PGAP1-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27325 AT3G27325 AT3G27325 |
| fragaria_vesca | FvH4_6g52480 FvH4_6g52480 FvH4_6g52480 FvH4_6g52480 FvH4_6g52480 FvH4_6g52480 |
| malus_domestica | MD09G1017700.v1.1 MD17G1018500.v1.1 |
| prunus_persica | Prupe.3G299200_v2.0.a1 Prupe.3G299200_v2.0.a1 Prupe.3G299200_v2.0.a1 Prupe.3G299200_v2.0.a1 Prupe.3G299200_v2.0.a1 Prupe.3G299200_v2.0.a1 |
| pyrus_communis | pycom111g01460 pycom17g01510 |
| rosa_chinensis | RchiOBHm_Chr2g0174121 |
| rosa_laevigata | RLG00000022248 |
| rosa_multiflora | Rmu_sc0023199.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00078440 |
| rosa_rugosa | Rorug02G0574800 |
| rosa_samantha | Rh2AG654400 Rh2BG665600 Rh2CG629800 Rh2DG680200 |
| rosa_wichuraiana | Rw2G053710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 894, 1782, 2684 |
| Acc16I | TGCGCA | 1 cut(s) | 1526 |
| Acc36I | ACCTGC | 3 cut(s) | 286, 1871, 3147 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1430 |
| AccBSI | CCGCTC | 2 cut(s) | 249, 2781 |
| AccI | GTMKAC | 1 cut(s) | 1071 |
| AccII | CGCG | 2 cut(s) | 74, 172 |
| AccIII | TCCGGA | 1 cut(s) | 1076 |
| AciI | CCGC | 8 cut(s) | 74, 249, 282, 338, 1763, 2489, 2493, 2779 |
| AclWI | GGATC | 5 cut(s) | 474, 561, 2105, 2262, 3034 |
| AcoI | YGGCCR | 2 cut(s) | 1451, 2490 |
| AcsI | RAATTY | 2 cut(s) | 2294, 3127 |
| AcuI | CTGAAG | 2 cut(s) | 405, 2856 |
| AcvI | CACGTG | 1 cut(s) | 841 |
| AflIII | ACRYGT | 4 cut(s) | 126, 840, 1201, 1992 |
| AgeI | ACCGGT | 2 cut(s) | 2550, 3032 |
| AjiI | CACGTC | 1 cut(s) | 1995 |
| AjnI | CCWGG | 6 cut(s) | 443, 1416, 1561, 2969, 3097, 3171 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2603, 2635 |
| AleI | CACNNNNGTG | 1 cut(s) | 3035 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1727, 1759 |
| Alw26I | GTCTC | 5 cut(s) | 106, 1209, 2006, 2419, 2866 |
| AlwI | GGATC | 5 cut(s) | 474, 561, 2105, 2262, 3034 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 320 |
| Ama87I | CYCGRG | 1 cut(s) | 3068 |
| Aor13HI | TCCGGA | 1 cut(s) | 1076 |
| AoxI | GGCC | 7 cut(s) | 341, 766, 1084, 1288, 1451, 2490, 3174 |
| ApaI | GGGCCC | 1 cut(s) | 345 |
| ApoI | RAATTY | 2 cut(s) | 2294, 3127 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 151, 183, 3056, 3088 |
| AseI | ATTAAT | 1 cut(s) | 2559 |
| AsiGI | ACCGGT | 2 cut(s) | 2550, 3032 |
| AspLEI | GCGC | 2 cut(s) | 1051, 1527 |
| AspS9I | GGNCC | 9 cut(s) | 341, 342, 766, 814, 848, 912, 1300, 1538, 1610 |
| AsuC2I | CCSGG | 1 cut(s) | 273 |
| AsuHPI | GGTGA | 5 cut(s) | 671, 2043, 2398, 2540, 2891 |
| AsuII | TTCGAA | 1 cut(s) | 2867 |
| AsuNHI | GCTAGC | 2 cut(s) | 2399, 3142 |
| AvaI | CYCGRG | 1 cut(s) | 3068 |
| AvaII | GGWCC | 6 cut(s) | 814, 848, 912, 1300, 1538, 1610 |
| AxyI | CCTNAGG | 1 cut(s) | 1614 |
| BaeGI | GKGCMC | 1 cut(s) | 345 |
| BanII | GRGCYC | 2 cut(s) | 345, 3276 |
| BbrPI | CACGTG | 1 cut(s) | 841 |
| BbsI | GAAGAC | 2 cut(s) | 1357, 2746 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 497, 531, 1504, 1538 |
| BciT130I | CCWGG | 6 cut(s) | 445, 1418, 1563, 2971, 3099, 3173 |
| BciVI | GTATCC | 3 cut(s) | 141, 1140, 3143 |
| BclI | TGATCA | 1 cut(s) | 963 |
| BcnI | CCSGG | 1 cut(s) | 273 |
| BcoDI | GTCTC | 5 cut(s) | 106, 1209, 2006, 2419, 2866 |
| BfmI | CTRYAG | 6 cut(s) | 666, 1878, 1971, 2154, 2937, 3213 |
| BfuAI | ACCTGC | 3 cut(s) | 286, 1871, 3147 |
| BfuI | GTATCC | 3 cut(s) | 141, 1140, 3143 |
| BlpI | GCTNAGC | 1 cut(s) | 245 |
| Bme1390I | CCNGG | 7 cut(s) | 273, 445, 1418, 1563, 2971, 3099, 3173 |
| Bme18I | GGWCC | 6 cut(s) | 814, 848, 912, 1300, 1538, 1610 |
| BmeT110I | CYCGRG | 1 cut(s) | 3068 |
| BmgBI | CACGTC | 1 cut(s) | 1995 |
| BmgT120I | GGNCC | 9 cut(s) | 341, 342, 766, 814, 848, 912, 1300, 1538, 1610 |
| BmiI | GGNNCC | 7 cut(s) | 342, 343, 344, 1301, 1422, 1611, 3183 |
| BmrFI | CCNGG | 7 cut(s) | 273, 445, 1418, 1563, 2971, 3099, 3173 |
| BmrI | ACTGGG | 1 cut(s) | 1385 |
| BmsI | GCATC | 5 cut(s) | 123, 241, 1161, 2689, 2938 |
| BmtI | GCTAGC | 2 cut(s) | 2403, 3146 |
| BmuI | ACTGGG | 1 cut(s) | 1385 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1322 |
| BpiI | GAAGAC | 2 cut(s) | 1357, 2746 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2075, 2107 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 245 |
| Bpu14I | TTCGAA | 1 cut(s) | 2867 |
| BpuEI | CTTGAG | 2 cut(s) | 221, 1313 |
| BpuMI | CCSGG | 1 cut(s) | 273 |
| Bsa29I | ATCGAT | 1 cut(s) | 219 |
| BsaAI | YACGTR | 2 cut(s) | 357, 841 |
| BsaI | GGTCTC | 2 cut(s) | 2006, 2419 |
| BsaJI | CCNNGG | 8 cut(s) | 762, 1698, 1751, 2409, 3005, 3097, 3171, 3177 |
| BsaWI | WCCGGW | 6 cut(s) | 163, 1076, 2550, 2570, 2614, 3032 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 145, 175 |
| Bse118I | RCCGGY | 2 cut(s) | 2550, 3032 |
| Bse1I | ACTGG | 4 cut(s) | 458, 1380, 2858, 3075 |
| Bse21I | CCTNAGG | 1 cut(s) | 1614 |
| Bse3DI | GCAATG | 5 cut(s) | 749, 1273, 2312, 2334, 2779 |
| BseAI | TCCGGA | 1 cut(s) | 1076 |
| BseBI | CCWGG | 6 cut(s) | 445, 1418, 1563, 2971, 3099, 3173 |
| BseCI | ATCGAT | 1 cut(s) | 219 |
| BseDI | CCNNGG | 8 cut(s) | 762, 1698, 1751, 2409, 3005, 3097, 3171, 3177 |
| BseGI | GGATG | 9 cut(s) | 147, 212, 1176, 1348, 1524, 1807, 1993, 2795, 2994 |
| BseMI | GCAATG | 5 cut(s) | 749, 1273, 2312, 2334, 2779 |
| BseMII | CTCAG | 4 cut(s) | 236, 1202, 1605, 2073 |
| BseNI | ACTGG | 4 cut(s) | 458, 1380, 2858, 3075 |
| BseRI | GAGGAG | 3 cut(s) | 242, 413, 1575 |
| BseSI | GKGCMC | 1 cut(s) | 345 |
| BseX3I | CGGCCG | 1 cut(s) | 2490 |
| Bsh1236I | CGCG | 2 cut(s) | 74, 172 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2493 |
| BshFI | GGCC | 7 cut(s) | 343, 768, 1086, 1290, 1453, 2492, 3176 |
| BshTI | ACCGGT | 2 cut(s) | 2550, 3032 |
| BshVI | ATCGAT | 1 cut(s) | 219 |
| BsiEI | CGRYCG | 1 cut(s) | 2493 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3068 |
| BsiSI | CCGG | 8 cut(s) | 164, 272, 1077, 1454, 2551, 2571, 2615, 3033 |
| BsiWI | CGTACG | 1 cut(s) | 353 |
| BslFI | GGGAC | 4 cut(s) | 1313, 1623, 1860, 2939 |
| BsmAI | GTCTC | 5 cut(s) | 106, 1209, 2006, 2419, 2866 |
| BsmBI | CGTCTC | 1 cut(s) | 106 |
| BsmFI | GGGAC | 4 cut(s) | 1313, 1623, 1860, 2939 |
| BsmI | GAATGC | 4 cut(s) | 252, 481, 1527, 2669 |
| BsnI | GGCC | 7 cut(s) | 343, 768, 1086, 1290, 1453, 2492, 3176 |
| Bso31I | GGTCTC | 2 cut(s) | 2006, 2419 |
| BsoBI | CYCGRG | 1 cut(s) | 3068 |
| Bsp119I | TTCGAA | 1 cut(s) | 2867 |
| Bsp120I | GGGCCC | 1 cut(s) | 341 |
| Bsp1286I | GDGCHC | 2 cut(s) | 345, 3276 |
| Bsp13I | TCCGGA | 1 cut(s) | 1076 |
| Bsp1407I | TGTACA | 4 cut(s) | 1242, 2022, 2246, 2500 |
| Bsp143I | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 245 |
| Bsp19I | CCATGG | 2 cut(s) | 1698, 2409 |
| BspACI | CCGC | 8 cut(s) | 74, 249, 282, 338, 1763, 2489, 2493, 2779 |
| BspANI | GGCC | 7 cut(s) | 343, 768, 1086, 1290, 1453, 2492, 3176 |
| BspCNI | CTCAG | 4 cut(s) | 237, 1201, 1606, 2074 |
| BspDI | ATCGAT | 1 cut(s) | 219 |
| BspEI | TCCGGA | 1 cut(s) | 1076 |
| BspFNI | CGCG | 2 cut(s) | 74, 172 |
| BspHI | TCATGA | 1 cut(s) | 117 |
| BspLI | GGNNCC | 7 cut(s) | 342, 343, 344, 1301, 1422, 1611, 3183 |
| BspMAI | CTGCAG | 4 cut(s) | 670, 1882, 2158, 2941 |
| BspMI | ACCTGC | 3 cut(s) | 286, 1871, 3147 |
| BspOI | GCTAGC | 2 cut(s) | 2403, 3146 |
| BspPI | GGATC | 5 cut(s) | 474, 561, 2105, 2262, 3034 |
| BspT104I | TTCGAA | 1 cut(s) | 2867 |
| BspTNI | GGTCTC | 2 cut(s) | 2006, 2419 |
| BsrBI | CCGCTC | 2 cut(s) | 249, 2781 |
| BsrDI | GCAATG | 5 cut(s) | 749, 1273, 2312, 2334, 2779 |
| BsrFI | RCCGGY | 2 cut(s) | 2550, 3032 |
| BsrGI | TGTACA | 4 cut(s) | 1242, 2022, 2246, 2500 |
| BsrI | ACTGG | 4 cut(s) | 458, 1380, 2858, 3075 |
| BssAI | RCCGGY | 2 cut(s) | 2550, 3032 |
| BssECI | CCNNGG | 8 cut(s) | 762, 1698, 1751, 2409, 3005, 3097, 3171, 3177 |
| BssMI | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| BssT1I | CCWWGG | 5 cut(s) | 762, 1698, 1751, 2409, 3177 |
| Bst2UI | CCWGG | 6 cut(s) | 445, 1418, 1563, 2971, 3099, 3173 |
| Bst6I | CTCTTC | 3 cut(s) | 381, 2869, 3172 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1947, 2636 |
| BstAUI | TGTACA | 4 cut(s) | 1242, 2022, 2246, 2500 |
| BstBAI | YACGTR | 2 cut(s) | 357, 841 |
| BstBI | TTCGAA | 1 cut(s) | 2867 |
| BstC8I | GCNNGC | 6 cut(s) | 174, 1088, 1581, 1952, 2401, 3144 |
| BstDEI | CTNAG | 6 cut(s) | 245, 1061, 1188, 1614, 2082, 2282 |
| BstDSI | CCRYGG | 3 cut(s) | 1698, 2409, 3005 |
| BstF5I | GGATG | 9 cut(s) | 147, 212, 1176, 1348, 1524, 1807, 1993, 2795, 2994 |
| BstFNI | CGCG | 2 cut(s) | 74, 172 |
| BstHHI | GCGC | 2 cut(s) | 1051, 1527 |
| BstKTI | GATC | 9 cut(s) | 219, 305, 469, 556, 966, 2113, 2257, 2346, 3042 |
| BstMAI | GTCTC | 5 cut(s) | 106, 1209, 2006, 2419, 2866 |
| BstMBI | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| BstMCI | CGRYCG | 1 cut(s) | 2493 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 335, 349, 665, 1947, 1956, 2636, 2778, 3225 |
| BstNI | CCWGG | 6 cut(s) | 445, 1418, 1563, 2971, 3099, 3173 |
| BstNSI | RCATGY | 5 cut(s) | 130, 518, 1205, 1260, 1624 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1322 |
| BstSCI | CCNGG | 7 cut(s) | 271, 443, 1416, 1561, 2969, 3097, 3171 |
| BstSFI | CTRYAG | 6 cut(s) | 666, 1878, 1971, 2154, 2937, 3213 |
| BstSLI | GKGCMC | 1 cut(s) | 345 |
| BstSNI | TACGTA | 1 cut(s) | 357 |
| BstUI | CGCG | 2 cut(s) | 74, 172 |
| BstV2I | GAAGAC | 2 cut(s) | 1357, 2746 |
| BstX2I | RGATCY | 3 cut(s) | 466, 2110, 2254 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1843, 2061, 2647 |
| BstYI | RGATCY | 3 cut(s) | 466, 2110, 2254 |
| BstZI | CGGCCG | 1 cut(s) | 2490 |
| Bsu15I | ATCGAT | 1 cut(s) | 219 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1614 |
| BsuI | GTATCC | 3 cut(s) | 141, 1140, 3143 |
| BsuRI | GGCC | 7 cut(s) | 343, 768, 1086, 1290, 1453, 2492, 3176 |
| BsuTUI | ATCGAT | 1 cut(s) | 219 |
| BtgI | CCRYGG | 3 cut(s) | 1698, 2409, 3005 |
| BtrI | CACGTC | 1 cut(s) | 1995 |
| BtsCI | GGATG | 9 cut(s) | 147, 212, 1176, 1348, 1524, 1807, 1993, 2795, 2994 |
| BtsI | GCAGTG | 4 cut(s) | 38, 1251, 2151, 3057 |
| BtsIMutI | CAGTG | 5 cut(s) | 38, 1251, 1326, 2151, 3057 |
| BveI | ACCTGC | 3 cut(s) | 286, 1871, 3147 |
| Cac8I | GCNNGC | 6 cut(s) | 174, 1088, 1581, 1952, 2401, 3144 |
| CaiI | CAGNNNCTG | 1 cut(s) | 320 |
| CciI | TCATGA | 1 cut(s) | 117 |
| CciNI | GCGGCCGC | 1 cut(s) | 2490 |
| CfoI | GCGC | 2 cut(s) | 1051, 1527 |
| Cfr10I | RCCGGY | 2 cut(s) | 2550, 3032 |
| Cfr13I | GGNCC | 9 cut(s) | 341, 342, 766, 814, 848, 912, 1300, 1538, 1610 |
| ClaI | ATCGAT | 1 cut(s) | 219 |
| CspAI | ACCGGT | 2 cut(s) | 2550, 3032 |
| DdeI | CTNAG | 6 cut(s) | 245, 1061, 1188, 1614, 2082, 2282 |
| DpnI | GATC | 9 cut(s) | 218, 304, 468, 555, 965, 2112, 2256, 2345, 3041 |
| DpnII | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| DraI | TTTAAA | 1 cut(s) | 19 |
| EaeI | YGGCCR | 2 cut(s) | 1451, 2490 |
| EagI | CGGCCG | 1 cut(s) | 2490 |
| Eam1104I | CTCTTC | 3 cut(s) | 381, 2869, 3172 |
| EarI | CTCTTC | 3 cut(s) | 381, 2869, 3172 |
| EclXI | CGGCCG | 1 cut(s) | 2490 |
| Eco105I | TACGTA | 1 cut(s) | 357 |
| Eco130I | CCWWGG | 5 cut(s) | 762, 1698, 1751, 2409, 3177 |
| Eco24I | GRGCYC | 2 cut(s) | 345, 3276 |
| Eco31I | GGTCTC | 2 cut(s) | 2006, 2419 |
| Eco32I | GATATC | 1 cut(s) | 2469 |
| Eco47I | GGWCC | 6 cut(s) | 814, 848, 912, 1300, 1538, 1610 |
| Eco52I | CGGCCG | 1 cut(s) | 2490 |
| Eco57I | CTGAAG | 2 cut(s) | 405, 2856 |
| Eco72I | CACGTG | 1 cut(s) | 841 |
| Eco81I | CCTNAGG | 1 cut(s) | 1614 |
| Eco88I | CYCGRG | 1 cut(s) | 3068 |
| EcoO109I | RGGNCCY | 4 cut(s) | 341, 342, 1300, 1610 |
| EcoRII | CCWGG | 6 cut(s) | 443, 1416, 1561, 2969, 3097, 3171 |
| EcoRV | GATATC | 1 cut(s) | 2469 |
| EcoT14I | CCWWGG | 5 cut(s) | 762, 1698, 1751, 2409, 3177 |
| EcoT38I | GRGCYC | 2 cut(s) | 345, 3276 |
| ErhI | CCWWGG | 5 cut(s) | 762, 1698, 1751, 2409, 3177 |
| Esp3I | CGTCTC | 1 cut(s) | 106 |
| FaqI | GGGAC | 4 cut(s) | 1313, 1623, 1860, 2939 |
| FauI | CCCGC | 2 cut(s) | 67, 331 |
| FbaI | TGATCA | 1 cut(s) | 963 |
| FblI | GTMKAC | 1 cut(s) | 1071 |
| FokI | GGATG | 9 cut(s) | 134, 219, 1183, 1355, 1531, 1794, 2000, 2782, 3001 |
| FriOI | GRGCYC | 2 cut(s) | 345, 3276 |
| FspAI | RTGCGCAY | 1 cut(s) | 1526 |
| FspI | TGCGCA | 1 cut(s) | 1526 |
| GlaI | GCGC | 2 cut(s) | 1050, 1526 |
| HaeIII | GGCC | 7 cut(s) | 343, 768, 1086, 1290, 1453, 2492, 3176 |
| HapII | CCGG | 8 cut(s) | 164, 272, 1077, 1454, 2551, 2571, 2615, 3033 |
| HhaI | GCGC | 2 cut(s) | 1051, 1527 |
| Hin6I | GCGC | 2 cut(s) | 1049, 1525 |
| HinP1I | GCGC | 2 cut(s) | 1049, 1525 |
| HincII | GTYRAC | 2 cut(s) | 532, 2789 |
| HindII | GTYRAC | 2 cut(s) | 532, 2789 |
| HindIII | AAGCTT | 3 cut(s) | 369, 1840, 1952 |
| HpaII | CCGG | 8 cut(s) | 164, 272, 1077, 1454, 2551, 2571, 2615, 3033 |
| HphI | GGTGA | 5 cut(s) | 671, 2043, 2398, 2540, 2891 |
| Hpy166II | GTNNAC | 6 cut(s) | 459, 532, 1072, 1245, 2548, 2789 |
| Hpy8I | GTNNAC | 6 cut(s) | 459, 532, 1072, 1245, 2548, 2789 |
| Hpy99I | CGWCG | 2 cut(s) | 50, 160 |
| HpyCH4IV | ACGT | 5 cut(s) | 122, 356, 840, 1994, 3239 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 335, 349, 665, 1947, 1956, 2636, 2778, 3225 |
| HpyF3I | CTNAG | 6 cut(s) | 245, 1061, 1188, 1614, 2082, 2282 |
| HpySE526I | ACGT | 5 cut(s) | 122, 356, 840, 1994, 3239 |
| HspAI | GCGC | 2 cut(s) | 1049, 1525 |
| Kpn2I | TCCGGA | 1 cut(s) | 1076 |
| Ksp22I | TGATCA | 1 cut(s) | 963 |
| Kzo9I | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| LmnI | GCTCC | 8 cut(s) | 229, 478, 1426, 1588, 2138, 2786, 2852, 3187 |
| LweI | GCATC | 5 cut(s) | 123, 241, 1161, 2689, 2938 |
| MaeII | ACGT | 5 cut(s) | 122, 356, 840, 1994, 3239 |
| MalI | GATC | 9 cut(s) | 218, 304, 468, 555, 965, 2112, 2256, 2345, 3041 |
| MbiI | CCGCTC | 2 cut(s) | 249, 2781 |
| MboI | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| MfeI | CAATTG | 4 cut(s) | 306, 708, 1162, 2528 |
| MflI | RGATCY | 3 cut(s) | 466, 2110, 2254 |
| MhlI | GDGCHC | 2 cut(s) | 345, 3276 |
| MlyI | GAGTC | 4 cut(s) | 154, 1067, 3080, 3130 |
| MmeI | TCCRAC | 3 cut(s) | 429, 1688, 2874 |
| MroI | TCCGGA | 1 cut(s) | 1076 |
| MseI | TTAA | 8 cut(s) | 18, 377, 420, 786, 1719, 2298, 2559, 2603 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1278, 1406, 2910, 3035 |
| MspA1I | CMGCKG | 2 cut(s) | 2159, 2495 |
| MspI | CCGG | 8 cut(s) | 164, 272, 1077, 1454, 2551, 2571, 2615, 3033 |
| MspR9I | CCNGG | 7 cut(s) | 273, 445, 1418, 1563, 2971, 3099, 3173 |
| MunI | CAATTG | 4 cut(s) | 306, 708, 1162, 2528 |
| Mva1269I | GAATGC | 4 cut(s) | 252, 481, 1527, 2669 |
| MvaI | CCWGG | 6 cut(s) | 445, 1418, 1563, 2971, 3099, 3173 |
| MvnI | CGCG | 2 cut(s) | 74, 172 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 335, 349, 665, 1947, 1956, 2636, 2778, 3225 |
| NciI | CCSGG | 1 cut(s) | 273 |
| NcoI | CCATGG | 2 cut(s) | 1698, 2409 |
| NdeII | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| NheI | GCTAGC | 2 cut(s) | 2399, 3142 |
| NlaIV | GGNNCC | 7 cut(s) | 342, 343, 344, 1301, 1422, 1611, 3183 |
| NmuCI | GTSAC | 8 cut(s) | 409, 635, 1324, 1408, 1507, 2149, 2711, 2958 |
| NotI | GCGGCCGC | 1 cut(s) | 2490 |
| NsbI | TGCGCA | 1 cut(s) | 1526 |
| NspI | RCATGY | 5 cut(s) | 130, 518, 1205, 1260, 1624 |
| NspV | TTCGAA | 1 cut(s) | 2867 |
| OliI | CACNNNNGTG | 1 cut(s) | 3035 |
| PagI | TCATGA | 1 cut(s) | 117 |
| PciI | ACATGT | 2 cut(s) | 126, 1201 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 51 |
| PctI | GAATGC | 4 cut(s) | 252, 481, 1527, 2669 |
| Pfl23II | CGTACG | 1 cut(s) | 353 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1430 |
| PfoI | TCCNGGA | 1 cut(s) | 271 |
| PinAI | ACCGGT | 2 cut(s) | 2550, 3032 |
| PleI | GAGTC | 4 cut(s) | 154, 1067, 3079, 3129 |
| PmaCI | CACGTG | 1 cut(s) | 841 |
| PmlI | CACGTG | 1 cut(s) | 841 |
| PpsI | GAGTC | 4 cut(s) | 154, 1067, 3079, 3129 |
| Ppu21I | YACGTR | 2 cut(s) | 357, 841 |
| PpuMI | RGGWCCY | 2 cut(s) | 1300, 1610 |
| PscI | ACATGT | 2 cut(s) | 126, 1201 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1322 |
| PshBI | ATTAAT | 1 cut(s) | 2559 |
| PsiI | TTATAA | 3 cut(s) | 894, 1782, 2684 |
| Psp5II | RGGWCCY | 2 cut(s) | 1300, 1610 |
| Psp6I | CCWGG | 6 cut(s) | 443, 1416, 1561, 2969, 3097, 3171 |
| PspCI | CACGTG | 1 cut(s) | 841 |
| PspGI | CCWGG | 6 cut(s) | 443, 1416, 1561, 2969, 3097, 3171 |
| PspLI | CGTACG | 1 cut(s) | 353 |
| PspN4I | GGNNCC | 7 cut(s) | 342, 343, 344, 1301, 1422, 1611, 3183 |
| PspOMI | GGGCCC | 1 cut(s) | 341 |
| PspPI | GGNCC | 9 cut(s) | 341, 342, 766, 814, 848, 912, 1300, 1538, 1610 |
| PspPPI | RGGWCCY | 2 cut(s) | 1300, 1610 |
| PstI | CTGCAG | 4 cut(s) | 670, 1882, 2158, 2941 |
| PstNI | CAGNNNCTG | 1 cut(s) | 320 |
| PsuI | RGATCY | 3 cut(s) | 466, 2110, 2254 |
| PvuII | CAGCTG | 1 cut(s) | 2159 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1278, 1406, 2910, 3035 |
| SaqAI | TTAA | 8 cut(s) | 18, 377, 420, 786, 1719, 2298, 2559, 2603 |
| Sau3AI | GATC | 9 cut(s) | 216, 302, 466, 553, 963, 2110, 2254, 2343, 3039 |
| Sau96I | GGNCC | 9 cut(s) | 341, 342, 766, 814, 848, 912, 1300, 1538, 1610 |
| SchI | GAGTC | 4 cut(s) | 154, 1067, 3080, 3130 |
| ScrFI | CCNGG | 7 cut(s) | 273, 445, 1418, 1563, 2971, 3099, 3173 |
| SduI | GDGCHC | 2 cut(s) | 345, 3276 |
| SfaNI | GCATC | 5 cut(s) | 123, 241, 1161, 2689, 2938 |
| SfcI | CTRYAG | 6 cut(s) | 666, 1878, 1971, 2154, 2937, 3213 |
| SfuI | TTCGAA | 1 cut(s) | 2867 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3032 |
| SinI | GGWCC | 6 cut(s) | 814, 848, 912, 1300, 1538, 1610 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1278, 1406, 2910, 3035 |
| SmlI | CTYRAG | 2 cut(s) | 236, 1292 |
| SmoI | CTYRAG | 2 cut(s) | 236, 1292 |
| SnaBI | TACGTA | 1 cut(s) | 357 |
| SsiI | CCGC | 8 cut(s) | 74, 249, 282, 338, 1763, 2489, 2493, 2779 |
| SspI | AATATT | 1 cut(s) | 2827 |
| StyD4I | CCNGG | 7 cut(s) | 271, 443, 1416, 1561, 2969, 3097, 3171 |
| StyI | CCWWGG | 5 cut(s) | 762, 1698, 1751, 2409, 3177 |
| TaiI | ACGT | 5 cut(s) | 125, 359, 843, 1997, 3242 |
| TaqII | GACCGA | 1 cut(s) | 2663 |
| TatI | WGTACW | 5 cut(s) | 971, 1242, 2022, 2246, 2500 |
| TauI | GCSGC | 4 cut(s) | 252, 1765, 2492, 2495 |
| Tru1I | TTAA | 8 cut(s) | 18, 377, 420, 786, 1719, 2298, 2559, 2603 |
| Tru9I | TTAA | 8 cut(s) | 18, 377, 420, 786, 1719, 2298, 2559, 2603 |
| TscAI | CASTG | 5 cut(s) | 45, 1258, 1333, 2158, 3064 |
| TseFI | GTSAC | 8 cut(s) | 409, 635, 1324, 1408, 1507, 2149, 2711, 2958 |
| Tsp45I | GTSAC | 8 cut(s) | 409, 635, 1324, 1408, 1507, 2149, 2711, 2958 |
| TspGWI | ACGGA | 1 cut(s) | 3268 |
| TspRI | CASTG | 5 cut(s) | 45, 1258, 1333, 2158, 3064 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1430 |
| VpaK11BI | GGWCC | 6 cut(s) | 814, 848, 912, 1300, 1538, 1610 |
| VspI | ATTAAT | 1 cut(s) | 2559 |
| XapI | RAATTY | 2 cut(s) | 2294, 3127 |
| XceI | RCATGY | 5 cut(s) | 130, 518, 1205, 1260, 1624 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2909, 3082 |
| XmiI | GTMKAC | 1 cut(s) | 1071 |