30S ribosomal protein S1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G30510 |
| fragaria_vesca | FvH4_4g20780 FvH4_4g20780 |
| malus_domestica | MD13G1147900.v1.1 MD16G1147700.v1.1 |
| prunus_persica | Prupe.1G111400_v2.0.a1 |
| pyrus_communis | pycom16g12610 pycom16g12620 |
| rosa_chinensis | RchiOBHm_Chr4g0426221 |
| rosa_laevigata | RLG00000007309 |
| rosa_multiflora | Rmu_sc0000730.1_g000026 |
| rosa_roxburghii | Rroxscaffold_5G00368240 |
| rosa_rugosa | Rorug04G0209700 |
| rosa_samantha | Rh4AG266600 Rh4BG272600 Rh4CG285800 Rh4DG268900 |
| rosa_wichuraiana | Rw4G023050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 144 |
| AccB1I | GGYRCC | 1 cut(s) | 824 |
| AccBSI | CCGCTC | 2 cut(s) | 46, 1134 |
| AccI | GTMKAC | 1 cut(s) | 532 |
| AccII | CGCG | 2 cut(s) | 58, 128 |
| AclWI | GGATC | 2 cut(s) | 790, 1009 |
| AcsI | RAATTY | 1 cut(s) | 443 |
| AcuI | CTGAAG | 5 cut(s) | 188, 342, 713, 833, 1161 |
| AcyI | GRCGYC | 3 cut(s) | 5, 186, 222 |
| AfaI | GTAC | 2 cut(s) | 205, 266 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 195, 218, 520, 547, 1004, 1133, 1193 |
| AflII | CTTAAG | 1 cut(s) | 31 |
| AgsI | TTSAA | 4 cut(s) | 274, 313, 496, 677 |
| AjnI | CCWGG | 2 cut(s) | 916, 1003 |
| AluBI | AGCT | 9 cut(s) | 166, 470, 480, 492, 538, 545, 772, 1094, 1149 |
| AluI | AGCT | 9 cut(s) | 166, 470, 480, 492, 538, 545, 772, 1094, 1149 |
| Alw26I | GTCTC | 4 cut(s) | 12, 124, 229, 895 |
| AlwI | GGATC | 2 cut(s) | 790, 1009 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 811 |
| AoxI | GGCC | 3 cut(s) | 613, 747, 964 |
| ApoI | RAATTY | 1 cut(s) | 443 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 669 |
| AspLEI | GCGC | 2 cut(s) | 145, 159 |
| AspS9I | GGNCC | 2 cut(s) | 802, 1166 |
| AsuC2I | CCSGG | 2 cut(s) | 102, 429 |
| AsuHPI | GGTGA | 5 cut(s) | 33, 307, 470, 932, 1019 |
| AsuII | TTCGAA | 1 cut(s) | 180 |
| AvaII | GGWCC | 2 cut(s) | 802, 1166 |
| BanI | GGYRCC | 1 cut(s) | 824 |
| BauI | CACGAG | 1 cut(s) | 1101 |
| BbsI | GAAGAC | 3 cut(s) | 189, 348, 848 |
| BbvCI | CCTCAGC | 2 cut(s) | 546, 1145 |
| BccI | CCATC | 2 cut(s) | 122, 509 |
| BceAI | ACGGC | 1 cut(s) | 951 |
| BciT130I | CCWGG | 2 cut(s) | 918, 1005 |
| BcnI | CCSGG | 2 cut(s) | 102, 429 |
| BcoDI | GTCTC | 4 cut(s) | 12, 124, 229, 895 |
| BfaI | CTAG | 1 cut(s) | 723 |
| BfoI | RGCGCY | 1 cut(s) | 160 |
| BfrI | CTTAAG | 1 cut(s) | 31 |
| BglII | AGATCT | 1 cut(s) | 667 |
| BisI | GCNGC | 2 cut(s) | 59, 126 |
| BlpI | GCTNAGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 2 cut(s) | 60, 127 |
| Bme1390I | CCNGG | 4 cut(s) | 102, 429, 918, 1005 |
| Bme18I | GGWCC | 2 cut(s) | 802, 1166 |
| BmgT120I | GGNCC | 2 cut(s) | 802, 1166 |
| BmiI | GGNNCC | 2 cut(s) | 826, 1167 |
| BmrFI | CCNGG | 4 cut(s) | 102, 429, 918, 1005 |
| BmsI | GCATC | 1 cut(s) | 26 |
| BpiI | GAAGAC | 3 cut(s) | 189, 348, 848 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1066, 1098 |
| Bpu10I | CCTNAGC | 2 cut(s) | 546, 1145 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 15 |
| Bpu14I | TTCGAA | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 5 cut(s) | 146, 278, 508, 914, 1068 |
| BpuMI | CCSGG | 2 cut(s) | 102, 429 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 186, 222 |
| BsaJI | CCNNGG | 3 cut(s) | 126, 213, 750 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 321, 351 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 195, 218, 520, 547, 1004, 1133, 1193 |
| Bse1I | ACTGG | 2 cut(s) | 505, 1187 |
| BseBI | CCWGG | 2 cut(s) | 918, 1005 |
| BseDI | CCNNGG | 3 cut(s) | 126, 213, 750 |
| BseGI | GGATG | 2 cut(s) | 501, 556 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 195, 218, 520, 547, 1004, 1133, 1193 |
| BseMII | CTCAG | 6 cut(s) | 29, 270, 537, 748, 906, 1159 |
| BseNI | ACTGG | 2 cut(s) | 505, 1187 |
| Bsh1236I | CGCG | 2 cut(s) | 58, 128 |
| BshFI | GGCC | 3 cut(s) | 615, 749, 966 |
| BshNI | GGYRCC | 1 cut(s) | 824 |
| BsiSI | CCGG | 3 cut(s) | 101, 429, 1220 |
| BslFI | GGGAC | 2 cut(s) | 66, 316 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 195, 218, 520, 547, 1004, 1133, 1193 |
| BsmAI | GTCTC | 4 cut(s) | 12, 124, 229, 895 |
| BsmBI | CGTCTC | 3 cut(s) | 12, 124, 229 |
| BsmFI | GGGAC | 2 cut(s) | 66, 316 |
| BsmI | GAATGC | 2 cut(s) | 145, 387 |
| BsnI | GGCC | 3 cut(s) | 615, 749, 966 |
| Bsp119I | TTCGAA | 1 cut(s) | 180 |
| Bsp143I | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 15 |
| Bsp19I | CCATGG | 2 cut(s) | 213, 750 |
| BspANI | GGCC | 3 cut(s) | 615, 749, 966 |
| BspCNI | CTCAG | 6 cut(s) | 28, 271, 538, 747, 905, 1158 |
| BspFNI | CGCG | 2 cut(s) | 58, 128 |
| BspHI | TCATGA | 2 cut(s) | 880, 936 |
| BspLI | GGNNCC | 2 cut(s) | 826, 1167 |
| BspPI | GGATC | 2 cut(s) | 790, 1009 |
| BspT104I | TTCGAA | 1 cut(s) | 180 |
| BspT107I | GGYRCC | 1 cut(s) | 824 |
| BspTI | CTTAAG | 1 cut(s) | 31 |
| BsrBI | CCGCTC | 2 cut(s) | 46, 1134 |
| BsrI | ACTGG | 2 cut(s) | 505, 1187 |
| BssECI | CCNNGG | 3 cut(s) | 126, 213, 750 |
| BssMI | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| BssNI | GRCGYC | 3 cut(s) | 5, 186, 222 |
| BssSI | CACGAG | 1 cut(s) | 1101 |
| BssT1I | CCWWGG | 2 cut(s) | 213, 750 |
| Bst2BI | CACGAG | 1 cut(s) | 1101 |
| Bst2UI | CCWGG | 2 cut(s) | 918, 1005 |
| Bst4CI | ACNGT | 6 cut(s) | 198, 307, 720, 802, 907, 956 |
| BstACI | GRCGYC | 3 cut(s) | 5, 186, 222 |
| BstAFI | CTTAAG | 1 cut(s) | 31 |
| BstBI | TTCGAA | 1 cut(s) | 180 |
| BstC8I | GCNNGC | 1 cut(s) | 385 |
| BstDEI | CTNAG | 8 cut(s) | 15, 279, 291, 546, 617, 734, 892, 1145 |
| BstDSI | CCRYGG | 3 cut(s) | 126, 213, 750 |
| BstF5I | GGATG | 2 cut(s) | 501, 556 |
| BstFNI | CGCG | 2 cut(s) | 58, 128 |
| BstH2I | RGCGCY | 1 cut(s) | 160 |
| BstHHI | GCGC | 2 cut(s) | 145, 159 |
| BstKTI | GATC | 5 cut(s) | 486, 670, 785, 876, 1017 |
| BstMAI | GTCTC | 4 cut(s) | 12, 124, 229, 895 |
| BstMBI | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 36, 67, 106, 163 |
| BstNI | CCWGG | 2 cut(s) | 918, 1005 |
| BstNSI | RCATGY | 2 cut(s) | 387, 1114 |
| BstSCI | CCNGG | 4 cut(s) | 100, 427, 916, 1003 |
| BstUI | CGCG | 2 cut(s) | 58, 128 |
| BstV2I | GAAGAC | 3 cut(s) | 189, 348, 848 |
| BstX2I | RGATCY | 1 cut(s) | 667 |
| BstYI | RGATCY | 1 cut(s) | 667 |
| BsuRI | GGCC | 3 cut(s) | 615, 749, 966 |
| BtgI | CCRYGG | 3 cut(s) | 126, 213, 750 |
| BtgZI | GCGATG | 1 cut(s) | 1224 |
| BtsCI | GGATG | 2 cut(s) | 501, 556 |
| Cac8I | GCNNGC | 1 cut(s) | 385 |
| CaiI | CAGNNNCTG | 1 cut(s) | 811 |
| CciI | TCATGA | 2 cut(s) | 880, 936 |
| CfoI | GCGC | 2 cut(s) | 145, 159 |
| Cfr13I | GGNCC | 2 cut(s) | 802, 1166 |
| Cfr42I | CCGCGG | 1 cut(s) | 129 |
| CseI | GACGC | 2 cut(s) | 194, 211 |
| CsiI | ACCWGGT | 1 cut(s) | 916 |
| Csp6I | GTAC | 2 cut(s) | 204, 265 |
| CviAII | CATG | 9 cut(s) | 214, 384, 751, 863, 881, 937, 950, 1012, 1111 |
| CviQI | GTAC | 2 cut(s) | 204, 265 |
| DdeI | CTNAG | 8 cut(s) | 15, 279, 291, 546, 617, 734, 892, 1145 |
| DpnI | GATC | 5 cut(s) | 485, 669, 784, 875, 1016 |
| DpnII | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| EciI | GGCGGA | 2 cut(s) | 112, 1061 |
| Eco130I | CCWWGG | 2 cut(s) | 213, 750 |
| Eco147I | AGGCCT | 1 cut(s) | 615 |
| Eco32I | GATATC | 1 cut(s) | 645 |
| Eco47I | GGWCC | 2 cut(s) | 802, 1166 |
| Eco57I | CTGAAG | 5 cut(s) | 188, 342, 713, 833, 1161 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1166 |
| EcoRII | CCWGG | 2 cut(s) | 916, 1003 |
| EcoRV | GATATC | 1 cut(s) | 645 |
| EcoT14I | CCWWGG | 2 cut(s) | 213, 750 |
| EcoT22I | ATGCAT | 1 cut(s) | 389 |
| ErhI | CCWWGG | 2 cut(s) | 213, 750 |
| Esp3I | CGTCTC | 3 cut(s) | 12, 124, 229 |
| FaeI | CATG | 9 cut(s) | 217, 387, 754, 866, 884, 940, 953, 1015, 1114 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 161, 193, 254, 286, 657, 689, 756, 788 |
| FaqI | GGGAC | 2 cut(s) | 66, 316 |
| FatI | CATG | 9 cut(s) | 213, 383, 750, 862, 880, 936, 949, 1011, 1110 |
| FauNDI | CATATG | 1 cut(s) | 820 |
| FblI | GTMKAC | 1 cut(s) | 532 |
| Fnu4HI | GCNGC | 2 cut(s) | 59, 126 |
| FokI | GGATG | 2 cut(s) | 488, 563 |
| Fsp4HI | GCNGC | 2 cut(s) | 59, 126 |
| FspBI | CTAG | 1 cut(s) | 723 |
| FspI | TGCGCA | 1 cut(s) | 144 |
| GlaI | GCGC | 2 cut(s) | 144, 158 |
| GluI | GCNGC | 2 cut(s) | 59, 126 |
| HaeII | RGCGCY | 1 cut(s) | 160 |
| HaeIII | GGCC | 3 cut(s) | 615, 749, 966 |
| HapII | CCGG | 3 cut(s) | 101, 429, 1220 |
| HgaI | GACGC | 2 cut(s) | 194, 211 |
| HhaI | GCGC | 2 cut(s) | 145, 159 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 186, 222 |
| Hin1II | CATG | 9 cut(s) | 217, 387, 754, 866, 884, 940, 953, 1015, 1114 |
| Hin6I | GCGC | 2 cut(s) | 143, 157 |
| HinP1I | GCGC | 2 cut(s) | 143, 157 |
| HincII | GTYRAC | 1 cut(s) | 340 |
| HindII | GTYRAC | 1 cut(s) | 340 |
| HinfI | GANTC | 5 cut(s) | 239, 685, 846, 888, 1158 |
| HpaII | CCGG | 3 cut(s) | 101, 429, 1220 |
| HphI | GGTGA | 5 cut(s) | 33, 307, 470, 932, 1019 |
| Hpy166II | GTNNAC | 2 cut(s) | 340, 533 |
| Hpy188I | TCNGA | 5 cut(s) | 280, 693, 895, 1153, 1180 |
| Hpy8I | GTNNAC | 2 cut(s) | 340, 533 |
| Hpy99I | CGWCG | 1 cut(s) | 1157 |
| HpyAV | CCTTC | 4 cut(s) | 163, 212, 605, 1036 |
| HpyCH4III | ACNGT | 6 cut(s) | 198, 307, 720, 802, 907, 956 |
| HpyCH4V | TGCA | 4 cut(s) | 350, 376, 387, 902 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 36, 67, 106, 163 |
| HpyF3I | CTNAG | 8 cut(s) | 15, 279, 291, 546, 617, 734, 892, 1145 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 186, 222 |
| Hsp92II | CATG | 9 cut(s) | 217, 387, 754, 866, 884, 940, 953, 1015, 1114 |
| HspAI | GCGC | 2 cut(s) | 143, 157 |
| KspI | CCGCGG | 1 cut(s) | 129 |
| Kzo9I | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| LmnI | GCTCC | 5 cut(s) | 114, 329, 543, 1119, 1154 |
| LweI | GCATC | 1 cut(s) | 26 |
| MabI | ACCWGGT | 1 cut(s) | 916 |
| MaeI | CTAG | 1 cut(s) | 723 |
| MaeIII | GTNAC | 4 cut(s) | 737, 920, 1007, 1228 |
| MalI | GATC | 5 cut(s) | 485, 669, 784, 875, 1016 |
| MbiI | CCGCTC | 2 cut(s) | 46, 1134 |
| MboI | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| MboII | GAAGA | 9 cut(s) | 169, 194, 348, 422, 662, 677, 725, 848, 851 |
| MflI | RGATCY | 1 cut(s) | 667 |
| MluCI | AATT | 5 cut(s) | 20, 274, 443, 777, 1077 |
| MlyI | GAGTC | 2 cut(s) | 233, 897 |
| MmeI | TCCRAC | 3 cut(s) | 937, 1147, 1176 |
| Mph1103I | ATGCAT | 1 cut(s) | 389 |
| MroXI | GAANNNNTTC | 1 cut(s) | 669 |
| MseI | TTAA | 2 cut(s) | 32, 1139 |
| MslI | CAYNNNNRTG | 1 cut(s) | 954 |
| MspA1I | CMGCKG | 1 cut(s) | 128 |
| MspCI | CTTAAG | 1 cut(s) | 31 |
| MspI | CCGG | 3 cut(s) | 101, 429, 1220 |
| MspR9I | CCNGG | 4 cut(s) | 102, 429, 918, 1005 |
| Mva1269I | GAATGC | 2 cut(s) | 145, 387 |
| MvaI | CCWGG | 2 cut(s) | 918, 1005 |
| MvnI | CGCG | 2 cut(s) | 58, 128 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 36, 67, 106, 163 |
| NciI | CCSGG | 2 cut(s) | 102, 429 |
| NcoI | CCATGG | 2 cut(s) | 213, 750 |
| NdeI | CATATG | 1 cut(s) | 820 |
| NdeII | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| NlaIII | CATG | 9 cut(s) | 217, 387, 754, 866, 884, 940, 953, 1015, 1114 |
| NlaIV | GGNNCC | 2 cut(s) | 826, 1167 |
| NmuCI | GTSAC | 3 cut(s) | 920, 1007, 1228 |
| NsbI | TGCGCA | 1 cut(s) | 144 |
| NsiI | ATGCAT | 1 cut(s) | 389 |
| NspI | RCATGY | 2 cut(s) | 387, 1114 |
| NspV | TTCGAA | 1 cut(s) | 180 |
| PaeI | GCATGC | 1 cut(s) | 387 |
| PagI | TCATGA | 2 cut(s) | 880, 936 |
| PceI | AGGCCT | 1 cut(s) | 615 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 62 |
| PctI | GAATGC | 2 cut(s) | 145, 387 |
| PdmI | GAANNNNTTC | 1 cut(s) | 669 |
| PfeI | GAWTC | 3 cut(s) | 685, 846, 1158 |
| PflFI | GACNNNGTC | 1 cut(s) | 887 |
| PfoI | TCCNGGA | 1 cut(s) | 427 |
| PkrI | GCNGC | 2 cut(s) | 60, 127 |
| PleI | GAGTC | 2 cut(s) | 233, 896 |
| PpsI | GAGTC | 2 cut(s) | 233, 896 |
| PpuMI | RGGWCCY | 1 cut(s) | 1166 |
| Psp5II | RGGWCCY | 1 cut(s) | 1166 |
| Psp6I | CCWGG | 2 cut(s) | 916, 1003 |
| PspGI | CCWGG | 2 cut(s) | 916, 1003 |
| PspN4I | GGNNCC | 2 cut(s) | 826, 1167 |
| PspPI | GGNCC | 2 cut(s) | 802, 1166 |
| PspPPI | RGGWCCY | 1 cut(s) | 1166 |
| PstNI | CAGNNNCTG | 1 cut(s) | 811 |
| PsuI | RGATCY | 1 cut(s) | 667 |
| PsyI | GACNNNGTC | 1 cut(s) | 887 |
| RsaI | GTAC | 2 cut(s) | 205, 266 |
| RsaNI | GTAC | 2 cut(s) | 204, 265 |
| RseI | CAYNNNNRTG | 1 cut(s) | 954 |
| SacII | CCGCGG | 1 cut(s) | 129 |
| SaqAI | TTAA | 2 cut(s) | 32, 1139 |
| SatI | GCNGC | 2 cut(s) | 59, 126 |
| Sau3AI | GATC | 5 cut(s) | 483, 667, 782, 873, 1014 |
| Sau96I | GGNCC | 2 cut(s) | 802, 1166 |
| SchI | GAGTC | 2 cut(s) | 233, 897 |
| ScrFI | CCNGG | 4 cut(s) | 102, 429, 918, 1005 |
| SexAI | ACCWGGT | 1 cut(s) | 916 |
| SfaNI | GCATC | 1 cut(s) | 26 |
| Sfr303I | CCGCGG | 1 cut(s) | 129 |
| SfuI | TTCGAA | 1 cut(s) | 180 |
| SgrBI | CCGCGG | 1 cut(s) | 129 |
| SinI | GGWCC | 2 cut(s) | 802, 1166 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 954 |
| SmlI | CTYRAG | 6 cut(s) | 31, 161, 257, 487, 929, 1083 |
| SmoI | CTYRAG | 6 cut(s) | 31, 161, 257, 487, 929, 1083 |
| SphI | GCATGC | 1 cut(s) | 387 |
| Sse9I | AATT | 5 cut(s) | 20, 274, 443, 777, 1077 |
| SseBI | AGGCCT | 1 cut(s) | 615 |
| SspMI | CTAG | 1 cut(s) | 723 |
| StuI | AGGCCT | 1 cut(s) | 615 |
| StyD4I | CCNGG | 4 cut(s) | 100, 427, 916, 1003 |
| StyI | CCWWGG | 2 cut(s) | 213, 750 |
| TaaI | ACNGT | 6 cut(s) | 198, 307, 720, 802, 907, 956 |
| TaqI | TCGA | 6 cut(s) | 65, 137, 180, 237, 834, 1038 |
| TaqII | GACCGA | 1 cut(s) | 900 |
| TasI | AATT | 5 cut(s) | 20, 274, 443, 777, 1077 |
| TauI | GCSGC | 2 cut(s) | 61, 128 |
| TfiI | GAWTC | 3 cut(s) | 685, 846, 1158 |
| Tru1I | TTAA | 2 cut(s) | 32, 1139 |
| Tru9I | TTAA | 2 cut(s) | 32, 1139 |
| TseFI | GTSAC | 3 cut(s) | 920, 1007, 1228 |
| Tsp45I | GTSAC | 3 cut(s) | 920, 1007, 1228 |
| TspDTI | ATGAA | 3 cut(s) | 480, 726, 851 |
| TspGWI | ACGGA | 3 cut(s) | 68, 1106, 1170 |
| Tth111I | GACNNNGTC | 1 cut(s) | 887 |
| Vha464I | CTTAAG | 1 cut(s) | 31 |
| VpaK11BI | GGWCC | 2 cut(s) | 802, 1166 |
| XapI | RAATTY | 1 cut(s) | 443 |
| XceI | RCATGY | 2 cut(s) | 387, 1114 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 770 |
| XmiI | GTMKAC | 1 cut(s) | 532 |
| XmnI | GAANNNNTTC | 1 cut(s) | 669 |
| XspI | CTAG | 1 cut(s) | 723 |
| Zsp2I | ATGCAT | 1 cut(s) | 389 |