Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006114

Physical Location & Seq

Genomic Coordinates Reverse (-)

81254846 .. 81258665

Gene Structure 3820 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022137

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGCCGCCGAGGCCGAGAAGGCCAAACCACGACCTATCGTACGGCTCGGGATCTTCCTCATCTCTCATAGCTTCTTCTTCAGTGTTGTCTTCTCCGCCGCCGGGGTTTTGGCTCTTCTGCTGCTTCCGGTTCTCGCCAAGAACACTTACATCTCCGAGAATTCGCTTATGCCAGGCTCTGTGGCTCCCATGCTTTCCGATCAGGAGGTTGCGGAGGCGAATAGATTGATAGACGATTTGACTGCTTTGAATTCCAAGCCTCTTGGTTCAGTAATAGGAAGTCGAAGACTGGTAGCACAGTATATGTCAAATTCAGGAGCTGAAGTTAGTTTTCACAAGTTCCACCCTCAGATAAATCAGTTTCACCCGCTGCACTTCTTTTGTAGCCCTGATTCGAGAAGAATCGAACAGAATGTCAGTTGTGCATTGCACGGTGTCAACACTGTTGGAATTATAAGAGCACCACGTGGTGATGGGAAGGAAGCTATTGTATTGGTGACTCCTTTCAATTCTGCAAAAGTTAACAAGAATGAGGCCTTATCTTTGGGAATTGCATACTCGGTATTTTCCTTGCTTACCAGAGTTCCTTGGCTGGCCAAGGATGTAATATGGCTCGTTGCAGATTCCCAATTTGGAGAGTATGCCGCAGTGTCTGCTTGGCTAAGAGACTATCACACCCCTGTATTCAGTGGACTGGGCACAATAGATGCAGAAATGTGTCCTGAAAGCAATAATCTGCATGGGATGGAAGAGAACCATTTTACAGAAAGGATTACTTATGATGGATTTAAACGGGCTGGGACCATGGCTGCAGCCCTTGTTGTGAAGGTTGGTGATCGGGCTCATCAATATGAGGACAGTCTAAGTATCTATGCTGAGGCATCCAATGGGCAGATGCCAAATCTTGACCTCATCAATACTGTGAATTATTTAGCAGTACATAGGCAAGGTTTGCGGGTAAAGGTGGAGAAATTGAGGTCTTTACTTGATATGGGATGGCTTGAGACTTTGGGTGAAATGTTTGAATTACTAGGCCATTATGCTAGAAGCATAAATCCCCAATTGAAATTTGGTATCCCAGCTGCAGAGTATATTGAGGGTAGTGCCACACTTGCAAGTTCATTGTACTACCAGGCTTTGGGTGTACCCACTGGTCCCCATGGTGCTTTTCGTGATTACCAAGTTGATGCAATTACTGTGGAAATTTTGCCTAAAGTTTATACTTTGGGTAACAAAAGACAAAATGACTTTCTTCTGCGAAGTGGCCGATTAATTGAAGGAGTTGTGCAATCTGTAAACAACCTTCTAGAGAAGTTTCACCAGTCATTTTTTCTATACCTATTAACATCTCCCAGTAAATTTGTGTCGGTGGGAGTCTACATGATTGCTTTTGTACTACTAGTTGCACCGCTCCCCATGGTGGCTGCCTCTCTCTTTGTAAATGCCAGTAACTCTGATGATAGTCTGAATACAGAGAAACCTGCTCCTTCAGCCATTGCTGCTGATTCTGCTCCTTCGGTCACTGCTTATGAGTCTTCGCCTTTGCTCGGTGGTGCTAATTCTAGTTCTTTGGCCACTACTGCTGGTTGCATCATTCTCAGCTCATGGAAATGGCTTTATACAGCAAAGAAATCTTTTGTTGTCTACTTGTGGGGCTCTGTTGTTTCGTTACTCCCGTATTTCATCTGTCAAGTACCCAATTGCACTCCAACAACCAGTTTTATAATCTGGGTTTTGCTTTCAATACTCAGCCTTGTGGTCATGTGTATGATTTTGGCTTCTCCATTTTCTGATGCTAATAACTCTCGATCACAAAAAGAGTGGGCCATCCTAAAATCAGTGACTATGTCAGCTGCATTCATTGGTTTGTGTCTCATGTCAATCATCAACTTCGCTACAGCAGAAATTGGGGGCTTACTGATTGTCCCCATGTGTTTGATGGCTCATCCTTTGAAGCTTGATGTTAAAACTAGGAGCTTGAGAACAATTTCAAGAGCAGCTTGTAATCTCGTTCTGGGGATTGTAGGATTTCCGCCAGTTACTTTTATAGTTCTGAAAGGAGCATTTGAGGGTTACAGCAGCATTAGTGTCGGTGGCTTCTGGTCTTGGGTGGAGTCTCTGTGGGTTTGGAATAGTGCCACTTTCCTATATATTGGTGTGGTACACCTGCCATCCTGGGTTTTGTGTATTCATATATTGTTTCACCACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003923 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016255 GO:0016787 GO:0019538 GO:0019637 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0042765 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0071704 GO:0071944 GO:0090407 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Gaa1

Protein Analysis

738

Amino Acids

80.6

Weight (kDa)

7.02

Isoelectric Point (pI)

42.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gaa1	PF04114	144 - 729	6e-99	Gaa1-like, GPI transamidase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19130 AT5G19130
fragaria_vesca	FvH4_6g51172 FvH4_6g51190 FvH4_6g51190 FvH4_6g51190
malus_domestica	MD09G1027000.v1.1 MD17G1027000.v1.1
prunus_persica	Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1
pyrus_communis	pycom111g02110 pycom17g02210
rosa_chinensis	RchiOBHm_Chr2g0172791
rosa_laevigata	RLG00000022137
rosa_multiflora	Rmu_sc0002979.1_g000012 Rmu_sc0010744.1_g000001 Rmu_sc0027475.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079510
rosa_rugosa	Rorug02G0561700
rosa_samantha	Rh2AG639400 Rh2BG652800 Rh2CG618600 Rh2DG666500
rosa_wichuraiana	Rw2G052780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	455, 1724
AarI	CACCTGC	1 cut(s)	2175
Acc36I	ACCTGC	2 cut(s)	1489, 2175
AccB7I	CCANNNNNTGG	1 cut(s)	1138
AccBSI	CCGCTC	1 cut(s)	1411
AccI	GTMKAC	2 cut(s)	1377, 1644
AciI	CCGC	9 cut(s)	6, 96, 99, 212, 368, 645, 955, 1409, 2033
AclWI	GGATC	1 cut(s)	59
AcoI	YGGCCR	4 cut(s)	3, 594, 1264, 1572
AcsI	RAATTY	6 cut(s)	160, 250, 310, 1067, 1203, 1358
AcuI	CTGAAG	3 cut(s)	64, 342, 1473
AcvI	CACGTG	1 cut(s)	467
AdeI	CACNNNGTG	2 cut(s)	467, 470
AfaI	GTAC	7 cut(s)	42, 939, 1127, 1146, 1395, 1695, 2163
AfiI	CCNNNNNNNGG	4 cut(s)	102, 1138, 1420, 1547
AgsI	TTSAA	8 cut(s)	250, 508, 1025, 1066, 1277, 1743, 1954, 1992
AhlI	ACTAGT	1 cut(s)	1399
AjnI	CCWGG	3 cut(s)	172, 1131, 2174
AluBI	AGCT	9 cut(s)	72, 320, 485, 1082, 1602, 1853, 1957, 1977, 2000
AluI	AGCT	9 cut(s)	72, 320, 485, 1082, 1602, 1853, 1957, 1977, 2000
Alw21I	GWGCWC	1 cut(s)	463
Alw26I	GTCTC	4 cut(s)	660, 998, 1877, 2121
AlwI	GGATC	1 cut(s)	59
AlwNI	CAGNNNCTG	3 cut(s)	179, 320, 653
Ama87I	CYCGRG	1 cut(s)	47
AoxI	GGCC	9 cut(s)	3, 12, 21, 534, 594, 1033, 1264, 1572, 1824
ApoI	RAATTY	6 cut(s)	160, 250, 310, 1067, 1203, 1358
ArsI	GACNNNNNNTTYG	2 cut(s)	399, 431
AseI	ATTAAT	1 cut(s)	1271
Asp700I	GAANNNNTTC	1 cut(s)	1987
AspS9I	GGNCC	3 cut(s)	801, 1154, 1824
AsuC2I	CCSGG	1 cut(s)	103
AsuHPI	GGTGA	7 cut(s)	356, 482, 508, 845, 1025, 1310, 2195
AvaI	CYCGRG	1 cut(s)	47
AvaII	GGWCC	2 cut(s)	801, 1154
BaeGI	GKGCMC	1 cut(s)	701
BalI	TGGCCA	2 cut(s)	596, 1574
BanII	GRGCYC	2 cut(s)	844, 1658
BarI	GAAGNNNNNNTAC	2 cut(s)	1287, 1319
BbrPI	CACGTG	1 cut(s)	467
BbsI	GAAGAC	3 cut(s)	82, 292, 1527
Bbv12I	GWGCWC	1 cut(s)	463
BbvCI	CCTCAGC	1 cut(s)	876
BccI	CCATC	7 cut(s)	467, 739, 776, 990, 1835, 1933, 2179
BceAI	ACGGC	1 cut(s)	59
BcgI	CGANNNNNNTGC	4 cut(s)	224, 258, 2071, 2105
BciT130I	CCWGG	3 cut(s)	174, 1133, 2176
BciVI	GTATCC	1 cut(s)	1085
BcnI	CCSGG	1 cut(s)	103
BcoDI	GTCTC	4 cut(s)	660, 998, 1877, 2121
BcuI	ACTAGT	1 cut(s)	1399
BfaI	CTAG	6 cut(s)	1031, 1044, 1307, 1400, 1563, 1971
BfmI	CTRYAG	3 cut(s)	810, 1083, 1896
BfuAI	ACCTGC	2 cut(s)	1489, 2175
BfuI	GTATCC	1 cut(s)	1085
BglI	GCCNNNNNGGC	2 cut(s)	11, 20
Bme1390I	CCNGG	4 cut(s)	103, 174, 1133, 2176
Bme18I	GGWCC	2 cut(s)	801, 1154
BmeT110I	CYCGRG	1 cut(s)	47
BmgT120I	GGNCC	3 cut(s)	801, 1154, 1824
BmiI	GGNNCC	3 cut(s)	186, 802, 1156
BmrFI	CCNGG	4 cut(s)	103, 174, 1133, 2176
BmrI	ACTGGG	2 cut(s)	704, 1347
BmsI	GCATC	6 cut(s)	697, 885, 890, 1177, 1599, 1783
BmuI	ACTGGG	2 cut(s)	704, 1347
BpiI	GAAGAC	3 cut(s)	82, 292, 1527
Bpu10I	CCTNAGC	1 cut(s)	876
BpuEI	CTTGAG	2 cut(s)	1022, 1999
BpuMI	CCSGG	1 cut(s)	103
BsaAI	YACGTR	1 cut(s)	467
BsaJI	CCNNGG	8 cut(s)	9, 102, 587, 597, 804, 1159, 1416, 2175
BsaWI	WCCGGW	1 cut(s)	127
BsaXI	ACNNNNNCTCC	4 cut(s)	309, 339, 2105, 2135
Bsc4I	CCNNNNNNNGG	4 cut(s)	102, 1138, 1420, 1547
Bse1I	ACTGG	8 cut(s)	294, 699, 1156, 1321, 1353, 1446, 1716, 2036
Bse3DI	GCAATG	2 cut(s)	425, 1494
BseBI	CCWGG	3 cut(s)	174, 1133, 2176
BseDI	CCNNGG	8 cut(s)	9, 102, 587, 597, 804, 1159, 1416, 2175
BseGI	GGATG	7 cut(s)	607, 750, 881, 1001, 1827, 1945, 2171
BseLI	CCNNNNNNNGG	4 cut(s)	102, 1138, 1420, 1547
BseMI	GCAATG	2 cut(s)	425, 1494
BseMII	CTCAG	4 cut(s)	362, 867, 1612, 1762
BseNI	ACTGG	8 cut(s)	294, 699, 1156, 1321, 1353, 1446, 1716, 2036
BseSI	GKGCMC	1 cut(s)	701
BseYI	CCCAGC	2 cut(s)	797, 1078
BsgI	GTGCAG	1 cut(s)	356
BshFI	GGCC	9 cut(s)	5, 14, 23, 536, 596, 1035, 1266, 1574, 1826
BsiHKAI	GWGCWC	1 cut(s)	463
BsiHKCI	CYCGRG	1 cut(s)	47
BsiSI	CCGG	2 cut(s)	102, 128
BsiWI	CGTACG	1 cut(s)	40
BslFI	GGGAC	3 cut(s)	814, 1140, 1910
BslI	CCNNNNNNNGG	4 cut(s)	102, 1138, 1420, 1547
BsmAI	GTCTC	4 cut(s)	660, 998, 1877, 2121
BsmFI	GGGAC	3 cut(s)	814, 1140, 1910
BsmI	GAATGC	1 cut(s)	1856
BsnI	GGCC	9 cut(s)	5, 14, 23, 536, 596, 1035, 1266, 1574, 1826
BsoBI	CYCGRG	1 cut(s)	47
Bsp1286I	GDGCHC	4 cut(s)	463, 701, 844, 1658
Bsp143I	GATC	4 cut(s)	51, 199, 835, 1808
Bsp19I	CCATGG	3 cut(s)	804, 1159, 1416
BspACI	CCGC	9 cut(s)	6, 96, 99, 212, 368, 645, 955, 1409, 2033
BspANI	GGCC	9 cut(s)	5, 14, 23, 536, 596, 1035, 1266, 1574, 1826
BspCNI	CTCAG	4 cut(s)	361, 868, 1611, 1761
BspLI	GGNNCC	3 cut(s)	186, 802, 1156
BspMAI	CTGCAG	2 cut(s)	814, 1087
BspMI	ACCTGC	2 cut(s)	1489, 2175
BspPI	GGATC	1 cut(s)	59
BspQI	GCTCTTC	1 cut(s)	120
BsrBI	CCGCTC	1 cut(s)	1411
BsrDI	GCAATG	2 cut(s)	425, 1494
BsrI	ACTGG	8 cut(s)	294, 699, 1156, 1321, 1353, 1446, 1716, 2036
BssECI	CCNNGG	8 cut(s)	9, 102, 587, 597, 804, 1159, 1416, 2175
BssMI	GATC	4 cut(s)	51, 199, 835, 1808
BssT1I	CCWWGG	5 cut(s)	587, 597, 804, 1159, 1416
Bst2UI	CCWGG	3 cut(s)	174, 1133, 2176
Bst4CI	ACNGT	7 cut(s)	300, 434, 445, 860, 922, 1198, 2210
Bst6I	CTCTTC	2 cut(s)	120, 744
BstAPI	GCANNNNNTGC	2 cut(s)	653, 952
BstBAI	YACGTR	1 cut(s)	467
BstC8I	GCNNGC	1 cut(s)	594
BstDEI	CTNAG	6 cut(s)	348, 662, 863, 876, 1598, 1748
BstDSI	CCRYGG	3 cut(s)	804, 1159, 1416
BstF5I	GGATG	7 cut(s)	607, 750, 881, 1001, 1827, 1945, 2171
BstKTI	GATC	4 cut(s)	54, 202, 838, 1811
BstMAI	GTCTC	4 cut(s)	660, 998, 1877, 2121
BstMBI	GATC	4 cut(s)	51, 199, 835, 1808
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 20, 653, 952, 1112, 1490, 1499, 1508, 1580
BstNI	CCWGG	3 cut(s)	174, 1133, 2176
BstSCI	CCNGG	4 cut(s)	101, 172, 1131, 2174
BstSFI	CTRYAG	3 cut(s)	810, 1083, 1896
BstSLI	GKGCMC	1 cut(s)	701
BstV2I	GAAGAC	3 cut(s)	82, 292, 1527
BstX2I	RGATCY	1 cut(s)	51
BstYI	RGATCY	1 cut(s)	51
BsuI	GTATCC	1 cut(s)	1085
BsuRI	GGCC	9 cut(s)	5, 14, 23, 536, 596, 1035, 1266, 1574, 1826
BtgI	CCRYGG	3 cut(s)	804, 1159, 1416
BtsCI	GGATG	7 cut(s)	607, 750, 881, 1001, 1827, 1945, 2171
BtsI	GCAGTG	2 cut(s)	654, 1521
BtsIMutI	CAGTG	8 cut(s)	88, 441, 654, 694, 1149, 1521, 1845, 2206
BveI	ACCTGC	2 cut(s)	1489, 2175
Cac8I	GCNNGC	1 cut(s)	594
CaiI	CAGNNNCTG	3 cut(s)	179, 320, 653
Cfr13I	GGNCC	3 cut(s)	801, 1154, 1824
Csp6I	GTAC	7 cut(s)	41, 938, 1126, 1145, 1394, 1694, 2162
CspCI	CAANNNNNGTGG	4 cut(s)	1179, 1214, 1802, 1837
CviQI	GTAC	7 cut(s)	41, 938, 1126, 1145, 1394, 1694, 2162
DdeI	CTNAG	6 cut(s)	348, 662, 863, 876, 1598, 1748
DpnI	GATC	4 cut(s)	53, 201, 837, 1810
DpnII	GATC	4 cut(s)	51, 199, 835, 1808
DraI	TTTAAA	1 cut(s)	790
DraIII	CACNNNGTG	2 cut(s)	467, 470
EaeI	YGGCCR	4 cut(s)	3, 594, 1264, 1572
Eam1104I	CTCTTC	2 cut(s)	120, 744
EarI	CTCTTC	2 cut(s)	120, 744
EciI	GGCGGA	2 cut(s)	85, 2022
Eco130I	CCWWGG	5 cut(s)	587, 597, 804, 1159, 1416
Eco147I	AGGCCT	1 cut(s)	536
Eco24I	GRGCYC	2 cut(s)	844, 1658
Eco47I	GGWCC	2 cut(s)	801, 1154
Eco57I	CTGAAG	3 cut(s)	64, 342, 1473
Eco72I	CACGTG	1 cut(s)	467
Eco88I	CYCGRG	1 cut(s)	47
EcoRI	GAATTC	2 cut(s)	160, 250
EcoRII	CCWGG	3 cut(s)	172, 1131, 2174
EcoT14I	CCWWGG	5 cut(s)	587, 597, 804, 1159, 1416
EcoT38I	GRGCYC	2 cut(s)	844, 1658
ErhI	CCWWGG	5 cut(s)	587, 597, 804, 1159, 1416
FalI	AAGNNNNNCTT	4 cut(s)	760, 792, 1984, 2016
FaqI	GGGAC	3 cut(s)	814, 1140, 1910
FauI	CCCGC	2 cut(s)	375, 948
FblI	GTMKAC	2 cut(s)	1377, 1644
FokI	GGATG	7 cut(s)	614, 757, 868, 1008, 1814, 1932, 2158
FriOI	GRGCYC	2 cut(s)	844, 1658
FspBI	CTAG	6 cut(s)	1031, 1044, 1307, 1400, 1563, 1971
GsaI	CCCAGC	2 cut(s)	801, 1082
HaeIII	GGCC	9 cut(s)	5, 14, 23, 536, 596, 1035, 1266, 1574, 1826
HapII	CCGG	2 cut(s)	102, 128
HincII	GTYRAC	2 cut(s)	439, 523
HindII	GTYRAC	2 cut(s)	439, 523
HindIII	AAGCTT	1 cut(s)	1955
HinfI	GANTC	8 cut(s)	392, 402, 499, 623, 1374, 1505, 1532, 2114
HpaI	GTTAAC	1 cut(s)	523
HpaII	CCGG	2 cut(s)	102, 128
HphI	GGTGA	7 cut(s)	356, 482, 508, 845, 1025, 1310, 2195
Hpy166II	GTNNAC	8 cut(s)	439, 523, 692, 1145, 1297, 1378, 1645, 2164
Hpy188I	TCNGA	7 cut(s)	157, 199, 351, 1456, 1467, 1792, 2055
Hpy8I	GTNNAC	8 cut(s)	439, 523, 692, 1145, 1297, 1378, 1645, 2164
HpyAV	CCTTC	7 cut(s)	13, 472, 820, 1271, 1313, 1497, 1524
HpyCH4III	ACNGT	7 cut(s)	300, 434, 445, 860, 922, 1198, 2210
HpyCH4IV	ACGT	1 cut(s)	466
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 20, 653, 952, 1112, 1490, 1499, 1508, 1580
HpyF3I	CTNAG	6 cut(s)	348, 662, 863, 876, 1598, 1748
HpySE526I	ACGT	1 cut(s)	466
KspAI	GTTAAC	1 cut(s)	523
Kzo9I	GATC	4 cut(s)	51, 199, 835, 1808
LguI	GCTCTTC	1 cut(s)	120
LmnI	GCTCC	7 cut(s)	190, 317, 1416, 1489, 1516, 1974, 2060
LweI	GCATC	6 cut(s)	697, 885, 890, 1177, 1599, 1783
MaeI	CTAG	6 cut(s)	1031, 1044, 1307, 1400, 1563, 1971
MaeII	ACGT	1 cut(s)	466
MaeIII	GTNAC	8 cut(s)	496, 1229, 1448, 1519, 1668, 1840, 2038, 2072
MalI	GATC	4 cut(s)	53, 201, 837, 1810
MbiI	CCGCTC	1 cut(s)	1411
MboI	GATC	4 cut(s)	51, 199, 835, 1808
MfeI	CAATTG	2 cut(s)	1061, 1699
MflI	RGATCY	1 cut(s)	51
MhlI	GDGCHC	4 cut(s)	463, 701, 844, 1658
MlsI	TGGCCA	2 cut(s)	596, 1574
MluNI	TGGCCA	2 cut(s)	596, 1574
MlyI	GAGTC	4 cut(s)	493, 1383, 1541, 2123
MmeI	TCCRAC	2 cut(s)	427, 1733
Mox20I	TGGCCA	2 cut(s)	596, 1574
MroXI	GAANNNNTTC	1 cut(s)	1987
MscI	TGGCCA	2 cut(s)	596, 1574
MseI	TTAA	6 cut(s)	522, 789, 1271, 1343, 1965, 2212
MslI	CAYNNNNRTG	3 cut(s)	849, 1609, 1766
Msp20I	TGGCCA	2 cut(s)	596, 1574
MspA1I	CMGCKG	3 cut(s)	370, 1082, 1853
MspI	CCGG	2 cut(s)	102, 128
MspR9I	CCNGG	4 cut(s)	103, 174, 1133, 2176
MunI	CAATTG	2 cut(s)	1061, 1699
Mva1269I	GAATGC	1 cut(s)	1856
MvaI	CCWGG	3 cut(s)	174, 1133, 2176
MwoI	GCNNNNNNNGC	9 cut(s)	11, 20, 653, 952, 1112, 1490, 1499, 1508, 1580
NciI	CCSGG	1 cut(s)	103
NcoI	CCATGG	3 cut(s)	804, 1159, 1416
NdeII	GATC	4 cut(s)	51, 199, 835, 1808
NlaIV	GGNNCC	3 cut(s)	186, 802, 1156
NmeAIII	GCCGAG	2 cut(s)	34, 40
NmuCI	GTSAC	3 cut(s)	496, 1519, 1840
PaqCI	CACCTGC	1 cut(s)	2175
PceI	AGGCCT	1 cut(s)	536
PciSI	GCTCTTC	1 cut(s)	120
PcsI	WCGNNNNNNNCGW	1 cut(s)	1673
PctI	GAATGC	1 cut(s)	1856
PdmI	GAANNNNTTC	1 cut(s)	1987
PfeI	GAWTC	4 cut(s)	392, 402, 623, 1505
Pfl23II	CGTACG	1 cut(s)	40
PflFI	GACNNNGTC	1 cut(s)	1846
PflMI	CCANNNNNTGG	1 cut(s)	1138
PleI	GAGTC	4 cut(s)	493, 1382, 1540, 2122
PmaCI	CACGTG	1 cut(s)	467
PmlI	CACGTG	1 cut(s)	467
PpsI	GAGTC	4 cut(s)	493, 1382, 1540, 2122
Ppu21I	YACGTR	1 cut(s)	467
PshBI	ATTAAT	1 cut(s)	1271
PsiI	TTATAA	2 cut(s)	455, 1724
Psp6I	CCWGG	3 cut(s)	172, 1131, 2174
PspCI	CACGTG	1 cut(s)	467
PspFI	CCCAGC	2 cut(s)	797, 1078
PspGI	CCWGG	3 cut(s)	172, 1131, 2174
PspLI	CGTACG	1 cut(s)	40
PspN4I	GGNNCC	3 cut(s)	186, 802, 1156
PspPI	GGNCC	3 cut(s)	801, 1154, 1824
PstI	CTGCAG	2 cut(s)	814, 1087
PstNI	CAGNNNCTG	3 cut(s)	179, 320, 653
PsuI	RGATCY	1 cut(s)	51
PsyI	GACNNNGTC	1 cut(s)	1846
PvuII	CAGCTG	2 cut(s)	1082, 1853
RsaI	GTAC	7 cut(s)	42, 939, 1127, 1146, 1395, 1695, 2163
RsaNI	GTAC	7 cut(s)	41, 938, 1126, 1145, 1394, 1694, 2162
RseI	CAYNNNNRTG	3 cut(s)	849, 1609, 1766
SapI	GCTCTTC	1 cut(s)	120
SaqAI	TTAA	6 cut(s)	522, 789, 1271, 1343, 1965, 2212
Sau3AI	GATC	4 cut(s)	51, 199, 835, 1808
Sau96I	GGNCC	3 cut(s)	801, 1154, 1824
SchI	GAGTC	4 cut(s)	493, 1383, 1541, 2123
ScrFI	CCNGG	4 cut(s)	103, 174, 1133, 2176
SduI	GDGCHC	4 cut(s)	463, 701, 844, 1658
SfaNI	GCATC	6 cut(s)	697, 885, 890, 1177, 1599, 1783
SfcI	CTRYAG	3 cut(s)	810, 1083, 1896
SfiI	GGCCNNNNNGGCC	2 cut(s)	11, 20
SinI	GGWCC	2 cut(s)	801, 1154
SmiMI	CAYNNNNRTG	3 cut(s)	849, 1609, 1766
SmlI	CTYRAG	2 cut(s)	1001, 1978
SmoI	CTYRAG	2 cut(s)	1001, 1978
SpeI	ACTAGT	1 cut(s)	1399
SseBI	AGGCCT	1 cut(s)	536
SsiI	CCGC	9 cut(s)	6, 96, 99, 212, 368, 645, 955, 1409, 2033
SspMI	CTAG	6 cut(s)	1031, 1044, 1307, 1400, 1563, 1971
StuI	AGGCCT	1 cut(s)	536
StyD4I	CCNGG	4 cut(s)	101, 172, 1131, 2174
StyI	CCWWGG	5 cut(s)	587, 597, 804, 1159, 1416
TaaI	ACNGT	7 cut(s)	300, 434, 445, 860, 922, 1198, 2210
TaiI	ACGT	1 cut(s)	469
TaqI	TCGA	4 cut(s)	283, 395, 405, 1807
TaqII	GACCGA	1 cut(s)	1507
TatI	WGTACW	3 cut(s)	937, 1125, 1393
TauI	GCSGC	3 cut(s)	8, 101, 647
TfiI	GAWTC	4 cut(s)	392, 402, 623, 1505
Tru1I	TTAA	6 cut(s)	522, 789, 1271, 1343, 1965, 2212
Tru9I	TTAA	6 cut(s)	522, 789, 1271, 1343, 1965, 2212
TscAI	CASTG	8 cut(s)	88, 448, 654, 694, 1156, 1528, 1845, 2213
TseFI	GTSAC	3 cut(s)	496, 1519, 1840
Tsp45I	GTSAC	3 cut(s)	496, 1519, 1840
TspDTI	ATGAA	4 cut(s)	1110, 1672, 1849, 2180
TspRI	CASTG	8 cut(s)	88, 448, 654, 694, 1156, 1528, 1845, 2213
Tth111I	GACNNNGTC	1 cut(s)	1846
Van91I	CCANNNNNTGG	1 cut(s)	1138
VpaK11BI	GGWCC	2 cut(s)	801, 1154
VspI	ATTAAT	1 cut(s)	1271
XapI	RAATTY	6 cut(s)	160, 250, 310, 1067, 1203, 1358
XbaI	TCTAGA	1 cut(s)	1306
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1067, 1936
XmiI	GTMKAC	2 cut(s)	1377, 1644
XmnI	GAANNNNTTC	1 cut(s)	1987
XspI	CTAG	6 cut(s)	1031, 1044, 1307, 1400, 1563, 1971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.