Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0006114

Physical Location & Seq

Genomic Coordinates Forward (+)

1929431 .. 1933038

Gene Structure 3608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1027000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGCGGAGAGTGGCAGCGAGACCGCCGCCGGAGCTAAACCTAAACGAAAACCAATCGTATGGCTGGGGATCTTCCTCATCTCCCACAGCTTCTTCTTCAGTGTCGTTTTCTCCGCCGCCGGGGTGGTGGCTCTCTTGCTGCTTCCGGTTCTCGCCAAGAACACTTACATCTCCGAGAATGCCCTCATGTCTGGCTCCGCGGCGTCTATGCTTTCGAATCAGGAGGTTGCAGAGGCGAGCAGATTGGTTAGTGATTTGACCTCTTCGAATTTGAAGCCTCTTGGTTCAGCAATAGGAAGTCAAAGAATCTTAGCACAGCATATGTCAAACGTGGGTGCCGAAGTTAGTTTTCACAAATTCCACTCTCAGCGAAATGAGTTTCACCCACTCTACTTCTTTTCTAGCCCTGATTCTGGAAGAGTTGAGCAGAACGTCAGTTGTTCAATGCACGGTGTCAACACTGTTGGAATTATAAGAGCACCTCGTGGTGATGGGAAGGAAGGTATTGTCTTGGTTACACCTTTCAATTCAGCGAAAGTGAACCCGAATGAGGCCTTTTCTTTGGGCATTGCATACTCAGTATTTTCCTTGCTCAACAGAGTTCCCTGGTTGGCCAAGGATGTTATATGGCTCGTTGCCGATTCCCATTTTGGAGAGTATGCTGCAGTTTCTGCTTGGCTAAGAGACTATCACACACCTGTATTTAGCGGACTGGGCACGCTAGATGCAGAAATGTGTCCCGAAAGCAATAATCTTTATGGAATGAATGAGAACCTGTCAACAGAAAGGGCAATTTACGATGGATTTAAACGTGCTGGAACCATGGCTGCAGCTCTTGTCATCAAGGTTGCAGATCAAAGTGAACAATTTGAGGATGGTCTAAGCATCTATGCTGAGGCATCCAATGGGCAAATGCCAAATCTTGACCTCATCAATGTTGTGAATTACTTAGCTGTACATAGGCAAGGTTTGCGGGTAAAGGTGGAGAAATTTTGGTCTTTACTTGGCGTGAAGTGGCTCAATACTTTGGGTGAAATATTTGAATCACTCGGACATTTTGCTAGAAGCTTGAATCCTGATTGGAAATTTGGTATCCCAGCTAATGATTATATAGAGGGCAGTGCTACACTCGCAAGTTCATTGTACAACCAGGCTTTGGGTGTCCCCACTGGCCCCCATGGTGCCTTCCGTGACTACCAAGTTGATGCAATTACTTTGGAAATTTCCCCTAAATTTTCTTCGTTGGATAACATAGCCAGACGAAATGACTTACTTCTACGAAGTGGCCGATTAATCGAAGGAGTCATTCGGTCAGTAAACAACCTTCTAGAGAAGTTTCACCAGTCATTTTTTCTGTACCTATTAACGTCTCCAGGTAAATTTGTGTCGGTGGGAGTCTACATGATTGCTTTTGCACTTTTAGTTGCACCACTCCCCTTGGTGGCAGCTTCTCTCTATGTTGATGCTAGTAACTCCGATTCTAGTGTGAAAAAAGAGAAACCTTCTCCTTCGGCCATCATCACTCGCGAATCATGGAAATGGCTATATGCAGCAAAGAAAGCTTTTATTGTCCACTTGTGGGGTTCTGTTGTTTCACTACTCCCGTATTTTATCTGTCAAATGCCGAGTTGCACCCCAACAACCAGCTTTATAATCTGGGTTTTGCTTTCAGTACTCAGCCTTGTGGTTATGTACATGGTTTTGGCCTCTCCGTCATCTCACGCCAATGAATCTCAACCTCAAAGAGTAGAATGGCCCATCTTGAAATCAGTGACTCTTTCAGCTGCCTTCATTGGTTTGTGTCTCATGTCAGTCATTAACTTTGCTACAGCAGAAATTGGGGGGTTACTGATGGTACCAATGTGCTTGATGGCTCATCCGTTGAAGCCCGATGTTAAAGTTAGGAGCAAGAGAACACTTTCAAGGGCGGTTTGCAATCTTGTCCTGGGGTTTATTGGGTTCCCGCCAGTTGCTTTTATAGTGCTGAAAGGCGCATTTGAAGGTTTCGGCAGCACTAATGTTGGTGACTACTGGTCCTGGGTGGAGTCTCTCTGGGCTTGGAATAGTGCTACTTACCTCTACATAGGTATGGTTCACCTGCCATGCTGGGCATTGTGTGTTCATATTTTGTTTCATCGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003923 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016255 GO:0016787 GO:0019538 GO:0019637 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0042765 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0071704 GO:0071944 GO:0090407 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Gaa1

Protein Analysis

715

Amino Acids

78.25

Weight (kDa)

7.99

Isoelectric Point (pI)

40.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gaa1	PF04114	150 - 706	1.8e-102	Gaa1-like, GPI transamidase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19130 AT5G19130
fragaria_vesca	FvH4_6g51172 FvH4_6g51190 FvH4_6g51190 FvH4_6g51190
malus_domestica	MD09G1027000.v1.1 MD17G1027000.v1.1
prunus_persica	Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1
pyrus_communis	pycom111g02110 pycom17g02210
rosa_chinensis	RchiOBHm_Chr2g0172791
rosa_laevigata	RLG00000022137
rosa_multiflora	Rmu_sc0002979.1_g000012 Rmu_sc0010744.1_g000001 Rmu_sc0027475.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079510
rosa_rugosa	Rorug02G0561700
rosa_samantha	Rh2AG639400 Rh2BG652800 Rh2CG618600 Rh2DG666500
rosa_wichuraiana	Rw2G052780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	473, 1652
AarI	CACCTGC	1 cut(s)	2106
Acc36I	ACCTGC	1 cut(s)	2106
Acc65I	GGTACC	1 cut(s)	1855
AccB1I	GGYRCC	3 cut(s)	335, 1181, 1855
AccB7I	CCANNNNNTGG	1 cut(s)	1156
AccI	GTMKAC	1 cut(s)	1398
AccII	CGCG	2 cut(s)	200, 1527
AclWI	GGATC	1 cut(s)	77
AcoI	YGGCCR	3 cut(s)	612, 1285, 1512
AcsI	RAATTY	7 cut(s)	268, 356, 989, 1085, 1221, 1232, 1379
AcuI	CTGAAG	1 cut(s)	82
AcyI	GRCGYC	1 cut(s)	203
AdeI	CACNNNGTG	1 cut(s)	485
AfaI	GTAC	6 cut(s)	957, 1145, 1358, 1674, 1694, 1857
AfiI	CCNNNNNNNGG	6 cut(s)	120, 413, 550, 1156, 1441, 1579
AgsI	TTSAA	9 cut(s)	274, 444, 526, 1043, 1072, 1765, 1885, 1923, 2000
AhdI	GACNNNNNGTC	1 cut(s)	2032
AjnI	CCWGG	5 cut(s)	605, 1149, 1372, 1944, 2036
Alw21I	GWGCWC	1 cut(s)	481
Alw26I	GTCTC	5 cut(s)	14, 678, 1374, 1808, 2052
AlwI	GGATC	1 cut(s)	77
AlwNI	CAGNNNCTG	1 cut(s)	671
AoxI	GGCC	7 cut(s)	552, 612, 1171, 1285, 1512, 1704, 1754
ApeKI	GCWGC	9 cut(s)	15, 139, 662, 827, 830, 1445, 1550, 1784, 2010
ApoI	RAATTY	7 cut(s)	268, 356, 989, 1085, 1221, 1232, 1379
AseI	ATTAAT	1 cut(s)	1292
Asp700I	GAANNNNTTC	1 cut(s)	1918
Asp718I	GGTACC	1 cut(s)	1855
AspLEI	GCGC	1 cut(s)	1994
AspS9I	GGNCC	3 cut(s)	1172, 1755, 2034
AsuC2I	CCSGG	1 cut(s)	121
AsuHPI	GGTGA	6 cut(s)	374, 500, 1043, 1331, 2036, 2087
AsuII	TTCGAA	2 cut(s)	215, 266
AvaII	GGWCC	1 cut(s)	2034
BaeGI	GKGCMC	1 cut(s)	719
BaeI	ACNNNNGTAYC	2 cut(s)	1847, 1880
BalI	TGGCCA	1 cut(s)	614
BanI	GGYRCC	3 cut(s)	335, 1181, 1855
BarI	GAAGNNNNNNTAC	2 cut(s)	1308, 1340
BauI	CACGAG	1 cut(s)	483
Bbv12I	GWGCWC	1 cut(s)	481
BbvCI	CCTCAGC	1 cut(s)	894
BbvI	GCAGC	9 cut(s)	27, 126, 649, 814, 842, 1457, 1562, 1771, 2022
BccI	CCATC	7 cut(s)	485, 794, 869, 1523, 1766, 1846, 1864
BciT130I	CCWGG	5 cut(s)	607, 1151, 1374, 1946, 2038
BciVI	GTATCC	1 cut(s)	1103
BcnI	CCSGG	1 cut(s)	121
BcoDI	GTCTC	5 cut(s)	14, 678, 1374, 1808, 2052
BfaI	CTAG	6 cut(s)	402, 722, 1062, 1328, 1467, 1482
BfmI	CTRYAG	3 cut(s)	663, 828, 1827
BfuAI	ACCTGC	1 cut(s)	2106
BfuI	GTATCC	1 cut(s)	1103
BmcAI	AGTACT	1 cut(s)	1674
Bme1390I	CCNGG	6 cut(s)	121, 607, 1151, 1374, 1946, 2038
Bme18I	GGWCC	1 cut(s)	2034
BmeRI	GACNNNNNGTC	1 cut(s)	2032
BmgT120I	GGNCC	3 cut(s)	1172, 1755, 2034
BmiI	GGNNCC	7 cut(s)	196, 337, 820, 1174, 1183, 1857, 1961
BmrFI	CCNGG	6 cut(s)	121, 607, 1151, 1374, 1946, 2038
BmrI	ACTGGG	1 cut(s)	722
BmsI	GCATC	5 cut(s)	715, 894, 908, 1195, 1453
BmuI	ACTGGG	1 cut(s)	722
BpmI	CTGGAG	1 cut(s)	1356
Bpu10I	CCTNAGC	1 cut(s)	894
Bpu14I	TTCGAA	2 cut(s)	215, 266
BpuMI	CCSGG	1 cut(s)	121
BsaHI	GRCGYC	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	14
BsaJI	CCNNGG	9 cut(s)	120, 198, 605, 615, 822, 1177, 1437, 1945, 2037
BsaWI	WCCGGW	1 cut(s)	145
Bsc4I	CCNNNNNNNGG	6 cut(s)	120, 413, 550, 1156, 1441, 1579
Bse1I	ACTGG	5 cut(s)	717, 1174, 1342, 1967, 2036
Bse3DI	GCAATG	1 cut(s)	567
BseBI	CCWGG	5 cut(s)	607, 1151, 1374, 1946, 2038
BseDI	CCNNGG	9 cut(s)	120, 198, 605, 615, 822, 1177, 1437, 1945, 2037
BseGI	GGATG	4 cut(s)	625, 880, 899, 1876
BseLI	CCNNNNNNNGG	6 cut(s)	120, 413, 550, 1156, 1441, 1579
BseMI	GCAATG	1 cut(s)	567
BseMII	CTCAG	4 cut(s)	380, 591, 885, 1690
BseNI	ACTGG	5 cut(s)	717, 1174, 1342, 1967, 2036
BseSI	GKGCMC	1 cut(s)	719
BseXI	GCAGC	9 cut(s)	27, 126, 649, 814, 842, 1457, 1562, 1771, 2022
BseYI	CCCAGC	3 cut(s)	64, 1096, 2106
Bsh1236I	CGCG	2 cut(s)	200, 1527
BshFI	GGCC	7 cut(s)	554, 614, 1173, 1287, 1514, 1706, 1756
BshNI	GGYRCC	3 cut(s)	335, 1181, 1855
BsiHKAI	GWGCWC	1 cut(s)	481
BsiSI	CCGG	3 cut(s)	30, 120, 146
BslFI	GGGAC	2 cut(s)	723, 1148
BslI	CCNNNNNNNGG	6 cut(s)	120, 413, 550, 1156, 1441, 1579
BsmAI	GTCTC	5 cut(s)	14, 678, 1374, 1808, 2052
BsmBI	CGTCTC	1 cut(s)	1374
BsmFI	GGGAC	2 cut(s)	723, 1148
BsmI	GAATGC	1 cut(s)	184
BsnI	GGCC	7 cut(s)	554, 614, 1173, 1287, 1514, 1706, 1756
Bso31I	GGTCTC	1 cut(s)	14
Bsp119I	TTCGAA	2 cut(s)	215, 266
Bsp1286I	GDGCHC	2 cut(s)	481, 719
Bsp1407I	TGTACA	3 cut(s)	955, 1143, 1692
Bsp143I	GATC	2 cut(s)	69, 853
Bsp19I	CCATGG	2 cut(s)	822, 1177
Bsp68I	TCGCGA	1 cut(s)	1527
BspANI	GGCC	7 cut(s)	554, 614, 1173, 1287, 1514, 1706, 1756
BspCNI	CTCAG	4 cut(s)	379, 590, 886, 1689
BspFNI	CGCG	2 cut(s)	200, 1527
BspLI	GGNNCC	7 cut(s)	196, 337, 820, 1174, 1183, 1857, 1961
BspMAI	CTGCAG	2 cut(s)	667, 832
BspMI	ACCTGC	1 cut(s)	2106
BspPI	GGATC	1 cut(s)	77
BspT104I	TTCGAA	2 cut(s)	215, 266
BspT107I	GGYRCC	3 cut(s)	335, 1181, 1855
BspTNI	GGTCTC	1 cut(s)	14
BsrDI	GCAATG	1 cut(s)	567
BsrGI	TGTACA	3 cut(s)	955, 1143, 1692
BsrI	ACTGG	5 cut(s)	717, 1174, 1342, 1967, 2036
BssECI	CCNNGG	9 cut(s)	120, 198, 605, 615, 822, 1177, 1437, 1945, 2037
BssMI	GATC	2 cut(s)	69, 853
BssNI	GRCGYC	1 cut(s)	203
BssSI	CACGAG	1 cut(s)	483
BssT1I	CCWWGG	4 cut(s)	615, 822, 1177, 1437
Bst2BI	CACGAG	1 cut(s)	483
Bst2UI	CCWGG	5 cut(s)	607, 1151, 1374, 1946, 2038
Bst4CI	ACNGT	2 cut(s)	452, 463
Bst6I	CTCTTC	2 cut(s)	268, 412
BstACI	GRCGYC	1 cut(s)	203
BstAPI	GCANNNNNTGC	2 cut(s)	671, 970
BstAUI	TGTACA	3 cut(s)	955, 1143, 1692
BstBI	TTCGAA	2 cut(s)	215, 266
BstC8I	GCNNGC	2 cut(s)	238, 719
BstDEI	CTNAG	8 cut(s)	310, 366, 577, 680, 881, 894, 949, 1676
BstDSI	CCRYGG	3 cut(s)	198, 822, 1177
BstF5I	GGATG	4 cut(s)	625, 880, 899, 1876
BstFNI	CGCG	2 cut(s)	200, 1527
BstHHI	GCGC	1 cut(s)	1994
BstKTI	GATC	2 cut(s)	72, 856
BstMAI	GTCTC	5 cut(s)	14, 678, 1374, 1808, 2052
BstMBI	GATC	2 cut(s)	69, 853
BstMWI	GCNNNNNNNGC	6 cut(s)	32, 671, 714, 970, 1130, 1559
BstNI	CCWGG	5 cut(s)	607, 1151, 1374, 1946, 2038
BstSCI	CCNGG	6 cut(s)	119, 605, 1149, 1372, 1944, 2036
BstSFI	CTRYAG	3 cut(s)	663, 828, 1827
BstSLI	GKGCMC	1 cut(s)	719
BstUI	CGCG	2 cut(s)	200, 1527
BstV1I	GCAGC	9 cut(s)	27, 126, 649, 814, 842, 1457, 1562, 1771, 2022
BstX2I	RGATCY	1 cut(s)	69
BstXI	CCANNNNNNTGG	1 cut(s)	60
BstYI	RGATCY	1 cut(s)	69
BsuI	GTATCC	1 cut(s)	1103
BsuRI	GGCC	7 cut(s)	554, 614, 1173, 1287, 1514, 1706, 1756
BtgI	CCRYGG	3 cut(s)	198, 822, 1177
BtsCI	GGATG	4 cut(s)	625, 880, 899, 1876
BtsI	GCAGTG	1 cut(s)	1126
BtsIMutI	CAGTG	5 cut(s)	106, 459, 1126, 1167, 1776
BtuMI	TCGCGA	1 cut(s)	1527
BveI	ACCTGC	1 cut(s)	2106
Cac8I	GCNNGC	2 cut(s)	238, 719
CaiI	CAGNNNCTG	1 cut(s)	671
CfoI	GCGC	1 cut(s)	1994
Cfr13I	GGNCC	3 cut(s)	1172, 1755, 2034
Cfr42I	CCGCGG	1 cut(s)	201
CseI	GACGC	1 cut(s)	192
Csp6I	GTAC	6 cut(s)	956, 1144, 1357, 1673, 1693, 1856
CspCI	CAANNNNNGTGG	2 cut(s)	1419, 1454
CviAII	CATG	8 cut(s)	187, 823, 1178, 1402, 1533, 1696, 1807, 2103
CviQI	GTAC	6 cut(s)	956, 1144, 1357, 1673, 1693, 1856
DdeI	CTNAG	8 cut(s)	310, 366, 577, 680, 881, 894, 949, 1676
DpnI	GATC	2 cut(s)	71, 855
DpnII	GATC	2 cut(s)	69, 853
DraI	TTTAAA	1 cut(s)	808
DraIII	CACNNNGTG	1 cut(s)	485
DriI	GACNNNNNGTC	1 cut(s)	2032
EaeI	YGGCCR	3 cut(s)	612, 1285, 1512
Eam1104I	CTCTTC	2 cut(s)	268, 412
Eam1105I	GACNNNNNGTC	1 cut(s)	2032
EarI	CTCTTC	2 cut(s)	268, 412
EciI	GGCGGA	2 cut(s)	20, 103
Eco130I	CCWWGG	4 cut(s)	615, 822, 1177, 1437
Eco147I	AGGCCT	1 cut(s)	554
Eco31I	GGTCTC	1 cut(s)	14
Eco47I	GGWCC	1 cut(s)	2034
Eco57I	CTGAAG	1 cut(s)	82
EcoRII	CCWGG	5 cut(s)	605, 1149, 1372, 1944, 2036
EcoT14I	CCWWGG	4 cut(s)	615, 822, 1177, 1437
ErhI	CCWWGG	4 cut(s)	615, 822, 1177, 1437
Esp3I	CGTCTC	1 cut(s)	1374
FaeI	CATG	8 cut(s)	190, 826, 1181, 1405, 1536, 1699, 1810, 2106
FaqI	GGGAC	2 cut(s)	723, 1148
FatI	CATG	8 cut(s)	186, 822, 1177, 1401, 1532, 1695, 1806, 2102
FauI	CCCGC	2 cut(s)	966, 1971
FauNDI	CATATG	1 cut(s)	321
FblI	GTMKAC	1 cut(s)	1398
FokI	GGATG	4 cut(s)	632, 886, 887, 1863
FspBI	CTAG	6 cut(s)	402, 722, 1062, 1328, 1467, 1482
GlaI	GCGC	1 cut(s)	1993
GsaI	CCCAGC	3 cut(s)	68, 1100, 2110
GsuI	CTGGAG	1 cut(s)	1356
HaeIII	GGCC	7 cut(s)	554, 614, 1173, 1287, 1514, 1706, 1756
HapII	CCGG	3 cut(s)	30, 120, 146
HgaI	GACGC	1 cut(s)	192
HhaI	GCGC	1 cut(s)	1994
Hin1I	GRCGYC	1 cut(s)	203
Hin1II	CATG	8 cut(s)	190, 826, 1181, 1405, 1536, 1699, 1810, 2106
Hin6I	GCGC	1 cut(s)	1992
HinP1I	GCGC	1 cut(s)	1992
HincII	GTYRAC	2 cut(s)	457, 780
HindII	GTYRAC	2 cut(s)	457, 780
HindIII	AAGCTT	2 cut(s)	1066, 1560
HpaII	CCGG	3 cut(s)	30, 120, 146
HphI	GGTGA	6 cut(s)	374, 500, 1043, 1331, 2036, 2087
Hpy166II	GTNNAC	8 cut(s)	457, 541, 780, 863, 1318, 1399, 1573, 2095
Hpy188I	TCNGA	3 cut(s)	175, 1052, 1477
Hpy188III	TCNNGA	8 cut(s)	221, 414, 740, 923, 1076, 1328, 1526, 1762
Hpy8I	GTNNAC	8 cut(s)	457, 541, 780, 863, 1318, 1399, 1573, 2095
HpyAV	CCTTC	9 cut(s)	490, 494, 1195, 1292, 1334, 1512, 1518, 1798, 1994
HpyCH4III	ACNGT	2 cut(s)	452, 463
HpyCH4IV	ACGT	4 cut(s)	330, 432, 811, 1367
HpyF10VI	GCNNNNNNNGC	6 cut(s)	32, 671, 714, 970, 1130, 1559
HpyF3I	CTNAG	8 cut(s)	310, 366, 577, 680, 881, 894, 949, 1676
HpySE526I	ACGT	4 cut(s)	330, 432, 811, 1367
Hsp92I	GRCGYC	1 cut(s)	203
Hsp92II	CATG	8 cut(s)	190, 826, 1181, 1405, 1536, 1699, 1810, 2106
HspAI	GCGC	1 cut(s)	1992
KpnI	GGTACC	1 cut(s)	1859
KspI	CCGCGG	1 cut(s)	201
Kzo9I	GATC	2 cut(s)	69, 853
LmnI	GCTCC	3 cut(s)	32, 200, 1905
Lsp1109I	GCAGC	9 cut(s)	27, 126, 649, 814, 842, 1457, 1562, 1771, 2022
LweI	GCATC	5 cut(s)	715, 894, 908, 1195, 1453
MaeI	CTAG	6 cut(s)	402, 722, 1062, 1328, 1467, 1482
MaeII	ACGT	4 cut(s)	330, 432, 811, 1367
MaeIII	GTNAC	6 cut(s)	514, 1190, 1469, 1771, 1845, 2024
MalI	GATC	2 cut(s)	71, 855
MboI	GATC	2 cut(s)	69, 853
MboII	GAAGA	6 cut(s)	64, 85, 88, 255, 429, 1230
MflI	RGATCY	1 cut(s)	69
MhlI	GDGCHC	2 cut(s)	481, 719
MlsI	TGGCCA	1 cut(s)	614
MluNI	TGGCCA	1 cut(s)	614
MlyI	GAGTC	4 cut(s)	1311, 1404, 1768, 2054
MmeI	TCCRAC	2 cut(s)	445, 1224
Mox20I	TGGCCA	1 cut(s)	614
MroXI	GAANNNNTTC	1 cut(s)	1918
MscI	TGGCCA	1 cut(s)	614
MseI	TTAA	6 cut(s)	807, 1292, 1364, 1818, 1896, 2143
MslI	CAYNNNNRTG	3 cut(s)	1537, 1725, 2087
Msp20I	TGGCCA	1 cut(s)	614
MspA1I	CMGCKG	2 cut(s)	200, 1784
MspI	CCGG	3 cut(s)	30, 120, 146
MspR9I	CCNGG	6 cut(s)	121, 607, 1151, 1374, 1946, 2038
Mva1269I	GAATGC	1 cut(s)	184
MvaI	CCWGG	5 cut(s)	607, 1151, 1374, 1946, 2038
MvnI	CGCG	2 cut(s)	200, 1527
MwoI	GCNNNNNNNGC	6 cut(s)	32, 671, 714, 970, 1130, 1559
NciI	CCSGG	1 cut(s)	121
NcoI	CCATGG	2 cut(s)	822, 1177
NdeI	CATATG	1 cut(s)	321
NdeII	GATC	2 cut(s)	69, 853
NlaIII	CATG	8 cut(s)	190, 826, 1181, 1405, 1536, 1699, 1810, 2106
NlaIV	GGNNCC	7 cut(s)	196, 337, 820, 1174, 1183, 1857, 1961
NmeAIII	GCCGAG	1 cut(s)	1650
NmuCI	GTSAC	3 cut(s)	1190, 1771, 2024
NruI	TCGCGA	1 cut(s)	1527
NspV	TTCGAA	2 cut(s)	215, 266
PaqCI	CACCTGC	1 cut(s)	2106
PceI	AGGCCT	1 cut(s)	554
PcsI	WCGNNNNNNNCGW	2 cut(s)	336, 1285
PctI	GAATGC	1 cut(s)	184
PdmI	GAANNNNTTC	1 cut(s)	1918
PfeI	GAWTC	9 cut(s)	217, 306, 410, 641, 1043, 1072, 1478, 1529, 1730
PflMI	CCANNNNNTGG	1 cut(s)	1156
PleI	GAGTC	4 cut(s)	1310, 1403, 1768, 2053
PpsI	GAGTC	4 cut(s)	1310, 1403, 1768, 2053
PshBI	ATTAAT	1 cut(s)	1292
PsiI	TTATAA	2 cut(s)	473, 1652
Psp6I	CCWGG	5 cut(s)	605, 1149, 1372, 1944, 2036
PspFI	CCCAGC	3 cut(s)	64, 1096, 2106
PspGI	CCWGG	5 cut(s)	605, 1149, 1372, 1944, 2036
PspN4I	GGNNCC	7 cut(s)	196, 337, 820, 1174, 1183, 1857, 1961
PspPI	GGNCC	3 cut(s)	1172, 1755, 2034
PstI	CTGCAG	2 cut(s)	667, 832
PstNI	CAGNNNCTG	1 cut(s)	671
PsuI	RGATCY	1 cut(s)	69
PvuII	CAGCTG	1 cut(s)	1784
RruI	TCGCGA	1 cut(s)	1527
RsaI	GTAC	6 cut(s)	957, 1145, 1358, 1674, 1694, 1857
RsaNI	GTAC	6 cut(s)	956, 1144, 1357, 1673, 1693, 1856
RseI	CAYNNNNRTG	3 cut(s)	1537, 1725, 2087
SacII	CCGCGG	1 cut(s)	201
SaqAI	TTAA	6 cut(s)	807, 1292, 1364, 1818, 1896, 2143
Sau3AI	GATC	2 cut(s)	69, 853
Sau96I	GGNCC	3 cut(s)	1172, 1755, 2034
ScaI	AGTACT	1 cut(s)	1674
SchI	GAGTC	4 cut(s)	1311, 1404, 1768, 2054
ScrFI	CCNGG	6 cut(s)	121, 607, 1151, 1374, 1946, 2038
SduI	GDGCHC	2 cut(s)	481, 719
SfaNI	GCATC	5 cut(s)	715, 894, 908, 1195, 1453
SfcI	CTRYAG	3 cut(s)	663, 828, 1827
Sfr303I	CCGCGG	1 cut(s)	201
SfuI	TTCGAA	2 cut(s)	215, 266
SgrBI	CCGCGG	1 cut(s)	201
SinI	GGWCC	1 cut(s)	2034
SmiMI	CAYNNNNRTG	3 cut(s)	1537, 1725, 2087
SseBI	AGGCCT	1 cut(s)	554
SspI	AATATT	1 cut(s)	1038
SspMI	CTAG	6 cut(s)	402, 722, 1062, 1328, 1467, 1482
StuI	AGGCCT	1 cut(s)	554
StyD4I	CCNGG	6 cut(s)	119, 605, 1149, 1372, 1944, 2036
StyI	CCWWGG	4 cut(s)	615, 822, 1177, 1437
TaaI	ACNGT	2 cut(s)	452, 463
TaiI	ACGT	4 cut(s)	333, 435, 814, 1370
TaqI	TCGA	3 cut(s)	215, 266, 1296
TaqII	GACCGA	1 cut(s)	1299
TatI	WGTACW	4 cut(s)	955, 1143, 1672, 1692
TauI	GCSGC	3 cut(s)	29, 119, 203
TfiI	GAWTC	9 cut(s)	217, 306, 410, 641, 1043, 1072, 1478, 1529, 1730
Tru1I	TTAA	6 cut(s)	807, 1292, 1364, 1818, 1896, 2143
Tru9I	TTAA	6 cut(s)	807, 1292, 1364, 1818, 1896, 2143
TscAI	CASTG	5 cut(s)	106, 466, 1126, 1174, 1776
TseFI	GTSAC	3 cut(s)	1190, 1771, 2024
TseI	GCWGC	9 cut(s)	15, 139, 662, 827, 830, 1445, 1550, 1784, 2010
Tsp45I	GTSAC	3 cut(s)	1190, 1771, 2024
TspDTI	ATGAA	6 cut(s)	779, 1128, 1743, 1780, 2111, 2123
TspGWI	ACGGA	3 cut(s)	1178, 1701, 1869
TspRI	CASTG	5 cut(s)	106, 466, 1126, 1174, 1776
Van91I	CCANNNNNTGG	1 cut(s)	1156
VpaK11BI	GGWCC	1 cut(s)	2034
VspI	ATTAAT	1 cut(s)	1292
XapI	RAATTY	7 cut(s)	268, 356, 989, 1085, 1221, 1232, 1379
XbaI	TCTAGA	1 cut(s)	1327
XmiI	GTMKAC	1 cut(s)	1398
XmnI	GAANNNNTTC	1 cut(s)	1918
XspI	CTAG	6 cut(s)	402, 722, 1062, 1328, 1467, 1482
ZrmI	AGTACT	1 cut(s)	1674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.