MD16G1090700.v1.1

carotenoid cleavage dioxygenase 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0012126
Physical Location & Seq
Reverse (-)
6303780 .. 6308189
4410 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1090700.v1.1.491

Sequence Viewer

Length: 1794 bp
ATGGATGCCTTCTCTTCCTCCTTTCTGTCTACGTTTCCCACTCAAAGGATATCAATCTCTCCTGCCATAACATCCCCCAGGCTCAGCAGCATTTCTGCTGTCAGAATTGAAGAAAGACCCATCTCCCAACCACCAGCTTCAAGGCCGCCGCCGCCGCCGCCTCCGAAAAGCACTCCACAGCCTCCGCTAGAGGCGAAGACAGATCGTGCACTTCAAAACAATGCTTCAACTTTCACTGCGGCAAAACAACAAAGTTCTGCGCTACCCGCAGTGATCTTCAACGCTCTGGACGACTTCATCAACAACTTCATAGACCCTCCAGTGAAACCCTCGGTGGACCCCAGGCACGTGCTCTCCTACAACTTTGCTCCGGTTGAGGAACTTCCGCCCACGGAGTGCGAGATCATACAGGGCTCCCTGCCGCCGTGCCTCGACGGAGCCTACATTCGCAATGGCCCGAACCCGCAGTACCTTCCGCGTGGGCCCTACCACCTGTTCGACGGGGACGGAATGCTTCACTCCGTTAGGATCTCTGGAGGCCGGGCGGTGCTCTGCAGCAGATATGTCAAGACCTACAAGTACACCGTTGAGCGCGACGCCGGCCACCCTATTCTTCCCAACGTCTTCTCCGGCTTCAACGGCCTCACCGCTTCCGCTACACGTGGCGCTCTCTCCGCTGCCCGCGTCTTTACAGGCCAATTCAATCCTGCAAATGGCATTGGTCTTGCAAACACAAGTTTGGCCTTCTTCGGCGACCGACTTTACGCTCTCGGCGAGTCCGATCTCCCGTACTCCCTCCGCCTGACGTCCGACGGAGACATCGAGACTCTGGGACGCCATGATTTCGACGGCAAGCTCTCCATGAGCATGACAGCTCATCCGAAGGTAGACCCAGAAACGGGGGAGGCATTCGCCTTCCGCTATGGCCCTATACCGCCGTTTCTAACCTACTTCCGCTTCGACTCGAATGGCGTGAAGCAGCCGGACGTGCCGATATTCTCCATGGTCACTCCATCGTTCCTCCATGACTTTGCAATCACAAAAAAATATGCCATATTTGCTGACATACAAATTGGGATGAACCTTATTGACATGATCACTAAAGGAGCCTCCCCTGTTGGTTTGGACCCTTCCAAAGTGCCGAGGATCGGAGTCATTCCGCGGTACGCGAAGGACGAGTCGGAGATGAGGTGGTTTGAGGTGCCGGGTTTCAACAACGTACATGCTATCAATGCATGGGATGAGGAGGATGCTATTGTGATGGTGGCACCAAACGTTTTGTCAGCAGAACACACAATGGAGAGAATGGAGCTTGTTCATTCTTTGGTTGAGAAGGTTCGGATTGATCTGAAGACGGGGATTGTGACGAGGCAGCCGATTTCAACTAGAAATCTGGATTTCGCCTTGATCAATCCGGCTTACTTGGGGAAGAAGAATCAGTATGTGTATGCAGCTGTGGGTGATCCCATGCCTAAGATATCAGGAGTTGTGAAATTGGATGTGTCTAATTCGGAGCACAAGGAGTCTATTGTGGCCAGCAGGATGTTTGGCCCGGGGTGCTACGGGGGCGAGCCGTTTTTCGTGGCCAGAGAGCCCGAGAATCCGGATGCGGATGAGGACGACGGGTATGTGGTGTCGTATGTTCACGATGAGAAGGCCGGGGAATCGAAGTTCTTGGTGATGGATGCCAAGTCTCCTCAGCTTGACATTGTGGCTGCTGTGAGGATGCCCCGGCGGGTGCCTTATGGCTTCCATGGACTCTTTGTGAAGGAAAGTGATCTCAACAAGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
RPE65

Protein Analysis

598

Amino Acids

65.52

Weight (kDa)

5.78

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 123 - 589 2e-124 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19170
fragaria_vesca FvH4_4g34690
malus_domestica MD13G1090300.v1.1 MD16G1090700.v1.1
prunus_persica Prupe.1G255500_v2.0.a1 Prupe.1G255500_v2.0.a1
pyrus_communis pycom13g07860 pycom16g07750
rosa_chinensis RchiOBHm_Chr4g0444051
rosa_laevigata RLG00000005862
rosa_multiflora Rmu_co8344017.1_g000001 Rmu_sc0015522.1_g000005
rosa_roxburghii Rroxscaffold_5G00384610
rosa_rugosa Rorug04G0349200
rosa_samantha Rh4AG410000 Rh4BG421100 Rh4CG435500 Rh4DG416400
rosa_wichuraiana Rw4G035220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 809
AccB1I GGYRCC 3 cut(s) 1201, 1267, 1738
AccI GTMKAC 2 cut(s) 29, 888
AccII CGCG 5 cut(s) 478, 594, 684, 1162, 1169
AccIII TCCGGA 1 cut(s) 1603
AclI AACGTT 1 cut(s) 1275
AclWI GGATC 3 cut(s) 536, 1154, 1457
AcoI YGGCCR 3 cut(s) 601, 1533, 1584
AcuI CTGAAG 1 cut(s) 1370
AcvI CACGTG 2 cut(s) 349, 662
AcyI GRCGYC 3 cut(s) 597, 806, 835
AdeI CACNNNGTG 1 cut(s) 396
AfaI GTAC 5 cut(s) 470, 581, 791, 1166, 1221
AfiI CCNNNNNNNGG 5 cut(s) 45, 713, 898, 899, 1148
AflIII ACRYGT 1 cut(s) 659
AgsI TTSAA 9 cut(s) 110, 141, 215, 228, 280, 637, 703, 1213, 1383
AjiI CACGTC 1 cut(s) 988
AjnI CCWGG 2 cut(s) 77, 341
AloI GAACNNNNNNTCC 2 cut(s) 1655, 1687
AluBI AGCT 6 cut(s) 137, 856, 875, 1312, 1454, 1702
AluI AGCT 6 cut(s) 137, 856, 875, 1312, 1454, 1702
Alw21I GWGCWC 4 cut(s) 211, 354, 552, 1518
Alw26I GTCTC 3 cut(s) 810, 818, 1698
Alw44I GTGCAC 1 cut(s) 207
AlwI GGATC 3 cut(s) 536, 1154, 1457
Ama87I CYCGRG 2 cut(s) 1552, 1595
Aor13HI TCCGGA 1 cut(s) 1603
ApaI GGGCCC 1 cut(s) 486
ApaLI GTGCAC 1 cut(s) 207
ApeKI GCWGC 7 cut(s) 87, 555, 677, 979, 1372, 1451, 1715
ArsI GACNNNNNNTTYG 4 cut(s) 1163, 1195, 1265, 1297
AspLEI GCGC 3 cut(s) 262, 594, 668
AspS9I GGNCC 7 cut(s) 337, 455, 482, 483, 926, 1126, 1550
AsuC2I CCSGG 6 cut(s) 542, 1206, 1553, 1554, 1660, 1732
AsuHPI GGTGA 3 cut(s) 637, 1472, 1690
AvaI CYCGRG 2 cut(s) 1552, 1595
AvaII GGWCC 2 cut(s) 337, 1126
BaeGI GKGCMC 2 cut(s) 211, 486
BalI TGGCCA 2 cut(s) 1535, 1586
BanI GGYRCC 3 cut(s) 1201, 1267, 1738
BanII GRGCYC 3 cut(s) 416, 486, 1596
BbrPI CACGTG 2 cut(s) 349, 662
BbsI GAAGAC 3 cut(s) 203, 616, 1358
Bbv12I GWGCWC 4 cut(s) 211, 354, 552, 1518
BbvCI CCTCAGC 1 cut(s) 1698
BbvI GCAGC 7 cut(s) 99, 567, 664, 991, 1384, 1463, 1702
BccI CCATC 4 cut(s) 128, 1021, 1255, 1675
BceAI ACGGC 5 cut(s) 409, 655, 865, 922, 1558
BciT130I CCWGG 2 cut(s) 79, 343
BclI TGATCA 2 cut(s) 1095, 1407
BcnI CCSGG 6 cut(s) 542, 1206, 1553, 1554, 1660, 1732
BcoDI GTCTC 3 cut(s) 810, 818, 1698
BfaI CTAG 2 cut(s) 188, 1386
BfmI CTRYAG 1 cut(s) 553
BfoI RGCGCY 1 cut(s) 669
BlpI GCTNAGC 1 cut(s) 83
Bme1390I CCNGG 8 cut(s) 79, 343, 542, 1206, 1553, 1554, 1660, 1732
Bme18I GGWCC 2 cut(s) 337, 1126
BmeT110I CYCGRG 2 cut(s) 1552, 1595
BmgBI CACGTC 1 cut(s) 988
BmgT120I GGNCC 7 cut(s) 337, 455, 482, 483, 926, 1126, 1550
BmiI GGNNCC 9 cut(s) 339, 415, 439, 484, 1108, 1128, 1203, 1269, 1740
BmrFI CCNGG 8 cut(s) 79, 343, 542, 1206, 1553, 1554, 1660, 1732
BmsI GCATC 4 cut(s) 1240, 1597, 1675, 1716
BpiI GAAGAC 3 cut(s) 203, 616, 1358
BpmI CTGGAG 2 cut(s) 303, 555
Bpu10I CCTNAGC 1 cut(s) 1698
Bpu1102I GCTNAGC 1 cut(s) 83
BpuMI CCSGG 6 cut(s) 542, 1206, 1553, 1554, 1660, 1732
BsaAI YACGTR 2 cut(s) 349, 662
BsaBI GATNNNNATC 1 cut(s) 53
BsaHI GRCGYC 3 cut(s) 597, 806, 835
BsaWI WCCGGW 2 cut(s) 370, 1603
BsaXI ACNNNNNCTCC 6 cut(s) 338, 368, 611, 641, 1175, 1205
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 713, 898, 899, 1148
Bse118I RCCGGY 1 cut(s) 599
Bse1I ACTGG 1 cut(s) 320
Bse3DI GCAATG 1 cut(s) 457
Bse8I GATNNNNATC 1 cut(s) 53
BseAI TCCGGA 1 cut(s) 1603
BseBI CCWGG 2 cut(s) 79, 343
BseJI GATNNNNATC 1 cut(s) 53
BseLI CCNNNNNNNGG 5 cut(s) 45, 713, 898, 899, 1148
BseMI GCAATG 1 cut(s) 457
BseMII CTCAG 2 cut(s) 97, 1712
BseNI ACTGG 1 cut(s) 320
BseRI GAGGAG 2 cut(s) 1259, 1686
BseSI GKGCMC 2 cut(s) 211, 486
BseXI GCAGC 7 cut(s) 99, 567, 664, 991, 1384, 1463, 1702
Bsh1236I CGCG 5 cut(s) 478, 594, 684, 1162, 1169
Bsh1285I CGRYCG 1 cut(s) 757
BshNI GGYRCC 3 cut(s) 1201, 1267, 1738
BsiEI CGRYCG 1 cut(s) 757
BsiHKAI GWGCWC 4 cut(s) 211, 354, 552, 1518
BsiHKCI CYCGRG 2 cut(s) 1552, 1595
BslFI GGGAC 2 cut(s) 518, 846
BslI CCNNNNNNNGG 5 cut(s) 45, 713, 898, 899, 1148
BsmAI GTCTC 3 cut(s) 810, 818, 1698
BsmFI GGGAC 2 cut(s) 518, 846
BsmI GAATGC 2 cut(s) 516, 908
BsoBI CYCGRG 2 cut(s) 1552, 1595
Bsp120I GGGCCC 1 cut(s) 482
Bsp1286I GDGCHC 7 cut(s) 211, 354, 416, 486, 552, 1518, 1596
Bsp13I TCCGGA 1 cut(s) 1603
Bsp1720I GCTNAGC 1 cut(s) 83
Bsp19I CCATGG 2 cut(s) 1002, 1753
BspCNI CTCAG 2 cut(s) 96, 1711
BspEI TCCGGA 1 cut(s) 1603
BspFNI CGCG 5 cut(s) 478, 594, 684, 1162, 1169
BspLI GGNNCC 9 cut(s) 339, 415, 439, 484, 1108, 1128, 1203, 1269, 1740
BspMAI CTGCAG 1 cut(s) 557
BspPI GGATC 3 cut(s) 536, 1154, 1457
BspT107I GGYRCC 3 cut(s) 1201, 1267, 1738
BsrDI GCAATG 1 cut(s) 457
BsrFI RCCGGY 1 cut(s) 599
BsrI ACTGG 1 cut(s) 320
BssAI RCCGGY 1 cut(s) 599
BssNI GRCGYC 3 cut(s) 597, 806, 835
BssT1I CCWWGG 2 cut(s) 1002, 1753
Bst2UI CCWGG 2 cut(s) 79, 343
Bst4CI ACNGT 1 cut(s) 586
Bst6I CTCTTC 1 cut(s) 19
BstACI GRCGYC 3 cut(s) 597, 806, 835
BstBAI YACGTR 2 cut(s) 349, 662
BstC8I GCNNGC 5 cut(s) 601, 682, 854, 1537, 1571
BstDEI CTNAG 3 cut(s) 83, 1473, 1698
BstDSI CCRYGG 4 cut(s) 390, 1002, 1160, 1753
BstFNI CGCG 5 cut(s) 478, 594, 684, 1162, 1169
BstH2I RGCGCY 1 cut(s) 669
BstHHI GCGC 3 cut(s) 262, 594, 668
BstMAI GTCTC 3 cut(s) 810, 818, 1698
BstMCI CGRYCG 1 cut(s) 757
BstNI CCWGG 2 cut(s) 79, 343
BstNSI RCATGY 1 cut(s) 1226
BstSCI CCNGG 8 cut(s) 77, 341, 540, 1204, 1551, 1552, 1658, 1730
BstSFI CTRYAG 1 cut(s) 553
BstSLI GKGCMC 2 cut(s) 211, 486
BstUI CGCG 5 cut(s) 478, 594, 684, 1162, 1169
BstV1I GCAGC 7 cut(s) 99, 567, 664, 991, 1384, 1463, 1702
BstV2I GAAGAC 3 cut(s) 203, 616, 1358
BstX2I RGATCY 1 cut(s) 528
BstYI RGATCY 1 cut(s) 528
BtgI CCRYGG 4 cut(s) 390, 1002, 1160, 1753
BtrI CACGTC 1 cut(s) 988
BtsI GCAGTG 2 cut(s) 234, 276
BtsIMutI CAGTG 3 cut(s) 234, 276, 327
Cac8I GCNNGC 5 cut(s) 601, 682, 854, 1537, 1571
CfoI GCGC 3 cut(s) 262, 594, 668
Cfr10I RCCGGY 1 cut(s) 599
Cfr13I GGNCC 7 cut(s) 337, 455, 482, 483, 926, 1126, 1550
Cfr42I CCGCGG 1 cut(s) 1163
Cfr9I CCCGGG 1 cut(s) 1552
CseI GACGC 3 cut(s) 605, 673, 843
Csp6I GTAC 5 cut(s) 469, 580, 790, 1165, 1220
CviQI GTAC 5 cut(s) 469, 580, 790, 1165, 1220
DdeI CTNAG 3 cut(s) 83, 1473, 1698
DraIII CACNNNGTG 1 cut(s) 396
EaeI YGGCCR 3 cut(s) 601, 1533, 1584
Eam1104I CTCTTC 1 cut(s) 19
EarI CTCTTC 1 cut(s) 19
EciI GGCGGA 2 cut(s) 375, 788
Eco130I CCWWGG 2 cut(s) 1002, 1753
Eco24I GRGCYC 3 cut(s) 416, 486, 1596
Eco32I GATATC 2 cut(s) 51, 1479
Eco47I GGWCC 2 cut(s) 337, 1126
Eco57I CTGAAG 1 cut(s) 1370
Eco72I CACGTG 2 cut(s) 349, 662
Eco88I CYCGRG 2 cut(s) 1552, 1595
EcoO109I RGGNCCY 1 cut(s) 483
EcoRII CCWGG 2 cut(s) 77, 341
EcoRV GATATC 2 cut(s) 51, 1479
EcoT14I CCWWGG 2 cut(s) 1002, 1753
EcoT22I ATGCAT 1 cut(s) 1237
EcoT38I GRGCYC 3 cut(s) 416, 486, 1596
ErhI CCWWGG 2 cut(s) 1002, 1753
FaqI GGGAC 2 cut(s) 518, 846
FauI CCCGC 4 cut(s) 274, 471, 689, 1728
FbaI TGATCA 2 cut(s) 1095, 1407
FblI GTMKAC 2 cut(s) 29, 888
FriOI GRGCYC 3 cut(s) 416, 486, 1596
FspBI CTAG 2 cut(s) 188, 1386
GlaI GCGC 3 cut(s) 261, 593, 667
GsuI CTGGAG 2 cut(s) 303, 555
HaeII RGCGCY 1 cut(s) 669
HgaI GACGC 3 cut(s) 605, 673, 843
HhaI GCGC 3 cut(s) 262, 594, 668
Hin1I GRCGYC 3 cut(s) 597, 806, 835
Hin6I GCGC 3 cut(s) 260, 592, 666
HinP1I GCGC 3 cut(s) 260, 592, 666
HphI GGTGA 3 cut(s) 637, 1472, 1690
Hpy166II GTNNAC 6 cut(s) 30, 209, 337, 582, 889, 1645
Hpy188III TCNNGA 8 cut(s) 287, 534, 568, 823, 1394, 1482, 1604, 1646
Hpy8I GTNNAC 6 cut(s) 30, 209, 337, 582, 889, 1645
Hpy99I CGWCG 6 cut(s) 437, 503, 599, 815, 851, 1625
HpyCH4III ACNGT 1 cut(s) 586
HpyCH4IV ACGT 8 cut(s) 32, 348, 621, 661, 806, 987, 1218, 1275
HpyCH4V TGCA 7 cut(s) 209, 555, 710, 728, 1034, 1235, 1451
HpyF3I CTNAG 3 cut(s) 83, 1473, 1698
HpySE526I ACGT 8 cut(s) 32, 348, 621, 661, 806, 987, 1218, 1275
Hsp92I GRCGYC 3 cut(s) 597, 806, 835
HspAI GCGC 3 cut(s) 260, 592, 666
Kpn2I TCCGGA 1 cut(s) 1603
KroI GCCGGC 1 cut(s) 599
KroNI GCCGGC 1 cut(s) 601
Ksp22I TGATCA 2 cut(s) 1095, 1407
KspI CCGCGG 1 cut(s) 1163
LmnI GCTCC 6 cut(s) 373, 419, 437, 1106, 1309, 1513
Lsp1109I GCAGC 7 cut(s) 99, 567, 664, 991, 1384, 1463, 1702
LweI GCATC 4 cut(s) 1240, 1597, 1675, 1716
MaeI CTAG 2 cut(s) 188, 1386
MaeII ACGT 8 cut(s) 32, 348, 621, 661, 806, 987, 1218, 1275
MaeIII GTNAC 2 cut(s) 1006, 1363
MflI RGATCY 1 cut(s) 528
MhlI GDGCHC 7 cut(s) 211, 354, 416, 486, 552, 1518, 1596
MlsI TGGCCA 2 cut(s) 1535, 1586
MluCI AATT 5 cut(s) 105, 698, 1071, 1493, 1507
MluNI TGGCCA 2 cut(s) 1535, 1586
MlyI GAGTC 7 cut(s) 785, 820, 956, 1161, 1187, 1532, 1752
MmeI TCCRAC 2 cut(s) 834, 1161
Mox20I TGGCCA 2 cut(s) 1535, 1586
Mph1103I ATGCAT 1 cut(s) 1237
MroI TCCGGA 1 cut(s) 1603
MroNI GCCGGC 1 cut(s) 599
MscI TGGCCA 2 cut(s) 1535, 1586
MslI CAYNNNNRTG 1 cut(s) 866
Msp20I TGGCCA 2 cut(s) 1535, 1586
MspA1I CMGCKG 3 cut(s) 677, 1162, 1454
MspR9I CCNGG 8 cut(s) 79, 343, 542, 1206, 1553, 1554, 1660, 1732
Mva1269I GAATGC 2 cut(s) 516, 908
MvaI CCWGG 2 cut(s) 79, 343
MvnI CGCG 5 cut(s) 478, 594, 684, 1162, 1169
NaeI GCCGGC 1 cut(s) 601
NciI CCSGG 6 cut(s) 542, 1206, 1553, 1554, 1660, 1732
NcoI CCATGG 2 cut(s) 1002, 1753
NgoMIV GCCGGC 1 cut(s) 599
NlaIV GGNNCC 9 cut(s) 339, 415, 439, 484, 1108, 1128, 1203, 1269, 1740
NmeAIII GCCGAG 2 cut(s) 750, 1167
NmuCI GTSAC 2 cut(s) 1006, 1363
NsiI ATGCAT 1 cut(s) 1237
NspI RCATGY 1 cut(s) 1226
PcsI WCGNNNNNNNCGW 6 cut(s) 288, 771, 777, 819, 1173, 1373
PctI GAATGC 2 cut(s) 516, 908
PdiI GCCGGC 1 cut(s) 601
PfeI GAWTC 3 cut(s) 1435, 1600, 1664
PleI GAGTC 7 cut(s) 784, 820, 956, 1160, 1186, 1531, 1752
PmaCI CACGTG 2 cut(s) 349, 662
PmlI CACGTG 2 cut(s) 349, 662
PpsI GAGTC 7 cut(s) 784, 820, 956, 1160, 1186, 1531, 1752
Ppu21I YACGTR 2 cut(s) 349, 662
Psp1406I AACGTT 1 cut(s) 1275
Psp6I CCWGG 2 cut(s) 77, 341
PspCI CACGTG 2 cut(s) 349, 662
PspGI CCWGG 2 cut(s) 77, 341
PspN4I GGNNCC 9 cut(s) 339, 415, 439, 484, 1108, 1128, 1203, 1269, 1740
PspOMI GGGCCC 1 cut(s) 482
PspPI GGNCC 7 cut(s) 337, 455, 482, 483, 926, 1126, 1550
PsrI GAACNNNNNNTAC 2 cut(s) 452, 484
PstI CTGCAG 1 cut(s) 557
PsuI RGATCY 1 cut(s) 528
PvuII CAGCTG 1 cut(s) 1454
RsaI GTAC 5 cut(s) 470, 581, 791, 1166, 1221
RsaNI GTAC 5 cut(s) 469, 580, 790, 1165, 1220
RseI CAYNNNNRTG 1 cut(s) 866
SacII CCGCGG 1 cut(s) 1163
Sau96I GGNCC 7 cut(s) 337, 455, 482, 483, 926, 1126, 1550
SchI GAGTC 7 cut(s) 785, 820, 956, 1161, 1187, 1532, 1752
ScrFI CCNGG 8 cut(s) 79, 343, 542, 1206, 1553, 1554, 1660, 1732
SduI GDGCHC 7 cut(s) 211, 354, 416, 486, 552, 1518, 1596
SfaNI GCATC 4 cut(s) 1240, 1597, 1675, 1716
SfcI CTRYAG 1 cut(s) 553
Sfr303I CCGCGG 1 cut(s) 1163
SgrBI CCGCGG 1 cut(s) 1163
SinI GGWCC 2 cut(s) 337, 1126
SmaI CCCGGG 1 cut(s) 1554
SmiMI CAYNNNNRTG 1 cut(s) 866
Sse9I AATT 5 cut(s) 105, 698, 1071, 1493, 1507
SspMI CTAG 2 cut(s) 188, 1386
StyD4I CCNGG 8 cut(s) 77, 341, 540, 1204, 1551, 1552, 1658, 1730
StyI CCWWGG 2 cut(s) 1002, 1753
TaaI ACNGT 1 cut(s) 586
TaiI ACGT 8 cut(s) 35, 351, 624, 664, 809, 990, 1221, 1278
TaqI TCGA 7 cut(s) 432, 498, 822, 846, 960, 965, 1667
TaqII GACCGA 1 cut(s) 771
TasI AATT 5 cut(s) 105, 698, 1071, 1493, 1507
TatI WGTACW 1 cut(s) 579
TauI GCSGC 7 cut(s) 148, 151, 154, 157, 160, 242, 424
TfiI GAWTC 3 cut(s) 1435, 1600, 1664
TscAI CASTG 3 cut(s) 241, 276, 327
TseFI GTSAC 2 cut(s) 1006, 1363
TseI GCWGC 7 cut(s) 87, 555, 677, 979, 1372, 1451, 1715
Tsp45I GTSAC 2 cut(s) 1006, 1363
TspDTI ATGAA 4 cut(s) 286, 298, 1094, 1307
TspGWI ACGGA 5 cut(s) 407, 450, 511, 522, 828
TspMI CCCGGG 1 cut(s) 1552
TspRI CASTG 3 cut(s) 241, 276, 327
VneI GTGCAC 1 cut(s) 207
VpaK11BI GGWCC 2 cut(s) 337, 1126
XceI RCATGY 1 cut(s) 1226
XmaI CCCGGG 1 cut(s) 1552
XmiI GTMKAC 2 cut(s) 29, 888
XspI CTAG 2 cut(s) 188, 1386
ZraI GACGTC 1 cut(s) 807
Zsp2I ATGCAT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.