Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0006114

Physical Location & Seq

Genomic Coordinates Forward (+)

79385661 .. 79389526

Gene Structure 3866 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG618600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGGCCGGCGCCGAGACCGAGACCGACACCTCCAAGGCCAAACCACGACCCATCGTACGCCTCGGGATCTTCCTCATCTCTCATAGCTTCTTCTTCAGTGTCGTCTTCTCCGCCGCCGGCGTTTTGGCTCTTCTGCTGCTTCCGGTTCTCGCCAAGAACACTTACATCTCCGAGAATTCGCTTATGCCAGGCTCTGTGGCTCCCATGCTTTCCGATCAGGAGGTTGCGGAGGCCAATAGATTGATAGACGATTTGACTGCTTTGAATTCCAAGCCTCTTGGTTCAGTAATAGGAAGTCGAAGACTGGTAGCACAGTATATGTCAAATTCGGGCGCTGAAGTTAGTTTTCACAAGTTCCACCCTCAGATAAATCAGTTTCACCCGCTGCACTTCTTTTCTAGCCCTGATTCGAGAAGAATCGAACAGAATGTCAGTTGTGCATTGCACGGTGTTAACACTGTTGGAATTATAAGAGCACCACGTGGTGATGGGAAGGAAGCTATTGTGTTGGTGACTCCTTTCAATTCAGCGAAAGTTAACAAGAATGAGGCCTTATCTTTGGGAATTGCATACTCAGTATTTTCTTTGCTTACCAGAGTTCCCTGGCTGGCCAAGGATGTGATATGGCTCGTTGCAGATTCCCAATTTGGTGAGTATGCCGCAGTTTCTGCTTGGCTAAGAGATTATCACACTCCTTTATTCAGCGGACTGGGCACAATAGATGCAGAAATGTGTCCTGAAAGCAATAATCTGCATGGAATGGAAGAGAACCATTTTACAGAAAGGATGACTTATGATGGATTTAAACGGGCTGGGACCATGGCTGCAGCCCTTGTTGTGAAGGTTGGTGATCGGGCTCATCAATATGAGGACAGTCTAAGTATCTATGCGGAGGCATCCAATGGGCAGATGCCAAATCTTGACCTCATCAATACTGTGAATTATTTAGCAGTACATAGGCAAGGTTTGCGGGTAAAGGTGGAGAAATTGAGGTCTTTCCTTGATATGGGATGGCTTGAGACTTTGGGTGAAATGTTTGAATTACTAGGCCATTATGCTAGAAGCATAAATCCCCAATTGAAATTTGGTATCCCAGCTGCAGAGTATATTGAGGGCAGTGCCACACTTGCAAGTTCATTGTACTACCAGGCTTTGGGTGTACCCACTGGTCCCCATGGTGCTTTTCGTGATTACCAAGTTGATGCAATTACTGTGGAAATTTTGCCTAAAGTTTATACTTTGGGTAACAAAAGACAAAATGACTTCCTTCTGCGAAGTGGCCGATTAATTGAAGGAGTTGTGCAATCTGTAAACAACCTTCTAGAAAAGTTTCACCAGTCATTTTTTCTATACCTATTAACATCTCCCAGTAAATTTGTGTCGGTGGGAGTCTACATGATTGCTTTTGTACTACTAGTTGCACCGCTCCCCATGGTGGCTGCCTCTCTCTTTGTAAATGCCAGTAACTCTGATGATAGTCTGAATACAGAGAAACCTGCTCCTTCAGCCACTGCTGCTGACTCTGCTCCTTTGGTCACTGCTTATGAGTCTTCTCCTTTACTCAGTGCTGCTAATTCTAGTTCTTTGGCCACTACTGCTGGTTGCATCACTCTCAACTCATGGAAATGGCTTTATGCAGCAAAGAAATCTTTTGTTGTCTACTTGTGGGGCTCTGTTGTTTCGTTGCTCCCGTATTTCATCTGTCAAATACCCAATTGCACTCCAACAACCAGCTTTATAATCTGGGTTTTGCTTTCAATACTCAGCCTTGTGGTCATGTATATGATTTTGGCTTCTCCATTTTCTGATGCTAATAACTCTCGATCACAAAAAGAGTGGGCCATCCTAAAATCAGTGACTATGTCAGCTGCATTCATTGGTTTGTGTCTCATGTCAATCATCAACTTCGCTACAGCAGAAATTGGGGGCTTACTGATTGTCCCCATGTGTTTGATGGCTTATCCTTTGAAGCTTGATGTTAAAACTAGGAGCTTGAGAACAATTTCAAGAGCAGCTTGTAATCTCGTTCTGGGGATTGTAGGATTTCCACCAGTTACTTTTATAGTTCTGAAAGGAGCATTCGAGGGTTACAGCAGCATTAGTGTCGGTGACTTCTGGTCTTGGGTGGAGTCTCTGTGGGTTTGGAATAGTGCCACTTACCTATATATTGGTGTGGTACACCTGCCATCCTGGGTTTTGTGTATTCATATATTGTTTCACCACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003923 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016255 GO:0016787 GO:0019538 GO:0019637 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0042765 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0071704 GO:0071944 GO:0090407 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Gaa1

Protein Analysis

742

Amino Acids

81.36

Weight (kDa)

6.66

Isoelectric Point (pI)

41.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gaa1	PF04114	149 - 734	4.1e-99	Gaa1-like, GPI transamidase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19130 AT5G19130
fragaria_vesca	FvH4_6g51172 FvH4_6g51190 FvH4_6g51190 FvH4_6g51190
malus_domestica	MD09G1027000.v1.1 MD17G1027000.v1.1
prunus_persica	Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1
pyrus_communis	pycom111g02110 pycom17g02210
rosa_chinensis	RchiOBHm_Chr2g0172791
rosa_laevigata	RLG00000022137
rosa_multiflora	Rmu_sc0002979.1_g000012 Rmu_sc0010744.1_g000001 Rmu_sc0027475.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079510
rosa_rugosa	Rorug02G0561700
rosa_samantha	Rh2AG639400 Rh2BG652800 Rh2CG618600 Rh2DG666500
rosa_wichuraiana	Rw2G052780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	470, 1739
AarI	CACCTGC	1 cut(s)	2190
Acc36I	ACCTGC	2 cut(s)	1504, 2190
AccB1I	GGYRCC	1 cut(s)	8
AccB7I	CCANNNNNTGG	1 cut(s)	1153
AccBSI	CCGCTC	1 cut(s)	1426
AccI	GTMKAC	2 cut(s)	1392, 1659
AciI	CCGC	9 cut(s)	111, 114, 227, 383, 660, 705, 890, 970, 1424
AclWI	GGATC	1 cut(s)	74
AcoI	YGGCCR	4 cut(s)	3, 609, 1279, 1587
AcsI	RAATTY	6 cut(s)	175, 265, 325, 1082, 1218, 1373
AcuI	CTGAAG	3 cut(s)	79, 357, 1488
AcvI	CACGTG	1 cut(s)	482
AcyI	GRCGYC	1 cut(s)	9
AdeI	CACNNNGTG	2 cut(s)	482, 485
AfaI	GTAC	6 cut(s)	57, 954, 1142, 1161, 1410, 2178
AfiI	CCNNNNNNNGG	3 cut(s)	1006, 1153, 1435
AgsI	TTSAA	8 cut(s)	265, 523, 1040, 1081, 1292, 1758, 1969, 2007
AhdI	GACNNNNNGTC	1 cut(s)	2116
AhlI	ACTAGT	1 cut(s)	1414
AjnI	CCWGG	4 cut(s)	187, 602, 1146, 2189
AluBI	AGCT	8 cut(s)	87, 500, 1097, 1734, 1868, 1972, 1992, 2015
AluI	AGCT	8 cut(s)	87, 500, 1097, 1734, 1868, 1972, 1992, 2015
Alw21I	GWGCWC	1 cut(s)	478
Alw26I	GTCTC	5 cut(s)	8, 14, 1013, 1892, 2136
AlwI	GGATC	1 cut(s)	74
AlwNI	CAGNNNCTG	3 cut(s)	194, 668, 1511
Ama87I	CYCGRG	1 cut(s)	62
AoxI	GGCC	9 cut(s)	3, 36, 231, 549, 609, 1048, 1279, 1587, 1839
ApoI	RAATTY	6 cut(s)	175, 265, 325, 1082, 1218, 1373
ArsI	GACNNNNNNTTYG	2 cut(s)	414, 446
AseI	ATTAAT	1 cut(s)	1286
Asp700I	GAANNNNTTC	2 cut(s)	1329, 2002
AspLEI	GCGC	2 cut(s)	11, 335
AspS9I	GGNCC	3 cut(s)	816, 1169, 1839
AsuHPI	GGTGA	9 cut(s)	371, 497, 523, 662, 860, 1040, 1325, 2120, 2210
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	2 cut(s)	816, 1169
BaeGI	GKGCMC	1 cut(s)	716
BalI	TGGCCA	2 cut(s)	611, 1589
BanI	GGYRCC	1 cut(s)	8
BanII	GRGCYC	2 cut(s)	859, 1673
BarI	GAAGNNNNNNTAC	2 cut(s)	1302, 1334
BbrPI	CACGTG	1 cut(s)	482
BbsI	GAAGAC	3 cut(s)	97, 307, 1542
Bbv12I	GWGCWC	1 cut(s)	478
BccI	CCATC	7 cut(s)	59, 482, 791, 1005, 1850, 1948, 2194
BcgI	CGANNNNNNTGC	4 cut(s)	239, 273, 2086, 2120
BciT130I	CCWGG	4 cut(s)	189, 604, 1148, 2191
BciVI	GTATCC	1 cut(s)	1100
BcoDI	GTCTC	5 cut(s)	8, 14, 1013, 1892, 2136
BcuI	ACTAGT	1 cut(s)	1414
BfaI	CTAG	7 cut(s)	399, 1046, 1059, 1322, 1415, 1578, 1986
BfmI	CTRYAG	3 cut(s)	825, 1098, 1911
BfoI	RGCGCY	2 cut(s)	12, 336
BfuAI	ACCTGC	2 cut(s)	1504, 2190
BfuI	GTATCC	1 cut(s)	1100
Bme1390I	CCNGG	4 cut(s)	189, 604, 1148, 2191
Bme18I	GGWCC	2 cut(s)	816, 1169
BmeRI	GACNNNNNGTC	1 cut(s)	2116
BmeT110I	CYCGRG	1 cut(s)	62
BmgT120I	GGNCC	3 cut(s)	816, 1169, 1839
BmiI	GGNNCC	4 cut(s)	10, 201, 817, 1171
BmrFI	CCNGG	4 cut(s)	189, 604, 1148, 2191
BmrI	ACTGGG	2 cut(s)	719, 1362
BmsI	GCATC	6 cut(s)	712, 900, 905, 1192, 1614, 1798
BmuI	ACTGGG	2 cut(s)	719, 1362
BpiI	GAAGAC	3 cut(s)	97, 307, 1542
BpuEI	CTTGAG	2 cut(s)	1037, 2014
BsaAI	YACGTR	1 cut(s)	482
BsaHI	GRCGYC	1 cut(s)	9
BsaI	GGTCTC	2 cut(s)	8, 14
BsaJI	CCNNGG	8 cut(s)	33, 61, 602, 612, 819, 1174, 1431, 2190
BsaWI	WCCGGW	1 cut(s)	142
BsaXI	ACNNNNNCTCC	2 cut(s)	2120, 2150
Bsc4I	CCNNNNNNNGG	3 cut(s)	1006, 1153, 1435
Bse118I	RCCGGY	2 cut(s)	5, 116
Bse1I	ACTGG	7 cut(s)	309, 714, 1171, 1336, 1368, 1461, 2051
Bse3DI	GCAATG	1 cut(s)	440
BseBI	CCWGG	4 cut(s)	189, 604, 1148, 2191
BseDI	CCNNGG	8 cut(s)	33, 61, 602, 612, 819, 1174, 1431, 2190
BseGI	GGATG	6 cut(s)	622, 792, 896, 1016, 1842, 2186
BseLI	CCNNNNNNNGG	3 cut(s)	1006, 1153, 1435
BseMI	GCAATG	1 cut(s)	440
BseMII	CTCAG	4 cut(s)	377, 588, 1576, 1777
BseNI	ACTGG	7 cut(s)	309, 714, 1171, 1336, 1368, 1461, 2051
BseSI	GKGCMC	1 cut(s)	716
BseYI	CCCAGC	2 cut(s)	812, 1093
BsgI	GTGCAG	1 cut(s)	371
BshFI	GGCC	9 cut(s)	5, 38, 233, 551, 611, 1050, 1281, 1589, 1841
BshNI	GGYRCC	1 cut(s)	8
BsiHKAI	GWGCWC	1 cut(s)	478
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	3 cut(s)	6, 117, 143
BsiWI	CGTACG	1 cut(s)	55
BslFI	GGGAC	3 cut(s)	829, 1155, 1925
BslI	CCNNNNNNNGG	3 cut(s)	1006, 1153, 1435
BsmAI	GTCTC	5 cut(s)	8, 14, 1013, 1892, 2136
BsmFI	GGGAC	3 cut(s)	829, 1155, 1925
BsmI	GAATGC	2 cut(s)	1871, 2078
BsnI	GGCC	9 cut(s)	5, 38, 233, 551, 611, 1050, 1281, 1589, 1841
Bso31I	GGTCTC	2 cut(s)	8, 14
BsoBI	CYCGRG	1 cut(s)	62
Bsp1286I	GDGCHC	4 cut(s)	478, 716, 859, 1673
Bsp143I	GATC	4 cut(s)	66, 214, 850, 1823
Bsp19I	CCATGG	3 cut(s)	819, 1174, 1431
BspACI	CCGC	9 cut(s)	111, 114, 227, 383, 660, 705, 890, 970, 1424
BspANI	GGCC	9 cut(s)	5, 38, 233, 551, 611, 1050, 1281, 1589, 1841
BspCNI	CTCAG	4 cut(s)	376, 587, 1575, 1776
BspLI	GGNNCC	4 cut(s)	10, 201, 817, 1171
BspMAI	CTGCAG	2 cut(s)	829, 1102
BspMI	ACCTGC	2 cut(s)	1504, 2190
BspPI	GGATC	1 cut(s)	74
BspQI	GCTCTTC	1 cut(s)	135
BspT107I	GGYRCC	1 cut(s)	8
BspTNI	GGTCTC	2 cut(s)	8, 14
BsrBI	CCGCTC	1 cut(s)	1426
BsrDI	GCAATG	1 cut(s)	440
BsrFI	RCCGGY	2 cut(s)	5, 116
BsrI	ACTGG	7 cut(s)	309, 714, 1171, 1336, 1368, 1461, 2051
BssAI	RCCGGY	2 cut(s)	5, 116
BssECI	CCNNGG	8 cut(s)	33, 61, 602, 612, 819, 1174, 1431, 2190
BssMI	GATC	4 cut(s)	66, 214, 850, 1823
BssNI	GRCGYC	1 cut(s)	9
BssT1I	CCWWGG	5 cut(s)	33, 612, 819, 1174, 1431
Bst2UI	CCWGG	4 cut(s)	189, 604, 1148, 2191
Bst4CI	ACNGT	7 cut(s)	315, 449, 460, 875, 937, 1213, 2225
Bst6I	CTCTTC	2 cut(s)	135, 759
BstACI	GRCGYC	1 cut(s)	9
BstAPI	GCANNNNNTGC	2 cut(s)	668, 967
BstBAI	YACGTR	1 cut(s)	482
BstC8I	GCNNGC	3 cut(s)	7, 118, 609
BstDEI	CTNAG	6 cut(s)	363, 574, 677, 878, 1562, 1763
BstDSI	CCRYGG	3 cut(s)	819, 1174, 1431
BstF5I	GGATG	6 cut(s)	622, 792, 896, 1016, 1842, 2186
BstH2I	RGCGCY	2 cut(s)	12, 336
BstHHI	GCGC	2 cut(s)	11, 335
BstKTI	GATC	4 cut(s)	69, 217, 853, 1826
BstMAI	GTCTC	5 cut(s)	8, 14, 1013, 1892, 2136
BstMBI	GATC	4 cut(s)	66, 214, 850, 1823
BstMWI	GCNNNNNNNGC	8 cut(s)	668, 711, 967, 1127, 1505, 1514, 1523, 1595
BstNI	CCWGG	4 cut(s)	189, 604, 1148, 2191
BstSCI	CCNGG	4 cut(s)	187, 602, 1146, 2189
BstSFI	CTRYAG	3 cut(s)	825, 1098, 1911
BstSLI	GKGCMC	1 cut(s)	716
BstV2I	GAAGAC	3 cut(s)	97, 307, 1542
BstX2I	RGATCY	1 cut(s)	66
BstYI	RGATCY	1 cut(s)	66
BsuI	GTATCC	1 cut(s)	1100
BsuRI	GGCC	9 cut(s)	5, 38, 233, 551, 611, 1050, 1281, 1589, 1841
BtgI	CCRYGG	3 cut(s)	819, 1174, 1431
BtsCI	GGATG	6 cut(s)	622, 792, 896, 1016, 1842, 2186
BtsI	GCAGTG	3 cut(s)	1123, 1509, 1536
BtsIMutI	CAGTG	9 cut(s)	103, 456, 1123, 1164, 1509, 1536, 1570, 1860, 2221
BveI	ACCTGC	2 cut(s)	1504, 2190
Cac8I	GCNNGC	3 cut(s)	7, 118, 609
CaiI	CAGNNNCTG	3 cut(s)	194, 668, 1511
CfoI	GCGC	2 cut(s)	11, 335
Cfr10I	RCCGGY	2 cut(s)	5, 116
Cfr13I	GGNCC	3 cut(s)	816, 1169, 1839
Csp6I	GTAC	6 cut(s)	56, 953, 1141, 1160, 1409, 2177
CspCI	CAANNNNNGTGG	4 cut(s)	1194, 1229, 1817, 1852
CviQI	GTAC	6 cut(s)	56, 953, 1141, 1160, 1409, 2177
DdeI	CTNAG	6 cut(s)	363, 574, 677, 878, 1562, 1763
DinI	GGCGCC	1 cut(s)	10
DpnI	GATC	4 cut(s)	68, 216, 852, 1825
DpnII	GATC	4 cut(s)	66, 214, 850, 1823
DraI	TTTAAA	1 cut(s)	805
DraIII	CACNNNGTG	2 cut(s)	482, 485
DriI	GACNNNNNGTC	1 cut(s)	2116
EaeI	YGGCCR	4 cut(s)	3, 609, 1279, 1587
Eam1104I	CTCTTC	2 cut(s)	135, 759
Eam1105I	GACNNNNNGTC	1 cut(s)	2116
EarI	CTCTTC	2 cut(s)	135, 759
EciI	GGCGGA	1 cut(s)	100
Eco130I	CCWWGG	5 cut(s)	33, 612, 819, 1174, 1431
Eco147I	AGGCCT	1 cut(s)	551
Eco24I	GRGCYC	2 cut(s)	859, 1673
Eco31I	GGTCTC	2 cut(s)	8, 14
Eco47I	GGWCC	2 cut(s)	816, 1169
Eco57I	CTGAAG	3 cut(s)	79, 357, 1488
Eco72I	CACGTG	1 cut(s)	482
Eco88I	CYCGRG	1 cut(s)	62
EcoRI	GAATTC	2 cut(s)	175, 265
EcoRII	CCWGG	4 cut(s)	187, 602, 1146, 2189
EcoT14I	CCWWGG	5 cut(s)	33, 612, 819, 1174, 1431
EcoT38I	GRGCYC	2 cut(s)	859, 1673
EgeI	GGCGCC	1 cut(s)	10
EheI	GGCGCC	1 cut(s)	10
ErhI	CCWWGG	5 cut(s)	33, 612, 819, 1174, 1431
FalI	AAGNNNNNCTT	4 cut(s)	775, 807, 1999, 2031
FaqI	GGGAC	3 cut(s)	829, 1155, 1925
FauI	CCCGC	2 cut(s)	390, 963
FblI	GTMKAC	2 cut(s)	1392, 1659
FokI	GGATG	6 cut(s)	629, 799, 883, 1023, 1829, 2173
FriOI	GRGCYC	2 cut(s)	859, 1673
FspBI	CTAG	7 cut(s)	399, 1046, 1059, 1322, 1415, 1578, 1986
GlaI	GCGC	2 cut(s)	10, 334
GsaI	CCCAGC	2 cut(s)	816, 1097
HaeII	RGCGCY	2 cut(s)	12, 336
HaeIII	GGCC	9 cut(s)	5, 38, 233, 551, 611, 1050, 1281, 1589, 1841
HapII	CCGG	3 cut(s)	6, 117, 143
HhaI	GCGC	2 cut(s)	11, 335
Hin1I	GRCGYC	1 cut(s)	9
Hin6I	GCGC	2 cut(s)	9, 333
HinP1I	GCGC	2 cut(s)	9, 333
HincII	GTYRAC	2 cut(s)	454, 538
HindII	GTYRAC	2 cut(s)	454, 538
HindIII	AAGCTT	1 cut(s)	1970
HinfI	GANTC	8 cut(s)	407, 417, 514, 638, 1389, 1520, 1547, 2129
HpaI	GTTAAC	2 cut(s)	454, 538
HpaII	CCGG	3 cut(s)	6, 117, 143
HphI	GGTGA	9 cut(s)	371, 497, 523, 662, 860, 1040, 1325, 2120, 2210
Hpy166II	GTNNAC	7 cut(s)	454, 538, 1160, 1312, 1393, 1660, 2179
Hpy188I	TCNGA	7 cut(s)	172, 214, 366, 1471, 1482, 1807, 2070
Hpy188III	TCNNGA	9 cut(s)	64, 218, 411, 737, 920, 1187, 1322, 1821, 2007
Hpy8I	GTNNAC	7 cut(s)	454, 538, 1160, 1312, 1393, 1660, 2179
HpyAV	CCTTC	6 cut(s)	487, 835, 1277, 1286, 1328, 1512
HpyCH4III	ACNGT	7 cut(s)	315, 449, 460, 875, 937, 1213, 2225
HpyCH4IV	ACGT	1 cut(s)	481
HpyF10VI	GCNNNNNNNGC	8 cut(s)	668, 711, 967, 1127, 1505, 1514, 1523, 1595
HpyF3I	CTNAG	6 cut(s)	363, 574, 677, 878, 1562, 1763
HpySE526I	ACGT	1 cut(s)	481
Hsp92I	GRCGYC	1 cut(s)	9
HspAI	GCGC	2 cut(s)	9, 333
KasI	GGCGCC	1 cut(s)	8
KroI	GCCGGC	2 cut(s)	5, 116
KroNI	GCCGGC	2 cut(s)	7, 118
KspAI	GTTAAC	2 cut(s)	454, 538
Kzo9I	GATC	4 cut(s)	66, 214, 850, 1823
LguI	GCTCTTC	1 cut(s)	135
LmnI	GCTCC	7 cut(s)	205, 1431, 1504, 1531, 1692, 1989, 2075
LweI	GCATC	6 cut(s)	712, 900, 905, 1192, 1614, 1798
MaeI	CTAG	7 cut(s)	399, 1046, 1059, 1322, 1415, 1578, 1986
MaeII	ACGT	1 cut(s)	481
MaeIII	GTNAC	8 cut(s)	511, 1244, 1463, 1534, 1855, 2053, 2087, 2108
MalI	GATC	4 cut(s)	68, 216, 852, 1825
MbiI	CCGCTC	1 cut(s)	1426
MboI	GATC	4 cut(s)	66, 214, 850, 1823
MboII	GAAGA	9 cut(s)	61, 82, 85, 97, 122, 312, 426, 776, 1542
MfeI	CAATTG	2 cut(s)	1076, 1714
MflI	RGATCY	1 cut(s)	66
MhlI	GDGCHC	4 cut(s)	478, 716, 859, 1673
MlsI	TGGCCA	2 cut(s)	611, 1589
MluNI	TGGCCA	2 cut(s)	611, 1589
Mly113I	GGCGCC	1 cut(s)	9
MlyI	GAGTC	5 cut(s)	508, 1398, 1514, 1556, 2138
MmeI	TCCRAC	2 cut(s)	442, 1748
Mox20I	TGGCCA	2 cut(s)	611, 1589
MreI	CGCCGGCG	1 cut(s)	116
MroNI	GCCGGC	2 cut(s)	5, 116
MroXI	GAANNNNTTC	2 cut(s)	1329, 2002
MscI	TGGCCA	2 cut(s)	611, 1589
MseI	TTAA	7 cut(s)	453, 537, 804, 1286, 1358, 1980, 2227
MslI	CAYNNNNRTG	3 cut(s)	864, 1624, 1781
Msp20I	TGGCCA	2 cut(s)	611, 1589
MspA1I	CMGCKG	4 cut(s)	385, 705, 1097, 1868
MspI	CCGG	3 cut(s)	6, 117, 143
MspR9I	CCNGG	4 cut(s)	189, 604, 1148, 2191
MunI	CAATTG	2 cut(s)	1076, 1714
Mva1269I	GAATGC	2 cut(s)	1871, 2078
MvaI	CCWGG	4 cut(s)	189, 604, 1148, 2191
MwoI	GCNNNNNNNGC	8 cut(s)	668, 711, 967, 1127, 1505, 1514, 1523, 1595
NaeI	GCCGGC	2 cut(s)	7, 118
NarI	GGCGCC	1 cut(s)	9
NcoI	CCATGG	3 cut(s)	819, 1174, 1431
NdeII	GATC	4 cut(s)	66, 214, 850, 1823
NgoMIV	GCCGGC	2 cut(s)	5, 116
NlaIV	GGNNCC	4 cut(s)	10, 201, 817, 1171
NmeAIII	GCCGAG	1 cut(s)	37
NmuCI	GTSAC	4 cut(s)	511, 1534, 1855, 2108
PaqCI	CACCTGC	1 cut(s)	2190
PceI	AGGCCT	1 cut(s)	551
PciSI	GCTCTTC	1 cut(s)	135
PcsI	WCGNNNNNNNCGW	1 cut(s)	1688
PctI	GAATGC	2 cut(s)	1871, 2078
PdiI	GCCGGC	2 cut(s)	7, 118
PdmI	GAANNNNTTC	2 cut(s)	1329, 2002
PfeI	GAWTC	3 cut(s)	407, 417, 638
Pfl23II	CGTACG	1 cut(s)	55
PflFI	GACNNNGTC	1 cut(s)	1861
PflMI	CCANNNNNTGG	1 cut(s)	1153
PleI	GAGTC	5 cut(s)	508, 1397, 1514, 1555, 2137
PluTI	GGCGCC	1 cut(s)	12
PmaCI	CACGTG	1 cut(s)	482
PmlI	CACGTG	1 cut(s)	482
PpsI	GAGTC	5 cut(s)	508, 1397, 1514, 1555, 2137
Ppu21I	YACGTR	1 cut(s)	482
PshBI	ATTAAT	1 cut(s)	1286
PsiI	TTATAA	2 cut(s)	470, 1739
Psp6I	CCWGG	4 cut(s)	187, 602, 1146, 2189
PspCI	CACGTG	1 cut(s)	482
PspFI	CCCAGC	2 cut(s)	812, 1093
PspGI	CCWGG	4 cut(s)	187, 602, 1146, 2189
PspLI	CGTACG	1 cut(s)	55
PspN4I	GGNNCC	4 cut(s)	10, 201, 817, 1171
PspPI	GGNCC	3 cut(s)	816, 1169, 1839
PstI	CTGCAG	2 cut(s)	829, 1102
PstNI	CAGNNNCTG	3 cut(s)	194, 668, 1511
PsuI	RGATCY	1 cut(s)	66
PsyI	GACNNNGTC	1 cut(s)	1861
PvuII	CAGCTG	2 cut(s)	1097, 1868
RsaI	GTAC	6 cut(s)	57, 954, 1142, 1161, 1410, 2178
RsaNI	GTAC	6 cut(s)	56, 953, 1141, 1160, 1409, 2177
RseI	CAYNNNNRTG	3 cut(s)	864, 1624, 1781
SapI	GCTCTTC	1 cut(s)	135
SaqAI	TTAA	7 cut(s)	453, 537, 804, 1286, 1358, 1980, 2227
Sau3AI	GATC	4 cut(s)	66, 214, 850, 1823
Sau96I	GGNCC	3 cut(s)	816, 1169, 1839
SchI	GAGTC	5 cut(s)	508, 1398, 1514, 1556, 2138
ScrFI	CCNGG	4 cut(s)	189, 604, 1148, 2191
SduI	GDGCHC	4 cut(s)	478, 716, 859, 1673
SfaNI	GCATC	6 cut(s)	712, 900, 905, 1192, 1614, 1798
SfcI	CTRYAG	3 cut(s)	825, 1098, 1911
SfoI	GGCGCC	1 cut(s)	10
SgrAI	CRCCGGYG	1 cut(s)	116
SinI	GGWCC	2 cut(s)	816, 1169
SmiMI	CAYNNNNRTG	3 cut(s)	864, 1624, 1781
SmlI	CTYRAG	2 cut(s)	1016, 1993
SmoI	CTYRAG	2 cut(s)	1016, 1993
SpeI	ACTAGT	1 cut(s)	1414
SseBI	AGGCCT	1 cut(s)	551
SsiI	CCGC	9 cut(s)	111, 114, 227, 383, 660, 705, 890, 970, 1424
SspDI	GGCGCC	1 cut(s)	8
SspMI	CTAG	7 cut(s)	399, 1046, 1059, 1322, 1415, 1578, 1986
StuI	AGGCCT	1 cut(s)	551
StyD4I	CCNGG	4 cut(s)	187, 602, 1146, 2189
StyI	CCWWGG	5 cut(s)	33, 612, 819, 1174, 1431
TaaI	ACNGT	7 cut(s)	315, 449, 460, 875, 937, 1213, 2225
TaiI	ACGT	1 cut(s)	484
TaqI	TCGA	5 cut(s)	298, 410, 420, 1822, 2082
TaqII	GACCGA	2 cut(s)	32, 38
TatI	WGTACW	3 cut(s)	952, 1140, 1408
TauI	GCSGC	2 cut(s)	116, 662
TfiI	GAWTC	3 cut(s)	407, 417, 638
Tru1I	TTAA	7 cut(s)	453, 537, 804, 1286, 1358, 1980, 2227
Tru9I	TTAA	7 cut(s)	453, 537, 804, 1286, 1358, 1980, 2227
TscAI	CASTG	9 cut(s)	103, 463, 1123, 1171, 1516, 1543, 1570, 1860, 2228
TseFI	GTSAC	4 cut(s)	511, 1534, 1855, 2108
Tsp45I	GTSAC	4 cut(s)	511, 1534, 1855, 2108
TspDTI	ATGAA	4 cut(s)	1125, 1687, 1864, 2195
TspRI	CASTG	9 cut(s)	103, 463, 1123, 1171, 1516, 1543, 1570, 1860, 2228
Tth111I	GACNNNGTC	1 cut(s)	1861
Van91I	CCANNNNNTGG	1 cut(s)	1153
VpaK11BI	GGWCC	2 cut(s)	816, 1169
VspI	ATTAAT	1 cut(s)	1286
XapI	RAATTY	6 cut(s)	175, 265, 325, 1082, 1218, 1373
XbaI	TCTAGA	1 cut(s)	1321
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1082, 1951
XmiI	GTMKAC	2 cut(s)	1392, 1659
XmnI	GAANNNNTTC	2 cut(s)	1329, 2002
XspI	CTAG	7 cut(s)	399, 1046, 1059, 1322, 1415, 1578, 1986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.