Rh4AG217000

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
51444393 .. 51450082
5690 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG217000.1

Sequence Viewer

Length: 1413 bp
ATGCAGCCTGATCAAAGAAAAAAGTCTGTGGATGTGGACTTCTTCACTGAATATGGTGAGGGGAGTAGGTATAAAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGAGTTGTTTGTTCTGCATTTGATACGCATACTGGAGAAAAGGTAGCTATCAAGAAAATAAATGATATTTTTGAACATGTCTCGGATGCCACCCGCATCCTTCGTGAGATTAAACTTCTTAGGCTCCTGCGTCATCCAGACATTGTGGAGATCAAGCACATTTTGTTACCTCCATCCAGAAGGGAATTCAAAGACATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTTATTAAAGCAAATGATGATTTGACACCAGAACATTATCAGTTCTTTCTTTATCAGCTTCTCCGAGGAATGAAGTACATACACACAGCAAATGTTTTTCACCGAGATCTAAAACCCAAAAACATCTTGGCAAATGCTGACTGCAAACTGAAGATCTGCGACTTTGGTCTTGCTAGGGTAGCTTTCAATGATACTCCCACAGCTATATTTTGGACAGACTATGTTGCCACAAGATGGTACAGGGCTCCTGAGTTGTGTGGATCATTTTTCTCAAAGTATACACCTGCAATAGATATCTGGAGCATTGGGTGCATCTTTGCAGAGCTTTTAACTGGAAAGCCTCTTTTTCCGGGCAAAAATGTTGTCCATCAGTTGGACCTCATGACTGATTTATTGGGAACACCATCTGCTGAAGCAATTGCTAGGGTACGCAATGAGAAGGCTCGCAGATACTTAAGCAGTATGAGAAAGAAGAGGCAGATTCCTTTTTCCCAGAAATTCCCAAATGCAGACCCACTTGCTCTACGTTTATTAGAAAGAATGTTAGCTTTTGAACCGAAGGATAGACCTACTGCTGAAGAGGCTCTTGCTGATCCCTATTTCAAGGGTTTGGCAAAAGTGGAGAGAGAACCTTCGGCTCAACCAGTTACCAAGATGGAATTTGAGTTTGAGAGGCGAAGGATAACCAAAGAAGATGTTAGAGAGCTTATTTATCGTGAGACTCTCGAGTATCATCCTAAGATGTTGAAGGAGTACTTAGACGGATCAGAGCCAACAGGATTCATGTATCCAAGTGCTGTTGACCATTTCAAGAAGCAATTTGCATATCTTGAGGAGCACTATGGAAATGGCACAGTTGGTGCTGCACCTGAGAGGCAACATGCATCACTACCCAGGGCATGTGTTTCGTATACCAATAACTCAGTGCAGCAACCAACAGAAGTCACAGAAGACCTTGCAAAATGCTGCATCAAAGAAATTGAGAAGCCAGTGGACAGGAACTGCGGAATCCCTACAACAAAGCCTCCAATTCAAGCTCCTCAGACCATCCAAGGTATGGATTGTAGTTGA

Protein Analysis

470

Amino Acids

54.07

Weight (kDa)

7.57

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 24 - 315 2.9e-66 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 25 - 254 9.9e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014907)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 634
Acc36I ACCTGC 1 cut(s) 634
AccB7I CCANNNNNTGG 3 cut(s) 576, 715, 1399
AccI GTMKAC 2 cut(s) 620, 1253
AciI CCGC 2 cut(s) 199, 1347
AclWI GGATC 3 cut(s) 610, 929, 1114
AcsI RAATTY 3 cut(s) 290, 839, 1001
AcuI CTGAAG 3 cut(s) 512, 774, 939
AfaI GTAC 4 cut(s) 419, 581, 771, 1097
AfiI CCNNNNNNNGG 3 cut(s) 576, 715, 1399
AflII CTTAAG 1 cut(s) 796
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 9 cut(s) 179, 295, 317, 529, 896, 946, 1090, 1153, 1376
AjnI CCWGG 1 cut(s) 1235
AluBI AGCT 9 cut(s) 102, 152, 400, 524, 545, 667, 890, 1048, 1379
AluI AGCT 9 cut(s) 102, 152, 400, 524, 545, 667, 890, 1048, 1379
Alw21I GWGCWC 1 cut(s) 1182
Alw26I GTCTC 2 cut(s) 190, 1055
AlwI GGATC 3 cut(s) 610, 929, 1114
AlwNI CAGNNNCTG 1 cut(s) 1344
Ama87I CYCGRG 1 cut(s) 1067
ApeKI GCWGC 4 cut(s) 4, 1205, 1270, 1308
ApoI RAATTY 3 cut(s) 290, 839, 1001
ArsI GACNNNNNNTTYG 2 cut(s) 690, 722
AspS9I GGNCC 1 cut(s) 718
AsuC2I CCSGG 1 cut(s) 693
AsuHPI GGTGA 2 cut(s) 68, 434
AvaI CYCGRG 1 cut(s) 1067
AvaII GGWCC 1 cut(s) 718
BanII GRGCYC 1 cut(s) 589
BbsI GAAGAC 1 cut(s) 1299
Bbv12I GWGCWC 1 cut(s) 1182
BbvI GCAGC 4 cut(s) 16, 1192, 1282, 1295
BccI CCATC 6 cut(s) 286, 570, 717, 754, 991, 1397
BcgI CGANNNNNNTGC 2 cut(s) 1230, 1264
BciT130I CCWGG 1 cut(s) 1237
BciVI GTATCC 1 cut(s) 1140
BclI TGATCA 1 cut(s) 10
BcnI CCSGG 1 cut(s) 693
BcoDI GTCTC 2 cut(s) 190, 1055
BfaI CTAG 2 cut(s) 516, 765
BfrI CTTAAG 1 cut(s) 796
BfuAI ACCTGC 1 cut(s) 634
BfuI GTATCC 1 cut(s) 1140
BglII AGATCT 2 cut(s) 448, 495
BisI GCNGC 4 cut(s) 5, 1206, 1271, 1309
BlsI GCNGC 4 cut(s) 6, 1207, 1272, 1310
BmcAI AGTACT 1 cut(s) 1097
Bme1390I CCNGG 2 cut(s) 693, 1237
Bme18I GGWCC 1 cut(s) 718
BmeT110I CYCGRG 1 cut(s) 1067
BmgT120I GGNCC 1 cut(s) 718
BmiI GGNNCC 2 cut(s) 230, 588
BmrFI CCNGG 2 cut(s) 693, 1237
BmsI GCATC 5 cut(s) 181, 210, 663, 1235, 1320
BoxI GACNNNNGTC 1 cut(s) 507
BpiI GAAGAC 1 cut(s) 1299
BpmI CTGGAG 2 cut(s) 159, 661
BpuEI CTTGAG 1 cut(s) 1193
BpuMI CCSGG 1 cut(s) 693
BsaBI GATNNNNATC 1 cut(s) 336
BsaJI CCNNGG 4 cut(s) 406, 1235, 1236, 1393
BsaXI ACNNNNNCTCC 4 cut(s) 132, 162, 1351, 1381
Bsc4I CCNNNNNNNGG 3 cut(s) 576, 715, 1399
Bse1I ACTGG 4 cut(s) 142, 679, 986, 1331
Bse3DI GCAATG 1 cut(s) 781
Bse8I GATNNNNATC 1 cut(s) 336
BseBI CCWGG 1 cut(s) 1237
BseDI CCNNGG 4 cut(s) 406, 1235, 1236, 1393
BseGI GGATG 7 cut(s) 37, 196, 201, 238, 278, 1075, 1389
BseJI GATNNNNATC 1 cut(s) 336
BseLI CCNNNNNNNGG 3 cut(s) 576, 715, 1399
BseMI GCAATG 1 cut(s) 781
BseMII CTCAG 4 cut(s) 582, 1203, 1278, 1397
BseNI ACTGG 4 cut(s) 142, 679, 986, 1331
BseRI GAGGAG 2 cut(s) 1190, 1371
BseXI GCAGC 4 cut(s) 16, 1192, 1282, 1295
BsgI GTGCAG 2 cut(s) 1191, 1289
BsiHKAI GWGCWC 1 cut(s) 1182
BsiHKCI CYCGRG 1 cut(s) 1067
BsiSI CCGG 1 cut(s) 692
BslI CCNNNNNNNGG 3 cut(s) 576, 715, 1399
BsmAI GTCTC 2 cut(s) 190, 1055
BsoBI CYCGRG 1 cut(s) 1067
Bsp1286I GDGCHC 2 cut(s) 589, 1182
Bsp143I GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
BspACI CCGC 2 cut(s) 199, 1347
BspCNI CTCAG 4 cut(s) 583, 1204, 1277, 1396
BspHI TCATGA 1 cut(s) 723
BspLI GGNNCC 2 cut(s) 230, 588
BspMI ACCTGC 1 cut(s) 634
BspPI GGATC 3 cut(s) 610, 929, 1114
BspTI CTTAAG 1 cut(s) 796
BsrDI GCAATG 1 cut(s) 781
BsrI ACTGG 4 cut(s) 142, 679, 986, 1331
BssECI CCNNGG 4 cut(s) 406, 1235, 1236, 1393
BssMI GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
BssNAI GTATAC 2 cut(s) 621, 1254
BssT1I CCWWGG 1 cut(s) 1393
Bst1107I GTATAC 2 cut(s) 621, 1254
Bst2UI CCWGG 1 cut(s) 1237
Bst4CI ACNGT 1 cut(s) 1198
Bst6I CTCTTC 2 cut(s) 809, 915
BstAFI CTTAAG 1 cut(s) 796
BstAPI GCANNNNNTGC 1 cut(s) 651
BstC8I GCNNGC 1 cut(s) 787
BstDEI CTNAG 7 cut(s) 224, 591, 1080, 1099, 1212, 1264, 1383
BstF5I GGATG 7 cut(s) 37, 196, 201, 238, 278, 1075, 1389
BstKTI GATC 7 cut(s) 13, 258, 451, 498, 605, 937, 1109
BstMAI GTCTC 2 cut(s) 190, 1055
BstMBI GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
BstMWI GCNNNNNNNGC 3 cut(s) 521, 651, 923
BstNI CCWGG 1 cut(s) 1237
BstNSI RCATGY 3 cut(s) 185, 1226, 1245
BstPAI GACNNNNGTC 1 cut(s) 507
BstSCI CCNGG 2 cut(s) 691, 1235
BstV1I GCAGC 4 cut(s) 16, 1192, 1282, 1295
BstV2I GAAGAC 1 cut(s) 1299
BstX2I RGATCY 2 cut(s) 448, 495
BstYI RGATCY 2 cut(s) 448, 495
BstZ17I GTATAC 2 cut(s) 621, 1254
BsuI GTATCC 1 cut(s) 1140
BtsCI GGATG 7 cut(s) 37, 196, 201, 238, 278, 1075, 1389
BtsIMutI CAGTG 3 cut(s) 45, 1272, 1338
BveI ACCTGC 1 cut(s) 634
Cac8I GCNNGC 1 cut(s) 787
CaiI CAGNNNCTG 1 cut(s) 1344
CciI TCATGA 1 cut(s) 723
Cfr13I GGNCC 1 cut(s) 718
CseI GACGC 1 cut(s) 224
Csp6I GTAC 4 cut(s) 418, 580, 770, 1096
CviAII CATG 6 cut(s) 182, 322, 724, 1126, 1223, 1242
CviQI GTAC 4 cut(s) 418, 580, 770, 1096
DdeI CTNAG 7 cut(s) 224, 591, 1080, 1099, 1212, 1264, 1383
DpnI GATC 7 cut(s) 12, 257, 450, 497, 604, 936, 1108
DpnII GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
Eam1104I CTCTTC 2 cut(s) 809, 915
EarI CTCTTC 2 cut(s) 809, 915
Eco130I CCWWGG 1 cut(s) 1393
Eco24I GRGCYC 1 cut(s) 589
Eco32I GATATC 1 cut(s) 637
Eco47I GGWCC 1 cut(s) 718
Eco57I CTGAAG 3 cut(s) 512, 774, 939
Eco88I CYCGRG 1 cut(s) 1067
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 1 cut(s) 1235
EcoRV GATATC 1 cut(s) 637
EcoT14I CCWWGG 1 cut(s) 1393
EcoT22I ATGCAT 1 cut(s) 1228
EcoT38I GRGCYC 1 cut(s) 589
ErhI CCWWGG 1 cut(s) 1393
FaeI CATG 6 cut(s) 185, 325, 727, 1129, 1226, 1245
FalI AAGNNNNNCTT 4 cut(s) 912, 944, 1082, 1114
FatI CATG 6 cut(s) 181, 321, 723, 1125, 1222, 1241
FauI CCCGC 1 cut(s) 206
FbaI TGATCA 1 cut(s) 10
FblI GTMKAC 2 cut(s) 620, 1253
Fnu4HI GCNGC 4 cut(s) 5, 1206, 1271, 1309
FokI GGATG 7 cut(s) 44, 188, 203, 225, 265, 1062, 1376
FriOI GRGCYC 1 cut(s) 589
Fsp4HI GCNGC 4 cut(s) 5, 1206, 1271, 1309
FspBI CTAG 2 cut(s) 516, 765
GluI GCNGC 4 cut(s) 5, 1206, 1271, 1309
GsuI CTGGAG 2 cut(s) 159, 661
HapII CCGG 1 cut(s) 692
HgaI GACGC 1 cut(s) 224
Hin1II CATG 6 cut(s) 185, 325, 727, 1129, 1226, 1245
HincII GTYRAC 1 cut(s) 1144
HindII GTYRAC 1 cut(s) 1144
HinfI GANTC 5 cut(s) 326, 823, 1063, 1122, 1350
HpaII CCGG 1 cut(s) 692
HphI GGTGA 2 cut(s) 68, 434
Hpy166II GTNNAC 5 cut(s) 37, 621, 1144, 1254, 1336
Hpy188I TCNGA 5 cut(s) 190, 331, 407, 1111, 1386
Hpy8I GTNNAC 5 cut(s) 37, 621, 1144, 1254, 1336
HpyAV CCTTC 7 cut(s) 215, 279, 775, 895, 984, 1014, 1084
HpyCH4III ACNGT 1 cut(s) 1198
HpyCH4IV ACGT 1 cut(s) 868
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 651, 923
HpyF3I CTNAG 7 cut(s) 224, 591, 1080, 1099, 1212, 1264, 1383
HpySE526I ACGT 1 cut(s) 868
Hsp92II CATG 6 cut(s) 185, 325, 727, 1129, 1226, 1245
Ksp22I TGATCA 1 cut(s) 10
Kzo9I GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
LmnI GCTCC 5 cut(s) 234, 592, 642, 1177, 1384
Lsp1109I GCAGC 4 cut(s) 16, 1192, 1282, 1295
LweI GCATC 5 cut(s) 181, 210, 663, 1235, 1320
MaeI CTAG 2 cut(s) 516, 765
MaeII ACGT 1 cut(s) 868
MaeIII GTNAC 3 cut(s) 270, 988, 1285
MalI GATC 7 cut(s) 12, 257, 450, 497, 604, 936, 1108
MboI GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
MboII GAAGA 6 cut(s) 34, 505, 826, 932, 1046, 1304
MfeI CAATTG 1 cut(s) 759
MflI RGATCY 2 cut(s) 448, 495
MhlI GDGCHC 2 cut(s) 589, 1182
MluCI AATT 8 cut(s) 87, 290, 759, 839, 1001, 1160, 1320, 1371
MlyI GAGTC 1 cut(s) 1057
MmeI TCCRAC 1 cut(s) 696
Mph1103I ATGCAT 1 cut(s) 1228
MseI TTAA 4 cut(s) 216, 348, 671, 797
MspCI CTTAAG 1 cut(s) 796
MspI CCGG 1 cut(s) 692
MspR9I CCNGG 2 cut(s) 693, 1237
MunI CAATTG 1 cut(s) 759
MvaI CCWGG 1 cut(s) 1237
MwoI GCNNNNNNNGC 3 cut(s) 521, 651, 923
NciI CCSGG 1 cut(s) 693
NdeII GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
NlaIII CATG 6 cut(s) 185, 325, 727, 1129, 1226, 1245
NlaIV GGNNCC 2 cut(s) 230, 588
NmuCI GTSAC 1 cut(s) 1285
NsiI ATGCAT 1 cut(s) 1228
NspI RCATGY 3 cut(s) 185, 1226, 1245
PaeR7I CTCGAG 1 cut(s) 1067
PagI TCATGA 1 cut(s) 723
PaqCI CACCTGC 1 cut(s) 634
PasI CCCWGGG 1 cut(s) 1236
PciI ACATGT 1 cut(s) 181
PfeI GAWTC 4 cut(s) 326, 823, 1122, 1350
PflMI CCANNNNNTGG 3 cut(s) 576, 715, 1399
PkrI GCNGC 4 cut(s) 6, 1207, 1272, 1310
PleI GAGTC 1 cut(s) 1057
PpsI GAGTC 1 cut(s) 1057
PscI ACATGT 1 cut(s) 181
PshAI GACNNNNGTC 1 cut(s) 507
Psp6I CCWGG 1 cut(s) 1235
PspGI CCWGG 1 cut(s) 1235
PspN4I GGNNCC 2 cut(s) 230, 588
PspPI GGNCC 1 cut(s) 718
PstNI CAGNNNCTG 1 cut(s) 1344
PsuI RGATCY 2 cut(s) 448, 495
RsaI GTAC 4 cut(s) 419, 581, 771, 1097
RsaNI GTAC 4 cut(s) 418, 580, 770, 1096
SaqAI TTAA 4 cut(s) 216, 348, 671, 797
SatI GCNGC 4 cut(s) 5, 1206, 1271, 1309
Sau3AI GATC 7 cut(s) 10, 255, 448, 495, 602, 934, 1106
Sau96I GGNCC 1 cut(s) 718
ScaI AGTACT 1 cut(s) 1097
SchI GAGTC 1 cut(s) 1057
ScrFI CCNGG 2 cut(s) 693, 1237
SduI GDGCHC 2 cut(s) 589, 1182
SfaNI GCATC 5 cut(s) 181, 210, 663, 1235, 1320
Sfr274I CTCGAG 1 cut(s) 1067
SinI GGWCC 1 cut(s) 718
SlaI CTCGAG 1 cut(s) 1067
SmlI CTYRAG 3 cut(s) 796, 1067, 1172
SmoI CTYRAG 3 cut(s) 796, 1067, 1172
Sse9I AATT 8 cut(s) 87, 290, 759, 839, 1001, 1160, 1320, 1371
SsiI CCGC 2 cut(s) 199, 1347
SspMI CTAG 2 cut(s) 516, 765
StyD4I CCNGG 2 cut(s) 691, 1235
StyI CCWWGG 1 cut(s) 1393
TaaI ACNGT 1 cut(s) 1198
TaiI ACGT 1 cut(s) 871
TaqI TCGA 1 cut(s) 1068
TasI AATT 8 cut(s) 87, 290, 759, 839, 1001, 1160, 1320, 1371
TatI WGTACW 2 cut(s) 417, 1095
TfiI GAWTC 4 cut(s) 326, 823, 1122, 1350
Tru1I TTAA 4 cut(s) 216, 348, 671, 797
Tru9I TTAA 4 cut(s) 216, 348, 671, 797
TscAI CASTG 3 cut(s) 52, 1272, 1338
TseFI GTSAC 1 cut(s) 1285
TseI GCWGC 4 cut(s) 4, 1205, 1270, 1308
Tsp45I GTSAC 1 cut(s) 1285
TspDTI ATGAA 2 cut(s) 428, 1114
TspGWI ACGGA 1 cut(s) 1119
TspRI CASTG 3 cut(s) 52, 1272, 1338
Van91I CCANNNNNTGG 3 cut(s) 576, 715, 1399
Vha464I CTTAAG 1 cut(s) 796
VpaK11BI GGWCC 1 cut(s) 718
XapI RAATTY 3 cut(s) 290, 839, 1001
XceI RCATGY 3 cut(s) 185, 1226, 1245
XcmI CCANNNNNNNNNTGG 2 cut(s) 466, 1396
XhoI CTCGAG 1 cut(s) 1067
XmiI GTMKAC 2 cut(s) 620, 1253
XspI CTAG 2 cut(s) 516, 765
ZrmI AGTACT 1 cut(s) 1097
Zsp2I ATGCAT 1 cut(s) 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.