MD16G1077200.v1.1

Protein of unknown function (DUF4005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0005350
Physical Location & Seq
Reverse (-)
5401940 .. 5406047
4108 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1077200.v1.1.491

Sequence Viewer

Length: 1689 bp
ATGGGAAAAACCCCTGGGAAATGGATCAAGAACTTGCTTCTTGGGAAGAAATCATCCAAGTCTACTTTTTCCAAAGGAAGGGAGAAATCTACAAATAAAGGGGAGTCACTGTTCTCTTCAGAGTTAACTGTGAGTGCTCCGCTGATATCACCAACATTGGTTTCACCACCGCTGATTGAGGCTGTTGCTAGTAATGAAGTGGGTTCTGAGATCACAGTAGCTGAAAAATTGCCCAATGATGGGGTTATAATGTCATCTGCAAAGGAAGAGGGCCAAGCCTTGAGTTCGACTTCTCAGGAAGATCTTGAGACAATCAAGCAAGAGCAAGCTGCCACAAAGGCGCAAAGTGCTTACAGGGGCTATGTGGCTCGACGTGCATATCGGACTCTTAAGGGAATCGTGAGGCTGCAAGCTCTTATTCGTGGTCACTTGGTTAGAAGACAAGCTGTATCCACATTATTCTGTGTCCAGGGGATTGTTAAGTTTCAGGCTCTGATTCGTGGTCAACTTGCTAGACATTCTGATGTTTTGGTTGAGGGTGCTACATGTTTTAATTTATCTGGAGTAAGTGCATATTCACAGGTGGAGAGGCTGTCCAAAATTGTTTTTGTTCAGAAGATTTTGGCTTCATTGGGTACTACTATTCCTCTACGTCTGGAGTATGGTCCAGGGGAACCTAACTCATCCTGGGTGTGGCTTGAGCGCTGGACCAGGTCATGCTTTTGGGAACCTGTTGTACAACCGAAGAAAAACCCTGATTCAAGGTCTCGTAGGAAGCATGAAAAGAGTCAAACAAAAGAAACTGAAAAGGCCAGACCAAAAAGAAGTGTTCAGAGACTGTCCGGTACAAATGTTGAAAATGCTTCAAAACATGTAACCCCTGATTCTGAAAAGACTAAACGCAATTTGAGGAAAGTTTCTAGCCCTTCAGAAGTTGCGAAGGTTAAAAGTAATGTGAGAAAATCTTCTGATTCCAAGAAGGTGGTTTCTGATCGGTCATTAGTTGGTGATGAGAGACCAAAGCACAGTACTGTGAAGAGTTTGGTTTCTGCTGCTCCTGATGATTCGGAGCAAGGCACTAGTGAAATTTCCAAGAAGATGGAACATATGGCAGTTGCTGTGTCAAAACAGTCCGATCTAGAAGGAAGTGTGGAGCTGCCTTCAGCAGATGAACCCATGGAAAAGTTAGATGACCATCCTTCTGGTGACGTGCAACCATTGGAGAACAATGGGACAAGTGAAGAATTTCAAGCAATAAATCAGGAGCCAAACTCGAGGGATCATGTTATCGGGAATGAGGATACGAAAACCAGCCAGAGAAGGGCTTCTCTACCTATGAAGTTTGAACATCAGGAGAATGGTGTTCATAACACACCTATGAAGTTTGAACAGCAGGAGAATGGGGTTCATAACACACCAAGAGTCCCTAGTTATATGGCACCAACTGCCTCAGCAAAAGCTAGGCTGAGAGGACAGGGCTCCCCCAGGTTTGACCAAGACATTGTTGAGAAGAATGTTATTACCAGGCGGCATTCATTGTCTGCTTCCACCAACACTAAGTTAAGTTCTCCTTCCCCACGGGCACATGGACTGGTTCAAGCTGGAAAAGGAGTAATCAGAAGTGACAGATCTTTATTGGCTTCAAGGGATGGTTTTGATAAGGCGATCCAACCAGAGTGGAGGAGGTGA

Protein Analysis

563

Amino Acids

61.99

Weight (kDa)

9.76

Isoelectric Point (pI)

50.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 451 - 540 7.4e-14 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 248
AccB1I GGYRCC 1 cut(s) 1438
AccI GTMKAC 1 cut(s) 62
AciI CCGC 3 cut(s) 140, 170, 1528
AclWI GGATC 3 cut(s) 32, 1287, 1660
AcsI RAATTY 2 cut(s) 1086, 1244
AcuI CTGAAG 3 cut(s) 102, 912, 1146
AfaI GTAC 4 cut(s) 637, 738, 847, 1030
AfeI AGCGCT 1 cut(s) 704
AfiI CCNNNNNNNGG 5 cut(s) 78, 239, 240, 693, 1321
AflII CTTAAG 1 cut(s) 389
AflIII ACRYGT 2 cut(s) 545, 871
AgsI TTSAA 8 cut(s) 762, 857, 867, 1250, 1346, 1388, 1598, 1644
AhlI ACTAGT 1 cut(s) 1079
AjiI CACGTC 2 cut(s) 374, 1210
AjnI CCWGG 7 cut(s) 13, 468, 667, 686, 710, 1484, 1523
AjuI GAANNNNNNNTTGG 2 cut(s) 145, 177
AloI GAACNNNNNNTCC 2 cut(s) 95, 127
AluBI AGCT 7 cut(s) 221, 329, 413, 446, 1156, 1460, 1601
AluI AGCT 7 cut(s) 221, 329, 413, 446, 1156, 1460, 1601
Alw21I GWGCWC 1 cut(s) 139
Alw26I GTCTC 4 cut(s) 302, 771, 829, 1009
AlwI GGATC 3 cut(s) 32, 1287, 1660
AlwNI CAGNNNCTG 4 cut(s) 221, 493, 838, 1118
Ama87I CYCGRG 1 cut(s) 1273
Aor51HI AGCGCT 1 cut(s) 704
AoxI GGCC 2 cut(s) 271, 810
ApeKI GCWGC 4 cut(s) 329, 406, 1052, 1156
ApoI RAATTY 2 cut(s) 1086, 1244
Asp700I GAANNNNTTC 3 cut(s) 964, 1245, 1324
AspLEI GCGC 2 cut(s) 343, 705
AspS9I GGNCC 3 cut(s) 271, 665, 708
AsuHPI GGTGA 4 cut(s) 141, 156, 1019, 1217
AvaI CYCGRG 1 cut(s) 1273
AvaII GGWCC 2 cut(s) 665, 708
BaeGI GKGCMC 1 cut(s) 1585
BaeI ACNNNNGTAYC 2 cut(s) 837, 870
BanI GGYRCC 1 cut(s) 1438
BanII GRGCYC 1 cut(s) 1481
BbsI GAAGAC 1 cut(s) 445
Bbv12I GWGCWC 1 cut(s) 139
BbvCI CCTCAGC 1 cut(s) 1450
BbvI GCAGC 4 cut(s) 316, 393, 1039, 1143
BccI CCATC 4 cut(s) 233, 1093, 1203, 1643
BciT130I CCWGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
BciVI GTATCC 2 cut(s) 460, 1294
BcoDI GTCTC 4 cut(s) 302, 771, 829, 1009
BcuI ACTAGT 1 cut(s) 1079
BfaI CTAG 7 cut(s) 189, 513, 921, 1080, 1139, 1428, 1461
BfoI RGCGCY 1 cut(s) 706
BfrI CTTAAG 1 cut(s) 389
BfuI GTATCC 2 cut(s) 460, 1294
BglI GCCNNNNNGGC 1 cut(s) 338
BglII AGATCT 2 cut(s) 301, 1628
BisI GCNGC 5 cut(s) 330, 407, 1053, 1157, 1529
BlsI GCNGC 5 cut(s) 331, 408, 1054, 1158, 1530
BmcAI AGTACT 1 cut(s) 1030
Bme1390I CCNGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
Bme18I GGWCC 2 cut(s) 665, 708
BmeT110I CYCGRG 1 cut(s) 1273
BmgBI CACGTC 2 cut(s) 374, 1210
BmgT120I GGNCC 3 cut(s) 271, 665, 708
BmiI GGNNCC 5 cut(s) 675, 729, 1266, 1440, 1480
BmrFI CCNGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
BpiI GAAGAC 1 cut(s) 445
BplI GAGNNNNNCTC 2 cut(s) 1256, 1288
BpmI CTGGAG 2 cut(s) 582, 677
Bpu10I CCTNAGC 1 cut(s) 1450
BpuEI CTTGAG 3 cut(s) 301, 326, 719
BsaBI GATNNNNATC 1 cut(s) 1194
BsaI GGTCTC 2 cut(s) 771, 1009
BsaJI CCNNGG 8 cut(s) 13, 14, 469, 668, 687, 1176, 1484, 1577
BsaWI WCCGGW 1 cut(s) 842
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 578, 608
Bsc4I CCNNNNNNNGG 5 cut(s) 78, 239, 240, 693, 1321
Bse1I ACTGG 1 cut(s) 1596
Bse8I GATNNNNATC 1 cut(s) 1194
BseBI CCWGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
BseDI CCNNGG 8 cut(s) 13, 14, 469, 668, 687, 1176, 1484, 1577
BseGI GGATG 4 cut(s) 53, 683, 1195, 1654
BseJI GATNNNNATC 1 cut(s) 1194
BseLI CCNNNNNNNGG 5 cut(s) 78, 239, 240, 693, 1321
BseMII CTCAG 4 cut(s) 198, 308, 1457, 1464
BseNI ACTGG 1 cut(s) 1596
BseSI GKGCMC 1 cut(s) 1585
BseXI GCAGC 4 cut(s) 316, 393, 1039, 1143
BshFI GGCC 2 cut(s) 273, 812
BshNI GGYRCC 1 cut(s) 1438
BsiHKAI GWGCWC 1 cut(s) 139
BsiHKCI CYCGRG 1 cut(s) 1273
BsiSI CCGG 1 cut(s) 843
BslFI GGGAC 2 cut(s) 1246, 1409
BslI CCNNNNNNNGG 5 cut(s) 78, 239, 240, 693, 1321
BsmAI GTCTC 4 cut(s) 302, 771, 829, 1009
BsmFI GGGAC 2 cut(s) 1246, 1409
BsmI GAATGC 1 cut(s) 1531
BsnI GGCC 2 cut(s) 273, 812
Bso31I GGTCTC 2 cut(s) 771, 1009
BsoBI CYCGRG 1 cut(s) 1273
Bsp1286I GDGCHC 3 cut(s) 139, 1481, 1585
Bsp1407I TGTACA 1 cut(s) 736
Bsp143I GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
Bsp19I CCATGG 1 cut(s) 1176
BspACI CCGC 3 cut(s) 140, 170, 1528
BspANI GGCC 2 cut(s) 273, 812
BspCNI CTCAG 4 cut(s) 199, 307, 1458, 1463
BspLI GGNNCC 5 cut(s) 675, 729, 1266, 1440, 1480
BspPI GGATC 3 cut(s) 32, 1287, 1660
BspT107I GGYRCC 1 cut(s) 1438
BspTI CTTAAG 1 cut(s) 389
BspTNI GGTCTC 2 cut(s) 771, 1009
BsrGI TGTACA 1 cut(s) 736
BsrI ACTGG 1 cut(s) 1596
BssECI CCNNGG 8 cut(s) 13, 14, 469, 668, 687, 1176, 1484, 1577
BssMI GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
BssT1I CCWWGG 1 cut(s) 1176
Bst2UI CCWGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
Bst4CI ACNGT 7 cut(s) 111, 130, 217, 840, 1028, 1033, 1131
Bst6I CTCTTC 3 cut(s) 121, 261, 1031
BstAFI CTTAAG 1 cut(s) 389
BstAPI GCANNNNNTGC 1 cut(s) 1445
BstAUI TGTACA 1 cut(s) 736
BstC8I GCNNGC 2 cut(s) 327, 411
BstDEI CTNAG 5 cut(s) 207, 294, 1450, 1466, 1557
BstDSI CCRYGG 2 cut(s) 1176, 1577
BstF5I GGATG 4 cut(s) 53, 683, 1195, 1654
BstH2I RGCGCY 1 cut(s) 706
BstHHI GCGC 2 cut(s) 343, 705
BstKTI GATC 8 cut(s) 27, 213, 304, 994, 1138, 1282, 1631, 1668
BstMAI GTCTC 4 cut(s) 302, 771, 829, 1009
BstMBI GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
BstMWI GCNNNNNNNGC 4 cut(s) 338, 347, 374, 1445
BstNI CCWGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
BstNSI RCATGY 2 cut(s) 549, 875
BstSCI CCNGG 7 cut(s) 13, 468, 667, 686, 710, 1484, 1523
BstSLI GKGCMC 1 cut(s) 1585
BstV1I GCAGC 4 cut(s) 316, 393, 1039, 1143
BstV2I GAAGAC 1 cut(s) 445
BstX2I RGATCY 2 cut(s) 301, 1628
BstXI CCANNNNNNTGG 3 cut(s) 982, 1099, 1202
BstYI RGATCY 2 cut(s) 301, 1628
BsuI GTATCC 2 cut(s) 460, 1294
BsuRI GGCC 2 cut(s) 273, 812
BtgI CCRYGG 2 cut(s) 1176, 1577
BtrI CACGTC 2 cut(s) 374, 1210
BtsCI GGATG 4 cut(s) 53, 683, 1195, 1654
BtsIMutI CAGTG 1 cut(s) 107
Cac8I GCNNGC 2 cut(s) 327, 411
CaiI CAGNNNCTG 4 cut(s) 221, 493, 838, 1118
CfoI GCGC 2 cut(s) 343, 705
Cfr13I GGNCC 3 cut(s) 271, 665, 708
CsiI ACCWGGT 1 cut(s) 710
Csp6I GTAC 4 cut(s) 636, 737, 846, 1029
CspCI CAANNNNNGTGG 1 cut(s) 1658
CviAII CATG 7 cut(s) 546, 717, 779, 872, 1177, 1283, 1586
CviQI GTAC 4 cut(s) 636, 737, 846, 1029
DdeI CTNAG 5 cut(s) 207, 294, 1450, 1466, 1557
DpnI GATC 8 cut(s) 26, 212, 303, 993, 1137, 1281, 1630, 1667
DpnII GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
Eam1104I CTCTTC 3 cut(s) 121, 261, 1031
EarI CTCTTC 3 cut(s) 121, 261, 1031
Eco130I CCWWGG 1 cut(s) 1176
Eco24I GRGCYC 1 cut(s) 1481
Eco31I GGTCTC 2 cut(s) 771, 1009
Eco32I GATATC 1 cut(s) 147
Eco47I GGWCC 2 cut(s) 665, 708
Eco47III AGCGCT 1 cut(s) 704
Eco57I CTGAAG 3 cut(s) 102, 912, 1146
Eco88I CYCGRG 1 cut(s) 1273
EcoRII CCWGG 7 cut(s) 13, 468, 667, 686, 710, 1484, 1523
EcoRV GATATC 1 cut(s) 147
EcoT14I CCWWGG 1 cut(s) 1176
EcoT38I GRGCYC 1 cut(s) 1481
ErhI CCWWGG 1 cut(s) 1176
FaeI CATG 7 cut(s) 549, 720, 782, 875, 1180, 1286, 1589
FalI AAGNNNNNCTT 2 cut(s) 1555, 1587
FaqI GGGAC 2 cut(s) 1246, 1409
FatI CATG 7 cut(s) 545, 716, 778, 871, 1176, 1282, 1585
FauNDI CATATG 1 cut(s) 1107
FblI GTMKAC 1 cut(s) 62
Fnu4HI GCNGC 5 cut(s) 330, 407, 1053, 1157, 1529
FokI GGATG 4 cut(s) 40, 670, 1182, 1661
FriOI GRGCYC 1 cut(s) 1481
Fsp4HI GCNGC 5 cut(s) 330, 407, 1053, 1157, 1529
FspBI CTAG 7 cut(s) 189, 513, 921, 1080, 1139, 1428, 1461
GlaI GCGC 2 cut(s) 342, 704
GluI GCNGC 5 cut(s) 330, 407, 1053, 1157, 1529
GsuI CTGGAG 2 cut(s) 582, 677
HaeII RGCGCY 1 cut(s) 706
HaeIII GGCC 2 cut(s) 273, 812
HapII CCGG 1 cut(s) 843
HhaI GCGC 2 cut(s) 343, 705
Hin1II CATG 7 cut(s) 549, 720, 782, 875, 1180, 1286, 1589
Hin6I GCGC 2 cut(s) 341, 703
HinP1I GCGC 2 cut(s) 341, 703
HincII GTYRAC 2 cut(s) 126, 506
HindII GTYRAC 2 cut(s) 126, 506
HpaI GTTAAC 1 cut(s) 126
HpaII CCGG 1 cut(s) 843
HphI GGTGA 4 cut(s) 141, 156, 1019, 1217
Hpy166II GTNNAC 3 cut(s) 63, 126, 506
Hpy8I GTNNAC 3 cut(s) 63, 126, 506
Hpy99I CGWCG 1 cut(s) 375
HpyAV CCTTC 9 cut(s) 72, 934, 936, 973, 1136, 1170, 1209, 1314, 1581
HpyCH4III ACNGT 7 cut(s) 111, 130, 217, 840, 1028, 1033, 1131
HpyCH4IV ACGT 3 cut(s) 373, 652, 1209
HpyCH4V TGCA 5 cut(s) 260, 377, 409, 572, 1213
HpyF10VI GCNNNNNNNGC 4 cut(s) 338, 347, 374, 1445
HpyF3I CTNAG 5 cut(s) 207, 294, 1450, 1466, 1557
HpySE526I ACGT 3 cut(s) 373, 652, 1209
Hsp92II CATG 7 cut(s) 549, 720, 782, 875, 1180, 1286, 1589
HspAI GCGC 2 cut(s) 341, 703
KspAI GTTAAC 1 cut(s) 126
Kzo9I GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
LmnI GCTCC 6 cut(s) 142, 1060, 1069, 1153, 1264, 1484
Lsp1109I GCAGC 4 cut(s) 316, 393, 1039, 1143
MabI ACCWGGT 1 cut(s) 710
MaeI CTAG 7 cut(s) 189, 513, 921, 1080, 1139, 1428, 1461
MaeII ACGT 3 cut(s) 373, 652, 1209
MaeIII GTNAC 5 cut(s) 105, 425, 874, 1205, 1622
MalI GATC 8 cut(s) 26, 212, 303, 993, 1137, 1281, 1630, 1667
MboI GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
MflI RGATCY 2 cut(s) 301, 1628
MhlI GDGCHC 3 cut(s) 139, 1481, 1585
MluCI AATT 6 cut(s) 227, 553, 600, 904, 1086, 1244
MlyI GAGTC 4 cut(s) 113, 379, 796, 1431
MroXI GAANNNNTTC 3 cut(s) 964, 1245, 1324
MseI TTAA 6 cut(s) 125, 390, 480, 552, 945, 1562
MslI CAYNNNNRTG 2 cut(s) 522, 1376
MspA1I CMGCKG 2 cut(s) 142, 172
MspCI CTTAAG 1 cut(s) 389
MspI CCGG 1 cut(s) 843
MspR9I CCNGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
Mva1269I GAATGC 1 cut(s) 1531
MvaI CCWGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
MwoI GCNNNNNNNGC 4 cut(s) 338, 347, 374, 1445
NcoI CCATGG 1 cut(s) 1176
NdeI CATATG 1 cut(s) 1107
NdeII GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
NlaIII CATG 7 cut(s) 549, 720, 782, 875, 1180, 1286, 1589
NlaIV GGNNCC 5 cut(s) 675, 729, 1266, 1440, 1480
NmuCI GTSAC 4 cut(s) 105, 425, 1205, 1622
NspI RCATGY 2 cut(s) 549, 875
PaeR7I CTCGAG 1 cut(s) 1273
PasI CCCWGGG 1 cut(s) 14
PciI ACATGT 2 cut(s) 545, 871
PctI GAATGC 1 cut(s) 1531
PdmI GAANNNNTTC 3 cut(s) 964, 1245, 1324
PfeI GAWTC 6 cut(s) 396, 496, 758, 884, 971, 1064
PflFI GACNNNGTC 1 cut(s) 712
PkrI GCNGC 5 cut(s) 331, 408, 1054, 1158, 1530
PleI GAGTC 4 cut(s) 112, 379, 795, 1430
PpsI GAGTC 4 cut(s) 112, 379, 795, 1430
PscI ACATGT 2 cut(s) 545, 871
PsiI TTATAA 1 cut(s) 248
Psp6I CCWGG 7 cut(s) 13, 468, 667, 686, 710, 1484, 1523
PspGI CCWGG 7 cut(s) 13, 468, 667, 686, 710, 1484, 1523
PspN4I GGNNCC 5 cut(s) 675, 729, 1266, 1440, 1480
PspPI GGNCC 3 cut(s) 271, 665, 708
PspXI VCTCGAGB 1 cut(s) 1273
PsrI GAACNNNNNNTAC 2 cut(s) 720, 752
PstNI CAGNNNCTG 4 cut(s) 221, 493, 838, 1118
PsuI RGATCY 2 cut(s) 301, 1628
PsyI GACNNNGTC 1 cut(s) 712
RsaI GTAC 4 cut(s) 637, 738, 847, 1030
RsaNI GTAC 4 cut(s) 636, 737, 846, 1029
RseI CAYNNNNRTG 2 cut(s) 522, 1376
SaqAI TTAA 6 cut(s) 125, 390, 480, 552, 945, 1562
SatI GCNGC 5 cut(s) 330, 407, 1053, 1157, 1529
Sau3AI GATC 8 cut(s) 24, 210, 301, 991, 1135, 1279, 1628, 1665
Sau96I GGNCC 3 cut(s) 271, 665, 708
ScaI AGTACT 1 cut(s) 1030
SchI GAGTC 4 cut(s) 113, 379, 796, 1431
ScrFI CCNGG 7 cut(s) 15, 470, 669, 688, 712, 1486, 1525
SduI GDGCHC 3 cut(s) 139, 1481, 1585
SexAI ACCWGGT 1 cut(s) 710
Sfr274I CTCGAG 1 cut(s) 1273
SinI GGWCC 2 cut(s) 665, 708
SlaI CTCGAG 1 cut(s) 1273
SmiMI CAYNNNNRTG 2 cut(s) 522, 1376
SmlI CTYRAG 5 cut(s) 280, 305, 389, 698, 1273
SmoI CTYRAG 5 cut(s) 280, 305, 389, 698, 1273
SpeI ACTAGT 1 cut(s) 1079
Sse9I AATT 6 cut(s) 227, 553, 600, 904, 1086, 1244
SsiI CCGC 3 cut(s) 140, 170, 1528
SspMI CTAG 7 cut(s) 189, 513, 921, 1080, 1139, 1428, 1461
StyD4I CCNGG 7 cut(s) 13, 468, 667, 686, 710, 1484, 1523
StyI CCWWGG 1 cut(s) 1176
TaaI ACNGT 7 cut(s) 111, 130, 217, 840, 1028, 1033, 1131
TaiI ACGT 3 cut(s) 376, 655, 1212
TaqI TCGA 3 cut(s) 287, 370, 1274
TaqII GACCGA 1 cut(s) 984
TasI AATT 6 cut(s) 227, 553, 600, 904, 1086, 1244
TatI WGTACW 2 cut(s) 736, 1028
TauI GCSGC 1 cut(s) 1531
TfiI GAWTC 6 cut(s) 396, 496, 758, 884, 971, 1064
Tru1I TTAA 6 cut(s) 125, 390, 480, 552, 945, 1562
Tru9I TTAA 6 cut(s) 125, 390, 480, 552, 945, 1562
TscAI CASTG 1 cut(s) 114
TseFI GTSAC 4 cut(s) 105, 425, 1205, 1622
TseI GCWGC 4 cut(s) 329, 406, 1052, 1156
Tsp45I GTSAC 4 cut(s) 105, 425, 1205, 1622
TspDTI ATGAA 9 cut(s) 210, 618, 795, 1185, 1352, 1355, 1394, 1397, 1524
TspRI CASTG 1 cut(s) 114
Tth111I GACNNNGTC 1 cut(s) 712
Vha464I CTTAAG 1 cut(s) 389
VpaK11BI GGWCC 2 cut(s) 665, 708
XapI RAATTY 2 cut(s) 1086, 1244
XbaI TCTAGA 1 cut(s) 1138
XceI RCATGY 2 cut(s) 549, 875
XhoI CTCGAG 1 cut(s) 1273
XmiI GTMKAC 1 cut(s) 62
XmnI GAANNNNTTC 3 cut(s) 964, 1245, 1324
XspI CTAG 7 cut(s) 189, 513, 921, 1080, 1139, 1428, 1461
ZrmI AGTACT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.