Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0014152

Physical Location & Seq

Genomic Coordinates Reverse (-)

59769378 .. 59772598

Gene Structure 3221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00379340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGAAAATCCCACTCCCCTTACTCTCCCGCCCTTCCCGCCGCGTTTTCCGGCCAATTCTCCACTACCCAAAACCCCAACCGACCCCAATCCCCACTTACAGTTTCTCCATGAACCAAAGATTCAACCTTTGCACTCTGGCCCTCTCTAAAGACCGCCCGCCGGCTCCGGCTCCGCCGCCGCGGCTTTCCAACAAGGCTCTGAAGAAAGCGCGGCGGGAGTCACCGGAGGCGGTGCTGAAGCACAACCTGGACATGTGTTCCCGCCACGGCCAAGTCGTCGAGGCTCTGAGGCTTTACGACGAGGCCAGGAGTAATGGGGTTCCGCTTAGCCTGCACCATTACAATGTGTTGTTGTATTTGTGTTCCTCTGATGGTGAAGATGCTGACGTGGGTTTGAGTAGAGGGTTCGAGATTTTCCGGCAGATGGTAGAGGATAAGGTGGTGCCGAATGAGGCCACGTTTACCAATGCTGCCAGGCTGTCGGCGGCGGCGGCGGACCCAGAAATGGCGTTTAGTTTGGTGAAGCAGATGAAGGTGTTTGGGATTCCGCCGAAGTTGAGGTCTTATGGGCCGGCATTGTTTGGTTTTTGTAAGAAGGGGGAGGCTGAGAGGGCTTATGAAGTTGATGCACACATGGTGGAGTCTGGGGTGGTGGCTGAGGAGCCGGAGATTTCGGCATTGTTGAAGATTAGTTCGGATTTGGGGAAGGGTGAGAAGGTGTATGAGATGATGCAGAGGTTGAGGAGTGGGGTGAGGCAGGTTGGGGAGAGTACTGCTGAGGTGGTTGAGGAGTGGTTTAAGTCTGAGGAGGCGGCGAGAGTTGGGGTGGAGAGGTGGGATGTGAAGAAGGTGAGGGAAGGGGTTGTGAGAGGAGGTGGAGGGTGGCATGGGCAAGGTTGGTTAGGGAGTGGGGAGTGGAAGGTGGTGAGGACTCAGATGGATGAAGCAGGGACGTGCTCCGCTTGCCGCCAGAAGCTTGTGTGTATTGATATTGATCCGAAAGAGACAGAGAACTTTGCTATGTCTTTGAGCAAGCTGGCTAACCAAAGGGAGGTCAGGGCTGATTTTGCTCAGTTCCAGGAGTGGCTTAAGCGACATGGTCCATTTGATGCTATTATAGACGGTGCCAATGTGGGTCTCAGCAATCAACATAATTTCAGCTTTTCTCAGCTGAAAAATGTTGTGAATCGATTACAACAAATGAGTCCGGCAAAGAGATTGCCACTTGTTATATTGCACAAAAGTCGTACGACTAGTGGCCCTGCTCAGAATCCTAGGAACAAGGCATTGTTAGAGACTTGGAAAAAGTCCGGGGCACTTTATGCTACTCCGTCCGGTTCAAATGATGATTGGTACTGGTTGTATGCTGCTGTTAGTTGTAAGGGTTTACTGGTGACAAATGATGAGATGAGAGACCACTTGTTCCAACTTCTTGGAACTAACTTTTTCCCAAGATGGAAGGAAAAACATCAGGTTCGGGTGTCTGTCTCGAGGCTTGGACTAAATCTTCACATGCCACCTCCTTATTCAATTGTAATTCAGGAGTCGGAGGAGGGGCGTTGGCACGTGCCAACCACCACAGGTGATGACATTGAGACCCCAAGGCAGTGGTTGTGTGCCACCAGAGCCAGGGATACAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PPR_long PRORP

Protein Analysis

547

Amino Acids

61.54

Weight (kDa)

9.15

Isoelectric Point (pI)

46.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	68 - 272	2.2e-75	Pentacotripeptide-repeat region of PRORP
PRORP	PF16953	313 - 539	2e-74	Protein-only RNase P
RNase_Zc3h12a	PF11977	372 - 475	1.2e-06	Zc3h12a-like Ribonuclease NYN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32230 AT2G32230
fragaria_vesca	FvH4_4g29971
malus_domestica	MD13G1062300.v1.1 MD16G1060600.v1.1
prunus_persica	Prupe.1G287700_v2.0.a1
pyrus_communis	pycom16g05280
rosa_chinensis	RchiOBHm_Chr4g0438251
rosa_laevigata	RLG00000006377
rosa_multiflora	Rmu_sc0011129.1_g000009
rosa_roxburghii	Rroxscaffold_5G00379340
rosa_rugosa	Rorug04G0308300
rosa_samantha	Rh4AG359400 Rh4BG370200 Rh4DG365300
rosa_wichuraiana	Rw0G006400 Rw0G016340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	748
AccB1I	GGYRCC	2 cut(s)	442, 1124
AccII	CGCG	3 cut(s)	42, 181, 211
AclWI	GGATC	1 cut(s)	989
AcoI	YGGCCR	2 cut(s)	50, 268
AcuI	CTGAAG	2 cut(s)	221, 257
AcvI	CACGTG	1 cut(s)	1567
AdeI	CACNNNGTG	1 cut(s)	637
AfaI	GTAC	3 cut(s)	772, 1249, 1355
AfiI	CCNNNNNNNGG	5 cut(s)	160, 424, 505, 1051, 1629
AflII	CTTAAG	1 cut(s)	1088
AflIII	ACRYGT	1 cut(s)	252
AgsI	TTSAA	4 cut(s)	124, 685, 1341, 1530
AhlI	ACTAGT	1 cut(s)	1253
AjiI	CACGTC	2 cut(s)	388, 954
AjnI	CCWGG	5 cut(s)	246, 305, 473, 1077, 1628
AluBI	AGCT	4 cut(s)	976, 1036, 1161, 1171
AluI	AGCT	4 cut(s)	976, 1036, 1161, 1171
Alw21I	GWGCWC	1 cut(s)	959
Alw26I	GTCTC	6 cut(s)	998, 1142, 1289, 1407, 1492, 1589
AlwI	GGATC	1 cut(s)	989
Ama87I	CYCGRG	1 cut(s)	1489
AoxI	GGCC	7 cut(s)	50, 138, 268, 303, 453, 569, 1258
ApeKI	GCWGC	2 cut(s)	470, 1367
ArsI	GACNNNNNNTTYG	2 cut(s)	545, 577
AspA2I	CCTAGG	1 cut(s)	1274
AspLEI	GCGC	1 cut(s)	211
AspS9I	GGNCC	5 cut(s)	139, 496, 569, 1100, 1259
AsuC2I	CCSGG	1 cut(s)	1312
AsuHPI	GGTGA	9 cut(s)	213, 386, 532, 722, 763, 862, 937, 1405, 1595
AvaI	CYCGRG	1 cut(s)	1489
AvaII	GGWCC	2 cut(s)	496, 1100
AvrII	CCTAGG	1 cut(s)	1274
BaeGI	GKGCMC	1 cut(s)	1318
BanI	GGYRCC	2 cut(s)	442, 1124
BbrPI	CACGTG	1 cut(s)	1567
Bbv12I	GWGCWC	1 cut(s)	959
BbvCI	CCTCAGC	2 cut(s)	657, 777
BbvI	GCAGC	2 cut(s)	457, 1354
BccI	CCATC	4 cut(s)	365, 418, 931, 1449
BceAI	ACGGC	1 cut(s)	283
BcgI	CGANNNNNNTGC	2 cut(s)	1226, 1260
BciT130I	CCWGG	5 cut(s)	248, 307, 475, 1079, 1630
BciVI	GTATCC	1 cut(s)	1627
BcnI	CCSGG	1 cut(s)	1312
BcoDI	GTCTC	6 cut(s)	998, 1142, 1289, 1407, 1492, 1589
BcuI	ACTAGT	1 cut(s)	1253
BfaI	CTAG	2 cut(s)	1254, 1275
BfrI	CTTAAG	1 cut(s)	1088
BfuAI	ACCTGC	1 cut(s)	748
BfuI	GTATCC	1 cut(s)	1627
BglI	GCCNNNNNGGC	1 cut(s)	181
BlnI	CCTAGG	1 cut(s)	1274
BlpI	GCTNAGC	1 cut(s)	326
BmcAI	AGTACT	1 cut(s)	772
Bme1390I	CCNGG	6 cut(s)	248, 307, 475, 1079, 1312, 1630
Bme18I	GGWCC	2 cut(s)	496, 1100
BmeT110I	CYCGRG	1 cut(s)	1489
BmgBI	CACGTC	2 cut(s)	388, 954
BmgT120I	GGNCC	5 cut(s)	139, 496, 569, 1100, 1259
BmiI	GGNNCC	7 cut(s)	165, 171, 321, 444, 498, 663, 1126
BmrFI	CCNGG	6 cut(s)	248, 307, 475, 1079, 1312, 1630
BmsI	GCATC	4 cut(s)	370, 616, 720, 1099
Bpu10I	CCTNAGC	2 cut(s)	657, 777
Bpu1102I	GCTNAGC	1 cut(s)	326
BpuMI	CCSGG	1 cut(s)	1312
Bsa29I	ATCGAT	1 cut(s)	1189
BsaAI	YACGTR	1 cut(s)	1567
BsaBI	GATNNNNATC	1 cut(s)	993
BsaI	GGTCTC	3 cut(s)	1142, 1407, 1589
BsaJI	CCNNGG	6 cut(s)	179, 265, 1274, 1311, 1601, 1629
BsaWI	WCCGGW	2 cut(s)	223, 1334
BsaXI	ACNNNNNCTCC	2 cut(s)	89, 119
Bsc4I	CCNNNNNNNGG	5 cut(s)	160, 424, 505, 1051, 1629
Bse118I	RCCGGY	2 cut(s)	160, 571
Bse1I	ACTGG	2 cut(s)	1361, 1395
Bse8I	GATNNNNATC	1 cut(s)	993
BseBI	CCWGG	5 cut(s)	248, 307, 475, 1079, 1630
BseCI	ATCGAT	1 cut(s)	1189
BseDI	CCNNGG	6 cut(s)	179, 265, 1274, 1311, 1601, 1629
BseGI	GGATG	2 cut(s)	844, 946
BseJI	GATNNNNATC	1 cut(s)	993
BseLI	CCNNNNNNNGG	5 cut(s)	160, 424, 505, 1051, 1629
BseNI	ACTGG	2 cut(s)	1361, 1395
BseRI	GAGGAG	6 cut(s)	674, 757, 803, 821, 885, 1565
BseSI	GKGCMC	1 cut(s)	1318
BseXI	GCAGC	2 cut(s)	457, 1354
BsgI	GTGCAG	1 cut(s)	317
Bsh1236I	CGCG	3 cut(s)	42, 181, 211
BshFI	GGCC	7 cut(s)	52, 140, 270, 305, 455, 571, 1260
BshNI	GGYRCC	2 cut(s)	442, 1124
BshVI	ATCGAT	1 cut(s)	1189
BsiHKAI	GWGCWC	1 cut(s)	959
BsiHKCI	CYCGRG	1 cut(s)	1489
BsiWI	CGTACG	1 cut(s)	1247
BslFI	GGGAC	1 cut(s)	964
BslI	CCNNNNNNNGG	5 cut(s)	160, 424, 505, 1051, 1629
BsmAI	GTCTC	6 cut(s)	998, 1142, 1289, 1407, 1492, 1589
BsmFI	GGGAC	1 cut(s)	964
BsnI	GGCC	7 cut(s)	52, 140, 270, 305, 455, 571, 1260
Bso31I	GGTCTC	3 cut(s)	1142, 1407, 1589
BsoBI	CYCGRG	1 cut(s)	1489
Bsp1286I	GDGCHC	2 cut(s)	959, 1318
Bsp143I	GATC	1 cut(s)	994
Bsp1720I	GCTNAGC	1 cut(s)	326
BspANI	GGCC	7 cut(s)	52, 140, 270, 305, 455, 571, 1260
BspDI	ATCGAT	1 cut(s)	1189
BspFNI	CGCG	3 cut(s)	42, 181, 211
BspLI	GGNNCC	7 cut(s)	165, 171, 321, 444, 498, 663, 1126
BspMI	ACCTGC	1 cut(s)	748
BspPI	GGATC	1 cut(s)	989
BspT107I	GGYRCC	2 cut(s)	442, 1124
BspTI	CTTAAG	1 cut(s)	1088
BspTNI	GGTCTC	3 cut(s)	1142, 1407, 1589
BsrFI	RCCGGY	2 cut(s)	160, 571
BsrI	ACTGG	2 cut(s)	1361, 1395
BssAI	RCCGGY	2 cut(s)	160, 571
BssECI	CCNNGG	6 cut(s)	179, 265, 1274, 1311, 1601, 1629
BssMI	GATC	1 cut(s)	994
BssT1I	CCWWGG	2 cut(s)	1274, 1601
Bst2UI	CCWGG	5 cut(s)	248, 307, 475, 1079, 1630
Bst4CI	ACNGT	2 cut(s)	101, 1124
BstAFI	CTTAAG	1 cut(s)	1088
BstAPI	GCANNNNNTGC	1 cut(s)	1322
BstBAI	YACGTR	1 cut(s)	1567
BstC8I	GCNNGC	7 cut(s)	158, 162, 332, 573, 964, 1034, 1038
BstDSI	CCRYGG	2 cut(s)	179, 265
BstF5I	GGATG	2 cut(s)	844, 946
BstFNI	CGCG	3 cut(s)	42, 181, 211
BstHHI	GCGC	1 cut(s)	211
BstKTI	GATC	1 cut(s)	997
BstMAI	GTCTC	6 cut(s)	998, 1142, 1289, 1407, 1492, 1589
BstMBI	GATC	1 cut(s)	994
BstMWI	GCNNNNNNNGC	9 cut(s)	36, 181, 331, 491, 611, 963, 1067, 1322, 1625
BstNI	CCWGG	5 cut(s)	248, 307, 475, 1079, 1630
BstNSI	RCATGY	2 cut(s)	256, 1516
BstSCI	CCNGG	6 cut(s)	246, 305, 473, 1077, 1310, 1628
BstSLI	GKGCMC	1 cut(s)	1318
BstUI	CGCG	3 cut(s)	42, 181, 211
BstV1I	GCAGC	2 cut(s)	457, 1354
BstXI	CCANNNNNNTGG	2 cut(s)	1433, 1608
Bsu15I	ATCGAT	1 cut(s)	1189
BsuI	GTATCC	1 cut(s)	1627
BsuRI	GGCC	7 cut(s)	52, 140, 270, 305, 455, 571, 1260
BsuTUI	ATCGAT	1 cut(s)	1189
BtgI	CCRYGG	2 cut(s)	179, 265
BtrI	CACGTC	2 cut(s)	388, 954
BtsCI	GGATG	2 cut(s)	844, 946
BtsI	GCAGTG	1 cut(s)	1613
BtsIMutI	CAGTG	1 cut(s)	1613
BveI	ACCTGC	1 cut(s)	748
Cac8I	GCNNGC	7 cut(s)	158, 162, 332, 573, 964, 1034, 1038
CfoI	GCGC	1 cut(s)	211
Cfr10I	RCCGGY	2 cut(s)	160, 571
Cfr13I	GGNCC	5 cut(s)	139, 496, 569, 1100, 1259
Cfr42I	CCGCGG	1 cut(s)	182
ClaI	ATCGAT	1 cut(s)	1189
Csp6I	GTAC	3 cut(s)	771, 1248, 1354
CviAII	CATG	6 cut(s)	109, 253, 634, 887, 1097, 1513
CviQI	GTAC	3 cut(s)	771, 1248, 1354
DpnI	GATC	1 cut(s)	996
DpnII	GATC	1 cut(s)	994
DraIII	CACNNNGTG	1 cut(s)	637
EaeI	YGGCCR	2 cut(s)	50, 268
EciI	GGCGGA	3 cut(s)	162, 509, 537
Eco130I	CCWWGG	2 cut(s)	1274, 1601
Eco31I	GGTCTC	3 cut(s)	1142, 1407, 1589
Eco47I	GGWCC	2 cut(s)	496, 1100
Eco57I	CTGAAG	2 cut(s)	221, 257
Eco72I	CACGTG	1 cut(s)	1567
Eco88I	CYCGRG	1 cut(s)	1489
EcoRII	CCWGG	5 cut(s)	246, 305, 473, 1077, 1628
EcoT14I	CCWWGG	2 cut(s)	1274, 1601
ErhI	CCWWGG	2 cut(s)	1274, 1601
FaeI	CATG	6 cut(s)	112, 256, 637, 890, 1100, 1516
FaqI	GGGAC	1 cut(s)	964
FatI	CATG	6 cut(s)	108, 252, 633, 886, 1096, 1512
FauI	CCCGC	5 cut(s)	35, 44, 165, 207, 269
FokI	GGATG	2 cut(s)	851, 953
FspBI	CTAG	2 cut(s)	1254, 1275
GlaI	GCGC	1 cut(s)	210
HaeIII	GGCC	7 cut(s)	52, 140, 270, 305, 455, 571, 1260
HhaI	GCGC	1 cut(s)	211
Hin1II	CATG	6 cut(s)	112, 256, 637, 890, 1100, 1516
Hin6I	GCGC	1 cut(s)	209
HinP1I	GCGC	1 cut(s)	209
HindIII	AAGCTT	1 cut(s)	974
HinfI	GANTC	9 cut(s)	120, 218, 544, 641, 931, 1186, 1204, 1270, 1544
HphI	GGTGA	9 cut(s)	213, 386, 532, 722, 763, 862, 937, 1405, 1595
Hpy166II	GTNNAC	2 cut(s)	462, 1388
Hpy188I	TCNGA	9 cut(s)	201, 288, 370, 697, 805, 936, 999, 1269, 1549
Hpy188III	TCNNGA	3 cut(s)	409, 1489, 1541
Hpy8I	GTNNAC	2 cut(s)	462, 1388
Hpy99I	CGWCG	2 cut(s)	281, 302
HpyAV	CCTTC	9 cut(s)	42, 526, 589, 700, 709, 841, 851, 913, 1453
HpyCH4III	ACNGT	2 cut(s)	101, 1124
HpyCH4IV	ACGT	4 cut(s)	387, 458, 953, 1566
HpyCH4V	TGCA	5 cut(s)	132, 334, 629, 733, 1237
HpyF10VI	GCNNNNNNNGC	9 cut(s)	36, 181, 331, 491, 611, 963, 1067, 1322, 1625
HpySE526I	ACGT	4 cut(s)	387, 458, 953, 1566
Hsp92II	CATG	6 cut(s)	112, 256, 637, 890, 1100, 1516
HspAI	GCGC	1 cut(s)	209
KroI	GCCGGC	2 cut(s)	160, 571
KroNI	GCCGGC	2 cut(s)	162, 573
KspI	CCGCGG	1 cut(s)	182
Kzo9I	GATC	1 cut(s)	994
LmnI	GCTCC	4 cut(s)	169, 175, 661, 962
Lsp1109I	GCAGC	2 cut(s)	457, 1354
LweI	GCATC	4 cut(s)	370, 616, 720, 1099
MaeI	CTAG	2 cut(s)	1254, 1275
MaeII	ACGT	4 cut(s)	387, 458, 953, 1566
MaeIII	GTNAC	2 cut(s)	219, 1393
MalI	GATC	1 cut(s)	996
MboI	GATC	1 cut(s)	994
MboII	GAAGA	5 cut(s)	214, 389, 697, 856, 1499
MfeI	CAATTG	1 cut(s)	1530
MhlI	GDGCHC	2 cut(s)	959, 1318
MluCI	AATT	4 cut(s)	54, 1153, 1530, 1536
MlyI	GAGTC	5 cut(s)	227, 650, 925, 1213, 1553
MmeI	TCCRAC	3 cut(s)	213, 1450, 1527
MroNI	GCCGGC	2 cut(s)	160, 571
MseI	TTAA	2 cut(s)	798, 1089
MslI	CAYNNNNRTG	1 cut(s)	342
MspA1I	CMGCKG	2 cut(s)	181, 1171
MspCI	CTTAAG	1 cut(s)	1088
MspR9I	CCNGG	6 cut(s)	248, 307, 475, 1079, 1312, 1630
MunI	CAATTG	1 cut(s)	1530
MvaI	CCWGG	5 cut(s)	248, 307, 475, 1079, 1630
MvnI	CGCG	3 cut(s)	42, 181, 211
MwoI	GCNNNNNNNGC	9 cut(s)	36, 181, 331, 491, 611, 963, 1067, 1322, 1625
NaeI	GCCGGC	2 cut(s)	162, 573
NciI	CCSGG	1 cut(s)	1312
NdeII	GATC	1 cut(s)	994
NgoMIV	GCCGGC	2 cut(s)	160, 571
NlaIII	CATG	6 cut(s)	112, 256, 637, 890, 1100, 1516
NlaIV	GGNNCC	7 cut(s)	165, 171, 321, 444, 498, 663, 1126
NmuCI	GTSAC	2 cut(s)	219, 1393
NspI	RCATGY	2 cut(s)	256, 1516
PaeR7I	CTCGAG	1 cut(s)	1489
PciI	ACATGT	1 cut(s)	252
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PdiI	GCCGGC	2 cut(s)	162, 573
PfeI	GAWTC	4 cut(s)	120, 544, 1186, 1270
Pfl23II	CGTACG	1 cut(s)	1247
PflFI	GACNNNGTC	1 cut(s)	1098
PfoI	TCCNGGA	1 cut(s)	1077
PleI	GAGTC	5 cut(s)	226, 649, 925, 1212, 1552
PmaCI	CACGTG	1 cut(s)	1567
PmlI	CACGTG	1 cut(s)	1567
PpsI	GAGTC	5 cut(s)	226, 649, 925, 1212, 1552
Ppu21I	YACGTR	1 cut(s)	1567
PscI	ACATGT	1 cut(s)	252
Psp6I	CCWGG	5 cut(s)	246, 305, 473, 1077, 1628
PspCI	CACGTG	1 cut(s)	1567
PspGI	CCWGG	5 cut(s)	246, 305, 473, 1077, 1628
PspLI	CGTACG	1 cut(s)	1247
PspN4I	GGNNCC	7 cut(s)	165, 171, 321, 444, 498, 663, 1126
PspPI	GGNCC	5 cut(s)	139, 496, 569, 1100, 1259
PsyI	GACNNNGTC	1 cut(s)	1098
PvuII	CAGCTG	1 cut(s)	1171
RsaI	GTAC	3 cut(s)	772, 1249, 1355
RsaNI	GTAC	3 cut(s)	771, 1248, 1354
RseI	CAYNNNNRTG	1 cut(s)	342
SacII	CCGCGG	1 cut(s)	182
SaqAI	TTAA	2 cut(s)	798, 1089
Sau3AI	GATC	1 cut(s)	994
Sau96I	GGNCC	5 cut(s)	139, 496, 569, 1100, 1259
ScaI	AGTACT	1 cut(s)	772
SchI	GAGTC	5 cut(s)	227, 650, 925, 1213, 1553
ScrFI	CCNGG	6 cut(s)	248, 307, 475, 1079, 1312, 1630
SduI	GDGCHC	2 cut(s)	959, 1318
SfaNI	GCATC	4 cut(s)	370, 616, 720, 1099
Sfr274I	CTCGAG	1 cut(s)	1489
Sfr303I	CCGCGG	1 cut(s)	182
SgrBI	CCGCGG	1 cut(s)	182
SinI	GGWCC	2 cut(s)	496, 1100
SlaI	CTCGAG	1 cut(s)	1489
SmiMI	CAYNNNNRTG	1 cut(s)	342
SmlI	CTYRAG	2 cut(s)	1088, 1489
SmoI	CTYRAG	2 cut(s)	1088, 1489
SpeI	ACTAGT	1 cut(s)	1253
Sse9I	AATT	4 cut(s)	54, 1153, 1530, 1536
SspMI	CTAG	2 cut(s)	1254, 1275
StyD4I	CCNGG	6 cut(s)	246, 305, 473, 1077, 1310, 1628
StyI	CCWWGG	2 cut(s)	1274, 1601
TaaI	ACNGT	2 cut(s)	101, 1124
TaiI	ACGT	4 cut(s)	390, 461, 956, 1569
TaqI	TCGA	4 cut(s)	279, 408, 1189, 1490
TasI	AATT	4 cut(s)	54, 1153, 1530, 1536
TatI	WGTACW	1 cut(s)	770
TfiI	GAWTC	4 cut(s)	120, 544, 1186, 1270
Tru1I	TTAA	2 cut(s)	798, 1089
Tru9I	TTAA	2 cut(s)	798, 1089
TscAI	CASTG	1 cut(s)	1613
TseFI	GTSAC	2 cut(s)	219, 1393
TseI	GCWGC	2 cut(s)	470, 1367
Tsp45I	GTSAC	2 cut(s)	219, 1393
TspDTI	ATGAA	5 cut(s)	17, 125, 545, 633, 957
TspGWI	ACGGA	1 cut(s)	1320
TspRI	CASTG	1 cut(s)	1613
Tth111I	GACNNNGTC	1 cut(s)	1098
Vha464I	CTTAAG	1 cut(s)	1088
VpaK11BI	GGWCC	2 cut(s)	496, 1100
XceI	RCATGY	2 cut(s)	256, 1516
XhoI	CTCGAG	1 cut(s)	1489
XmaJI	CCTAGG	1 cut(s)	1274
XspI	CTAG	2 cut(s)	1254, 1275
ZrmI	AGTACT	1 cut(s)	772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.