MD16G1181800.v1.1

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
15589266 .. 15594723
5458 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1181800.v1.1.491

Sequence Viewer

Length: 1695 bp
ATGCAGCCGGATCAAAGAAAAAAGTCCTCTGCAGATGTGGACTTCTTCACAGAATATGGTGAGGGTAGTAGGTATAAAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGCGTTGTTTGCTCTGCATATGATACACATACTGGAGAAAAGGTTGCGATAAAGAAAATCAATGATATTTTTGAACATGTATCAGATGCCACTCGCATTCTTCGCGAGATTAAACTTCTTAGGCTCCTACGCCATCCAGACATTGTGGAGATCAAGCACATCTTGTTACCACCATCCAGAAGGGAATTCAAGGACATTTATGTTGTGTTTGAACTCATGGAATCTGATTTGCACCAGGTTATTAAAGCAAATGACGATTTGACACCAGAACATTATCAGTTCTTTCTTTATCAGCTTCTTCGAGGCATGAAGTACATACACACAGCAAATGTCTTTCACCGAGATCTAAAACCCAAAAATATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTTGCAAGAGTAGCTTTCAATGATACTCCTACAGCTATATTCTGGACGGACTATGTTGCCACAAGATGGTACAGGGCCCCTGAATTGTGTGGATCATTTTTCTCAAAGTATACACCTGCAATAGATATATGGAGCATAGGGTGCATTTTCGCAGAGCTCTTAACTGGGAAGCCTCTATTTCCTGGCAAAAATGTTGTTCATCAATTGGATCTGATGACTGATCTATTGGGAACACCATCTGCTGATGCAATTGCCAGGGTACGCAATGAGAAGGCGCGCAGATACTTGAGCAGTATGCGAAGGAAGAAGCAAATTCCTTTCTCCCAGAAGTTCCCTAATGCAGACCCACTTGCACTTCGTTTATTAGAAAGAATGTTGGCATTTGAACCAAAGGATAGACCTACTGCTGAAGAGGCCCTTGCTGATCCCTATTTTAAGGGTTTGGCAAAGGTGGAGAGAGAACCTTCTGCTCAACCAGTTACCAAGATGGAATTTGAATTTGAGAGGCGAAGGATAACCAAGGAAGATGTAAGAGAGCTCATTTACCGTGAGACTCTTGAGTACCATCCAAAGATGTTGAAGGAGTACTTAGAAGGATCTGAGCCAACAGGCTTCATGTATCCAAGTGCTGTTGACCATTTCAAGAAGCAATTTACTTATCTTGAGGAGCACTACGGAAATGGCACAACAGCTGTTGCGCCTGAAAGAACACATGCATCACTGCCCAGGGCATGTGTTTCATATTCAGATAACCCGGTACAGCATTCAACAGATGTCACAGATGACCTCTCAAGATGCTGCATCAAAGAAGGTGAGAAGCCACAGACGGACAGGAGCAGTGGGATCCCTACGACAAGGCTCCCAATTCAAGTTCCTCATACCATCCAAGGAGCTGCAAGGCCTGGGAAAGTTGTGGGCTCGGTATTACGCTTTAATAATTGTGGGGCAGCAGCTGCAGCAGAGGCTCTTGAGCAGCGAAGGGTGATGAGGAATCCAGCTGCTCCAACTCAATATCCTGCTGCAAGTGCAGCTTCATATCCTAGAAGAAATATGCCCTGTAAAAATGAGAGGGGAGATTGTGAAGGCGTTGAAGGTTCCAACCGGCTGCAGCCAAAGCCTCCTCAGTACATACCAAGGAAAGTTGCTGCCGCTCAGGGTGGATCTGGTAGCCAATGGTACTGA

Protein Analysis

565

Amino Acids

64.09

Weight (kDa)

8.81

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 25 - 316 5e-66 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 26 - 255 6.6e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014907)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 637
Acc36I ACCTGC 1 cut(s) 637
AccB7I CCANNNNNTGG 1 cut(s) 579
AccBSI CCGCTC 1 cut(s) 1664
AccI GTMKAC 1 cut(s) 623
AccII CGCG 2 cut(s) 213, 790
AciI CCGC 1 cut(s) 1662
AclWI GGATC 8 cut(s) 18, 613, 729, 932, 1117, 1351, 1364, 1681
AcsI RAATTY 4 cut(s) 293, 825, 1004, 1010
AcuI CTGAAG 1 cut(s) 942
AfaI GTAC 8 cut(s) 422, 584, 774, 1076, 1100, 1272, 1640, 1691
AfiI CCNNNNNNNGG 1 cut(s) 579
AflIII ACRYGT 1 cut(s) 184
AjnI CCWGG 5 cut(s) 342, 694, 767, 1238, 1414
Alw21I GWGCWC 3 cut(s) 672, 1053, 1185
Alw26I GTCTC 1 cut(s) 1058
AlwI GGATC 8 cut(s) 18, 613, 729, 932, 1117, 1351, 1364, 1681
AlwNI CAGNNNCTG 1 cut(s) 1466
AoxI GGCC 3 cut(s) 588, 927, 1412
ApaI GGGCCC 1 cut(s) 592
ApoI RAATTY 4 cut(s) 293, 825, 1004, 1010
AspLEI GCGC 3 cut(s) 790, 792, 1213
AspS9I GGNCC 3 cut(s) 588, 589, 928
AsuC2I CCSGG 1 cut(s) 1268
AsuHPI GGTGA 4 cut(s) 71, 437, 1337, 1507
BaeGI GKGCMC 1 cut(s) 592
BamHI GGATCC 1 cut(s) 1356
BanII GRGCYC 4 cut(s) 592, 672, 1053, 1433
Bbv12I GWGCWC 3 cut(s) 672, 1053, 1185
BccI CCATC 7 cut(s) 249, 289, 573, 757, 994, 1086, 1403
BciT130I CCWGG 5 cut(s) 344, 696, 769, 1240, 1416
BciVI GTATCC 1 cut(s) 1143
BcnI CCSGG 1 cut(s) 1268
BcoDI GTCTC 1 cut(s) 1058
BfaI CTAG 1 cut(s) 1554
BfmI CTRYAG 4 cut(s) 30, 543, 1467, 1619
BfuAI ACCTGC 1 cut(s) 637
BfuI GTATCC 1 cut(s) 1143
BglII AGATCT 2 cut(s) 451, 498
BmcAI AGTACT 1 cut(s) 1100
Bme1390I CCNGG 6 cut(s) 344, 696, 769, 1240, 1268, 1416
BmgT120I GGNCC 3 cut(s) 588, 589, 928
BmiI GGNNCC 6 cut(s) 233, 590, 591, 1358, 1373, 1609
BmrFI CCNGG 6 cut(s) 344, 696, 769, 1240, 1268, 1416
BmrI ACTGGG 1 cut(s) 687
BmsI GCATC 5 cut(s) 184, 748, 1238, 1298, 1323
BmuI ACTGGG 1 cut(s) 687
BoxI GACNNNNGTC 1 cut(s) 510
BpmI CTGGAG 1 cut(s) 162
Bpu10I CCTNAGC 1 cut(s) 1665
BpuEI CTTGAG 6 cut(s) 479, 820, 1091, 1196, 1288, 1502
BpuMI CCSGG 1 cut(s) 1268
BsaJI CCNNGG 7 cut(s) 768, 1032, 1238, 1239, 1399, 1415, 1646
BsaXI ACNNNNNCTCC 2 cut(s) 135, 165
Bsc4I CCNNNNNNNGG 1 cut(s) 579
Bse118I RCCGGY 1 cut(s) 1614
Bse1I ACTGG 3 cut(s) 145, 682, 989
Bse3DI GCAATG 1 cut(s) 784
BseBI CCWGG 5 cut(s) 344, 696, 769, 1240, 1416
BseDI CCNNGG 7 cut(s) 768, 1032, 1238, 1239, 1399, 1415, 1646
BseGI GGATG 4 cut(s) 241, 281, 1078, 1395
BseLI CCNNNNNNNGG 1 cut(s) 579
BseMI GCAATG 1 cut(s) 784
BseMII CTCAG 3 cut(s) 1104, 1649, 1679
BseNI ACTGG 3 cut(s) 145, 682, 989
BsePI GCGCGC 1 cut(s) 788
BseRI GAGGAG 2 cut(s) 1193, 1623
BseSI GKGCMC 1 cut(s) 592
BsgI GTGCAG 1 cut(s) 1560
Bsh1236I CGCG 2 cut(s) 213, 790
BshFI GGCC 3 cut(s) 590, 929, 1414
BsiHKAI GWGCWC 3 cut(s) 672, 1053, 1185
BsiSI CCGG 3 cut(s) 8, 1268, 1615
BslI CCNNNNNNNGG 1 cut(s) 579
BsmAI GTCTC 1 cut(s) 1058
BsmI GAATGC 2 cut(s) 204, 1276
BsnI GGCC 3 cut(s) 590, 929, 1414
Bsp120I GGGCCC 1 cut(s) 588
Bsp1286I GDGCHC 5 cut(s) 592, 672, 1053, 1185, 1433
Bsp68I TCGCGA 1 cut(s) 213
BspACI CCGC 1 cut(s) 1662
BspANI GGCC 3 cut(s) 590, 929, 1414
BspCNI CTCAG 3 cut(s) 1105, 1648, 1678
BspFNI CGCG 2 cut(s) 213, 790
BspLI GGNNCC 6 cut(s) 233, 590, 591, 1358, 1373, 1609
BspMAI CTGCAG 3 cut(s) 34, 1471, 1623
BspMI ACCTGC 1 cut(s) 637
BspPI GGATC 8 cut(s) 18, 613, 729, 932, 1117, 1351, 1364, 1681
BsrBI CCGCTC 1 cut(s) 1664
BsrDI GCAATG 1 cut(s) 784
BsrFI RCCGGY 1 cut(s) 1614
BsrI ACTGG 3 cut(s) 145, 682, 989
BssAI RCCGGY 1 cut(s) 1614
BssECI CCNNGG 7 cut(s) 768, 1032, 1238, 1239, 1399, 1415, 1646
BssHII GCGCGC 1 cut(s) 788
BssNAI GTATAC 1 cut(s) 624
BssT1I CCWWGG 3 cut(s) 1032, 1399, 1646
Bst1107I GTATAC 1 cut(s) 624
Bst2UI CCWGG 5 cut(s) 344, 696, 769, 1240, 1416
Bst4CI ACNGT 1 cut(s) 1061
Bst6I CTCTTC 1 cut(s) 918
BstAPI GCANNNNNTGC 2 cut(s) 654, 1466
BstC8I GCNNGC 1 cut(s) 790
BstDEI CTNAG 6 cut(s) 227, 472, 1102, 1113, 1635, 1665
BstF5I GGATG 4 cut(s) 241, 281, 1078, 1395
BstFNI CGCG 2 cut(s) 213, 790
BstHHI GCGC 3 cut(s) 790, 792, 1213
BstMAI GTCTC 1 cut(s) 1058
BstNI CCWGG 5 cut(s) 344, 696, 769, 1240, 1416
BstNSI RCATGY 3 cut(s) 188, 1229, 1248
BstPAI GACNNNNGTC 1 cut(s) 510
BstSCI CCNGG 6 cut(s) 342, 694, 767, 1238, 1266, 1414
BstSFI CTRYAG 4 cut(s) 30, 543, 1467, 1619
BstSLI GKGCMC 1 cut(s) 592
BstUI CGCG 2 cut(s) 213, 790
BstX2I RGATCY 6 cut(s) 451, 498, 721, 1109, 1356, 1673
BstYI RGATCY 6 cut(s) 451, 498, 721, 1109, 1356, 1673
BstZ17I GTATAC 1 cut(s) 624
BsuI GTATCC 1 cut(s) 1143
BsuRI GGCC 3 cut(s) 590, 929, 1414
BtsCI GGATG 4 cut(s) 241, 281, 1078, 1395
BtsI GCAGTG 2 cut(s) 1232, 1357
BtsIMutI CAGTG 2 cut(s) 1232, 1357
BtuMI TCGCGA 1 cut(s) 213
BveI ACCTGC 1 cut(s) 637
Cac8I GCNNGC 1 cut(s) 790
CaiI CAGNNNCTG 1 cut(s) 1466
CfoI GCGC 3 cut(s) 790, 792, 1213
Cfr10I RCCGGY 1 cut(s) 1614
Cfr13I GGNCC 3 cut(s) 588, 589, 928
CsiI ACCWGGT 1 cut(s) 342
Csp6I GTAC 8 cut(s) 421, 583, 773, 1075, 1099, 1271, 1639, 1690
CviAII CATG 6 cut(s) 185, 325, 415, 1129, 1226, 1245
CviQI GTAC 8 cut(s) 421, 583, 773, 1075, 1099, 1271, 1639, 1690
DdeI CTNAG 6 cut(s) 227, 472, 1102, 1113, 1635, 1665
Eam1104I CTCTTC 1 cut(s) 918
EarI CTCTTC 1 cut(s) 918
Ecl136II GAGCTC 2 cut(s) 670, 1051
Eco130I CCWWGG 3 cut(s) 1032, 1399, 1646
Eco147I AGGCCT 1 cut(s) 1414
Eco24I GRGCYC 4 cut(s) 592, 672, 1053, 1433
Eco53kI GAGCTC 2 cut(s) 670, 1051
Eco57I CTGAAG 1 cut(s) 942
EcoICRI GAGCTC 2 cut(s) 670, 1051
EcoO109I RGGNCCY 3 cut(s) 588, 589, 928
EcoRI GAATTC 1 cut(s) 293
EcoRII CCWGG 5 cut(s) 342, 694, 767, 1238, 1414
EcoT14I CCWWGG 3 cut(s) 1032, 1399, 1646
EcoT22I ATGCAT 1 cut(s) 1231
EcoT38I GRGCYC 4 cut(s) 592, 672, 1053, 1433
ErhI CCWWGG 3 cut(s) 1032, 1399, 1646
FaeI CATG 6 cut(s) 188, 328, 418, 1132, 1229, 1248
FatI CATG 6 cut(s) 184, 324, 414, 1128, 1225, 1244
FauNDI CATATG 1 cut(s) 127
FblI GTMKAC 1 cut(s) 623
FokI GGATG 4 cut(s) 228, 268, 1065, 1382
FriOI GRGCYC 4 cut(s) 592, 672, 1053, 1433
FspBI CTAG 1 cut(s) 1554
GlaI GCGC 3 cut(s) 789, 791, 1212
GsuI CTGGAG 1 cut(s) 162
HaeIII GGCC 3 cut(s) 590, 929, 1414
HapII CCGG 3 cut(s) 8, 1268, 1615
HhaI GCGC 3 cut(s) 790, 792, 1213
Hin1II CATG 6 cut(s) 188, 328, 418, 1132, 1229, 1248
Hin6I GCGC 3 cut(s) 788, 790, 1211
HinP1I GCGC 3 cut(s) 788, 790, 1211
HincII GTYRAC 1 cut(s) 1147
HindII GTYRAC 1 cut(s) 1147
HinfI GANTC 3 cut(s) 329, 1066, 1504
HpaII CCGG 3 cut(s) 8, 1268, 1615
HphI GGTGA 4 cut(s) 71, 437, 1337, 1507
Hpy166II GTNNAC 3 cut(s) 40, 624, 1147
Hpy188I TCNGA 5 cut(s) 193, 334, 726, 1114, 1261
Hpy8I GTNNAC 3 cut(s) 40, 624, 1147
HpyCH4III ACNGT 1 cut(s) 1061
HpyF3I CTNAG 6 cut(s) 227, 472, 1102, 1113, 1635, 1665
Hsp92II CATG 6 cut(s) 188, 328, 418, 1132, 1229, 1248
HspAI GCGC 3 cut(s) 788, 790, 1211
LmnI GCTCC 7 cut(s) 237, 645, 1180, 1347, 1377, 1403, 1519
LweI GCATC 5 cut(s) 184, 748, 1238, 1298, 1323
MabI ACCWGGT 1 cut(s) 342
MaeI CTAG 1 cut(s) 1554
MaeIII GTNAC 4 cut(s) 273, 503, 991, 1288
MbiI CCGCTC 1 cut(s) 1664
MboII GAAGA 7 cut(s) 37, 200, 398, 829, 935, 1049, 1569
MfeI CAATTG 2 cut(s) 716, 762
MflI RGATCY 6 cut(s) 451, 498, 721, 1109, 1356, 1673
MhlI GDGCHC 5 cut(s) 592, 672, 1053, 1185, 1433
MlyI GAGTC 1 cut(s) 1060
MmeI TCCRAC 2 cut(s) 1541, 1635
Mph1103I ATGCAT 1 cut(s) 1231
MseI TTAA 5 cut(s) 219, 351, 674, 948, 1446
MspA1I CMGCKG 3 cut(s) 1205, 1466, 1511
MspI CCGG 3 cut(s) 8, 1268, 1615
MspR9I CCNGG 6 cut(s) 344, 696, 769, 1240, 1268, 1416
MunI CAATTG 2 cut(s) 716, 762
Mva1269I GAATGC 2 cut(s) 204, 1276
MvaI CCWGG 5 cut(s) 344, 696, 769, 1240, 1416
MvnI CGCG 2 cut(s) 213, 790
NciI CCSGG 1 cut(s) 1268
NdeI CATATG 1 cut(s) 127
NlaIII CATG 6 cut(s) 188, 328, 418, 1132, 1229, 1248
NlaIV GGNNCC 6 cut(s) 233, 590, 591, 1358, 1373, 1609
NmuCI GTSAC 2 cut(s) 503, 1288
NruI TCGCGA 1 cut(s) 213
NsiI ATGCAT 1 cut(s) 1231
NspI RCATGY 3 cut(s) 188, 1229, 1248
PaqCI CACCTGC 1 cut(s) 637
PasI CCCWGGG 1 cut(s) 1239
PauI GCGCGC 1 cut(s) 788
PceI AGGCCT 1 cut(s) 1414
PciI ACATGT 1 cut(s) 184
PctI GAATGC 2 cut(s) 204, 1276
PfeI GAWTC 2 cut(s) 329, 1504
PflMI CCANNNNNTGG 1 cut(s) 579
PleI GAGTC 1 cut(s) 1060
PpsI GAGTC 1 cut(s) 1060
PscI ACATGT 1 cut(s) 184
PshAI GACNNNNGTC 1 cut(s) 510
Psp124BI GAGCTC 2 cut(s) 672, 1053
Psp6I CCWGG 5 cut(s) 342, 694, 767, 1238, 1414
PspGI CCWGG 5 cut(s) 342, 694, 767, 1238, 1414
PspN4I GGNNCC 6 cut(s) 233, 590, 591, 1358, 1373, 1609
PspOMI GGGCCC 1 cut(s) 588
PspPI GGNCC 3 cut(s) 588, 589, 928
PstI CTGCAG 3 cut(s) 34, 1471, 1623
PstNI CAGNNNCTG 1 cut(s) 1466
PsuI RGATCY 6 cut(s) 451, 498, 721, 1109, 1356, 1673
PteI GCGCGC 1 cut(s) 788
PvuII CAGCTG 3 cut(s) 1205, 1466, 1511
RruI TCGCGA 1 cut(s) 213
RsaI GTAC 8 cut(s) 422, 584, 774, 1076, 1100, 1272, 1640, 1691
RsaNI GTAC 8 cut(s) 421, 583, 773, 1075, 1099, 1271, 1639, 1690
SacI GAGCTC 2 cut(s) 672, 1053
SaqAI TTAA 5 cut(s) 219, 351, 674, 948, 1446
Sau96I GGNCC 3 cut(s) 588, 589, 928
ScaI AGTACT 1 cut(s) 1100
SchI GAGTC 1 cut(s) 1060
ScrFI CCNGG 6 cut(s) 344, 696, 769, 1240, 1268, 1416
SduI GDGCHC 5 cut(s) 592, 672, 1053, 1185, 1433
SexAI ACCWGGT 1 cut(s) 342
SfaNI GCATC 5 cut(s) 184, 748, 1238, 1298, 1323
SfcI CTRYAG 4 cut(s) 30, 543, 1467, 1619
SmlI CTYRAG 6 cut(s) 494, 799, 1070, 1175, 1303, 1481
SmoI CTYRAG 6 cut(s) 494, 799, 1070, 1175, 1303, 1481
SseBI AGGCCT 1 cut(s) 1414
SsiI CCGC 1 cut(s) 1662
SspMI CTAG 1 cut(s) 1554
SstI GAGCTC 2 cut(s) 672, 1053
StuI AGGCCT 1 cut(s) 1414
StyD4I CCNGG 6 cut(s) 342, 694, 767, 1238, 1266, 1414
StyI CCWWGG 3 cut(s) 1032, 1399, 1646
TaaI ACNGT 1 cut(s) 1061
TaqI TCGA 1 cut(s) 409
TatI WGTACW 3 cut(s) 420, 1098, 1638
TauI GCSGC 1 cut(s) 1664
TfiI GAWTC 2 cut(s) 329, 1504
Tru1I TTAA 5 cut(s) 219, 351, 674, 948, 1446
Tru9I TTAA 5 cut(s) 219, 351, 674, 948, 1446
TscAI CASTG 2 cut(s) 1239, 1357
TseFI GTSAC 2 cut(s) 503, 1288
Tsp45I GTSAC 2 cut(s) 503, 1288
TspDTI ATGAA 5 cut(s) 431, 701, 1117, 1242, 1536
TspGWI ACGGA 3 cut(s) 575, 1203, 1355
TspRI CASTG 2 cut(s) 1239, 1357
Van91I CCANNNNNTGG 1 cut(s) 579
XapI RAATTY 4 cut(s) 293, 825, 1004, 1010
XceI RCATGY 3 cut(s) 188, 1229, 1248
XmiI GTMKAC 1 cut(s) 623
XspI CTAG 1 cut(s) 1554
ZrmI AGTACT 1 cut(s) 1100
Zsp2I ATGCAT 1 cut(s) 1231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.