Fringe-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05280 AT1G05280 |
| fragaria_vesca | FvH4_6g43600 |
| malus_domestica | MD09G1104300.v1.1 MD17G1092000.v1.1 |
| prunus_persica | Prupe.3G221300_v2.0.a1 |
| pyrus_communis | pycom09g02750 pycom17g08910 |
| rosa_chinensis | RchiOBHm_Chr2g0160191 |
| rosa_laevigata | RLG00000021203 |
| rosa_multiflora | Rmu_sc0000403.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00089970 |
| rosa_rugosa | Rorug02G0482300 |
| rosa_samantha | Rh2AG547700 Rh2BG560900 Rh2CG531500 Rh2DG569600 |
| rosa_wichuraiana | Rw2G045290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1059 |
| Acc36I | ACCTGC | 1 cut(s) | 623 |
| AccB1I | GGYRCC | 1 cut(s) | 1321 |
| AccI | GTMKAC | 1 cut(s) | 1029 |
| AccII | CGCG | 2 cut(s) | 432, 1327 |
| AciI | CCGC | 5 cut(s) | 173, 311, 402, 1199, 1325 |
| AclWI | GGATC | 2 cut(s) | 1142, 1155 |
| AcsI | RAATTY | 1 cut(s) | 517 |
| AcyI | GRCGYC | 3 cut(s) | 839, 1056, 1322 |
| AdeI | CACNNNGTG | 1 cut(s) | 199 |
| AfaI | GTAC | 4 cut(s) | 255, 560, 666, 1289 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1358 |
| AflIII | ACRYGT | 1 cut(s) | 430 |
| AgsI | TTSAA | 1 cut(s) | 1025 |
| AjiI | CACGTC | 1 cut(s) | 331 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 741, 773 |
| AluBI | AGCT | 5 cut(s) | 126, 133, 929, 1270, 1300 |
| AluI | AGCT | 5 cut(s) | 126, 133, 929, 1270, 1300 |
| Alw21I | GWGCWC | 2 cut(s) | 128, 195 |
| Alw26I | GTCTC | 5 cut(s) | 48, 73, 159, 410, 437 |
| AlwI | GGATC | 2 cut(s) | 1142, 1155 |
| Ama87I | CYCGRG | 1 cut(s) | 364 |
| AoxI | GGCC | 2 cut(s) | 814, 1160 |
| ApeKI | GCWGC | 4 cut(s) | 4, 929, 1069, 1362 |
| ApoI | RAATTY | 1 cut(s) | 517 |
| AspLEI | GCGC | 2 cut(s) | 454, 1324 |
| AspS9I | GGNCC | 1 cut(s) | 1303 |
| AsuHPI | GGTGA | 3 cut(s) | 380, 535, 847 |
| AsuII | TTCGAA | 2 cut(s) | 26, 215 |
| AvaI | CYCGRG | 1 cut(s) | 364 |
| AvaII | GGWCC | 1 cut(s) | 1303 |
| BaeGI | GKGCMC | 1 cut(s) | 652 |
| BamHI | GGATCC | 1 cut(s) | 1147 |
| BanI | GGYRCC | 1 cut(s) | 1321 |
| BanII | GRGCYC | 1 cut(s) | 128 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1395, 1427 |
| BbsI | GAAGAC | 3 cut(s) | 533, 874, 1182 |
| Bbv12I | GWGCWC | 2 cut(s) | 128, 195 |
| BbvI | GCAGC | 3 cut(s) | 916, 1081, 1374 |
| BccI | CCATC | 4 cut(s) | 792, 975, 1196, 1366 |
| BceAI | ACGGC | 2 cut(s) | 272, 817 |
| BciVI | GTATCC | 1 cut(s) | 859 |
| BclI | TGATCA | 2 cut(s) | 316, 544 |
| BcoDI | GTCTC | 5 cut(s) | 48, 73, 159, 410, 437 |
| BfaI | CTAG | 1 cut(s) | 726 |
| BfoI | RGCGCY | 2 cut(s) | 455, 1325 |
| BfuAI | ACCTGC | 1 cut(s) | 623 |
| BfuI | GTATCC | 1 cut(s) | 859 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 656, 1330 |
| BisI | GCNGC | 5 cut(s) | 5, 930, 1070, 1325, 1363 |
| BlsI | GCNGC | 5 cut(s) | 6, 931, 1071, 1326, 1364 |
| BmcAI | AGTACT | 1 cut(s) | 666 |
| Bme18I | GGWCC | 1 cut(s) | 1303 |
| BmeT110I | CYCGRG | 1 cut(s) | 364 |
| BmgBI | CACGTC | 1 cut(s) | 331 |
| BmgT120I | GGNCC | 1 cut(s) | 1303 |
| BmiI | GGNNCC | 3 cut(s) | 272, 1149, 1323 |
| BmsI | GCATC | 4 cut(s) | 151, 369, 838, 865 |
| BpiI | GAAGAC | 3 cut(s) | 533, 874, 1182 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 390, 422 |
| BpmI | CTGGAG | 1 cut(s) | 1292 |
| Bpu14I | TTCGAA | 2 cut(s) | 26, 215 |
| BpuEI | CTTGAG | 3 cut(s) | 141, 209, 392 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1376 |
| BsaHI | GRCGYC | 3 cut(s) | 839, 1056, 1322 |
| BsaI | GGTCTC | 2 cut(s) | 410, 437 |
| BsaJI | CCNNGG | 2 cut(s) | 447, 1262 |
| BsaWI | WCCGGW | 1 cut(s) | 832 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1358 |
| Bse118I | RCCGGY | 2 cut(s) | 776, 1162 |
| Bse1I | ACTGG | 4 cut(s) | 274, 672, 825, 1084 |
| Bse3DI | GCAATG | 1 cut(s) | 1340 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1376 |
| BseDI | CCNNGG | 2 cut(s) | 447, 1262 |
| BseGI | GGATG | 4 cut(s) | 293, 829, 1207, 1420 |
| BseJI | GATNNNNATC | 1 cut(s) | 1376 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1358 |
| BseMI | GCAATG | 1 cut(s) | 1340 |
| BseMII | CTCAG | 3 cut(s) | 29, 432, 504 |
| BseNI | ACTGG | 4 cut(s) | 274, 672, 825, 1084 |
| BseRI | GAGGAG | 1 cut(s) | 1289 |
| BseSI | GKGCMC | 1 cut(s) | 652 |
| BseXI | GCAGC | 3 cut(s) | 916, 1081, 1374 |
| BsgI | GTGCAG | 2 cut(s) | 651, 1088 |
| Bsh1236I | CGCG | 2 cut(s) | 432, 1327 |
| BshFI | GGCC | 2 cut(s) | 816, 1162 |
| BshNI | GGYRCC | 1 cut(s) | 1321 |
| BsiHKAI | GWGCWC | 2 cut(s) | 128, 195 |
| BsiHKCI | CYCGRG | 1 cut(s) | 364 |
| BsiSI | CCGG | 4 cut(s) | 777, 833, 1052, 1163 |
| BslFI | GGGAC | 1 cut(s) | 583 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1358 |
| BsmAI | GTCTC | 5 cut(s) | 48, 73, 159, 410, 437 |
| BsmBI | CGTCTC | 1 cut(s) | 48 |
| BsmFI | GGGAC | 1 cut(s) | 583 |
| BsmI | GAATGC | 1 cut(s) | 1397 |
| BsnI | GGCC | 2 cut(s) | 816, 1162 |
| Bso31I | GGTCTC | 2 cut(s) | 410, 437 |
| BsoBI | CYCGRG | 1 cut(s) | 364 |
| Bsp119I | TTCGAA | 2 cut(s) | 26, 215 |
| Bsp1286I | GDGCHC | 3 cut(s) | 128, 195, 652 |
| Bsp143I | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| BspACI | CCGC | 5 cut(s) | 173, 311, 402, 1199, 1325 |
| BspANI | GGCC | 2 cut(s) | 816, 1162 |
| BspCNI | CTCAG | 3 cut(s) | 28, 433, 505 |
| BspFNI | CGCG | 2 cut(s) | 432, 1327 |
| BspLI | GGNNCC | 3 cut(s) | 272, 1149, 1323 |
| BspMI | ACCTGC | 1 cut(s) | 623 |
| BspPI | GGATC | 2 cut(s) | 1142, 1155 |
| BspQI | GCTCTTC | 2 cut(s) | 95, 113 |
| BspT104I | TTCGAA | 2 cut(s) | 26, 215 |
| BspT107I | GGYRCC | 1 cut(s) | 1321 |
| BspTNI | GGTCTC | 2 cut(s) | 410, 437 |
| BsrDI | GCAATG | 1 cut(s) | 1340 |
| BsrFI | RCCGGY | 2 cut(s) | 776, 1162 |
| BsrI | ACTGG | 4 cut(s) | 274, 672, 825, 1084 |
| BssAI | RCCGGY | 2 cut(s) | 776, 1162 |
| BssECI | CCNNGG | 2 cut(s) | 447, 1262 |
| BssMI | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| BssNAI | GTATAC | 1 cut(s) | 1030 |
| BssNI | GRCGYC | 3 cut(s) | 839, 1056, 1322 |
| Bst1107I | GTATAC | 1 cut(s) | 1030 |
| Bst4CI | ACNGT | 5 cut(s) | 448, 502, 555, 967, 1003 |
| Bst6I | CTCTTC | 3 cut(s) | 95, 113, 351 |
| BstACI | GRCGYC | 3 cut(s) | 839, 1056, 1322 |
| BstBI | TTCGAA | 2 cut(s) | 26, 215 |
| BstC8I | GCNNGC | 4 cut(s) | 86, 358, 430, 1418 |
| BstDEI | CTNAG | 5 cut(s) | 15, 237, 441, 513, 537 |
| BstDSI | CCRYGG | 1 cut(s) | 447 |
| BstF5I | GGATG | 4 cut(s) | 293, 829, 1207, 1420 |
| BstFNI | CGCG | 2 cut(s) | 432, 1327 |
| BstH2I | RGCGCY | 2 cut(s) | 455, 1325 |
| BstHHI | GCGC | 2 cut(s) | 454, 1324 |
| BstKTI | GATC | 4 cut(s) | 319, 547, 868, 1150 |
| BstMAI | GTCTC | 5 cut(s) | 48, 73, 159, 410, 437 |
| BstMBI | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 233, 638, 647, 656, 1267, 1330 |
| BstNSI | RCATGY | 1 cut(s) | 1420 |
| BstSLI | GKGCMC | 1 cut(s) | 652 |
| BstUI | CGCG | 2 cut(s) | 432, 1327 |
| BstV1I | GCAGC | 3 cut(s) | 916, 1081, 1374 |
| BstV2I | GAAGAC | 3 cut(s) | 533, 874, 1182 |
| BstX2I | RGATCY | 1 cut(s) | 1147 |
| BstYI | RGATCY | 1 cut(s) | 1147 |
| BstZ17I | GTATAC | 1 cut(s) | 1030 |
| BsuI | GTATCC | 1 cut(s) | 859 |
| BsuRI | GGCC | 2 cut(s) | 816, 1162 |
| BtgI | CCRYGG | 1 cut(s) | 447 |
| BtgZI | GCGATG | 1 cut(s) | 1356 |
| BtrI | CACGTC | 1 cut(s) | 331 |
| BtsCI | GGATG | 4 cut(s) | 293, 829, 1207, 1420 |
| BtsI | GCAGTG | 1 cut(s) | 372 |
| BtsIMutI | CAGTG | 3 cut(s) | 372, 972, 1091 |
| BveI | ACCTGC | 1 cut(s) | 623 |
| Cac8I | GCNNGC | 4 cut(s) | 86, 358, 430, 1418 |
| CfoI | GCGC | 2 cut(s) | 454, 1324 |
| Cfr10I | RCCGGY | 2 cut(s) | 776, 1162 |
| Cfr13I | GGNCC | 1 cut(s) | 1303 |
| CseI | GACGC | 2 cut(s) | 314, 847 |
| Csp6I | GTAC | 4 cut(s) | 254, 559, 665, 1288 |
| CviAII | CATG | 7 cut(s) | 335, 548, 869, 892, 1008, 1252, 1417 |
| CviQI | GTAC | 4 cut(s) | 254, 559, 665, 1288 |
| DdeI | CTNAG | 5 cut(s) | 15, 237, 441, 513, 537 |
| DinI | GGCGCC | 1 cut(s) | 1323 |
| DpnI | GATC | 4 cut(s) | 318, 546, 867, 1149 |
| DpnII | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| DraI | TTTAAA | 1 cut(s) | 925 |
| DraIII | CACNNNGTG | 1 cut(s) | 199 |
| Eam1104I | CTCTTC | 3 cut(s) | 95, 113, 351 |
| EarI | CTCTTC | 3 cut(s) | 95, 113, 351 |
| EciI | GGCGGA | 1 cut(s) | 300 |
| Ecl136II | GAGCTC | 1 cut(s) | 126 |
| Eco24I | GRGCYC | 1 cut(s) | 128 |
| Eco31I | GGTCTC | 2 cut(s) | 410, 437 |
| Eco32I | GATATC | 1 cut(s) | 701 |
| Eco47I | GGWCC | 1 cut(s) | 1303 |
| Eco53kI | GAGCTC | 1 cut(s) | 126 |
| Eco88I | CYCGRG | 1 cut(s) | 364 |
| EcoICRI | GAGCTC | 1 cut(s) | 126 |
| EcoRV | GATATC | 1 cut(s) | 701 |
| EcoT22I | ATGCAT | 1 cut(s) | 1422 |
| EcoT38I | GRGCYC | 1 cut(s) | 128 |
| EgeI | GGCGCC | 1 cut(s) | 1323 |
| EheI | GGCGCC | 1 cut(s) | 1323 |
| Esp3I | CGTCTC | 1 cut(s) | 48 |
| FaeI | CATG | 7 cut(s) | 338, 551, 872, 895, 1011, 1255, 1420 |
| FaqI | GGGAC | 1 cut(s) | 583 |
| FatI | CATG | 7 cut(s) | 334, 547, 868, 891, 1007, 1251, 1416 |
| FauI | CCCGC | 1 cut(s) | 180 |
| FbaI | TGATCA | 2 cut(s) | 316, 544 |
| FblI | GTMKAC | 1 cut(s) | 1029 |
| Fnu4HI | GCNGC | 5 cut(s) | 5, 930, 1070, 1325, 1363 |
| FokI | GGATG | 4 cut(s) | 300, 816, 1214, 1407 |
| FriOI | GRGCYC | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 5 cut(s) | 5, 930, 1070, 1325, 1363 |
| FspBI | CTAG | 1 cut(s) | 726 |
| GlaI | GCGC | 2 cut(s) | 453, 1323 |
| GluI | GCNGC | 5 cut(s) | 5, 930, 1070, 1325, 1363 |
| GsuI | CTGGAG | 1 cut(s) | 1292 |
| HaeII | RGCGCY | 2 cut(s) | 455, 1325 |
| HaeIII | GGCC | 2 cut(s) | 816, 1162 |
| HapII | CCGG | 4 cut(s) | 777, 833, 1052, 1163 |
| HgaI | GACGC | 2 cut(s) | 314, 847 |
| HhaI | GCGC | 2 cut(s) | 454, 1324 |
| Hin1I | GRCGYC | 3 cut(s) | 839, 1056, 1322 |
| Hin1II | CATG | 7 cut(s) | 338, 551, 872, 895, 1011, 1255, 1420 |
| Hin6I | GCGC | 2 cut(s) | 452, 1322 |
| HinP1I | GCGC | 2 cut(s) | 452, 1322 |
| HindIII | AAGCTT | 1 cut(s) | 131 |
| HinfI | GANTC | 5 cut(s) | 217, 683, 722, 941, 1206 |
| HpaII | CCGG | 4 cut(s) | 777, 833, 1052, 1163 |
| HphI | GGTGA | 3 cut(s) | 380, 535, 847 |
| Hpy166II | GTNNAC | 4 cut(s) | 120, 993, 1030, 1288 |
| Hpy188I | TCNGA | 8 cut(s) | 222, 442, 488, 580, 608, 789, 1283, 1388 |
| Hpy188III | TCNNGA | 6 cut(s) | 158, 205, 299, 1110, 1178, 1210 |
| Hpy8I | GTNNAC | 4 cut(s) | 120, 993, 1030, 1288 |
| HpyAV | CCTTC | 8 cut(s) | 33, 104, 238, 317, 667, 1152, 1323, 1362 |
| HpyCH4III | ACNGT | 5 cut(s) | 448, 502, 555, 967, 1003 |
| HpyCH4IV | ACGT | 4 cut(s) | 139, 195, 330, 1056 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 233, 638, 647, 656, 1267, 1330 |
| HpyF3I | CTNAG | 5 cut(s) | 15, 237, 441, 513, 537 |
| HpySE526I | ACGT | 4 cut(s) | 139, 195, 330, 1056 |
| Hsp92I | GRCGYC | 3 cut(s) | 839, 1056, 1322 |
| Hsp92II | CATG | 7 cut(s) | 338, 551, 872, 895, 1011, 1255, 1420 |
| HspAI | GCGC | 2 cut(s) | 452, 1322 |
| KasI | GGCGCC | 1 cut(s) | 1321 |
| Ksp22I | TGATCA | 2 cut(s) | 316, 544 |
| Kzo9I | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| LguI | GCTCTTC | 2 cut(s) | 95, 113 |
| LmnI | GCTCC | 1 cut(s) | 1247 |
| Lsp1109I | GCAGC | 3 cut(s) | 916, 1081, 1374 |
| LweI | GCATC | 4 cut(s) | 151, 369, 838, 865 |
| MaeI | CTAG | 1 cut(s) | 726 |
| MaeII | ACGT | 4 cut(s) | 139, 195, 330, 1056 |
| MaeIII | GTNAC | 6 cut(s) | 326, 368, 386, 835, 954, 1013 |
| MalI | GATC | 4 cut(s) | 318, 546, 867, 1149 |
| MboI | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| MflI | RGATCY | 1 cut(s) | 1147 |
| MhlI | GDGCHC | 3 cut(s) | 128, 195, 652 |
| MluCI | AATT | 3 cut(s) | 517, 1237, 1367 |
| MluI | ACGCGT | 1 cut(s) | 430 |
| Mly113I | GGCGCC | 1 cut(s) | 1322 |
| MlyI | GAGTC | 1 cut(s) | 716 |
| MmeI | TCCRAC | 1 cut(s) | 739 |
| Mph1103I | ATGCAT | 1 cut(s) | 1422 |
| MseI | TTAA | 2 cut(s) | 764, 924 |
| MslI | CAYNNNNRTG | 4 cut(s) | 333, 465, 711, 789 |
| MspI | CCGG | 4 cut(s) | 777, 833, 1052, 1163 |
| Mva1269I | GAATGC | 1 cut(s) | 1397 |
| MvnI | CGCG | 2 cut(s) | 432, 1327 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 233, 638, 647, 656, 1267, 1330 |
| NarI | GGCGCC | 1 cut(s) | 1322 |
| NdeII | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| NlaIII | CATG | 7 cut(s) | 338, 551, 872, 895, 1011, 1255, 1420 |
| NlaIV | GGNNCC | 3 cut(s) | 272, 1149, 1323 |
| NmeAIII | GCCGAG | 2 cut(s) | 732, 1287 |
| NmuCI | GTSAC | 3 cut(s) | 326, 368, 835 |
| NsiI | ATGCAT | 1 cut(s) | 1422 |
| NspI | RCATGY | 1 cut(s) | 1420 |
| NspV | TTCGAA | 2 cut(s) | 26, 215 |
| PaeI | GCATGC | 1 cut(s) | 1420 |
| PciSI | GCTCTTC | 2 cut(s) | 95, 113 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1062 |
| PctI | GAATGC | 1 cut(s) | 1397 |
| PfeI | GAWTC | 4 cut(s) | 217, 683, 941, 1206 |
| PkrI | GCNGC | 5 cut(s) | 6, 931, 1071, 1326, 1364 |
| PleI | GAGTC | 1 cut(s) | 716 |
| PluTI | GGCGCC | 1 cut(s) | 1325 |
| PpsI | GAGTC | 1 cut(s) | 716 |
| Psp124BI | GAGCTC | 1 cut(s) | 128 |
| PspN4I | GGNNCC | 3 cut(s) | 272, 1149, 1323 |
| PspPI | GGNCC | 1 cut(s) | 1303 |
| PsuI | RGATCY | 1 cut(s) | 1147 |
| RsaI | GTAC | 4 cut(s) | 255, 560, 666, 1289 |
| RsaNI | GTAC | 4 cut(s) | 254, 559, 665, 1288 |
| RseI | CAYNNNNRTG | 4 cut(s) | 333, 465, 711, 789 |
| SacI | GAGCTC | 1 cut(s) | 128 |
| SapI | GCTCTTC | 2 cut(s) | 95, 113 |
| SaqAI | TTAA | 2 cut(s) | 764, 924 |
| SatI | GCNGC | 5 cut(s) | 5, 930, 1070, 1325, 1363 |
| Sau3AI | GATC | 4 cut(s) | 316, 544, 865, 1147 |
| Sau96I | GGNCC | 1 cut(s) | 1303 |
| ScaI | AGTACT | 1 cut(s) | 666 |
| SchI | GAGTC | 1 cut(s) | 716 |
| SduI | GDGCHC | 3 cut(s) | 128, 195, 652 |
| SfaNI | GCATC | 4 cut(s) | 151, 369, 838, 865 |
| SfoI | GGCGCC | 1 cut(s) | 1323 |
| SfuI | TTCGAA | 2 cut(s) | 26, 215 |
| SinI | GGWCC | 1 cut(s) | 1303 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 333, 465, 711, 789 |
| SmlI | CTYRAG | 3 cut(s) | 156, 188, 407 |
| SmoI | CTYRAG | 3 cut(s) | 156, 188, 407 |
| SphI | GCATGC | 1 cut(s) | 1420 |
| Sse9I | AATT | 3 cut(s) | 517, 1237, 1367 |
| SsiI | CCGC | 5 cut(s) | 173, 311, 402, 1199, 1325 |
| SspDI | GGCGCC | 1 cut(s) | 1321 |
| SspMI | CTAG | 1 cut(s) | 726 |
| SstI | GAGCTC | 1 cut(s) | 128 |
| TaaI | ACNGT | 5 cut(s) | 448, 502, 555, 967, 1003 |
| TaiI | ACGT | 4 cut(s) | 142, 198, 333, 1059 |
| TaqI | TCGA | 7 cut(s) | 26, 179, 215, 300, 864, 1156, 1380 |
| TasI | AATT | 3 cut(s) | 517, 1237, 1367 |
| TatI | WGTACW | 2 cut(s) | 664, 1287 |
| TauI | GCSGC | 1 cut(s) | 1327 |
| TfiI | GAWTC | 4 cut(s) | 217, 683, 941, 1206 |
| Tru1I | TTAA | 2 cut(s) | 764, 924 |
| Tru9I | TTAA | 2 cut(s) | 764, 924 |
| TscAI | CASTG | 3 cut(s) | 379, 972, 1091 |
| TseFI | GTSAC | 3 cut(s) | 326, 368, 835 |
| TseI | GCWGC | 4 cut(s) | 4, 929, 1069, 1362 |
| Tsp45I | GTSAC | 3 cut(s) | 326, 368, 835 |
| TspDTI | ATGAA | 2 cut(s) | 52, 1328 |
| TspGWI | ACGGA | 4 cut(s) | 30, 1047, 1140, 1413 |
| TspRI | CASTG | 3 cut(s) | 379, 972, 1091 |
| VpaK11BI | GGWCC | 1 cut(s) | 1303 |
| XapI | RAATTY | 1 cut(s) | 517 |
| XceI | RCATGY | 1 cut(s) | 1420 |
| XmiI | GTMKAC | 1 cut(s) | 1029 |
| XspI | CTAG | 1 cut(s) | 726 |
| ZraI | GACGTC | 1 cut(s) | 1057 |
| ZrmI | AGTACT | 1 cut(s) | 666 |
| Zsp2I | ATGCAT | 1 cut(s) | 1422 |