Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006114

Physical Location & Seq

Genomic Coordinates Forward (+)

86029194 .. 86033366

Gene Structure 4173 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54006

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGCAGCCCATGTTTACGAGCCCAAAACCCGAAACTAAATTACTCCCAGGTTTCACCTCCGAGCTCCACCACTTCGTCTTTCAGTCATTCCTGACTTTCCCAAAACGAACTCAGACTGAGACAAACTTCCACTCACCGCTAAACCAAAACCTTCCGAGCATCCCATTCATTCCGGCAGCCATGGCCGGCGCCGAGACCGACACCGACACCTCCAAGGCCAAACCACGACCCATCGTACGCCTCGGGATCTTCCTCATCTCTCATAGCTTCTTCTTCAGTGTCGTCTTCTCCGCCGCCGGCGTTTTGGCTCTTCTGCTGCTTCCGGTTCTCGCCAAGAACACTTACATCTCCGAGAATTCGCTTATGCCAGGCTCTGTGGCTCCCATGCTTTCCGATCAGGAGGTTGCGGAGGCCAATAGATTGATAGACGATTTGACTGCTTTGAATTCCAAGCCTCTTGGTTCAGTAATAGGAAGTCGAAGACTGGTAGCACAGTATATGTCAAATTCGGGCGCTGAAGTTAGTTTTCACAAGTTCCACCCTCAGATAAATCAGTTTCACCCGCTGCACTTCTTTTCTAGCCCTGATTCGAGAAGAATCGAACAGAATGTCAGTTGTGCATTGCACGGTGTTAACACTGTTGGAATTATAAGAGCACCACGTGGTGATGGGAAGGAAGCTATTGTTTTGGTGACTCCTTTCAATTCAGCGAAAGTTAACAAGAATGAGGCCTTATCTTTGGGAATTGCATACTCAGTATTTTCCTTGCTTACCAGAGTTCCCTGGCTGGCCAAGGATGTGATATGGCTCGTTGCAGATTCCCAATTTGGTGAGTATGCCGCAGTTTCTGCTTGGCTAAGAGATTATCACACTCCTTTATTCAGCGGACTGGGCACAATAGATGCAGAAATGTGTCCTGAAAGCAATAATCTGCATGGAATGGAAGAGAACCATTTTACAGAAAGGATGACTTATGATGGATTTAAACGGGCTGGGACCATGGCTGCAGCCCTTGTTGTGAAGGTTGGTGATCGGGCTCATCAATATGAGGACAGTCTGAGTATCTATGCTGAGGCATCCAATGGGCAGATGCCAAATCTTGACCTCATCAATACTGTGAATTATTTAGCAGTACATAGGCAAGGTTTGCGGGTAAAGGTGGAGAAATTGAGGTCTTTCCTTGATATGGGATGGCTTGAGACTTTGGGTGAAATGTTTGAATTACTAGGCCATTATGCTAGAAGCATAAATCCCCAATTGAAATTTGGTATCCCAGCTGCAGAGTATATTGAGGGTAGTGCCACACTTGCAAGTTCATTGTACTACCAGGCTTTGGGTGTACCCACTGGTCCCCATGGTGCTTTTCGTGATTACCAAGTTGATGCAATTACTGTGGAAATTTTGCCTAAAGTTTATACTTTGGGTAACAGAAGACAAAATGACTTCCTTCTGCGAAGTGGCCGATTAATTGAAGGAGTTGTGCAATCTGTAAACAACCTTCTAGAAAAGTTTCACCAGTCATTTTTTCTATACCTATTAACATCTCCCAGTAAATTTGTGTCGGTGGGAGTCTACATGATTGCTTTTGTACTACTAGTTGCACCGCTCCCCATGGTGGCTGCCTCTCTCTTTGTAAATGCCAGTAACTCTGATGATAGTCTGAATACAGAGAAACCTGCTCCTTCAGCCACTGCTGCTGACTCTGCTCCTTTGGTCACTGCTTATGAGTCTTCTCCTTTACTCAGTGCTGCTAATTCTAGTTCTTTGGCCACTACTGCTGGTTGCATCACTCTCAGCTCATGGAAATGGCTTTATGCAGCAAAGAAATCTTTTGTTGTCTACTTGTGGGGCTCTGTTGTTTCGTTACTCCCGTATTTCATCTGTCAAATACCCAATTGCACTCCAACAACCAGCTTTATAATCTGGGTTTTGCTTTCAATACTCAGCCTTGTGGTCATGTATATGATTTTGGCTTCTCCATTTTCTGATGCTAATAACTCTCGATCACAAAAAGAGTGGGCCATCCTAAAATCAGTGACTATGTCAGCTGCATTCATTGGTTTGTGTCTCATGTCAATCATCAACTTCGCTACAGCAGAAATTGGGGGCTTACTGATTGTCCCCATGTGTTTGATGGCTTATCCTTTGAAGCTTGATGTTAAAACTAGGAGCTTGAGAACAATTTCAAGAGCAGCTTGTAATCTCGTTCTGGGGATTGTAGGATTTCCACCAGTTACTTTTATAGTTCTGAAAGGAGCATTCGAGGGTTACAGCAGCATTAGTGTCGGTGACTTCTGGTCTTGGGTGGAGTCTCTGTGGGTTTGGAATAGTGCCACTTACCTATATATTGGTGTGGTACACCTGCCATCCTGGGTTTTGTGTATTCATATATTGTTTCACCACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003923 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016255 GO:0016787 GO:0019538 GO:0019637 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0042765 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0071704 GO:0071944 GO:0090407 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Gaa1

Protein Analysis

802

Amino Acids

88.2

Weight (kDa)

6.87

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gaa1	PF04114	209 - 794	5.8e-99	Gaa1-like, GPI transamidase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19130 AT5G19130
fragaria_vesca	FvH4_6g51172 FvH4_6g51190 FvH4_6g51190 FvH4_6g51190
malus_domestica	MD09G1027000.v1.1 MD17G1027000.v1.1
prunus_persica	Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1
pyrus_communis	pycom111g02110 pycom17g02210
rosa_chinensis	RchiOBHm_Chr2g0172791
rosa_laevigata	RLG00000022137
rosa_multiflora	Rmu_sc0002979.1_g000012 Rmu_sc0010744.1_g000001 Rmu_sc0027475.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079510
rosa_rugosa	Rorug02G0561700
rosa_samantha	Rh2AG639400 Rh2BG652800 Rh2CG618600 Rh2DG666500
rosa_wichuraiana	Rw2G052780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	650, 1919
AarI	CACCTGC	1 cut(s)	2370
Acc36I	ACCTGC	2 cut(s)	1684, 2370
AccB1I	GGYRCC	1 cut(s)	188
AccB7I	CCANNNNNTGG	1 cut(s)	1333
AccBSI	CCGCTC	1 cut(s)	1606
AccI	GTMKAC	2 cut(s)	1572, 1839
AciI	CCGC	9 cut(s)	137, 291, 294, 407, 563, 840, 885, 1150, 1604
AclWI	GGATC	1 cut(s)	254
AcoI	YGGCCR	4 cut(s)	183, 789, 1459, 1767
AcsI	RAATTY	6 cut(s)	355, 445, 505, 1262, 1398, 1553
AcuI	CTGAAG	3 cut(s)	259, 537, 1668
AcvI	CACGTG	1 cut(s)	662
AcyI	GRCGYC	1 cut(s)	189
AdeI	CACNNNGTG	2 cut(s)	662, 665
AfaI	GTAC	6 cut(s)	237, 1134, 1322, 1341, 1590, 2358
AfiI	CCNNNNNNNGG	3 cut(s)	1186, 1333, 1615
AgsI	TTSAA	8 cut(s)	445, 703, 1220, 1261, 1472, 1938, 2149, 2187
AhdI	GACNNNNNGTC	1 cut(s)	2296
AhlI	ACTAGT	1 cut(s)	1594
AjnI	CCWGG	5 cut(s)	46, 367, 782, 1326, 2369
Alw21I	GWGCWC	2 cut(s)	66, 658
Alw26I	GTCTC	5 cut(s)	113, 188, 1193, 2072, 2316
AlwI	GGATC	1 cut(s)	254
AlwNI	CAGNNNCTG	3 cut(s)	374, 848, 1691
Ama87I	CYCGRG	1 cut(s)	242
AoxI	GGCC	9 cut(s)	183, 216, 411, 729, 789, 1228, 1459, 1767, 2019
ApoI	RAATTY	6 cut(s)	355, 445, 505, 1262, 1398, 1553
ArsI	GACNNNNNNTTYG	2 cut(s)	594, 626
AseI	ATTAAT	1 cut(s)	1466
Asp700I	GAANNNNTTC	2 cut(s)	1509, 2182
AspLEI	GCGC	2 cut(s)	191, 515
AspS9I	GGNCC	3 cut(s)	996, 1349, 2019
AvaI	CYCGRG	1 cut(s)	242
AvaII	GGWCC	2 cut(s)	996, 1349
BaeGI	GKGCMC	1 cut(s)	896
BalI	TGGCCA	2 cut(s)	791, 1769
BanI	GGYRCC	1 cut(s)	188
BanII	GRGCYC	4 cut(s)	23, 66, 1039, 1853
BarI	GAAGNNNNNNTAC	2 cut(s)	1482, 1514
BbrPI	CACGTG	1 cut(s)	662
BbsI	GAAGAC	4 cut(s)	277, 487, 1438, 1722
Bbv12I	GWGCWC	2 cut(s)	66, 658
BbvCI	CCTCAGC	1 cut(s)	1071
BccI	CCATC	7 cut(s)	239, 662, 971, 1185, 2030, 2128, 2374
BcgI	CGANNNNNNTGC	4 cut(s)	419, 453, 2266, 2300
BciT130I	CCWGG	5 cut(s)	48, 369, 784, 1328, 2371
BciVI	GTATCC	1 cut(s)	1280
BcoDI	GTCTC	5 cut(s)	113, 188, 1193, 2072, 2316
BcuI	ACTAGT	1 cut(s)	1594
BfaI	CTAG	7 cut(s)	579, 1226, 1239, 1502, 1595, 1758, 2166
BfmI	CTRYAG	3 cut(s)	1005, 1278, 2091
BfoI	RGCGCY	2 cut(s)	192, 516
BfuAI	ACCTGC	2 cut(s)	1684, 2370
BfuI	GTATCC	1 cut(s)	1280
Bme1390I	CCNGG	5 cut(s)	48, 369, 784, 1328, 2371
Bme18I	GGWCC	2 cut(s)	996, 1349
BmeRI	GACNNNNNGTC	1 cut(s)	2296
BmeT110I	CYCGRG	1 cut(s)	242
BmgT120I	GGNCC	3 cut(s)	996, 1349, 2019
BmiI	GGNNCC	4 cut(s)	190, 381, 997, 1351
BmrFI	CCNGG	5 cut(s)	48, 369, 784, 1328, 2371
BmrI	ACTGGG	2 cut(s)	899, 1542
BmsI	GCATC	7 cut(s)	168, 892, 1080, 1085, 1372, 1794, 1978
BmuI	ACTGGG	2 cut(s)	899, 1542
BpiI	GAAGAC	4 cut(s)	277, 487, 1438, 1722
Bpu10I	CCTNAGC	1 cut(s)	1071
BpuEI	CTTGAG	2 cut(s)	1217, 2194
BsaAI	YACGTR	1 cut(s)	662
BsaHI	GRCGYC	1 cut(s)	189
BsaI	GGTCTC	1 cut(s)	188
BsaWI	WCCGGW	1 cut(s)	322
BsaXI	ACNNNNNCTCC	2 cut(s)	2300, 2330
Bsc4I	CCNNNNNNNGG	3 cut(s)	1186, 1333, 1615
Bse118I	RCCGGY	2 cut(s)	185, 296
Bse1I	ACTGG	7 cut(s)	489, 894, 1351, 1516, 1548, 1641, 2231
Bse3DI	GCAATG	1 cut(s)	620
BseBI	CCWGG	5 cut(s)	48, 369, 784, 1328, 2371
BseGI	GGATG	7 cut(s)	159, 802, 972, 1076, 1196, 2022, 2366
BseLI	CCNNNNNNNGG	3 cut(s)	1186, 1333, 1615
BseMI	GCAATG	1 cut(s)	620
BseMII	CTCAG	9 cut(s)	108, 125, 557, 768, 1049, 1062, 1756, 1807, 1957
BseNI	ACTGG	7 cut(s)	489, 894, 1351, 1516, 1548, 1641, 2231
BseSI	GKGCMC	1 cut(s)	896
BseYI	CCCAGC	2 cut(s)	992, 1273
BsgI	GTGCAG	1 cut(s)	551
BshFI	GGCC	9 cut(s)	185, 218, 413, 731, 791, 1230, 1461, 1769, 2021
BshNI	GGYRCC	1 cut(s)	188
BsiHKAI	GWGCWC	2 cut(s)	66, 658
BsiHKCI	CYCGRG	1 cut(s)	242
BsiSI	CCGG	4 cut(s)	173, 186, 297, 323
BsiWI	CGTACG	1 cut(s)	235
BslFI	GGGAC	3 cut(s)	1009, 1335, 2105
BslI	CCNNNNNNNGG	3 cut(s)	1186, 1333, 1615
BsmAI	GTCTC	5 cut(s)	113, 188, 1193, 2072, 2316
BsmFI	GGGAC	3 cut(s)	1009, 1335, 2105
BsmI	GAATGC	2 cut(s)	2051, 2258
BsnI	GGCC	9 cut(s)	185, 218, 413, 731, 791, 1230, 1461, 1769, 2021
Bso31I	GGTCTC	1 cut(s)	188
BsoBI	CYCGRG	1 cut(s)	242
Bsp1286I	GDGCHC	6 cut(s)	23, 66, 658, 896, 1039, 1853
Bsp143I	GATC	4 cut(s)	246, 394, 1030, 2003
Bsp19I	CCATGG	4 cut(s)	180, 999, 1354, 1611
BspACI	CCGC	9 cut(s)	137, 291, 294, 407, 563, 840, 885, 1150, 1604
BspANI	GGCC	9 cut(s)	185, 218, 413, 731, 791, 1230, 1461, 1769, 2021
BspCNI	CTCAG	9 cut(s)	109, 124, 556, 767, 1050, 1063, 1755, 1806, 1956
BspLI	GGNNCC	4 cut(s)	190, 381, 997, 1351
BspMAI	CTGCAG	2 cut(s)	1009, 1282
BspMI	ACCTGC	2 cut(s)	1684, 2370
BspPI	GGATC	1 cut(s)	254
BspQI	GCTCTTC	1 cut(s)	315
BspT107I	GGYRCC	1 cut(s)	188
BspTNI	GGTCTC	1 cut(s)	188
BsrBI	CCGCTC	1 cut(s)	1606
BsrDI	GCAATG	1 cut(s)	620
BsrFI	RCCGGY	2 cut(s)	185, 296
BsrI	ACTGG	7 cut(s)	489, 894, 1351, 1516, 1548, 1641, 2231
BssAI	RCCGGY	2 cut(s)	185, 296
BssMI	GATC	4 cut(s)	246, 394, 1030, 2003
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	6 cut(s)	180, 213, 792, 999, 1354, 1611
Bst2UI	CCWGG	5 cut(s)	48, 369, 784, 1328, 2371
Bst4CI	ACNGT	7 cut(s)	495, 629, 640, 1055, 1117, 1393, 2405
Bst6I	CTCTTC	2 cut(s)	315, 939
BstACI	GRCGYC	1 cut(s)	189
BstAPI	GCANNNNNTGC	2 cut(s)	848, 1147
BstBAI	YACGTR	1 cut(s)	662
BstC8I	GCNNGC	3 cut(s)	187, 298, 789
BstDSI	CCRYGG	4 cut(s)	180, 999, 1354, 1611
BstF5I	GGATG	7 cut(s)	159, 802, 972, 1076, 1196, 2022, 2366
BstH2I	RGCGCY	2 cut(s)	192, 516
BstHHI	GCGC	2 cut(s)	191, 515
BstKTI	GATC	4 cut(s)	249, 397, 1033, 2006
BstMAI	GTCTC	5 cut(s)	113, 188, 1193, 2072, 2316
BstMBI	GATC	4 cut(s)	246, 394, 1030, 2003
BstMWI	GCNNNNNNNGC	9 cut(s)	182, 848, 891, 1147, 1307, 1685, 1694, 1703, 1775
BstNI	CCWGG	5 cut(s)	48, 369, 784, 1328, 2371
BstSCI	CCNGG	5 cut(s)	46, 367, 782, 1326, 2369
BstSFI	CTRYAG	3 cut(s)	1005, 1278, 2091
BstSLI	GKGCMC	1 cut(s)	896
BstV2I	GAAGAC	4 cut(s)	277, 487, 1438, 1722
BstX2I	RGATCY	1 cut(s)	246
BstYI	RGATCY	1 cut(s)	246
BsuI	GTATCC	1 cut(s)	1280
BsuRI	GGCC	9 cut(s)	185, 218, 413, 731, 791, 1230, 1461, 1769, 2021
BtgI	CCRYGG	4 cut(s)	180, 999, 1354, 1611
BtsCI	GGATG	7 cut(s)	159, 802, 972, 1076, 1196, 2022, 2366
BtsI	GCAGTG	2 cut(s)	1689, 1716
BtsIMutI	CAGTG	8 cut(s)	283, 636, 1344, 1689, 1716, 1750, 2040, 2401
BveI	ACCTGC	2 cut(s)	1684, 2370
Cac8I	GCNNGC	3 cut(s)	187, 298, 789
CaiI	CAGNNNCTG	3 cut(s)	374, 848, 1691
CfoI	GCGC	2 cut(s)	191, 515
Cfr10I	RCCGGY	2 cut(s)	185, 296
Cfr13I	GGNCC	3 cut(s)	996, 1349, 2019
Csp6I	GTAC	6 cut(s)	236, 1133, 1321, 1340, 1589, 2357
CspCI	CAANNNNNGTGG	4 cut(s)	1374, 1409, 1997, 2032
CviQI	GTAC	6 cut(s)	236, 1133, 1321, 1340, 1589, 2357
DinI	GGCGCC	1 cut(s)	190
DpnI	GATC	4 cut(s)	248, 396, 1032, 2005
DpnII	GATC	4 cut(s)	246, 394, 1030, 2003
DraI	TTTAAA	1 cut(s)	985
DraIII	CACNNNGTG	2 cut(s)	662, 665
DriI	GACNNNNNGTC	1 cut(s)	2296
EaeI	YGGCCR	4 cut(s)	183, 789, 1459, 1767
Eam1104I	CTCTTC	2 cut(s)	315, 939
Eam1105I	GACNNNNNGTC	1 cut(s)	2296
EarI	CTCTTC	2 cut(s)	315, 939
EciI	GGCGGA	1 cut(s)	280
Ecl136II	GAGCTC	1 cut(s)	64
Eco130I	CCWWGG	6 cut(s)	180, 213, 792, 999, 1354, 1611
Eco147I	AGGCCT	1 cut(s)	731
Eco24I	GRGCYC	4 cut(s)	23, 66, 1039, 1853
Eco31I	GGTCTC	1 cut(s)	188
Eco47I	GGWCC	2 cut(s)	996, 1349
Eco53kI	GAGCTC	1 cut(s)	64
Eco57I	CTGAAG	3 cut(s)	259, 537, 1668
Eco72I	CACGTG	1 cut(s)	662
Eco88I	CYCGRG	1 cut(s)	242
EcoICRI	GAGCTC	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	355, 445
EcoRII	CCWGG	5 cut(s)	46, 367, 782, 1326, 2369
EcoT14I	CCWWGG	6 cut(s)	180, 213, 792, 999, 1354, 1611
EcoT38I	GRGCYC	4 cut(s)	23, 66, 1039, 1853
EgeI	GGCGCC	1 cut(s)	190
EheI	GGCGCC	1 cut(s)	190
ErhI	CCWWGG	6 cut(s)	180, 213, 792, 999, 1354, 1611
FalI	AAGNNNNNCTT	4 cut(s)	955, 987, 2179, 2211
FaqI	GGGAC	3 cut(s)	1009, 1335, 2105
FauI	CCCGC	2 cut(s)	570, 1143
FblI	GTMKAC	2 cut(s)	1572, 1839
FokI	GGATG	7 cut(s)	146, 809, 979, 1063, 1203, 2009, 2353
FriOI	GRGCYC	4 cut(s)	23, 66, 1039, 1853
FspBI	CTAG	7 cut(s)	579, 1226, 1239, 1502, 1595, 1758, 2166
GlaI	GCGC	2 cut(s)	190, 514
GsaI	CCCAGC	2 cut(s)	996, 1277
HaeII	RGCGCY	2 cut(s)	192, 516
HaeIII	GGCC	9 cut(s)	185, 218, 413, 731, 791, 1230, 1461, 1769, 2021
HapII	CCGG	4 cut(s)	173, 186, 297, 323
HhaI	GCGC	2 cut(s)	191, 515
Hin1I	GRCGYC	1 cut(s)	189
Hin6I	GCGC	2 cut(s)	189, 513
HinP1I	GCGC	2 cut(s)	189, 513
HincII	GTYRAC	2 cut(s)	634, 718
HindII	GTYRAC	2 cut(s)	634, 718
HindIII	AAGCTT	1 cut(s)	2150
HinfI	GANTC	8 cut(s)	587, 597, 694, 818, 1569, 1700, 1727, 2309
HpaI	GTTAAC	2 cut(s)	634, 718
HpaII	CCGG	4 cut(s)	173, 186, 297, 323
Hpy166II	GTNNAC	8 cut(s)	15, 634, 718, 1340, 1492, 1573, 1840, 2359
Hpy8I	GTNNAC	8 cut(s)	15, 634, 718, 1340, 1492, 1573, 1840, 2359
HpyAV	CCTTC	7 cut(s)	161, 667, 1015, 1457, 1466, 1508, 1692
HpyCH4III	ACNGT	7 cut(s)	495, 629, 640, 1055, 1117, 1393, 2405
HpyCH4IV	ACGT	1 cut(s)	661
HpyF10VI	GCNNNNNNNGC	9 cut(s)	182, 848, 891, 1147, 1307, 1685, 1694, 1703, 1775
HpySE526I	ACGT	1 cut(s)	661
Hsp92I	GRCGYC	1 cut(s)	189
HspAI	GCGC	2 cut(s)	189, 513
KasI	GGCGCC	1 cut(s)	188
KroI	GCCGGC	2 cut(s)	185, 296
KroNI	GCCGGC	2 cut(s)	187, 298
KspAI	GTTAAC	2 cut(s)	634, 718
Kzo9I	GATC	4 cut(s)	246, 394, 1030, 2003
LguI	GCTCTTC	1 cut(s)	315
LmnI	GCTCC	7 cut(s)	69, 385, 1611, 1684, 1711, 2169, 2255
LweI	GCATC	7 cut(s)	168, 892, 1080, 1085, 1372, 1794, 1978
MaeI	CTAG	7 cut(s)	579, 1226, 1239, 1502, 1595, 1758, 2166
MaeII	ACGT	1 cut(s)	661
MaeIII	GTNAC	9 cut(s)	691, 1424, 1643, 1714, 1863, 2035, 2233, 2267, 2288
MalI	GATC	4 cut(s)	248, 396, 1032, 2005
MbiI	CCGCTC	1 cut(s)	1606
MboI	GATC	4 cut(s)	246, 394, 1030, 2003
MfeI	CAATTG	2 cut(s)	1256, 1894
MflI	RGATCY	1 cut(s)	246
MhlI	GDGCHC	6 cut(s)	23, 66, 658, 896, 1039, 1853
MlsI	TGGCCA	2 cut(s)	791, 1769
MluNI	TGGCCA	2 cut(s)	791, 1769
Mly113I	GGCGCC	1 cut(s)	189
MlyI	GAGTC	5 cut(s)	688, 1578, 1694, 1736, 2318
MmeI	TCCRAC	2 cut(s)	622, 1928
Mox20I	TGGCCA	2 cut(s)	791, 1769
MreI	CGCCGGCG	1 cut(s)	296
MroNI	GCCGGC	2 cut(s)	185, 296
MroXI	GAANNNNTTC	2 cut(s)	1509, 2182
MscI	TGGCCA	2 cut(s)	791, 1769
MseI	TTAA	7 cut(s)	633, 717, 984, 1466, 1538, 2160, 2407
MslI	CAYNNNNRTG	3 cut(s)	1044, 1804, 1961
Msp20I	TGGCCA	2 cut(s)	791, 1769
MspA1I	CMGCKG	4 cut(s)	565, 885, 1277, 2048
MspI	CCGG	4 cut(s)	173, 186, 297, 323
MspR9I	CCNGG	5 cut(s)	48, 369, 784, 1328, 2371
MunI	CAATTG	2 cut(s)	1256, 1894
Mva1269I	GAATGC	2 cut(s)	2051, 2258
MvaI	CCWGG	5 cut(s)	48, 369, 784, 1328, 2371
MwoI	GCNNNNNNNGC	9 cut(s)	182, 848, 891, 1147, 1307, 1685, 1694, 1703, 1775
NaeI	GCCGGC	2 cut(s)	187, 298
NarI	GGCGCC	1 cut(s)	189
NcoI	CCATGG	4 cut(s)	180, 999, 1354, 1611
NdeII	GATC	4 cut(s)	246, 394, 1030, 2003
NgoMIV	GCCGGC	2 cut(s)	185, 296
NlaIV	GGNNCC	4 cut(s)	190, 381, 997, 1351
NmeAIII	GCCGAG	1 cut(s)	217
NmuCI	GTSAC	4 cut(s)	691, 1714, 2035, 2288
PaqCI	CACCTGC	1 cut(s)	2370
PceI	AGGCCT	1 cut(s)	731
PciSI	GCTCTTC	1 cut(s)	315
PcsI	WCGNNNNNNNCGW	1 cut(s)	1868
PctI	GAATGC	2 cut(s)	2051, 2258
PdiI	GCCGGC	2 cut(s)	187, 298
PdmI	GAANNNNTTC	2 cut(s)	1509, 2182
PfeI	GAWTC	3 cut(s)	587, 597, 818
Pfl23II	CGTACG	1 cut(s)	235
PflFI	GACNNNGTC	1 cut(s)	2041
PflMI	CCANNNNNTGG	1 cut(s)	1333
PleI	GAGTC	5 cut(s)	688, 1577, 1694, 1735, 2317
PluTI	GGCGCC	1 cut(s)	192
PmaCI	CACGTG	1 cut(s)	662
PmlI	CACGTG	1 cut(s)	662
PpsI	GAGTC	5 cut(s)	688, 1577, 1694, 1735, 2317
Ppu21I	YACGTR	1 cut(s)	662
PshBI	ATTAAT	1 cut(s)	1466
PsiI	TTATAA	2 cut(s)	650, 1919
Psp124BI	GAGCTC	1 cut(s)	66
Psp6I	CCWGG	5 cut(s)	46, 367, 782, 1326, 2369
PspCI	CACGTG	1 cut(s)	662
PspFI	CCCAGC	2 cut(s)	992, 1273
PspGI	CCWGG	5 cut(s)	46, 367, 782, 1326, 2369
PspLI	CGTACG	1 cut(s)	235
PspN4I	GGNNCC	4 cut(s)	190, 381, 997, 1351
PspPI	GGNCC	3 cut(s)	996, 1349, 2019
PstI	CTGCAG	2 cut(s)	1009, 1282
PstNI	CAGNNNCTG	3 cut(s)	374, 848, 1691
PsuI	RGATCY	1 cut(s)	246
PsyI	GACNNNGTC	1 cut(s)	2041
PvuII	CAGCTG	2 cut(s)	1277, 2048
RsaI	GTAC	6 cut(s)	237, 1134, 1322, 1341, 1590, 2358
RsaNI	GTAC	6 cut(s)	236, 1133, 1321, 1340, 1589, 2357
RseI	CAYNNNNRTG	3 cut(s)	1044, 1804, 1961
SacI	GAGCTC	1 cut(s)	66
SapI	GCTCTTC	1 cut(s)	315
SaqAI	TTAA	7 cut(s)	633, 717, 984, 1466, 1538, 2160, 2407
Sau3AI	GATC	4 cut(s)	246, 394, 1030, 2003
Sau96I	GGNCC	3 cut(s)	996, 1349, 2019
SchI	GAGTC	5 cut(s)	688, 1578, 1694, 1736, 2318
ScrFI	CCNGG	5 cut(s)	48, 369, 784, 1328, 2371
SduI	GDGCHC	6 cut(s)	23, 66, 658, 896, 1039, 1853
SfaNI	GCATC	7 cut(s)	168, 892, 1080, 1085, 1372, 1794, 1978
SfcI	CTRYAG	3 cut(s)	1005, 1278, 2091
SfoI	GGCGCC	1 cut(s)	190
SgrAI	CRCCGGYG	1 cut(s)	296
SinI	GGWCC	2 cut(s)	996, 1349
SmiMI	CAYNNNNRTG	3 cut(s)	1044, 1804, 1961
SmlI	CTYRAG	2 cut(s)	1196, 2173
SmoI	CTYRAG	2 cut(s)	1196, 2173
SpeI	ACTAGT	1 cut(s)	1594
SseBI	AGGCCT	1 cut(s)	731
SsiI	CCGC	9 cut(s)	137, 291, 294, 407, 563, 840, 885, 1150, 1604
SspDI	GGCGCC	1 cut(s)	188
SspMI	CTAG	7 cut(s)	579, 1226, 1239, 1502, 1595, 1758, 2166
SstI	GAGCTC	1 cut(s)	66
StuI	AGGCCT	1 cut(s)	731
StyD4I	CCNGG	5 cut(s)	46, 367, 782, 1326, 2369
StyI	CCWWGG	6 cut(s)	180, 213, 792, 999, 1354, 1611
TaaI	ACNGT	7 cut(s)	495, 629, 640, 1055, 1117, 1393, 2405
TaiI	ACGT	1 cut(s)	664
TaqI	TCGA	5 cut(s)	478, 590, 600, 2002, 2262
TaqII	GACCGA	1 cut(s)	212
TatI	WGTACW	3 cut(s)	1132, 1320, 1588
TauI	GCSGC	2 cut(s)	296, 842
TfiI	GAWTC	3 cut(s)	587, 597, 818
Tru1I	TTAA	7 cut(s)	633, 717, 984, 1466, 1538, 2160, 2407
Tru9I	TTAA	7 cut(s)	633, 717, 984, 1466, 1538, 2160, 2407
TscAI	CASTG	8 cut(s)	283, 643, 1351, 1696, 1723, 1750, 2040, 2408
TseFI	GTSAC	4 cut(s)	691, 1714, 2035, 2288
Tsp45I	GTSAC	4 cut(s)	691, 1714, 2035, 2288
TspDTI	ATGAA	5 cut(s)	157, 1305, 1867, 2044, 2375
TspRI	CASTG	8 cut(s)	283, 643, 1351, 1696, 1723, 1750, 2040, 2408
Tth111I	GACNNNGTC	1 cut(s)	2041
Van91I	CCANNNNNTGG	1 cut(s)	1333
VpaK11BI	GGWCC	2 cut(s)	996, 1349
VspI	ATTAAT	1 cut(s)	1466
XapI	RAATTY	6 cut(s)	355, 445, 505, 1262, 1398, 1553
XbaI	TCTAGA	1 cut(s)	1501
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1262, 2131
XmiI	GTMKAC	2 cut(s)	1572, 1839
XmnI	GAANNNNTTC	2 cut(s)	1509, 2182
XspI	CTAG	7 cut(s)	579, 1226, 1239, 1502, 1595, 1758, 2166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.