Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0010488

Physical Location & Seq

Genomic Coordinates Forward (+)

1608673 .. 1612373

Gene Structure 3701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1021500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGAAGCTCAAGAGCGAGCTCAGCTCTTTCCCCACGGCGAACAAGCTGCTGAAGTTCGCTCTGATCGGTCTCATTGGGTGCCTGGGCTTGCTCTGTTTGTACTACGGGTGGTCTTTCGGGCCGGGCTCCCGGAGATCCGACGAGGAGGCTTCTGGGTCCGATGGAGTCGACCCGCTTTTCGGCGGGTTCGTTCTCCATCACGATTTGGATGATTTGCATGACGACCAGGAGCACAACTCTGAGGTCCCCAAAAGCTTGCCTATATGCGATTTACGGTTTTCGGAGTTGATACCTTGTCTGGATAGAAACCTTATTTACCAACTGAGATTAAAGCCGAATTTGACGTTAATGGAGCATTACGAACGGCACTGCCCGCCTCCAGAGCGGCGTTATAATTGCTTGATACCGCCCCCACTTGGTTATAAGATACCTATAAGATGGCCGGCAAGTAGAGATGAAGTGTGGAAGGCCAACATTCCCCACACCCATCTTGCTCAAGAGAAATCAGATCAGAATTGGATGGTTGTGAATGGGGACAAGATCAATTTTCCGGGTGGCGGGACGCATTTCCATGATGGAGCTGATAAGTACATTGTTGCTCTTTCCAGGATGCTTAAATTTCCTGGTGATAAATTCAACAATGGTGGAAATATCCGTAATGTTCTCGATGTGGGTTGTGGAGTTGCGAGTTTTGGGGCATATCTTCTTTCTCATGATGTCATAGCTCTGTCCCTTGCTCCAAATGATGTGCATGAGAATCAAATACAATTTGCACTAGAGAGGGGCATTCCCTCTACTCTTGGTATCTTGGGTACAAAAAGACTTACTTATCCAAGCAGATCATTTGAGCTGGCTCATTGCTCTCGGTGTCGAATAGATTGGCTTCAAAGAGATGGAATCCTGTTATTAGAGCTGGACAGATTACTAAGACCTGGAGGGTATTTTGTGTACACTTCTCCTGAAGCATATGCAAATGATCCGGAAAATCGGAGGATCTGGAATGCTATGTATGATCTTCTGAAAAGAATGTGCTGGAGAGTTGTAACAAAGAAAGAGCAGAGTGTTGTATGGGCCAAGCCACTGACTAATAGTTGTTACTTAAAGAGAGATTCTAGGACCCGGCCCCCTCTGTGCGATTCCAAGGATGACCCTGATGCAAGTTGGAATGTGAGCATGAAGGTGTGCATTTCTCGATACACTTCAAAGATGCACAAGGAAAAAGGAAGTGGGCTAGCTCCTTGGCCACAGAGGCTTACCGCTGCACCGCCTCGGCTGGAAGAAATTGGTGTCAGTCCTGAAGAATTCCAAGAGGACACTAGCATATGGCACTTCAGAGTGATTGAGTACTGGAAGCAGATGAAGTCTGTCATACAGAAAAATTCAATTAGAAATGTCATGGATATGAACTCATACCTTGGTGGATTTGCTGCTGCCCTGAATGAAAAAGACGTCTGGGTGATGAATGTTGCTCCTGTCCATGTATCTGCCAGACTCAAGATCATCTTTGATCGAGGCTTAATTGGAACTGTTCATGACTGGTGTGAAGCATTTTCTACGTATCCACGTACATATGACCTTCTACATGCGTGGGAAGTATTCTCAGAGATTGATGAGCGGGGGTGCAGTACAGAGGATCTATTGATTGAAATGGATAGGATACTCAGACCAGATGGGTTTGCCATCATAAGAGACAAACCTGCTGTTATAAACTATATTCGAAAGTTTCTGACTGCCTTGAAATGGGATGGCTGGTTATCAGAAGTAGAACCACGGGTTGATGCTCTTTCCTCAAGGGATGAAGGAGTTTTGATTGCTAGAAAGAAGTTGTGGGATGAGGGGACTTCAGTAATATATATGCTAGATGCGGTATTGGTGCATAGCCCTGCCCGGTCGAAGAGAATGCATAGAAAGAGGAATGTCTTCAGTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009505 GO:0012505 GO:0016020 GO:0016740 GO:0016741 GO:0030312 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0097708 GO:0098588 GO:0098791 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

644

Amino Acids

73.62

Weight (kDa)

7.85

Isoelectric Point (pI)

47.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	95 - 607	1.1e-223	Putative S-adenosyl-L-methionine-dependent methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14430 AT5G14430
fragaria_vesca	FvH4_6g51950
malus_domestica	MD09G1021500.v1.1 MD17G1021500.v1.1
prunus_persica	Prupe.3G294800_v2.0.a1 Prupe.3G294800_v2.0.a1 Prupe.3G294800_v2.0.a1
pyrus_communis	pycom111g01790 pycom17g01860
rosa_chinensis	RchiOBHm_Chr2g0173431
rosa_laevigata	RLG00000022189
rosa_multiflora	Rmu_ssc0000282.1_g000015
rosa_roxburghii	Rroxscaffold_2G00078860
rosa_rugosa	Rorug02G0568600 Rorug02G0568700
rosa_samantha	Rh2AG648800 Rh2BG659400 Rh2CG624700 Rh2DG674600
rosa_wichuraiana	Rw2G053260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	393, 423, 1706
AatII	GACGTC	1 cut(s)	1452
Acc36I	ACCTGC	1 cut(s)	1705
AccB1I	GGYRCC	1 cut(s)	78
AccBSI	CCGCTC	2 cut(s)	385, 1615
AccI	GTMKAC	1 cut(s)	168
AccIII	TCCGGA	1 cut(s)	979
AclWI	GGATC	4 cut(s)	129, 971, 1001, 1641
AcoI	YGGCCR	2 cut(s)	440, 1241
AcsI	RAATTY	5 cut(s)	337, 617, 632, 1301, 1378
AcuI	CTGAAG	6 cut(s)	71, 981, 1315, 1317, 1827, 1906
AcyI	GRCGYC	1 cut(s)	1449
AfaI	GTAC	7 cut(s)	101, 590, 814, 950, 1346, 1567, 1627
AfiI	CCNNNNNNNGG	4 cut(s)	179, 416, 557, 1740
AgsI	TTSAA	6 cut(s)	637, 887, 1203, 1383, 1646, 1738
AjnI	CCWGG	5 cut(s)	81, 225, 605, 622, 931
Alw21I	GWGCWC	2 cut(s)	21, 234
Alw26I	GTCTC	2 cut(s)	74, 1683
AlwI	GGATC	4 cut(s)	129, 971, 1001, 1641
AlwNI	CAGNNNCTG	1 cut(s)	1929
Aor13HI	TCCGGA	1 cut(s)	979
AoxI	GGCC	6 cut(s)	119, 440, 468, 1071, 1121, 1241
ApeKI	GCWGC	4 cut(s)	46, 1259, 1427, 1430
ApoI	RAATTY	5 cut(s)	337, 617, 632, 1301, 1378
ArsI	GACNNNNNNTTYG	2 cut(s)	161, 193
Asp700I	GAANNNNTTC	1 cut(s)	1919
AspS9I	GGNCC	6 cut(s)	119, 156, 244, 1071, 1116, 1122
AsuC2I	CCSGG	5 cut(s)	123, 130, 552, 1120, 1888
AsuHPI	GGTGA	2 cut(s)	638, 1468
AsuII	TTCGAA	1 cut(s)	1717
AsuNHI	GCTAGC	1 cut(s)	1231
AvaII	GGWCC	3 cut(s)	156, 244, 1116
BalI	TGGCCA	1 cut(s)	1243
BanI	GGYRCC	1 cut(s)	78
BanII	GRGCYC	2 cut(s)	21, 128
BbsI	GAAGAC	1 cut(s)	1912
Bbv12I	GWGCWC	2 cut(s)	21, 234
BbvI	GCAGC	4 cut(s)	33, 1246, 1414, 1417
BceAI	ACGGC	2 cut(s)	51, 380
BcgI	CGANNNNNNTGC	4 cut(s)	28, 62, 1882, 1916
BciT130I	CCWGG	5 cut(s)	83, 227, 607, 624, 933
BciVI	GTATCC	2 cut(s)	1569, 1650
BcnI	CCSGG	5 cut(s)	123, 130, 552, 1120, 1888
BcoDI	GTCTC	2 cut(s)	74, 1683
BfaI	CTAG	6 cut(s)	776, 1113, 1232, 1317, 1815, 1859
BfuAI	ACCTGC	1 cut(s)	1705
BfuI	GTATCC	2 cut(s)	1569, 1650
BglI	GCCNNNNNGGC	1 cut(s)	1249
BisI	GCNGC	5 cut(s)	47, 386, 1260, 1428, 1431
BlpI	GCTNAGC	1 cut(s)	20
BlsI	GCNGC	5 cut(s)	48, 387, 1261, 1429, 1432
BmcAI	AGTACT	1 cut(s)	1346
Bme18I	GGWCC	3 cut(s)	156, 244, 1116
BmgT120I	GGNCC	6 cut(s)	119, 156, 244, 1071, 1116, 1122
BmiI	GGNNCC	6 cut(s)	80, 127, 157, 246, 1118, 1124
BmsI	GCATC	5 cut(s)	600, 1144, 1197, 1768, 1852
BmtI	GCTAGC	1 cut(s)	1235
BpiI	GAAGAC	1 cut(s)	1912
BplI	GAGNNNNNCTC	4 cut(s)	8, 40, 221, 253
BpmI	CTGGAG	3 cut(s)	363, 954, 1054
Bpu1102I	GCTNAGC	1 cut(s)	20
Bpu14I	TTCGAA	1 cut(s)	1717
BpuEI	CTTGAG	3 cut(s)	480, 1478, 1774
BpuMI	CCSGG	5 cut(s)	123, 130, 552, 1120, 1888
BsaAI	YACGTR	2 cut(s)	1557, 1565
BsaHI	GRCGYC	1 cut(s)	1449
BsaI	GGTCTC	1 cut(s)	74
BsaJI	CCNNGG	7 cut(s)	33, 82, 1140, 1238, 1268, 1414, 1769
BsaWI	WCCGGW	1 cut(s)	979
Bsc4I	CCNNNNNNNGG	4 cut(s)	179, 416, 557, 1740
Bse118I	RCCGGY	1 cut(s)	442
Bse1I	ACTGG	2 cut(s)	1352, 1541
Bse3DI	GCAATG	1 cut(s)	856
BseAI	TCCGGA	1 cut(s)	979
BseBI	CCWGG	5 cut(s)	83, 227, 607, 624, 933
BseDI	CCNNGG	7 cut(s)	33, 82, 1140, 1238, 1268, 1414, 1769
BseGI	GGATG	7 cut(s)	214, 525, 615, 1150, 1750, 1801, 1837
BseLI	CCNNNNNNNGG	4 cut(s)	179, 416, 557, 1740
BseMI	GCAATG	1 cut(s)	856
BseMII	CTCAG	5 cut(s)	34, 231, 314, 1614, 1675
BseNI	ACTGG	2 cut(s)	1352, 1541
BseRI	GAGGAG	1 cut(s)	158
BseXI	GCAGC	4 cut(s)	33, 1246, 1414, 1417
BsgI	GTGCAG	2 cut(s)	1245, 1642
Bsh1285I	CGRYCG	1 cut(s)	1892
BshFI	GGCC	6 cut(s)	121, 442, 470, 1073, 1123, 1243
BshNI	GGYRCC	1 cut(s)	78
BsiEI	CGRYCG	1 cut(s)	1892
BsiHKAI	GWGCWC	2 cut(s)	21, 234
BsiSI	CCGG	7 cut(s)	122, 130, 443, 551, 980, 1120, 1888
BslFI	GGGAC	5 cut(s)	230, 548, 574, 715, 1852
BslI	CCNNNNNNNGG	4 cut(s)	179, 416, 557, 1740
BsmAI	GTCTC	2 cut(s)	74, 1683
BsmFI	GGGAC	5 cut(s)	230, 548, 574, 715, 1852
BsmI	GAATGC	3 cut(s)	786, 1006, 1905
BsnI	GGCC	6 cut(s)	121, 442, 470, 1073, 1123, 1243
Bso31I	GGTCTC	1 cut(s)	74
Bsp119I	TTCGAA	1 cut(s)	1717
Bsp1286I	GDGCHC	3 cut(s)	21, 128, 234
Bsp13I	TCCGGA	1 cut(s)	979
Bsp1407I	TGTACA	1 cut(s)	948
Bsp1720I	GCTNAGC	1 cut(s)	20
BspANI	GGCC	6 cut(s)	121, 442, 470, 1073, 1123, 1243
BspCNI	CTCAG	5 cut(s)	33, 232, 315, 1613, 1674
BspEI	TCCGGA	1 cut(s)	979
BspHI	TCATGA	2 cut(s)	712, 1531
BspLI	GGNNCC	6 cut(s)	80, 127, 157, 246, 1118, 1124
BspMI	ACCTGC	1 cut(s)	1705
BspOI	GCTAGC	1 cut(s)	1235
BspPI	GGATC	4 cut(s)	129, 971, 1001, 1641
BspT104I	TTCGAA	1 cut(s)	1717
BspT107I	GGYRCC	1 cut(s)	78
BspTNI	GGTCTC	1 cut(s)	74
BsrBI	CCGCTC	2 cut(s)	385, 1615
BsrDI	GCAATG	1 cut(s)	856
BsrFI	RCCGGY	1 cut(s)	442
BsrGI	TGTACA	1 cut(s)	948
BsrI	ACTGG	2 cut(s)	1352, 1541
BssAI	RCCGGY	1 cut(s)	442
BssECI	CCNNGG	7 cut(s)	33, 82, 1140, 1238, 1268, 1414, 1769
BssNI	GRCGYC	1 cut(s)	1449
BssT1I	CCWWGG	3 cut(s)	1140, 1238, 1414
Bst2UI	CCWGG	5 cut(s)	83, 227, 607, 624, 933
Bst4CI	ACNGT	2 cut(s)	276, 1528
Bst6I	CTCTTC	1 cut(s)	1889
BstACI	GRCGYC	1 cut(s)	1449
BstAUI	TGTACA	1 cut(s)	948
BstBAI	YACGTR	2 cut(s)	1557, 1565
BstBI	TTCGAA	1 cut(s)	1717
BstC8I	GCNNGC	7 cut(s)	17, 89, 257, 374, 444, 852, 1233
BstDEI	CTNAG	6 cut(s)	20, 240, 323, 926, 1600, 1661
BstDSI	CCRYGG	2 cut(s)	33, 1769
BstF5I	GGATG	7 cut(s)	214, 525, 615, 1150, 1750, 1801, 1837
BstMAI	GTCTC	2 cut(s)	74, 1683
BstMCI	CGRYCG	1 cut(s)	1892
BstMWI	GCNNNNNNNGC	4 cut(s)	21, 373, 382, 1249
BstNI	CCWGG	5 cut(s)	83, 227, 607, 624, 933
BstNSI	RCATGY	1 cut(s)	1586
BstSNI	TACGTA	1 cut(s)	1557
BstV1I	GCAGC	4 cut(s)	33, 1246, 1414, 1417
BstV2I	GAAGAC	1 cut(s)	1912
BstX2I	RGATCY	3 cut(s)	134, 993, 1633
BstYI	RGATCY	3 cut(s)	134, 993, 1633
BsuI	GTATCC	2 cut(s)	1569, 1650
BsuRI	GGCC	6 cut(s)	121, 442, 470, 1073, 1123, 1243
BtgI	CCRYGG	2 cut(s)	33, 1769
BtsCI	GGATG	7 cut(s)	214, 525, 615, 1150, 1750, 1801, 1837
BtsI	GCAGTG	1 cut(s)	367
BtsIMutI	CAGTG	2 cut(s)	367, 1079
BveI	ACCTGC	1 cut(s)	1705
Cac8I	GCNNGC	7 cut(s)	17, 89, 257, 374, 444, 852, 1233
CaiI	CAGNNNCTG	1 cut(s)	1929
CciI	TCATGA	2 cut(s)	712, 1531
Cfr10I	RCCGGY	1 cut(s)	442
Cfr13I	GGNCC	6 cut(s)	119, 156, 244, 1071, 1116, 1122
CseI	GACGC	1 cut(s)	571
Csp6I	GTAC	7 cut(s)	100, 589, 813, 949, 1345, 1566, 1626
CspCI	CAANNNNNGTGG	2 cut(s)	625, 660
CviAII	CATG	9 cut(s)	218, 572, 713, 752, 1174, 1396, 1478, 1532, 1583
CviQI	GTAC	7 cut(s)	100, 589, 813, 949, 1345, 1566, 1626
DdeI	CTNAG	6 cut(s)	20, 240, 323, 926, 1600, 1661
EaeI	YGGCCR	2 cut(s)	440, 1241
Eam1104I	CTCTTC	1 cut(s)	1889
EarI	CTCTTC	1 cut(s)	1889
Ecl136II	GAGCTC	1 cut(s)	19
Eco105I	TACGTA	1 cut(s)	1557
Eco130I	CCWWGG	3 cut(s)	1140, 1238, 1414
Eco24I	GRGCYC	2 cut(s)	21, 128
Eco31I	GGTCTC	1 cut(s)	74
Eco47I	GGWCC	3 cut(s)	156, 244, 1116
Eco53kI	GAGCTC	1 cut(s)	19
Eco57I	CTGAAG	6 cut(s)	71, 981, 1315, 1317, 1827, 1906
EcoICRI	GAGCTC	1 cut(s)	19
EcoO109I	RGGNCCY	2 cut(s)	244, 1116
EcoRI	GAATTC	1 cut(s)	1301
EcoRII	CCWGG	5 cut(s)	81, 225, 605, 622, 931
EcoT14I	CCWWGG	3 cut(s)	1140, 1238, 1414
EcoT22I	ATGCAT	1 cut(s)	1905
EcoT38I	GRGCYC	2 cut(s)	21, 128
ErhI	CCWWGG	3 cut(s)	1140, 1238, 1414
FaeI	CATG	9 cut(s)	221, 575, 716, 755, 1177, 1399, 1481, 1535, 1586
FalI	AAGNNNNNCTT	4 cut(s)	811, 843, 1487, 1519
FaqI	GGGAC	5 cut(s)	230, 548, 574, 715, 1852
FatI	CATG	9 cut(s)	217, 571, 712, 751, 1173, 1395, 1477, 1531, 1582
FauI	CCCGC	5 cut(s)	176, 180, 381, 551, 1608
FauNDI	CATATG	3 cut(s)	967, 1322, 1570
FblI	GTMKAC	1 cut(s)	168
Fnu4HI	GCNGC	5 cut(s)	47, 386, 1260, 1428, 1431
FokI	GGATG	7 cut(s)	221, 532, 622, 1157, 1757, 1808, 1844
FriOI	GRGCYC	2 cut(s)	21, 128
Fsp4HI	GCNGC	5 cut(s)	47, 386, 1260, 1428, 1431
FspBI	CTAG	6 cut(s)	776, 1113, 1232, 1317, 1815, 1859
GluI	GCNGC	5 cut(s)	47, 386, 1260, 1428, 1431
GsuI	CTGGAG	3 cut(s)	363, 954, 1054
HaeIII	GGCC	6 cut(s)	121, 442, 470, 1073, 1123, 1243
HapII	CCGG	7 cut(s)	122, 130, 443, 551, 980, 1120, 1888
HgaI	GACGC	1 cut(s)	571
Hin1I	GRCGYC	1 cut(s)	1449
Hin1II	CATG	9 cut(s)	221, 575, 716, 755, 1177, 1399, 1481, 1535, 1586
HincII	GTYRAC	1 cut(s)	169
HindII	GTYRAC	1 cut(s)	169
HindIII	AAGCTT	1 cut(s)	253
HinfI	GANTC	6 cut(s)	165, 757, 897, 1109, 1136, 1491
HpaII	CCGG	7 cut(s)	122, 130, 443, 551, 980, 1120, 1888
HphI	GGTGA	2 cut(s)	638, 1468
Hpy166II	GTNNAC	3 cut(s)	169, 949, 951
Hpy8I	GTNNAC	3 cut(s)	169, 949, 951
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	4 cut(s)	460, 1171, 1586, 1793
HpyCH4III	ACNGT	2 cut(s)	276, 1528
HpyCH4IV	ACGT	4 cut(s)	344, 1449, 1556, 1564
HpyF10VI	GCNNNNNNNGC	4 cut(s)	21, 373, 382, 1249
HpyF3I	CTNAG	6 cut(s)	20, 240, 323, 926, 1600, 1661
HpySE526I	ACGT	4 cut(s)	344, 1449, 1556, 1564
Hsp92I	GRCGYC	1 cut(s)	1449
Hsp92II	CATG	9 cut(s)	221, 575, 716, 755, 1177, 1399, 1481, 1535, 1586
Kpn2I	TCCGGA	1 cut(s)	979
KroI	GCCGGC	1 cut(s)	442
KroNI	GCCGGC	1 cut(s)	444
LmnI	GCTCC	7 cut(s)	131, 229, 352, 578, 742, 1240, 1474
Lsp1109I	GCAGC	4 cut(s)	33, 1246, 1414, 1417
LweI	GCATC	5 cut(s)	600, 1144, 1197, 1768, 1852
MaeI	CTAG	6 cut(s)	776, 1113, 1232, 1317, 1815, 1859
MaeII	ACGT	4 cut(s)	344, 1449, 1556, 1564
MaeIII	GTNAC	3 cut(s)	1042, 1094, 1925
MbiI	CCGCTC	2 cut(s)	385, 1615
MboII	GAAGA	6 cut(s)	695, 1007, 1289, 1310, 1906, 1912
MflI	RGATCY	3 cut(s)	134, 993, 1633
MhlI	GDGCHC	3 cut(s)	21, 128, 234
MlsI	TGGCCA	1 cut(s)	1243
MluNI	TGGCCA	1 cut(s)	1243
MlyI	GAGTC	2 cut(s)	174, 1485
MmeI	TCCRAC	2 cut(s)	162, 1142
Mox20I	TGGCCA	1 cut(s)	1243
Mph1103I	ATGCAT	1 cut(s)	1905
MroI	TCCGGA	1 cut(s)	979
MroNI	GCCGGC	1 cut(s)	442
MroXI	GAANNNNTTC	1 cut(s)	1919
MscI	TGGCCA	1 cut(s)	1243
MseI	TTAA	5 cut(s)	329, 347, 615, 1100, 1517
MslI	CAYNNNNRTG	3 cut(s)	570, 1178, 1400
Msp20I	TGGCCA	1 cut(s)	1243
MspA1I	CMGCKG	1 cut(s)	1259
MspI	CCGG	7 cut(s)	122, 130, 443, 551, 980, 1120, 1888
Mva1269I	GAATGC	3 cut(s)	786, 1006, 1905
MvaI	CCWGG	5 cut(s)	83, 227, 607, 624, 933
MwoI	GCNNNNNNNGC	4 cut(s)	21, 373, 382, 1249
NaeI	GCCGGC	1 cut(s)	444
NciI	CCSGG	5 cut(s)	123, 130, 552, 1120, 1888
NdeI	CATATG	3 cut(s)	967, 1322, 1570
NgoMIV	GCCGGC	1 cut(s)	442
NheI	GCTAGC	1 cut(s)	1231
NlaIII	CATG	9 cut(s)	221, 575, 716, 755, 1177, 1399, 1481, 1535, 1586
NlaIV	GGNNCC	6 cut(s)	80, 127, 157, 246, 1118, 1124
NmeAIII	GCCGAG	1 cut(s)	1249
NsiI	ATGCAT	1 cut(s)	1905
NspI	RCATGY	1 cut(s)	1586
NspV	TTCGAA	1 cut(s)	1717
PagI	TCATGA	2 cut(s)	712, 1531
PcsI	WCGNNNNNNNCGW	1 cut(s)	186
PctI	GAATGC	3 cut(s)	786, 1006, 1905
PdiI	GCCGGC	1 cut(s)	444
PdmI	GAANNNNTTC	1 cut(s)	1919
PfeI	GAWTC	4 cut(s)	757, 897, 1109, 1136
PfoI	TCCNGGA	2 cut(s)	128, 605
PkrI	GCNGC	5 cut(s)	48, 387, 1261, 1429, 1432
PleI	GAGTC	2 cut(s)	173, 1485
PpsI	GAGTC	2 cut(s)	173, 1485
Ppu21I	YACGTR	2 cut(s)	1557, 1565
PpuMI	RGGWCCY	2 cut(s)	244, 1116
PsiI	TTATAA	3 cut(s)	393, 423, 1706
Psp124BI	GAGCTC	1 cut(s)	21
Psp5II	RGGWCCY	2 cut(s)	244, 1116
Psp6I	CCWGG	5 cut(s)	81, 225, 605, 622, 931
PspGI	CCWGG	5 cut(s)	81, 225, 605, 622, 931
PspN4I	GGNNCC	6 cut(s)	80, 127, 157, 246, 1118, 1124
PspPI	GGNCC	6 cut(s)	119, 156, 244, 1071, 1116, 1122
PspPPI	RGGWCCY	2 cut(s)	244, 1116
PstNI	CAGNNNCTG	1 cut(s)	1929
PsuI	RGATCY	3 cut(s)	134, 993, 1633
RsaI	GTAC	7 cut(s)	101, 590, 814, 950, 1346, 1567, 1627
RsaNI	GTAC	7 cut(s)	100, 589, 813, 949, 1345, 1566, 1626
RseI	CAYNNNNRTG	3 cut(s)	570, 1178, 1400
SacI	GAGCTC	1 cut(s)	21
SalI	GTCGAC	1 cut(s)	167
SaqAI	TTAA	5 cut(s)	329, 347, 615, 1100, 1517
SatI	GCNGC	5 cut(s)	47, 386, 1260, 1428, 1431
Sau96I	GGNCC	6 cut(s)	119, 156, 244, 1071, 1116, 1122
ScaI	AGTACT	1 cut(s)	1346
SchI	GAGTC	2 cut(s)	174, 1485
SduI	GDGCHC	3 cut(s)	21, 128, 234
SfaNI	GCATC	5 cut(s)	600, 1144, 1197, 1768, 1852
SfuI	TTCGAA	1 cut(s)	1717
SinI	GGWCC	3 cut(s)	156, 244, 1116
SmiMI	CAYNNNNRTG	3 cut(s)	570, 1178, 1400
SmlI	CTYRAG	4 cut(s)	8, 495, 1493, 1789
SmoI	CTYRAG	4 cut(s)	8, 495, 1493, 1789
SnaBI	TACGTA	1 cut(s)	1557
SspMI	CTAG	6 cut(s)	776, 1113, 1232, 1317, 1815, 1859
SstI	GAGCTC	1 cut(s)	21
StyI	CCWWGG	3 cut(s)	1140, 1238, 1414
TaaI	ACNGT	2 cut(s)	276, 1528
TaiI	ACGT	4 cut(s)	347, 1452, 1559, 1567
TaqI	TCGA	7 cut(s)	168, 666, 871, 1192, 1510, 1717, 1892
TaqII	GACCGA	1 cut(s)	56
TatI	WGTACW	5 cut(s)	99, 588, 948, 1344, 1625
TauI	GCSGC	1 cut(s)	388
TfiI	GAWTC	4 cut(s)	757, 897, 1109, 1136
Tru1I	TTAA	5 cut(s)	329, 347, 615, 1100, 1517
Tru9I	TTAA	5 cut(s)	329, 347, 615, 1100, 1517
TscAI	CASTG	2 cut(s)	374, 1086
TseI	GCWGC	4 cut(s)	46, 1259, 1427, 1430
TspDTI	ATGAA	9 cut(s)	17, 471, 1190, 1373, 1418, 1455, 1475, 1520, 1812
TspGWI	ACGGA	1 cut(s)	644
TspRI	CASTG	2 cut(s)	374, 1086
VpaK11BI	GGWCC	3 cut(s)	156, 244, 1116
XapI	RAATTY	5 cut(s)	337, 617, 632, 1301, 1378
XceI	RCATGY	1 cut(s)	1586
XmiI	GTMKAC	1 cut(s)	168
XmnI	GAANNNNTTC	1 cut(s)	1919
XspI	CTAG	6 cut(s)	776, 1113, 1232, 1317, 1815, 1859
ZraI	GACGTC	1 cut(s)	1450
ZrmI	AGTACT	1 cut(s)	1346
Zsp2I	ATGCAT	1 cut(s)	1905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.