Rorug04G0155100

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
27128887 .. 27132418
3532 bp
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UTR
Exon/CDS
Intron
Rorug04G0155100.1

Sequence Viewer

Length: 315 bp
ATGTCAAGGACATCTTGGGTTTGCTCAAAACCATGCATCCCTTGTAGCGGGAGAAGAAATCGTGGCCTCGCAAGGAGTCTCAGTGCAAACTCTACGGCATTTCACGAGATTAGAGTTGTCAACGGTGTCCTACCTATTGGTGACTATTCCTTTGCTAAGAATAACAAGGTGCATGTGTACATCAAGTGGCGTGCGACTAAAAATTGGCCTGAAACTGATGATGCTGTTGAAAAGGTCCATGAAGGTGCATTTGGTTATGTTGGTGATGATCAGTCACTTCGTAATTACTTGGAATCTCTGGGACAACATCAGTAA

Protein Analysis

104

Amino Acids

11.72

Weight (kDa)

9.15

Isoelectric Point (pI)

31.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014907)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 48
AfaI GTAC 1 cut(s) 179
AfiI CCNNNNNNNGG 1 cut(s) 47
AgsI TTSAA 1 cut(s) 230
AjuI GAANNNNNNNTTGG 2 cut(s) 234, 266
Alw26I GTCTC 1 cut(s) 83
AoxI GGCC 2 cut(s) 64, 206
ArsI GACNNNNNNTTYG 2 cut(s) 134, 166
AspS9I GGNCC 1 cut(s) 235
AsuHPI GGTGA 2 cut(s) 152, 275
AvaII GGWCC 1 cut(s) 235
BauI CACGAG 1 cut(s) 104
BceAI ACGGC 1 cut(s) 111
BclI TGATCA 1 cut(s) 268
BcoDI GTCTC 1 cut(s) 83
Bme18I GGWCC 1 cut(s) 235
BmgT120I GGNCC 1 cut(s) 235
BmsI GCATC 2 cut(s) 45, 211
BsaXI ACNNNNNCTCC 2 cut(s) 67, 97
Bsc4I CCNNNNNNNGG 1 cut(s) 47
BseGI GGATG 1 cut(s) 36
BseLI CCNNNNNNNGG 1 cut(s) 47
BseMII CTCAG 1 cut(s) 94
BshFI GGCC 2 cut(s) 66, 208
BslI CCNNNNNNNGG 1 cut(s) 47
BsmAI GTCTC 1 cut(s) 83
BsnI GGCC 2 cut(s) 66, 208
Bsp1407I TGTACA 1 cut(s) 177
Bsp143I GATC 1 cut(s) 268
BspACI CCGC 1 cut(s) 48
BspANI GGCC 2 cut(s) 66, 208
BspCNI CTCAG 1 cut(s) 93
BsrGI TGTACA 1 cut(s) 177
BssMI GATC 1 cut(s) 268
BssSI CACGAG 1 cut(s) 104
Bst2BI CACGAG 1 cut(s) 104
Bst4CI ACNGT 1 cut(s) 125
BstAUI TGTACA 1 cut(s) 177
BstC8I GCNNGC 1 cut(s) 192
BstDEI CTNAG 2 cut(s) 80, 156
BstF5I GGATG 1 cut(s) 36
BstKTI GATC 1 cut(s) 271
BstMAI GTCTC 1 cut(s) 83
BstMBI GATC 1 cut(s) 268
BstNSI RCATGY 1 cut(s) 176
BsuRI GGCC 2 cut(s) 66, 208
BtsCI GGATG 1 cut(s) 36
BtsIMutI CAGTG 1 cut(s) 88
Cac8I GCNNGC 1 cut(s) 192
Cfr13I GGNCC 1 cut(s) 235
Csp6I GTAC 1 cut(s) 178
CviAII CATG 3 cut(s) 33, 173, 239
CviJI RGCY 2 cut(s) 66, 208
CviKI_1 RGCY 2 cut(s) 66, 208
CviQI GTAC 1 cut(s) 178
DdeI CTNAG 2 cut(s) 80, 156
DpnI GATC 1 cut(s) 270
DpnII GATC 1 cut(s) 268
Eco47I GGWCC 1 cut(s) 235
EcoT22I ATGCAT 1 cut(s) 38
FaeI CATG 3 cut(s) 36, 176, 242
FaiI YATR 4 cut(s) 34, 174, 240, 258
FalI AAGNNNNNCTT 1 cut(s) 30
FatI CATG 3 cut(s) 32, 172, 238
FauI CCCGC 1 cut(s) 41
FbaI TGATCA 1 cut(s) 268
FokI GGATG 1 cut(s) 23
HaeIII GGCC 2 cut(s) 66, 208
Hin1II CATG 3 cut(s) 36, 176, 242
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 2 cut(s) 76, 293
HphI GGTGA 2 cut(s) 152, 275
Hpy166II GTNNAC 2 cut(s) 121, 178
Hpy188III TCNNGA 1 cut(s) 104
Hpy8I GTNNAC 2 cut(s) 121, 178
HpyAV CCTTC 1 cut(s) 236
HpyCH4III ACNGT 1 cut(s) 125
HpyCH4V TGCA 4 cut(s) 36, 86, 172, 248
HpyF3I CTNAG 2 cut(s) 80, 156
Hsp92II CATG 3 cut(s) 36, 176, 242
Ksp22I TGATCA 1 cut(s) 268
Kzo9I GATC 1 cut(s) 268
LpnPI CCDG 2 cut(s) 222, 284
LweI GCATC 2 cut(s) 45, 211
MaeIII GTNAC 2 cut(s) 140, 273
MalI GATC 1 cut(s) 270
MboI GATC 1 cut(s) 268
MboII GAAGA 1 cut(s) 66
MluCI AATT 2 cut(s) 202, 283
MlyI GAGTC 1 cut(s) 85
MnlI CCTC 1 cut(s) 77
Mph1103I ATGCAT 1 cut(s) 38
MslI CAYNNNNRTG 1 cut(s) 243
NdeII GATC 1 cut(s) 268
NlaIII CATG 3 cut(s) 36, 176, 242
NmuCI GTSAC 2 cut(s) 140, 273
NsiI ATGCAT 1 cut(s) 38
NspI RCATGY 1 cut(s) 176
PfeI GAWTC 1 cut(s) 293
PleI GAGTC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 84
PspPI GGNCC 1 cut(s) 235
RsaI GTAC 1 cut(s) 179
RsaNI GTAC 1 cut(s) 178
RseI CAYNNNNRTG 1 cut(s) 243
Sau3AI GATC 1 cut(s) 268
Sau96I GGNCC 1 cut(s) 235
SchI GAGTC 1 cut(s) 85
SetI ASST 4 cut(s) 136, 171, 237, 247
SfaNI GCATC 2 cut(s) 45, 211
SinI GGWCC 1 cut(s) 235
SmiMI CAYNNNNRTG 1 cut(s) 243
Sse9I AATT 2 cut(s) 202, 283
SsiI CCGC 1 cut(s) 48
TaaI ACNGT 1 cut(s) 125
TasI AATT 2 cut(s) 202, 283
TatI WGTACW 1 cut(s) 177
TfiI GAWTC 1 cut(s) 293
TscAI CASTG 1 cut(s) 88
TseFI GTSAC 2 cut(s) 140, 273
Tsp45I GTSAC 2 cut(s) 140, 273
TspDTI ATGAA 1 cut(s) 255
TspRI CASTG 1 cut(s) 88
VpaK11BI GGWCC 1 cut(s) 235
XceI RCATGY 1 cut(s) 176
Zsp2I ATGCAT 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.