Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0006114

Physical Location & Seq

Genomic Coordinates Forward (+)

80700706 .. 80704726

Gene Structure 4021 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G052780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGCCGGCGCCGAGACCGACACCTCCAAGGCCAAACCACGACCCATCGTACGCCTCGGGATCTTCCTCATCTCTCATAGCTTCTTCTTCAGTGTCGTCTTCTCCACTGCCGGCGTTTTGGCTCTTCTGCTGCTTCCGGTTCTCGCCAAGAACACTTACATCTCCGAGAATTCGCTTATGCCAGGCTCTGTGGCTCCCATGCTTTCCGATCAGGAGGTTGCGGAGGCCAATAGATTGATAGACGATTTGACTGCTTTGAATTCCAAGCCTCTTGGTTCAGTAATAGGAAGTCGAAGACTGGTAGCACAGTATATGTCAAATTCGGGCGCTGAAGTTAGTTTTCACAAGTTCCACCCTCAGATAAATCAGTTTCACCCGCTGCACTTCTTTTCTAGCCCTGATTCGAGAAGAATCGAACAGAATGTCAGTTGTGCATTGCACGGTGTTAACACTGTTGGAATTATAAGAGCACCACGTGGTGATGGGAAGGAAGCTATTGTGTTGGTGACTCCTTTCAATTCAGCGAAAGTTAACAAGAATGAGGCCTTATCTTTGGGAATTGCATACTCAGTATTTTCCTTGCTTACCAGAGTTCCCTGGCTGGCCAAGGATGTGATATGGCTCGTTGCAGATTCCCAATTTGGTGAGTATGCCGCAGTTTCTGCTTGGCTAAGAGATTATCACACTCCTTTATTCAGCGGACTGGGCACAATAGATGCAGAAATGTGTCCTGAAAGCAATAATCTGCATGGAATGGAAGAGAACCATTTTACAGAAAGGATGACTTATGATGGATTTAAACGGGCTGGGACCATGGCTGCAGCCCTTGTTGTGAAGGTTGGTGATCGGGCTCATCAATATGAGGACAGTCTGAGTATCTATGCTGAGGCATCCAATGGGCAGATGCCAAATCTTGACCTCATCAATACTGTGAATTATTTAGCAGTACATAGGCAAGGTTTGCGGGTAAAGGTGGAGAAATTGAGGTCTTTCCTTGATATGGGATGGCTTGAGACTTTGGGTGAAATGTTTGAATTACTAGGCCATTATGCTAGAAGCATAAATCCCCAATTGAAATTTGGTATCCCAGCTGCAGAGTATATTGAGGGCAGTGCCACACTTGCAAGTTCATTGTACTACCAGGCTTTGGGTGTACCCACTGGTCCCCATGGTGCTTTTCGTGATTACCAAGTTGATGCAATTACTGTGGAAATTTTGCCTAAAGTTTATACTTTGGGTAACAAAAGACAAAATGACTTCCTTCTGCGAAGTGGCCGATTAATTGAAGGAGTTGTGCAATCTGTAAACAACCTTCTAGAAAAGTTTCACCAGTCATTTTTTCTATACCTATTAACATCTCCCAGTAAATTTGTGTCGGTGGGAGTCTACATGATTGCTTTTGCACTACTAGTTGCACCGCTCCCCATGGTGGCTGCCTCTCTCTTTGTAAATGCCAGTAACTCTGATGATAGTCTGAATACAGAGAAACCTGCTCCTTCAGCCACTGCTGCTGACTCTGCTCCTTTGGTCACTGCTTATGAGTCTTCTCCTTTACTCAGTGCTGCTAATTCTAGTTCTTTGGCCACTACTGCTGGTTGCATCACTCTCAGCTCATGGAAATGGCTTTATGCAGCAAAGAAATCTTTTGTTGTCTACTTGTGGGGCTCTGTTGTTTCGTTACTCCCGTATTTCATCTGTCAAATACCCAATTGCACTCCAACAACCAGCTTTATAATCTGGGTTTTGCTTTCAATACTCAGCCTTGTGGTCATGTATATGATTTTGGCTTCTCCATTTTCCGATGCTAATAACTCTCGATCACAAAAAGAGTGGGCCATCCTAAAATCAGTGACTATGTCAGCTGCATTCATTGGTTTGTGTCTCATGTCAATCATCAACTTCGCTACAGCAGAAATTGGGGGCTTACTGATTGTCCCCATGTGTTTGATGGCTTATCCTTTGAAGCTTGATGTTAAAACTAGGAGCTTGAGAACAATTTCAAGAGCAGCTTGTAATCTCATTCTGGGGATTGTAGGATTTCCACCCGTTACTTTTATAGTTCTGAAAGGAGCATTCGAGGGTTACAGCAGCATTAGTGTCGGTGACTTCTGGTCTTGGGTGGAGTCTCTGTGGGTTTGGAATAGTGCCACTTACCTATATATTGGTGTGGTACACCTGCCATCCTGGGTTTTGTGTATTCATATATTGTTTCACCACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003923 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016255 GO:0016787 GO:0019538 GO:0019637 GO:0030176 GO:0031224 GO:0031226 GO:0031227 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0042765 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0071704 GO:0071944 GO:0090407 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Gaa1

Protein Analysis

740

Amino Acids

81.12

Weight (kDa)

6.81

Isoelectric Point (pI)

42.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gaa1	PF04114	147 - 732	9.6e-99	Gaa1-like, GPI transamidase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19130 AT5G19130
fragaria_vesca	FvH4_6g51172 FvH4_6g51190 FvH4_6g51190 FvH4_6g51190
malus_domestica	MD09G1027000.v1.1 MD17G1027000.v1.1
prunus_persica	Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1 Prupe.3G291700_v2.0.a1
pyrus_communis	pycom111g02110 pycom17g02210
rosa_chinensis	RchiOBHm_Chr2g0172791
rosa_laevigata	RLG00000022137
rosa_multiflora	Rmu_sc0002979.1_g000012 Rmu_sc0010744.1_g000001 Rmu_sc0027475.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079510
rosa_rugosa	Rorug02G0561700
rosa_samantha	Rh2AG639400 Rh2BG652800 Rh2CG618600 Rh2DG666500
rosa_wichuraiana	Rw2G052780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	464, 1733
AarI	CACCTGC	1 cut(s)	2184
Acc36I	ACCTGC	2 cut(s)	1498, 2184
AccB1I	GGYRCC	1 cut(s)	8
AccB7I	CCANNNNNTGG	1 cut(s)	1147
AccBSI	CCGCTC	1 cut(s)	1420
AccI	GTMKAC	2 cut(s)	1386, 1653
AciI	CCGC	6 cut(s)	221, 377, 654, 699, 964, 1418
AclWI	GGATC	1 cut(s)	68
AcoI	YGGCCR	4 cut(s)	3, 603, 1273, 1581
AcsI	RAATTY	6 cut(s)	169, 259, 319, 1076, 1212, 1367
AcuI	CTGAAG	3 cut(s)	73, 351, 1482
AcvI	CACGTG	1 cut(s)	476
AcyI	GRCGYC	1 cut(s)	9
AdeI	CACNNNGTG	2 cut(s)	476, 479
AfaI	GTAC	5 cut(s)	51, 948, 1136, 1155, 2172
AfiI	CCNNNNNNNGG	3 cut(s)	1000, 1147, 1429
AgsI	TTSAA	8 cut(s)	259, 517, 1034, 1075, 1286, 1752, 1963, 2001
AhdI	GACNNNNNGTC	1 cut(s)	2110
AhlI	ACTAGT	1 cut(s)	1408
AjnI	CCWGG	4 cut(s)	181, 596, 1140, 2183
AluBI	AGCT	9 cut(s)	81, 494, 1091, 1611, 1728, 1862, 1966, 1986, 2009
AluI	AGCT	9 cut(s)	81, 494, 1091, 1611, 1728, 1862, 1966, 1986, 2009
Alw21I	GWGCWC	1 cut(s)	472
Alw26I	GTCTC	4 cut(s)	8, 1007, 1886, 2130
AlwI	GGATC	1 cut(s)	68
AlwNI	CAGNNNCTG	3 cut(s)	188, 662, 1505
Ama87I	CYCGRG	1 cut(s)	56
AoxI	GGCC	9 cut(s)	3, 30, 225, 543, 603, 1042, 1273, 1581, 1833
ApoI	RAATTY	6 cut(s)	169, 259, 319, 1076, 1212, 1367
ArsI	GACNNNNNNTTYG	2 cut(s)	408, 440
AseI	ATTAAT	1 cut(s)	1280
Asp700I	GAANNNNTTC	2 cut(s)	1323, 1996
AspLEI	GCGC	2 cut(s)	11, 329
AspS9I	GGNCC	3 cut(s)	810, 1163, 1833
AsuHPI	GGTGA	9 cut(s)	365, 491, 517, 656, 854, 1034, 1319, 2114, 2204
AvaI	CYCGRG	1 cut(s)	56
AvaII	GGWCC	2 cut(s)	810, 1163
BaeGI	GKGCMC	1 cut(s)	710
BalI	TGGCCA	2 cut(s)	605, 1583
BanI	GGYRCC	1 cut(s)	8
BanII	GRGCYC	2 cut(s)	853, 1667
BarI	GAAGNNNNNNTAC	2 cut(s)	1296, 1328
BbrPI	CACGTG	1 cut(s)	476
BbsI	GAAGAC	3 cut(s)	91, 301, 1536
Bbv12I	GWGCWC	1 cut(s)	472
BbvCI	CCTCAGC	1 cut(s)	885
BccI	CCATC	7 cut(s)	53, 476, 785, 999, 1844, 1942, 2188
BcgI	CGANNNNNNTGC	4 cut(s)	233, 267, 2080, 2114
BciT130I	CCWGG	4 cut(s)	183, 598, 1142, 2185
BciVI	GTATCC	1 cut(s)	1094
BcoDI	GTCTC	4 cut(s)	8, 1007, 1886, 2130
BcuI	ACTAGT	1 cut(s)	1408
BfaI	CTAG	7 cut(s)	393, 1040, 1053, 1316, 1409, 1572, 1980
BfmI	CTRYAG	3 cut(s)	819, 1092, 1905
BfoI	RGCGCY	2 cut(s)	12, 330
BfuAI	ACCTGC	2 cut(s)	1498, 2184
BfuI	GTATCC	1 cut(s)	1094
Bme1390I	CCNGG	4 cut(s)	183, 598, 1142, 2185
Bme18I	GGWCC	2 cut(s)	810, 1163
BmeRI	GACNNNNNGTC	1 cut(s)	2110
BmeT110I	CYCGRG	1 cut(s)	56
BmgT120I	GGNCC	3 cut(s)	810, 1163, 1833
BmiI	GGNNCC	4 cut(s)	10, 195, 811, 1165
BmrFI	CCNGG	4 cut(s)	183, 598, 1142, 2185
BmrI	ACTGGG	2 cut(s)	713, 1356
BmsI	GCATC	6 cut(s)	706, 894, 899, 1186, 1608, 1792
BmuI	ACTGGG	2 cut(s)	713, 1356
BpiI	GAAGAC	3 cut(s)	91, 301, 1536
Bpu10I	CCTNAGC	1 cut(s)	885
BpuEI	CTTGAG	2 cut(s)	1031, 2008
BsaAI	YACGTR	1 cut(s)	476
BsaHI	GRCGYC	1 cut(s)	9
BsaI	GGTCTC	1 cut(s)	8
BsaJI	CCNNGG	8 cut(s)	27, 55, 596, 606, 813, 1168, 1425, 2184
BsaWI	WCCGGW	1 cut(s)	136
BsaXI	ACNNNNNCTCC	2 cut(s)	2114, 2144
Bsc4I	CCNNNNNNNGG	3 cut(s)	1000, 1147, 1429
Bse118I	RCCGGY	2 cut(s)	5, 110
Bse1I	ACTGG	6 cut(s)	303, 708, 1165, 1330, 1362, 1455
Bse3DI	GCAATG	1 cut(s)	434
BseBI	CCWGG	4 cut(s)	183, 598, 1142, 2185
BseDI	CCNNGG	8 cut(s)	27, 55, 596, 606, 813, 1168, 1425, 2184
BseGI	GGATG	6 cut(s)	616, 786, 890, 1010, 1836, 2180
BseLI	CCNNNNNNNGG	3 cut(s)	1000, 1147, 1429
BseMI	GCAATG	1 cut(s)	434
BseMII	CTCAG	7 cut(s)	371, 582, 863, 876, 1570, 1621, 1771
BseNI	ACTGG	6 cut(s)	303, 708, 1165, 1330, 1362, 1455
BseSI	GKGCMC	1 cut(s)	710
BseYI	CCCAGC	2 cut(s)	806, 1087
BsgI	GTGCAG	1 cut(s)	365
BshFI	GGCC	9 cut(s)	5, 32, 227, 545, 605, 1044, 1275, 1583, 1835
BshNI	GGYRCC	1 cut(s)	8
BsiHKAI	GWGCWC	1 cut(s)	472
BsiHKCI	CYCGRG	1 cut(s)	56
BsiSI	CCGG	3 cut(s)	6, 111, 137
BsiWI	CGTACG	1 cut(s)	49
BslFI	GGGAC	3 cut(s)	823, 1149, 1919
BslI	CCNNNNNNNGG	3 cut(s)	1000, 1147, 1429
BsmAI	GTCTC	4 cut(s)	8, 1007, 1886, 2130
BsmFI	GGGAC	3 cut(s)	823, 1149, 1919
BsmI	GAATGC	2 cut(s)	1865, 2072
BsnI	GGCC	9 cut(s)	5, 32, 227, 545, 605, 1044, 1275, 1583, 1835
Bso31I	GGTCTC	1 cut(s)	8
BsoBI	CYCGRG	1 cut(s)	56
Bsp1286I	GDGCHC	4 cut(s)	472, 710, 853, 1667
Bsp143I	GATC	4 cut(s)	60, 208, 844, 1817
Bsp19I	CCATGG	3 cut(s)	813, 1168, 1425
BspACI	CCGC	6 cut(s)	221, 377, 654, 699, 964, 1418
BspANI	GGCC	9 cut(s)	5, 32, 227, 545, 605, 1044, 1275, 1583, 1835
BspCNI	CTCAG	7 cut(s)	370, 581, 864, 877, 1569, 1620, 1770
BspLI	GGNNCC	4 cut(s)	10, 195, 811, 1165
BspMAI	CTGCAG	2 cut(s)	823, 1096
BspMI	ACCTGC	2 cut(s)	1498, 2184
BspPI	GGATC	1 cut(s)	68
BspQI	GCTCTTC	1 cut(s)	129
BspT107I	GGYRCC	1 cut(s)	8
BspTNI	GGTCTC	1 cut(s)	8
BsrBI	CCGCTC	1 cut(s)	1420
BsrDI	GCAATG	1 cut(s)	434
BsrFI	RCCGGY	2 cut(s)	5, 110
BsrI	ACTGG	6 cut(s)	303, 708, 1165, 1330, 1362, 1455
BssAI	RCCGGY	2 cut(s)	5, 110
BssECI	CCNNGG	8 cut(s)	27, 55, 596, 606, 813, 1168, 1425, 2184
BssMI	GATC	4 cut(s)	60, 208, 844, 1817
BssNI	GRCGYC	1 cut(s)	9
BssT1I	CCWWGG	5 cut(s)	27, 606, 813, 1168, 1425
Bst2UI	CCWGG	4 cut(s)	183, 598, 1142, 2185
Bst4CI	ACNGT	7 cut(s)	309, 443, 454, 869, 931, 1207, 2219
Bst6I	CTCTTC	2 cut(s)	129, 753
BstACI	GRCGYC	1 cut(s)	9
BstAPI	GCANNNNNTGC	2 cut(s)	662, 961
BstBAI	YACGTR	1 cut(s)	476
BstC8I	GCNNGC	3 cut(s)	7, 112, 603
BstDEI	CTNAG	8 cut(s)	357, 568, 671, 872, 885, 1556, 1607, 1757
BstDSI	CCRYGG	3 cut(s)	813, 1168, 1425
BstF5I	GGATG	6 cut(s)	616, 786, 890, 1010, 1836, 2180
BstH2I	RGCGCY	2 cut(s)	12, 330
BstHHI	GCGC	2 cut(s)	11, 329
BstKTI	GATC	4 cut(s)	63, 211, 847, 1820
BstMAI	GTCTC	4 cut(s)	8, 1007, 1886, 2130
BstMBI	GATC	4 cut(s)	60, 208, 844, 1817
BstMWI	GCNNNNNNNGC	8 cut(s)	662, 705, 961, 1121, 1499, 1508, 1517, 1589
BstNI	CCWGG	4 cut(s)	183, 598, 1142, 2185
BstSCI	CCNGG	4 cut(s)	181, 596, 1140, 2183
BstSFI	CTRYAG	3 cut(s)	819, 1092, 1905
BstSLI	GKGCMC	1 cut(s)	710
BstV2I	GAAGAC	3 cut(s)	91, 301, 1536
BstX2I	RGATCY	1 cut(s)	60
BstYI	RGATCY	1 cut(s)	60
BsuI	GTATCC	1 cut(s)	1094
BsuRI	GGCC	9 cut(s)	5, 32, 227, 545, 605, 1044, 1275, 1583, 1835
BtgI	CCRYGG	3 cut(s)	813, 1168, 1425
BtsCI	GGATG	6 cut(s)	616, 786, 890, 1010, 1836, 2180
BtsI	GCAGTG	4 cut(s)	105, 1117, 1503, 1530
BveI	ACCTGC	2 cut(s)	1498, 2184
Cac8I	GCNNGC	3 cut(s)	7, 112, 603
CaiI	CAGNNNCTG	3 cut(s)	188, 662, 1505
CfoI	GCGC	2 cut(s)	11, 329
Cfr10I	RCCGGY	2 cut(s)	5, 110
Cfr13I	GGNCC	3 cut(s)	810, 1163, 1833
Csp6I	GTAC	5 cut(s)	50, 947, 1135, 1154, 2171
CspCI	CAANNNNNGTGG	4 cut(s)	1188, 1223, 1811, 1846
CviQI	GTAC	5 cut(s)	50, 947, 1135, 1154, 2171
DdeI	CTNAG	8 cut(s)	357, 568, 671, 872, 885, 1556, 1607, 1757
DinI	GGCGCC	1 cut(s)	10
DpnI	GATC	4 cut(s)	62, 210, 846, 1819
DpnII	GATC	4 cut(s)	60, 208, 844, 1817
DraI	TTTAAA	1 cut(s)	799
DraIII	CACNNNGTG	2 cut(s)	476, 479
DriI	GACNNNNNGTC	1 cut(s)	2110
EaeI	YGGCCR	4 cut(s)	3, 603, 1273, 1581
Eam1104I	CTCTTC	2 cut(s)	129, 753
Eam1105I	GACNNNNNGTC	1 cut(s)	2110
EarI	CTCTTC	2 cut(s)	129, 753
Eco130I	CCWWGG	5 cut(s)	27, 606, 813, 1168, 1425
Eco147I	AGGCCT	1 cut(s)	545
Eco24I	GRGCYC	2 cut(s)	853, 1667
Eco31I	GGTCTC	1 cut(s)	8
Eco47I	GGWCC	2 cut(s)	810, 1163
Eco57I	CTGAAG	3 cut(s)	73, 351, 1482
Eco72I	CACGTG	1 cut(s)	476
Eco88I	CYCGRG	1 cut(s)	56
EcoRI	GAATTC	2 cut(s)	169, 259
EcoRII	CCWGG	4 cut(s)	181, 596, 1140, 2183
EcoT14I	CCWWGG	5 cut(s)	27, 606, 813, 1168, 1425
EcoT38I	GRGCYC	2 cut(s)	853, 1667
EgeI	GGCGCC	1 cut(s)	10
EheI	GGCGCC	1 cut(s)	10
ErhI	CCWWGG	5 cut(s)	27, 606, 813, 1168, 1425
FalI	AAGNNNNNCTT	4 cut(s)	769, 801, 1993, 2025
FaqI	GGGAC	3 cut(s)	823, 1149, 1919
FauI	CCCGC	2 cut(s)	384, 957
FblI	GTMKAC	2 cut(s)	1386, 1653
FokI	GGATG	6 cut(s)	623, 793, 877, 1017, 1823, 2167
FriOI	GRGCYC	2 cut(s)	853, 1667
FspBI	CTAG	7 cut(s)	393, 1040, 1053, 1316, 1409, 1572, 1980
GlaI	GCGC	2 cut(s)	10, 328
GsaI	CCCAGC	2 cut(s)	810, 1091
HaeII	RGCGCY	2 cut(s)	12, 330
HaeIII	GGCC	9 cut(s)	5, 32, 227, 545, 605, 1044, 1275, 1583, 1835
HapII	CCGG	3 cut(s)	6, 111, 137
HhaI	GCGC	2 cut(s)	11, 329
Hin1I	GRCGYC	1 cut(s)	9
Hin6I	GCGC	2 cut(s)	9, 327
HinP1I	GCGC	2 cut(s)	9, 327
HincII	GTYRAC	2 cut(s)	448, 532
HindII	GTYRAC	2 cut(s)	448, 532
HindIII	AAGCTT	1 cut(s)	1964
HinfI	GANTC	8 cut(s)	401, 411, 508, 632, 1383, 1514, 1541, 2123
HpaI	GTTAAC	2 cut(s)	448, 532
HpaII	CCGG	3 cut(s)	6, 111, 137
HphI	GGTGA	9 cut(s)	365, 491, 517, 656, 854, 1034, 1319, 2114, 2204
Hpy166II	GTNNAC	7 cut(s)	448, 532, 1154, 1306, 1387, 1654, 2173
Hpy188I	TCNGA	8 cut(s)	166, 208, 360, 873, 1465, 1476, 1801, 2064
Hpy188III	TCNNGA	9 cut(s)	58, 212, 405, 731, 914, 1181, 1316, 1815, 2001
Hpy8I	GTNNAC	7 cut(s)	448, 532, 1154, 1306, 1387, 1654, 2173
HpyAV	CCTTC	6 cut(s)	481, 829, 1271, 1280, 1322, 1506
HpyCH4III	ACNGT	7 cut(s)	309, 443, 454, 869, 931, 1207, 2219
HpyCH4IV	ACGT	1 cut(s)	475
HpyF10VI	GCNNNNNNNGC	8 cut(s)	662, 705, 961, 1121, 1499, 1508, 1517, 1589
HpyF3I	CTNAG	8 cut(s)	357, 568, 671, 872, 885, 1556, 1607, 1757
HpySE526I	ACGT	1 cut(s)	475
Hsp92I	GRCGYC	1 cut(s)	9
HspAI	GCGC	2 cut(s)	9, 327
KasI	GGCGCC	1 cut(s)	8
KroI	GCCGGC	2 cut(s)	5, 110
KroNI	GCCGGC	2 cut(s)	7, 112
KspAI	GTTAAC	2 cut(s)	448, 532
Kzo9I	GATC	4 cut(s)	60, 208, 844, 1817
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	6 cut(s)	199, 1425, 1498, 1525, 1983, 2069
LweI	GCATC	6 cut(s)	706, 894, 899, 1186, 1608, 1792
MaeI	CTAG	7 cut(s)	393, 1040, 1053, 1316, 1409, 1572, 1980
MaeII	ACGT	1 cut(s)	475
MaeIII	GTNAC	9 cut(s)	505, 1238, 1457, 1528, 1677, 1849, 2047, 2081, 2102
MalI	GATC	4 cut(s)	62, 210, 846, 1819
MbiI	CCGCTC	1 cut(s)	1420
MboI	GATC	4 cut(s)	60, 208, 844, 1817
MboII	GAAGA	9 cut(s)	55, 76, 79, 91, 116, 306, 420, 770, 1536
MfeI	CAATTG	2 cut(s)	1070, 1708
MflI	RGATCY	1 cut(s)	60
MhlI	GDGCHC	4 cut(s)	472, 710, 853, 1667
MlsI	TGGCCA	2 cut(s)	605, 1583
MluNI	TGGCCA	2 cut(s)	605, 1583
Mly113I	GGCGCC	1 cut(s)	9
MlyI	GAGTC	5 cut(s)	502, 1392, 1508, 1550, 2132
MmeI	TCCRAC	2 cut(s)	436, 1742
Mox20I	TGGCCA	2 cut(s)	605, 1583
MroNI	GCCGGC	2 cut(s)	5, 110
MroXI	GAANNNNTTC	2 cut(s)	1323, 1996
MscI	TGGCCA	2 cut(s)	605, 1583
MseI	TTAA	7 cut(s)	447, 531, 798, 1280, 1352, 1974, 2221
MslI	CAYNNNNRTG	3 cut(s)	858, 1618, 1775
Msp20I	TGGCCA	2 cut(s)	605, 1583
MspA1I	CMGCKG	4 cut(s)	379, 699, 1091, 1862
MspI	CCGG	3 cut(s)	6, 111, 137
MspR9I	CCNGG	4 cut(s)	183, 598, 1142, 2185
MunI	CAATTG	2 cut(s)	1070, 1708
Mva1269I	GAATGC	2 cut(s)	1865, 2072
MvaI	CCWGG	4 cut(s)	183, 598, 1142, 2185
MwoI	GCNNNNNNNGC	8 cut(s)	662, 705, 961, 1121, 1499, 1508, 1517, 1589
NaeI	GCCGGC	2 cut(s)	7, 112
NarI	GGCGCC	1 cut(s)	9
NcoI	CCATGG	3 cut(s)	813, 1168, 1425
NdeII	GATC	4 cut(s)	60, 208, 844, 1817
NgoMIV	GCCGGC	2 cut(s)	5, 110
NlaIV	GGNNCC	4 cut(s)	10, 195, 811, 1165
NmeAIII	GCCGAG	1 cut(s)	37
NmuCI	GTSAC	4 cut(s)	505, 1528, 1849, 2102
PaqCI	CACCTGC	1 cut(s)	2184
PceI	AGGCCT	1 cut(s)	545
PciSI	GCTCTTC	1 cut(s)	129
PcsI	WCGNNNNNNNCGW	1 cut(s)	1682
PctI	GAATGC	2 cut(s)	1865, 2072
PdiI	GCCGGC	2 cut(s)	7, 112
PdmI	GAANNNNTTC	2 cut(s)	1323, 1996
PfeI	GAWTC	3 cut(s)	401, 411, 632
Pfl23II	CGTACG	1 cut(s)	49
PflFI	GACNNNGTC	1 cut(s)	1855
PflMI	CCANNNNNTGG	1 cut(s)	1147
PleI	GAGTC	5 cut(s)	502, 1391, 1508, 1549, 2131
PluTI	GGCGCC	1 cut(s)	12
PmaCI	CACGTG	1 cut(s)	476
PmlI	CACGTG	1 cut(s)	476
PpsI	GAGTC	5 cut(s)	502, 1391, 1508, 1549, 2131
Ppu21I	YACGTR	1 cut(s)	476
PshBI	ATTAAT	1 cut(s)	1280
PsiI	TTATAA	2 cut(s)	464, 1733
Psp6I	CCWGG	4 cut(s)	181, 596, 1140, 2183
PspCI	CACGTG	1 cut(s)	476
PspFI	CCCAGC	2 cut(s)	806, 1087
PspGI	CCWGG	4 cut(s)	181, 596, 1140, 2183
PspLI	CGTACG	1 cut(s)	49
PspN4I	GGNNCC	4 cut(s)	10, 195, 811, 1165
PspPI	GGNCC	3 cut(s)	810, 1163, 1833
PstI	CTGCAG	2 cut(s)	823, 1096
PstNI	CAGNNNCTG	3 cut(s)	188, 662, 1505
PsuI	RGATCY	1 cut(s)	60
PsyI	GACNNNGTC	1 cut(s)	1855
PvuII	CAGCTG	2 cut(s)	1091, 1862
RsaI	GTAC	5 cut(s)	51, 948, 1136, 1155, 2172
RsaNI	GTAC	5 cut(s)	50, 947, 1135, 1154, 2171
RseI	CAYNNNNRTG	3 cut(s)	858, 1618, 1775
SapI	GCTCTTC	1 cut(s)	129
SaqAI	TTAA	7 cut(s)	447, 531, 798, 1280, 1352, 1974, 2221
Sau3AI	GATC	4 cut(s)	60, 208, 844, 1817
Sau96I	GGNCC	3 cut(s)	810, 1163, 1833
SchI	GAGTC	5 cut(s)	502, 1392, 1508, 1550, 2132
ScrFI	CCNGG	4 cut(s)	183, 598, 1142, 2185
SduI	GDGCHC	4 cut(s)	472, 710, 853, 1667
SfaNI	GCATC	6 cut(s)	706, 894, 899, 1186, 1608, 1792
SfcI	CTRYAG	3 cut(s)	819, 1092, 1905
SfoI	GGCGCC	1 cut(s)	10
SinI	GGWCC	2 cut(s)	810, 1163
SmiMI	CAYNNNNRTG	3 cut(s)	858, 1618, 1775
SmlI	CTYRAG	2 cut(s)	1010, 1987
SmoI	CTYRAG	2 cut(s)	1010, 1987
SpeI	ACTAGT	1 cut(s)	1408
SseBI	AGGCCT	1 cut(s)	545
SsiI	CCGC	6 cut(s)	221, 377, 654, 699, 964, 1418
SspDI	GGCGCC	1 cut(s)	8
SspMI	CTAG	7 cut(s)	393, 1040, 1053, 1316, 1409, 1572, 1980
StuI	AGGCCT	1 cut(s)	545
StyD4I	CCNGG	4 cut(s)	181, 596, 1140, 2183
StyI	CCWWGG	5 cut(s)	27, 606, 813, 1168, 1425
TaaI	ACNGT	7 cut(s)	309, 443, 454, 869, 931, 1207, 2219
TaiI	ACGT	1 cut(s)	478
TaqI	TCGA	5 cut(s)	292, 404, 414, 1816, 2076
TaqII	GACCGA	1 cut(s)	32
TatI	WGTACW	2 cut(s)	946, 1134
TauI	GCSGC	1 cut(s)	656
TfiI	GAWTC	3 cut(s)	401, 411, 632
Tru1I	TTAA	7 cut(s)	447, 531, 798, 1280, 1352, 1974, 2221
Tru9I	TTAA	7 cut(s)	447, 531, 798, 1280, 1352, 1974, 2221
TseFI	GTSAC	4 cut(s)	505, 1528, 1849, 2102
Tsp45I	GTSAC	4 cut(s)	505, 1528, 1849, 2102
TspDTI	ATGAA	4 cut(s)	1119, 1681, 1858, 2189
Tth111I	GACNNNGTC	1 cut(s)	1855
Van91I	CCANNNNNTGG	1 cut(s)	1147
VpaK11BI	GGWCC	2 cut(s)	810, 1163
VspI	ATTAAT	1 cut(s)	1280
XapI	RAATTY	6 cut(s)	169, 259, 319, 1076, 1212, 1367
XbaI	TCTAGA	1 cut(s)	1315
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1076, 1945
XmiI	GTMKAC	2 cut(s)	1386, 1653
XmnI	GAANNNNTTC	2 cut(s)	1323, 1996
XspI	CTAG	7 cut(s)	393, 1040, 1053, 1316, 1409, 1572, 1980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.