pycom13g07860

carotenoid cleavage dioxygenase 4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0012126
Physical Location & Seq
Reverse (-)
5204414 .. 5208853
4440 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g07860.1

Sequence Viewer

Length: 1455 bp
ATGGATGCCTTCTCTTCCTCCTTCCTATCTGCATTTCCTGCCTTCTCTTCCCCCAAGCTCAGCAGTATTTCCTCTATCAGAATGGAAGAAAGACCCAGCTCCCAACCACCAGCTTCAAGGCCGCCGCCGTCGCAGCAGCCTCCGAGAACCACTCCACCACCGCCGCTAGCGGCAAAAGCCGATCATGCTCTTCAAAACAATGCCTCAACTTTCACTGCGGCAAAACAAACAGTTTCTGCGCTACCCGCAGTGATCTTCAATGCTTTGGACGATTTCATCAACAGCTTCATCGACCCTCCAGTGAAACCCTCAGTGGACCCCAGGCACGTGCTCTCCCACAACTTTGCTCCGGTTGAGGAGCTCCCGCCGACGGAGTGTGAGATCATACACGGCTCCCTGCCGCCGTGCCTCGACGGAGCCTACATTCGCAATGGCCCCAACCCGCAATACCTTCCTCGTGGGCCCTACCACCTGTTCGACGGGGACGGCATGCTGCACTCCGTTAGGATCTCTGGAGGCCGGGCGGTGCTCTGCAGCCGATACGTCAAGACCTACAAGTACACCGTTGAGCGTGACGCCGGCCACCCTATACTTCCCAACGTCTTCTCTGGCTTCAACGGCCTCACCGCTTCCGCCACACGTGGCGCTCTCTTCGCTGCCCGGGTCTTTACAGGCCAATACAATCCTGCAAATGGCATTGGTCTTGCAAACACAAGTTTGGCCTTCTTTGGCGACCGACTTTATGCTCTCGGCGAGTCCGATCTCCCTTACTCCATCCGCCTGACGTCCAACGGAGATATCGAAACTCTGGGACGCCATGATTTCGATGGCAAGCTCTCCATGAACATGACAGCTCATCCCAAGATAGACCCTGACACGGGGGAGGCCTTCGCCTTCCGCTATGGCTTTATACGGCCGTTTCTAACCTACTTCCACTTTGATTCGAATGGCGTGAAGCAGCCGGACGTTCCGATATTCTCCATGGTCACTCCAACGTTCCTCCATGACTTCGCAATCACCAAAAAACATGCCATATTTGCTGACATACAAATTGGGTTGAACCTTATTGACATGATCACTAAACGAGCCTCCCCCGTTGGTTTGGACCCCTCGAAAGTGCCGAGAATTGGAGTGATTCCGCGGTACGCAAAGGACGAGTCGGAGATGAGGTGGTTTGAGGTGCCGGGTTTCAACAGCGTACACGCCACCAATGCATGGGATGAGGACGATGCTATTGTGATGGTGGCACCAAACGTTTTGTCAGCAGAGCACACAATGGAGAGGATGGATCTTGTTCATTCCTTGGTTGAGAAGGTTCGGATTGATCTCAAAACGGGGATTGTGACGAGGCAGCCGATTTCGACCAGAAATCTGGATTTCGCCGTGATCAATCCGGCTTACCTGGGGAGGAAGAATAAGTATGTGTATGTAGCTGTGGATCGATCCCATGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
RPE65

Protein Analysis

485

Amino Acids

53.22

Weight (kDa)

6.76

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 116 - 481 1.7e-89 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19170
fragaria_vesca FvH4_4g34690
malus_domestica MD13G1090300.v1.1 MD16G1090700.v1.1
prunus_persica Prupe.1G255500_v2.0.a1 Prupe.1G255500_v2.0.a1
pyrus_communis pycom13g07860 pycom16g07750
rosa_chinensis RchiOBHm_Chr4g0444051
rosa_laevigata RLG00000005862
rosa_multiflora Rmu_co8344017.1_g000001 Rmu_sc0015522.1_g000005
rosa_roxburghii Rroxscaffold_5G00384610
rosa_rugosa Rorug04G0349200
rosa_samantha Rh4AG410000 Rh4BG421100 Rh4CG435500 Rh4DG416400
rosa_wichuraiana Rw4G035220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 788
AccB1I GGYRCC 2 cut(s) 1180, 1246
AccB7I CCANNNNNTGG 1 cut(s) 1215
AccII CGCG 1 cut(s) 1141
AclI AACGTT 2 cut(s) 995, 1254
AclWI GGATC 4 cut(s) 515, 1296, 1437, 1446
AcoI YGGCCR 2 cut(s) 580, 914
AcvI CACGTG 2 cut(s) 328, 641
AcyI GRCGYC 3 cut(s) 576, 785, 814
AfaI GTAC 3 cut(s) 560, 1145, 1200
AfiI CCNNNNNNNGG 6 cut(s) 370, 692, 877, 878, 1127, 1215
AflIII ACRYGT 1 cut(s) 638
AgsI TTSAA 6 cut(s) 117, 194, 259, 616, 1060, 1192
AjnI CCWGG 2 cut(s) 320, 1401
AluBI AGCT 8 cut(s) 58, 99, 113, 285, 361, 835, 854, 1433
AluI AGCT 8 cut(s) 58, 99, 113, 285, 361, 835, 854, 1433
Alw21I GWGCWC 4 cut(s) 333, 363, 531, 1272
AlwI GGATC 4 cut(s) 515, 1296, 1437, 1446
AlwNI CAGNNNCTG 1 cut(s) 236
Ama87I CYCGRG 1 cut(s) 660
ApaI GGGCCC 1 cut(s) 465
ApeKI GCWGC 7 cut(s) 133, 136, 493, 534, 656, 958, 1351
ArsI GACNNNNNNTTYG 4 cut(s) 1142, 1174, 1244, 1276
AspLEI GCGC 2 cut(s) 241, 647
AspS9I GGNCC 5 cut(s) 316, 434, 461, 462, 1105
AsuC2I CCSGG 4 cut(s) 521, 661, 662, 1185
AsuHPI GGTGA 2 cut(s) 616, 1009
AsuII TTCGAA 1 cut(s) 944
AsuNHI GCTAGC 1 cut(s) 166
AvaI CYCGRG 1 cut(s) 660
AvaII GGWCC 2 cut(s) 316, 1105
BaeGI GKGCMC 1 cut(s) 465
BanI GGYRCC 2 cut(s) 1180, 1246
BanII GRGCYC 2 cut(s) 363, 465
BauI CACGAG 1 cut(s) 456
BbrPI CACGTG 2 cut(s) 328, 641
BbsI GAAGAC 1 cut(s) 595
Bbv12I GWGCWC 4 cut(s) 333, 363, 531, 1272
BbvI GCAGC 7 cut(s) 145, 148, 480, 546, 643, 970, 1363
BccI CCATC 4 cut(s) 782, 821, 1234, 1279
BceAI ACGGC 8 cut(s) 112, 388, 406, 502, 634, 901, 929, 1367
BciT130I CCWGG 2 cut(s) 322, 1403
BclI TGATCA 2 cut(s) 1074, 1386
BcnI CCSGG 4 cut(s) 521, 661, 662, 1185
BfaI CTAG 1 cut(s) 167
BfmI CTRYAG 1 cut(s) 532
BfoI RGCGCY 1 cut(s) 648
BlpI GCTNAGC 1 cut(s) 59
Bme1390I CCNGG 6 cut(s) 322, 521, 661, 662, 1185, 1403
Bme18I GGWCC 2 cut(s) 316, 1105
BmeT110I CYCGRG 1 cut(s) 660
BmgT120I GGNCC 5 cut(s) 316, 434, 461, 462, 1105
BmiI GGNNCC 8 cut(s) 318, 394, 418, 436, 463, 1107, 1182, 1248
BmrFI CCNGG 6 cut(s) 322, 521, 661, 662, 1185, 1403
BmsI GCATC 1 cut(s) 1219
BmtI GCTAGC 1 cut(s) 170
BpiI GAAGAC 1 cut(s) 595
BplI GAGNNNNNCTC 2 cut(s) 136, 168
BpmI CTGGAG 2 cut(s) 282, 534
Bpu1102I GCTNAGC 1 cut(s) 59
Bpu14I TTCGAA 1 cut(s) 944
BpuMI CCSGG 4 cut(s) 521, 661, 662, 1185
Bsa29I ATCGAT 1 cut(s) 1441
BsaAI YACGTR 2 cut(s) 328, 641
BsaHI GRCGYC 3 cut(s) 576, 785, 814
BsaJI CCNNGG 6 cut(s) 320, 660, 981, 1139, 1302, 1402
BsaWI WCCGGW 1 cut(s) 349
BsaXI ACNNNNNCTCC 4 cut(s) 317, 347, 1154, 1184
Bsc4I CCNNNNNNNGG 6 cut(s) 370, 692, 877, 878, 1127, 1215
Bse118I RCCGGY 1 cut(s) 578
Bse1I ACTGG 1 cut(s) 299
Bse3DI GCAATG 1 cut(s) 436
BseBI CCWGG 2 cut(s) 322, 1403
BseCI ATCGAT 1 cut(s) 1441
BseDI CCNNGG 6 cut(s) 320, 660, 981, 1139, 1302, 1402
BseGI GGATG 5 cut(s) 10, 774, 856, 1225, 1290
BseLI CCNNNNNNNGG 6 cut(s) 370, 692, 877, 878, 1127, 1215
BseMI GCAATG 1 cut(s) 436
BseMII CTCAG 2 cut(s) 73, 324
BseNI ACTGG 1 cut(s) 299
BseRI GAGGAG 1 cut(s) 371
BseSI GKGCMC 1 cut(s) 465
BseX3I CGGCCG 1 cut(s) 914
BseXI GCAGC 7 cut(s) 145, 148, 480, 546, 643, 970, 1363
BseYI CCCAGC 1 cut(s) 95
BsgI GTGCAG 1 cut(s) 479
Bsh1236I CGCG 1 cut(s) 1141
Bsh1285I CGRYCG 2 cut(s) 736, 917
BshNI GGYRCC 2 cut(s) 1180, 1246
BshVI ATCGAT 1 cut(s) 1441
BsiEI CGRYCG 2 cut(s) 736, 917
BsiHKAI GWGCWC 4 cut(s) 333, 363, 531, 1272
BsiHKCI CYCGRG 1 cut(s) 660
BsiSI CCGG 7 cut(s) 350, 520, 579, 661, 962, 1184, 1394
BslFI GGGAC 2 cut(s) 497, 825
BslI CCNNNNNNNGG 6 cut(s) 370, 692, 877, 878, 1127, 1215
BsmFI GGGAC 2 cut(s) 497, 825
BsoBI CYCGRG 1 cut(s) 660
Bsp119I TTCGAA 1 cut(s) 944
Bsp120I GGGCCC 1 cut(s) 461
Bsp1286I GDGCHC 5 cut(s) 333, 363, 465, 531, 1272
Bsp1720I GCTNAGC 1 cut(s) 59
Bsp19I CCATGG 1 cut(s) 981
BspCNI CTCAG 2 cut(s) 72, 323
BspDI ATCGAT 1 cut(s) 1441
BspFNI CGCG 1 cut(s) 1141
BspLI GGNNCC 8 cut(s) 318, 394, 418, 436, 463, 1107, 1182, 1248
BspMAI CTGCAG 1 cut(s) 536
BspOI GCTAGC 1 cut(s) 170
BspPI GGATC 4 cut(s) 515, 1296, 1437, 1446
BspQI GCTCTTC 1 cut(s) 195
BspT104I TTCGAA 1 cut(s) 944
BspT107I GGYRCC 2 cut(s) 1180, 1246
BsrDI GCAATG 1 cut(s) 436
BsrFI RCCGGY 1 cut(s) 578
BsrI ACTGG 1 cut(s) 299
BssAI RCCGGY 1 cut(s) 578
BssECI CCNNGG 6 cut(s) 320, 660, 981, 1139, 1302, 1402
BssNI GRCGYC 3 cut(s) 576, 785, 814
BssSI CACGAG 1 cut(s) 456
BssT1I CCWWGG 2 cut(s) 981, 1302
Bst2BI CACGAG 1 cut(s) 456
Bst2UI CCWGG 2 cut(s) 322, 1403
Bst4CI ACNGT 2 cut(s) 232, 565
Bst6I CTCTTC 4 cut(s) 19, 52, 195, 656
BstACI GRCGYC 3 cut(s) 576, 785, 814
BstAPI GCANNNNNTGC 1 cut(s) 38
BstBAI YACGTR 2 cut(s) 328, 641
BstBI TTCGAA 1 cut(s) 944
BstC8I GCNNGC 4 cut(s) 168, 491, 580, 833
BstDEI CTNAG 2 cut(s) 59, 310
BstDSI CCRYGG 2 cut(s) 981, 1139
BstF5I GGATG 5 cut(s) 10, 774, 856, 1225, 1290
BstFNI CGCG 1 cut(s) 1141
BstH2I RGCGCY 1 cut(s) 648
BstHHI GCGC 2 cut(s) 241, 647
BstMCI CGRYCG 2 cut(s) 736, 917
BstNI CCWGG 2 cut(s) 322, 1403
BstNSI RCATGY 2 cut(s) 493, 1031
BstSCI CCNGG 6 cut(s) 320, 519, 659, 660, 1183, 1401
BstSFI CTRYAG 1 cut(s) 532
BstSLI GKGCMC 1 cut(s) 465
BstUI CGCG 1 cut(s) 1141
BstV1I GCAGC 7 cut(s) 145, 148, 480, 546, 643, 970, 1363
BstV2I GAAGAC 1 cut(s) 595
BstX2I RGATCY 2 cut(s) 507, 1288
BstXI CCANNNNNNTGG 1 cut(s) 1372
BstYI RGATCY 2 cut(s) 507, 1288
BstZI CGGCCG 1 cut(s) 914
Bsu15I ATCGAT 1 cut(s) 1441
BsuTUI ATCGAT 1 cut(s) 1441
BtgI CCRYGG 2 cut(s) 981, 1139
BtsCI GGATG 5 cut(s) 10, 774, 856, 1225, 1290
BtsI GCAGTG 2 cut(s) 213, 255
BtsIMutI CAGTG 4 cut(s) 213, 255, 306, 318
Cac8I GCNNGC 4 cut(s) 168, 491, 580, 833
CaiI CAGNNNCTG 1 cut(s) 236
CfoI GCGC 2 cut(s) 241, 647
Cfr10I RCCGGY 1 cut(s) 578
Cfr13I GGNCC 5 cut(s) 316, 434, 461, 462, 1105
Cfr42I CCGCGG 1 cut(s) 1142
Cfr9I CCCGGG 1 cut(s) 660
ClaI ATCGAT 1 cut(s) 1441
CseI GACGC 2 cut(s) 584, 822
Csp6I GTAC 3 cut(s) 559, 1144, 1199
CviQI GTAC 3 cut(s) 559, 1144, 1199
DdeI CTNAG 2 cut(s) 59, 310
EaeI YGGCCR 2 cut(s) 580, 914
EagI CGGCCG 1 cut(s) 914
Eam1104I CTCTTC 4 cut(s) 19, 52, 195, 656
EarI CTCTTC 4 cut(s) 19, 52, 195, 656
EciI GGCGGA 2 cut(s) 622, 767
Ecl136II GAGCTC 1 cut(s) 361
EclXI CGGCCG 1 cut(s) 914
Eco130I CCWWGG 2 cut(s) 981, 1302
Eco147I AGGCCT 1 cut(s) 887
Eco24I GRGCYC 2 cut(s) 363, 465
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 2 cut(s) 316, 1105
Eco52I CGGCCG 1 cut(s) 914
Eco53kI GAGCTC 1 cut(s) 361
Eco72I CACGTG 2 cut(s) 328, 641
Eco88I CYCGRG 1 cut(s) 660
EcoICRI GAGCTC 1 cut(s) 361
EcoO109I RGGNCCY 1 cut(s) 462
EcoRII CCWGG 2 cut(s) 320, 1401
EcoRV GATATC 1 cut(s) 799
EcoT14I CCWWGG 2 cut(s) 981, 1302
EcoT22I ATGCAT 1 cut(s) 1216
EcoT38I GRGCYC 2 cut(s) 363, 465
ErhI CCWWGG 2 cut(s) 981, 1302
FaqI GGGAC 2 cut(s) 497, 825
FauI CCCGC 3 cut(s) 253, 372, 450
FbaI TGATCA 2 cut(s) 1074, 1386
FokI GGATG 5 cut(s) 17, 761, 843, 1232, 1297
FriOI GRGCYC 2 cut(s) 363, 465
FspBI CTAG 1 cut(s) 167
GlaI GCGC 2 cut(s) 240, 646
GsaI CCCAGC 1 cut(s) 99
GsuI CTGGAG 2 cut(s) 282, 534
HaeII RGCGCY 1 cut(s) 648
HapII CCGG 7 cut(s) 350, 520, 579, 661, 962, 1184, 1394
HgaI GACGC 2 cut(s) 584, 822
HhaI GCGC 2 cut(s) 241, 647
Hin1I GRCGYC 3 cut(s) 576, 785, 814
Hin6I GCGC 2 cut(s) 239, 645
HinP1I GCGC 2 cut(s) 239, 645
HinfI GANTC 4 cut(s) 755, 941, 1135, 1157
HpaII CCGG 7 cut(s) 350, 520, 579, 661, 962, 1184, 1394
HphI GGTGA 2 cut(s) 616, 1009
Hpy166II GTNNAC 3 cut(s) 316, 561, 1201
Hpy188I TCNGA 6 cut(s) 80, 144, 760, 972, 1162, 1320
Hpy188III TCNNGA 3 cut(s) 513, 547, 1373
Hpy8I GTNNAC 3 cut(s) 316, 561, 1201
Hpy99I CGWCG 4 cut(s) 133, 373, 416, 482
HpyAV CCTTC 8 cut(s) 19, 31, 52, 461, 733, 898, 904, 1306
HpyCH4III ACNGT 2 cut(s) 232, 565
HpyCH4IV ACGT 8 cut(s) 327, 543, 600, 640, 785, 966, 995, 1254
HpyCH4V TGCA 6 cut(s) 32, 496, 534, 689, 707, 1214
HpyF3I CTNAG 2 cut(s) 59, 310
HpySE526I ACGT 8 cut(s) 327, 543, 600, 640, 785, 966, 995, 1254
Hsp92I GRCGYC 3 cut(s) 576, 785, 814
HspAI GCGC 2 cut(s) 239, 645
KroI GCCGGC 1 cut(s) 578
KroNI GCCGGC 1 cut(s) 580
Ksp22I TGATCA 2 cut(s) 1074, 1386
KspI CCGCGG 1 cut(s) 1142
LguI GCTCTTC 1 cut(s) 195
LmnI GCTCC 6 cut(s) 104, 352, 358, 366, 398, 416
Lsp1109I GCAGC 7 cut(s) 145, 148, 480, 546, 643, 970, 1363
LweI GCATC 1 cut(s) 1219
MaeI CTAG 1 cut(s) 167
MaeII ACGT 8 cut(s) 327, 543, 600, 640, 785, 966, 995, 1254
MaeIII GTNAC 3 cut(s) 572, 985, 1342
MboII GAAGA 8 cut(s) 6, 39, 98, 182, 247, 595, 643, 1423
MflI RGATCY 2 cut(s) 507, 1288
MhlI GDGCHC 5 cut(s) 333, 363, 465, 531, 1272
MluCI AATT 2 cut(s) 1050, 1125
MlyI GAGTC 2 cut(s) 764, 1166
MmeI TCCRAC 3 cut(s) 813, 1016, 1140
Mph1103I ATGCAT 1 cut(s) 1216
MroNI GCCGGC 1 cut(s) 578
MslI CAYNNNNRTG 1 cut(s) 845
MspA1I CMGCKG 1 cut(s) 1141
MspI CCGG 7 cut(s) 350, 520, 579, 661, 962, 1184, 1394
MspR9I CCNGG 6 cut(s) 322, 521, 661, 662, 1185, 1403
MvaI CCWGG 2 cut(s) 322, 1403
MvnI CGCG 1 cut(s) 1141
NaeI GCCGGC 1 cut(s) 580
NciI CCSGG 4 cut(s) 521, 661, 662, 1185
NcoI CCATGG 1 cut(s) 981
NgoMIV GCCGGC 1 cut(s) 578
NheI GCTAGC 1 cut(s) 166
NlaIV GGNNCC 8 cut(s) 318, 394, 418, 436, 463, 1107, 1182, 1248
NmeAIII GCCGAG 2 cut(s) 729, 1146
NmuCI GTSAC 3 cut(s) 572, 985, 1342
NsiI ATGCAT 1 cut(s) 1216
NspI RCATGY 2 cut(s) 493, 1031
NspV TTCGAA 1 cut(s) 944
PaeI GCATGC 1 cut(s) 493
PceI AGGCCT 1 cut(s) 887
PciSI GCTCTTC 1 cut(s) 195
PcsI WCGNNNNNNNCGW 5 cut(s) 756, 798, 1118, 1152, 1352
PdiI GCCGGC 1 cut(s) 580
PfeI GAWTC 2 cut(s) 941, 1135
PflMI CCANNNNNTGG 1 cut(s) 1215
PleI GAGTC 2 cut(s) 763, 1165
PmaCI CACGTG 2 cut(s) 328, 641
PmlI CACGTG 2 cut(s) 328, 641
PpsI GAGTC 2 cut(s) 763, 1165
Ppu21I YACGTR 2 cut(s) 328, 641
Psp124BI GAGCTC 1 cut(s) 363
Psp1406I AACGTT 2 cut(s) 995, 1254
Psp6I CCWGG 2 cut(s) 320, 1401
PspCI CACGTG 2 cut(s) 328, 641
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 2 cut(s) 320, 1401
PspN4I GGNNCC 8 cut(s) 318, 394, 418, 436, 463, 1107, 1182, 1248
PspOMI GGGCCC 1 cut(s) 461
PspPI GGNCC 5 cut(s) 316, 434, 461, 462, 1105
PstI CTGCAG 1 cut(s) 536
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 2 cut(s) 507, 1288
RsaI GTAC 3 cut(s) 560, 1145, 1200
RsaNI GTAC 3 cut(s) 559, 1144, 1199
RseI CAYNNNNRTG 1 cut(s) 845
SacI GAGCTC 1 cut(s) 363
SacII CCGCGG 1 cut(s) 1142
SapI GCTCTTC 1 cut(s) 195
Sau96I GGNCC 5 cut(s) 316, 434, 461, 462, 1105
SchI GAGTC 2 cut(s) 764, 1166
ScrFI CCNGG 6 cut(s) 322, 521, 661, 662, 1185, 1403
SduI GDGCHC 5 cut(s) 333, 363, 465, 531, 1272
SfaNI GCATC 1 cut(s) 1219
SfcI CTRYAG 1 cut(s) 532
Sfr303I CCGCGG 1 cut(s) 1142
SfuI TTCGAA 1 cut(s) 944
SgrBI CCGCGG 1 cut(s) 1142
SinI GGWCC 2 cut(s) 316, 1105
SmaI CCCGGG 1 cut(s) 662
SmiMI CAYNNNNRTG 1 cut(s) 845
SphI GCATGC 1 cut(s) 493
Sse9I AATT 2 cut(s) 1050, 1125
SseBI AGGCCT 1 cut(s) 887
SspMI CTAG 1 cut(s) 167
SstI GAGCTC 1 cut(s) 363
StuI AGGCCT 1 cut(s) 887
StyD4I CCNGG 6 cut(s) 320, 519, 659, 660, 1183, 1401
StyI CCWWGG 2 cut(s) 981, 1302
TaaI ACNGT 2 cut(s) 232, 565
TaiI ACGT 8 cut(s) 330, 546, 603, 643, 788, 969, 998, 1257
TaqI TCGA 9 cut(s) 291, 411, 477, 801, 825, 944, 1112, 1361, 1441
TaqII GACCGA 1 cut(s) 750
TasI AATT 2 cut(s) 1050, 1125
TatI WGTACW 1 cut(s) 558
TauI GCSGC 6 cut(s) 124, 127, 166, 173, 221, 403
TfiI GAWTC 2 cut(s) 941, 1135
TscAI CASTG 4 cut(s) 220, 255, 306, 318
TseFI GTSAC 3 cut(s) 572, 985, 1342
TseI GCWGC 7 cut(s) 133, 136, 493, 534, 656, 958, 1351
Tsp45I GTSAC 3 cut(s) 572, 985, 1342
TspDTI ATGAA 4 cut(s) 265, 277, 857, 1286
TspGWI ACGGA 4 cut(s) 386, 429, 490, 807
TspMI CCCGGG 1 cut(s) 660
TspRI CASTG 4 cut(s) 220, 255, 306, 318
Van91I CCANNNNNTGG 1 cut(s) 1215
VpaK11BI GGWCC 2 cut(s) 316, 1105
XceI RCATGY 2 cut(s) 493, 1031
XcmI CCANNNNNNNNNTGG 1 cut(s) 824
XmaI CCCGGG 1 cut(s) 660
XspI CTAG 1 cut(s) 167
ZraI GACGTC 1 cut(s) 786
Zsp2I ATGCAT 1 cut(s) 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.