAAGAGATTGTTAGAGAGTTGGAAAAAGTCCGGTGCACTTTACTCTACTCCAGTTGGTTCAAATGATGATTGGTACTGGTTGTACGCTGCTGTTAATTGCAAGTGTTTGATGGTGACGAACGATGAGATGAGAGACCACTTGTTCCAACTTCTAGGGACTAGCTTTTTCCCAAGATGGAAGGAAAGACACCAGGTTCGATTGTCCGTATCAAGGCGCGGACTTAACCTTCATATGCCACCCCCGTATTCGATTGTAATCCAGGAAGCAGAGGATGGGGAGTGGCACGTGCCAACAACCACAGGTGACGACATTGAGACCCCAAGGCAATGGCTGTGTGCCACCAGAGCCAGAAATACCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PPR_long PRORP

Protein Analysis

565

Amino Acids

63.37

Weight (kDa)

8.67

Isoelectric Point (pI)

46.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	83 - 289	1.2e-74	Pentacotripeptide-repeat region of PRORP
PRORP	PF16953	330 - 556	3.4e-76	Protein-only RNase P

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32230 AT2G32230
fragaria_vesca	FvH4_4g29971
malus_domestica	MD13G1062300.v1.1 MD16G1060600.v1.1
prunus_persica	Prupe.1G287700_v2.0.a1
pyrus_communis	pycom16g05280
rosa_chinensis	RchiOBHm_Chr4g0438251
rosa_laevigata	RLG00000006377
rosa_multiflora	Rmu_sc0011129.1_g000009
rosa_roxburghii	Rroxscaffold_5G00379340
rosa_rugosa	Rorug04G0308300
rosa_samantha	Rh4AG359400 Rh4BG370200 Rh4DG365300
rosa_wichuraiana	Rw0G006400 Rw0G016340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	799
AccB1I	GGYRCC	1 cut(s)	1175
AccBSI	CCGCTC	3 cut(s)	37, 114, 1316
AccII	CGCG	4 cut(s)	256, 521, 539, 1548
AccIII	TCCGGA	1 cut(s)	268
AclWI	GGATC	1 cut(s)	1040
AcoI	YGGCCR	1 cut(s)	313
AcsI	RAATTY	2 cut(s)	139, 1063
AcvI	CACGTG	1 cut(s)	1618
AfaI	GTAC	2 cut(s)	1406, 1415
AfiI	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
AflIII	ACRYGT	1 cut(s)	297
AgeI	ACCGGT	1 cut(s)	786
AgsI	TTSAA	4 cut(s)	448, 692, 1142, 1392
AjnI	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
AjuI	GAANNNNNNNTTGG	2 cut(s)	1089, 1121
AluBI	AGCT	9 cut(s)	153, 292, 319, 329, 665, 1027, 1212, 1222, 1494
AluI	AGCT	9 cut(s)	153, 292, 319, 329, 665, 1027, 1212, 1222, 1494
Alw21I	GWGCWC	2 cut(s)	305, 1369
Alw26I	GTCTC	7 cut(s)	225, 817, 875, 1036, 1049, 1458, 1640
Alw44I	GTGCAC	1 cut(s)	1365
AlwI	GGATC	1 cut(s)	1040
Aor13HI	TCCGGA	1 cut(s)	268
AoxI	GGCC	4 cut(s)	313, 348, 504, 654
ApaLI	GTGCAC	1 cut(s)	1365
ApeKI	GCWGC	1 cut(s)	1418
ApoI	RAATTY	2 cut(s)	139, 1063
AsiGI	ACCGGT	1 cut(s)	786
AspLEI	GCGC	4 cut(s)	17, 256, 521, 1548
AspS9I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
AsuC2I	CCSGG	2 cut(s)	551, 697
AsuNHI	GCTAGC	1 cut(s)	1091
AvaII	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
AxyI	CCTNAGG	1 cut(s)	281
BaeGI	GKGCMC	1 cut(s)	1369
BaeI	ACNNNNGTAYC	2 cut(s)	1218, 1251
BanI	GGYRCC	1 cut(s)	1175
BanII	GRGCYC	1 cut(s)	1259
BbrPI	CACGTG	1 cut(s)	1618
Bbv12I	GWGCWC	2 cut(s)	305, 1369
BbvI	GCAGC	1 cut(s)	1405
BccI	CCATC	7 cut(s)	469, 982, 1166, 1267, 1435, 1500, 1598
BceAI	ACGGC	5 cut(s)	25, 75, 193, 199, 328
BcgI	CGANNNNNNTGC	4 cut(s)	1049, 1083, 1277, 1311
BciT130I	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
BcnI	CCSGG	2 cut(s)	551, 697
BcoDI	GTCTC	7 cut(s)	225, 817, 875, 1036, 1049, 1458, 1640
BfaI	CTAG	4 cut(s)	293, 1092, 1484, 1491
BfoI	RGCGCY	1 cut(s)	18
BfuAI	ACCTGC	1 cut(s)	799
BisI	GCNGC	8 cut(s)	13, 35, 257, 421, 522, 864, 1018, 1419
BlpI	GCTNAGC	1 cut(s)	371
BlsI	GCNGC	8 cut(s)	14, 36, 258, 422, 523, 865, 1019, 1420
Bme1390I	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
Bme18I	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
BmgT120I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
BmiI	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
BmrFI	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
BmsI	GCATC	2 cut(s)	667, 1150
BmtI	GCTAGC	1 cut(s)	1095
BpmI	CTGGAG	3 cut(s)	70, 289, 1365
Bpu1102I	GCTNAGC	1 cut(s)	371
BpuMI	CCSGG	2 cut(s)	551, 697
BsaAI	YACGTR	1 cut(s)	1618
BsaBI	GATNNNNATC	1 cut(s)	1586
BsaI	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
BsaJI	CCNNGG	5 cut(s)	159, 696, 798, 855, 1652
BsaWI	WCCGGW	3 cut(s)	268, 786, 1361
BsaXI	ACNNNNNCTCC	8 cut(s)	140, 170, 287, 317, 392, 422, 830, 860
Bsc4I	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
Bse118I	RCCGGY	1 cut(s)	786
Bse1I	ACTGG	3 cut(s)	1309, 1382, 1412
Bse21I	CCTNAGG	1 cut(s)	281
Bse3DI	GCAATG	2 cut(s)	364, 1664
Bse8I	GATNNNNATC	1 cut(s)	1586
BseAI	TCCGGA	1 cut(s)	268
BseBI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
BseDI	CCNNGG	5 cut(s)	159, 696, 798, 855, 1652
BseGI	GGATG	3 cut(s)	895, 997, 1609
BseJI	GATNNNNATC	1 cut(s)	1586
BseLI	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
BseMI	GCAATG	2 cut(s)	364, 1664
BseMII	CTCAG	4 cut(s)	323, 708, 998, 1331
BseNI	ACTGG	3 cut(s)	1309, 1382, 1412
BseRI	GAGGAG	4 cut(s)	400, 854, 872, 936
BseSI	GKGCMC	1 cut(s)	1369
BseXI	GCAGC	1 cut(s)	1405
BsgI	GTGCAG	1 cut(s)	362
Bsh1236I	CGCG	4 cut(s)	256, 521, 539, 1548
BshFI	GGCC	4 cut(s)	315, 350, 506, 656
BshNI	GGYRCC	1 cut(s)	1175
BshTI	ACCGGT	1 cut(s)	786
BsiHKAI	GWGCWC	2 cut(s)	305, 1369
BsiSI	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
BslFI	GGGAC	5 cut(s)	350, 479, 1015, 1296, 1501
BslI	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
BsmAI	GTCTC	7 cut(s)	225, 817, 875, 1036, 1049, 1458, 1640
BsmBI	CGTCTC	1 cut(s)	225
BsmFI	GGGAC	5 cut(s)	350, 479, 1015, 1296, 1501
BsnI	GGCC	4 cut(s)	315, 350, 506, 656
Bso31I	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
Bsp1286I	GDGCHC	3 cut(s)	305, 1259, 1369
Bsp13I	TCCGGA	1 cut(s)	268
Bsp143I	GATC	2 cut(s)	720, 1045
Bsp1720I	GCTNAGC	1 cut(s)	371
Bsp19I	CCATGG	1 cut(s)	159
BspANI	GGCC	4 cut(s)	315, 350, 506, 656
BspCNI	CTCAG	4 cut(s)	324, 709, 997, 1330
BspEI	TCCGGA	1 cut(s)	268
BspFNI	CGCG	4 cut(s)	256, 521, 539, 1548
BspLI	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
BspMI	ACCTGC	1 cut(s)	799
BspOI	GCTAGC	1 cut(s)	1095
BspPI	GGATC	1 cut(s)	1040
BspQI	GCTCTTC	1 cut(s)	44
BspT107I	GGYRCC	1 cut(s)	1175
BspTNI	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
BsrBI	CCGCTC	3 cut(s)	37, 114, 1316
BsrDI	GCAATG	2 cut(s)	364, 1664
BsrFI	RCCGGY	1 cut(s)	786
BsrI	ACTGG	3 cut(s)	1309, 1382, 1412
BssAI	RCCGGY	1 cut(s)	786
BssECI	CCNNGG	5 cut(s)	159, 696, 798, 855, 1652
BssMI	GATC	2 cut(s)	720, 1045
BssT1I	CCWWGG	2 cut(s)	159, 1652
Bst2UI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
Bst4CI	ACNGT	3 cut(s)	434, 620, 802
Bst6I	CTCTTC	2 cut(s)	44, 443
BstAPI	GCANNNNNTGC	1 cut(s)	790
BstBAI	YACGTR	1 cut(s)	1618
BstC8I	GCNNGC	3 cut(s)	317, 377, 1093
BstDEI	CTNAG	6 cut(s)	281, 332, 371, 717, 984, 1317
BstDSI	CCRYGG	2 cut(s)	159, 798
BstF5I	GGATG	3 cut(s)	895, 997, 1609
BstFNI	CGCG	4 cut(s)	256, 521, 539, 1548
BstH2I	RGCGCY	1 cut(s)	18
BstHHI	GCGC	4 cut(s)	17, 256, 521, 1548
BstKTI	GATC	2 cut(s)	723, 1048
BstMAI	GTCTC	7 cut(s)	225, 817, 875, 1036, 1049, 1458, 1640
BstMBI	GATC	2 cut(s)	720, 1045
BstNI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
BstNSI	RCATGY	2 cut(s)	301, 1008
BstSCI	CCNGG	7 cut(s)	305, 350, 549, 695, 1128, 1521, 1590
BstSLI	GKGCMC	1 cut(s)	1369
BstUI	CGCG	4 cut(s)	256, 521, 539, 1548
BstV1I	GCAGC	1 cut(s)	1405
BstXI	CCANNNNNNTGG	1 cut(s)	1659
Bsu36I	CCTNAGG	1 cut(s)	281
BsuRI	GGCC	4 cut(s)	315, 350, 506, 656
BtgI	CCRYGG	2 cut(s)	159, 798
BtsCI	GGATG	3 cut(s)	895, 997, 1609
BtsI	GCAGTG	1 cut(s)	723
BtsIMutI	CAGTG	1 cut(s)	723
BveI	ACCTGC	1 cut(s)	799
Cac8I	GCNNGC	3 cut(s)	317, 377, 1093
CfoI	GCGC	4 cut(s)	17, 256, 521, 1548
Cfr10I	RCCGGY	1 cut(s)	786
Cfr13I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
CpoI	CGGWCCG	1 cut(s)	620
CsiI	ACCWGGT	1 cut(s)	1521
Csp6I	GTAC	2 cut(s)	1405, 1414
CspAI	ACCGGT	1 cut(s)	786
CspI	CGGWCCG	1 cut(s)	620
CviAII	CATG	7 cut(s)	160, 244, 298, 685, 938, 1005, 1148
CviQI	GTAC	2 cut(s)	1405, 1414
DdeI	CTNAG	6 cut(s)	281, 332, 371, 717, 984, 1317
DpnI	GATC	2 cut(s)	722, 1047
DpnII	GATC	2 cut(s)	720, 1045
EaeI	YGGCCR	1 cut(s)	313
Eam1104I	CTCTTC	2 cut(s)	44, 443
EarI	CTCTTC	2 cut(s)	44, 443
EciI	GGCGGA	3 cut(s)	89, 588, 722
Eco130I	CCWWGG	2 cut(s)	159, 1652
Eco24I	GRGCYC	1 cut(s)	1259
Eco31I	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
Eco47I	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
Eco72I	CACGTG	1 cut(s)	1618
Eco81I	CCTNAGG	1 cut(s)	281
EcoO109I	RGGNCCY	3 cut(s)	277, 364, 547
EcoRI	GAATTC	1 cut(s)	139
EcoRII	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
EcoT14I	CCWWGG	2 cut(s)	159, 1652
EcoT38I	GRGCYC	1 cut(s)	1259
ErhI	CCWWGG	2 cut(s)	159, 1652
Esp3I	CGTCTC	1 cut(s)	225
FaeI	CATG	7 cut(s)	163, 247, 301, 688, 941, 1008, 1151
FalI	AAGNNNNNCTT	2 cut(s)	936, 968
FaqI	GGGAC	5 cut(s)	350, 479, 1015, 1296, 1501
FatI	CATG	7 cut(s)	159, 243, 297, 684, 937, 1004, 1147
FauI	CCCGC	4 cut(s)	252, 375, 532, 1321
FauNDI	CATATG	1 cut(s)	1563
Fnu4HI	GCNGC	8 cut(s)	13, 35, 257, 421, 522, 864, 1018, 1419
FokI	GGATG	3 cut(s)	902, 1004, 1616
FriOI	GRGCYC	1 cut(s)	1259
Fsp4HI	GCNGC	8 cut(s)	13, 35, 257, 421, 522, 864, 1018, 1419
FspBI	CTAG	4 cut(s)	293, 1092, 1484, 1491
GlaI	GCGC	4 cut(s)	16, 255, 520, 1547
GluI	GCNGC	8 cut(s)	13, 35, 257, 421, 522, 864, 1018, 1419
GsuI	CTGGAG	3 cut(s)	70, 289, 1365
HaeII	RGCGCY	1 cut(s)	18
HaeIII	GGCC	4 cut(s)	315, 350, 506, 656
HapII	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
HhaI	GCGC	4 cut(s)	17, 256, 521, 1548
Hin1II	CATG	7 cut(s)	163, 247, 301, 688, 941, 1008, 1151
Hin6I	GCGC	4 cut(s)	15, 254, 519, 1546
HinP1I	GCGC	4 cut(s)	15, 254, 519, 1546
HincII	GTYRAC	1 cut(s)	822
HindII	GTYRAC	1 cut(s)	822
HindIII	AAGCTT	1 cut(s)	1025
HinfI	GANTC	8 cut(s)	171, 263, 692, 749, 818, 982, 1125, 1321
HpaII	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
Hpy166II	GTNNAC	3 cut(s)	822, 1237, 1367
Hpy188I	TCNGA	9 cut(s)	80, 199, 333, 748, 817, 856, 987, 1050, 1320
Hpy188III	TCNNGA	1 cut(s)	269
Hpy8I	GTNNAC	3 cut(s)	822, 1237, 1367
Hpy99I	CGWCG	3 cut(s)	214, 220, 347
HpyAV	CCTTC	6 cut(s)	55, 577, 640, 902, 1504, 1568
HpyCH4III	ACNGT	3 cut(s)	434, 620, 802
HpyCH4IV	ACGT	1 cut(s)	1617
HpyCH4V	TGCA	7 cut(s)	7, 183, 379, 784, 1288, 1367, 1431
HpyF3I	CTNAG	6 cut(s)	281, 332, 371, 717, 984, 1317
HpySE526I	ACGT	1 cut(s)	1617
Hsp92II	CATG	7 cut(s)	163, 247, 301, 688, 941, 1008, 1151
HspAI	GCGC	4 cut(s)	15, 254, 519, 1546
KflI	GGGWCCC	1 cut(s)	364
Kpn2I	TCCGGA	1 cut(s)	268
Kzo9I	GATC	2 cut(s)	720, 1045
LguI	GCTCTTC	1 cut(s)	44
LmnI	GCTCC	4 cut(s)	119, 308, 354, 413
Lsp1109I	GCAGC	1 cut(s)	1405
LweI	GCATC	2 cut(s)	667, 1150
MabI	ACCWGGT	1 cut(s)	1521
MaeI	CTAG	4 cut(s)	293, 1092, 1484, 1491
MaeII	ACGT	1 cut(s)	1617
MaeIII	GTNAC	5 cut(s)	761, 1242, 1300, 1444, 1634
MalI	GATC	2 cut(s)	722, 1047
MbiI	CCGCTC	3 cut(s)	37, 114, 1316
MboI	GATC	2 cut(s)	720, 1045
MboII	GAAGA	5 cut(s)	31, 40, 88, 259, 460
MhlI	GDGCHC	3 cut(s)	305, 1259, 1369
MluCI	AATT	9 cut(s)	72, 105, 139, 605, 964, 1063, 1085, 1204, 1426
MlyI	GAGTC	3 cut(s)	165, 827, 976
MmeI	TCCRAC	3 cut(s)	258, 1331, 1501
MroI	TCCGGA	1 cut(s)	268
MseI	TTAA	3 cut(s)	849, 1425, 1554
MslI	CAYNNNNRTG	1 cut(s)	387
MspA1I	CMGCKG	1 cut(s)	319
MspI	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
MspR9I	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
MvaI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
MvnI	CGCG	4 cut(s)	256, 521, 539, 1548
NciI	CCSGG	2 cut(s)	551, 697
NcoI	CCATGG	1 cut(s)	159
NdeI	CATATG	1 cut(s)	1563
NdeII	GATC	2 cut(s)	720, 1045
NheI	GCTAGC	1 cut(s)	1091
NlaIII	CATG	7 cut(s)	163, 247, 301, 688, 941, 1008, 1151
NlaIV	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
NmuCI	GTSAC	3 cut(s)	761, 1444, 1634
NspI	RCATGY	2 cut(s)	301, 1008
PciI	ACATGT	1 cut(s)	297
PciSI	GCTCTTC	1 cut(s)	44
PcsI	WCGNNNNNNNCGW	1 cut(s)	212
PfeI	GAWTC	5 cut(s)	263, 692, 749, 1125, 1321
PfoI	TCCNGGA	2 cut(s)	1128, 1590
PinAI	ACCGGT	1 cut(s)	786
PkrI	GCNGC	8 cut(s)	14, 36, 258, 422, 523, 865, 1019, 1420
PleI	GAGTC	3 cut(s)	165, 826, 976
PmaCI	CACGTG	1 cut(s)	1618
PmlI	CACGTG	1 cut(s)	1618
PpsI	GAGTC	3 cut(s)	165, 826, 976
Ppu21I	YACGTR	1 cut(s)	1618
PpuMI	RGGWCCY	3 cut(s)	277, 364, 547
PscI	ACATGT	1 cut(s)	297
Psp5II	RGGWCCY	3 cut(s)	277, 364, 547
Psp6I	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
PspCI	CACGTG	1 cut(s)	1618
PspGI	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
PspN4I	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
PspPI	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
PspPPI	RGGWCCY	3 cut(s)	277, 364, 547
PvuII	CAGCTG	1 cut(s)	319
RsaI	GTAC	2 cut(s)	1406, 1415
RsaNI	GTAC	2 cut(s)	1405, 1414
RseI	CAYNNNNRTG	1 cut(s)	387
Rsr2I	CGGWCCG	1 cut(s)	620
RsrII	CGGWCCG	1 cut(s)	620
SapI	GCTCTTC	1 cut(s)	44
SaqAI	TTAA	3 cut(s)	849, 1425, 1554
SatI	GCNGC	8 cut(s)	13, 35, 257, 421, 522, 864, 1018, 1419
Sau3AI	GATC	2 cut(s)	720, 1045
Sau96I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
SchI	GAGTC	3 cut(s)	165, 827, 976
ScrFI	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
SduI	GDGCHC	3 cut(s)	305, 1259, 1369
SexAI	ACCWGGT	1 cut(s)	1521
SfaNI	GCATC	2 cut(s)	667, 1150
SinI	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
SmiMI	CAYNNNNRTG	1 cut(s)	387
Sse9I	AATT	9 cut(s)	72, 105, 139, 605, 964, 1063, 1085, 1204, 1426
SspMI	CTAG	4 cut(s)	293, 1092, 1484, 1491
StyD4I	CCNGG	7 cut(s)	305, 350, 549, 695, 1128, 1521, 1590
StyI	CCWWGG	2 cut(s)	159, 1652
TaaI	ACNGT	3 cut(s)	434, 620, 802
TaiI	ACGT	1 cut(s)	1620
TaqI	TCGA	7 cut(s)	752, 1038, 1123, 1158, 1224, 1528, 1580
TaqII	GACCGA	1 cut(s)	1073
TasI	AATT	9 cut(s)	72, 105, 139, 605, 964, 1063, 1085, 1204, 1426
TauI	GCSGC	7 cut(s)	15, 37, 259, 423, 524, 866, 1020
TfiI	GAWTC	5 cut(s)	263, 692, 749, 1125, 1321
Tru1I	TTAA	3 cut(s)	849, 1425, 1554
Tru9I	TTAA	3 cut(s)	849, 1425, 1554
TscAI	CASTG	1 cut(s)	730
TseFI	GTSAC	3 cut(s)	761, 1444, 1634
TseI	GCWGC	1 cut(s)	1418
Tsp45I	GTSAC	3 cut(s)	761, 1444, 1634
TspDTI	ATGAA	7 cut(s)	40, 260, 554, 596, 1008, 1108, 1550
TspGWI	ACGGA	1 cut(s)	1525
TspRI	CASTG	1 cut(s)	730
VneI	GTGCAC	1 cut(s)	1365
VpaK11BI	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
XapI	RAATTY	2 cut(s)	139, 1063
XceI	RCATGY	2 cut(s)	301, 1008
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1186
XspI	CTAG	4 cut(s)	293, 1092, 1484, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.