MD17G1142500.v1.1

Protein TOO MANY

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
12834952 .. 12836600
1649 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1142500.v1.1.491

Sequence Viewer

Length: 1542 bp
ATGACTTCCCCCTCCCACTTATTATCGCTCCTATCACTTCAATCACTTCTCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTAGCACTCTCACGTGAGGTTAAAACTGTAAAGCCAGACAACAAAATGCTGCAACTCTCCGAACCTCCCATATACCTTGACACAATGTGCCTTCCCTTCCCACTCTCTCTCCCTCCACTCCTCCTCCTCCTCCTCCTGCTCCTCCTCTCTCACCCTCCTTCGACCACCACCGCCGCCACCATGCTTCCATCTGAATCAGAAACCCTGTTCAAGATCATGGAATCCATGTCCTCTGATCAACCCTGGAGGATTTCCCATCCTACCCCTTGCCAACCCTCCTCCTCCTGGCCCGGAATCGAGTGCAAAATCGGAAAAGACAACCGCCCCCATGTCTCCCGGCTAGATTTTGGCACCTCACCAAACCCCTCCTGCAAAAAAACAGCCACATTCCCTTCCCTAATCTTCTCCCTCCCGTTTCTCCAATCTGCTTTCTTCTTCAACTGCTTCACTCACACAAAAACCACCCTCTCTGTTTCTCAAAACAGAGCATCATCCCCTGCCTCCCTCCAGCAGCTCAGCCTCCGGTCCAACCCGGCACTCTCCGGCCCAATCCCACCACAAATATCCGACCTCAAGTCCCTTGAGATCCTCACATTGTCACAAAACCGCCTCTCCGGTCCGATCCCCTCGGAGATTTTCACCCTTCGGAAACTAATCCACCTTGATTTGAGTTACAATGTGCTCACAGGCACCATCCCTATGCAGCTGGGCAGTCTCAGAAACCTCCAAGGCCTTGATTTAAGCTACAATTCTCTCATAGGCTCCATCCCAGACACAGTTGGTCAACTGGGTTTGCTTCAAAAAGTTGACTTCAGCTCCAATCAACTCACAGGCTCCATCCCCAATGGCATCGAAAAGCTCGGTTTTTTGGTTTTCATGGCGTTAAGCAACAACAAATTAAGTGGGAAATTTCCGAAGGGGTTGGAAAAGTTGCAGAGCTTGCAGTATTTCATTTTAGACGGCAATCCAATGCACATTCCTCTGCCATTGGAGTTTGGTAAATTGGTGAAGCTCCAAGAACTCAGGCTGGCTGATTCCGGCTACTCGGGCACCATCCCGGAATCCTTCTCCCAGCTCAAGAATTTGAGCACTCTGTCGCTGCAGGATAACCGGCTAACGGGCGAAATCCCGGTCGGGTTTGGGAGCCTCTCGCACATTTACCACATGAATCTGAGCAGAAACATGTTGGGGGGTGTTGTGCCTTTCAATGCAAGTTTCCTCAAGAGGTTGGGGAGGAACTTGGACCTCAGTGGAAACCCAGGTCTCTGTGTGAGTTCCTCAGAAGCTCACAGTTTGAAAGTTGGAGTTAATGTCTGCGGAAGCAGTGATCAGATTGCTTCACCTGCCCTGCCATTGAAGAATTCTCAAGCTCCTTCTCCATCTGGGCTCTCCATAAAACCATTTTTTCTGTATGCTGTTTTGTGTGTTTTGGGATTACATCATCAGATGTTTTTAGTGTGA

Protein Analysis

514

Amino Acids

55.67

Weight (kDa)

9.02

Isoelectric Point (pI)

53.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 199 - 274 5.1e-07 Leucine-rich repeat region
LRR_8 PF13855 220 - 279 4.6e-08 Leucine rich repeat
LRR_14 PF23598 262 - 343 8.3e-07 Leucine-rich repeat region
LRR_14 PF23598 334 - 418 2.4e-06 Leucine-rich repeat region
LRR_8 PF13855 364 - 423 6.4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1432
Acc36I ACCTGC 1 cut(s) 1432
AccB1I GGYRCC 3 cut(s) 431, 770, 1130
AciI CCGC 5 cut(s) 252, 255, 403, 688, 1398
AclWI GGATC 2 cut(s) 661, 697
AcsI RAATTY 3 cut(s) 989, 1162, 1441
AcuI CTGAAG 1 cut(s) 877
AcvI CACGTG 1 cut(s) 95
AdeI CACNNNGTG 1 cut(s) 168
AfiI CCNNNNNNNGG 2 cut(s) 366, 1198
AflIII ACRYGT 1 cut(s) 1263
AgsI TTSAA 7 cut(s) 41, 292, 520, 881, 1288, 1378, 1438
AhdI GACNNNNNGTC 1 cut(s) 655
AjnI CCWGG 3 cut(s) 323, 365, 1339
Alw21I GWGCWC 2 cut(s) 765, 1172
Alw26I GTCTC 3 cut(s) 418, 800, 1349
AlwI GGATC 2 cut(s) 661, 697
Ama87I CYCGRG 1 cut(s) 1126
AoxI GGCC 3 cut(s) 368, 625, 811
ApeKI GCWGC 4 cut(s) 130, 592, 784, 1180
ApoI RAATTY 3 cut(s) 989, 1162, 1441
ArsI GACNNNNNNTTYG 2 cut(s) 1197, 1229
AspS9I GGNCC 5 cut(s) 369, 606, 626, 698, 1324
AsuC2I CCSGG 5 cut(s) 372, 418, 614, 1139, 1211
AsuHPI GGTGA 5 cut(s) 224, 429, 712, 1099, 1413
AvaI CYCGRG 1 cut(s) 1126
AvaII GGWCC 3 cut(s) 606, 698, 1324
BaeGI GKGCMC 1 cut(s) 1133
BanI GGYRCC 3 cut(s) 431, 770, 1130
BanII GRGCYC 1 cut(s) 1470
BbrPI CACGTG 1 cut(s) 95
Bbv12I GWGCWC 2 cut(s) 765, 1172
BbvI GCAGC 4 cut(s) 117, 604, 796, 1167
BccI CCATC 7 cut(s) 277, 345, 782, 854, 926, 1142, 1468
BceAI ACGGC 1 cut(s) 1057
BciT130I CCWGG 3 cut(s) 325, 367, 1341
BclI TGATCA 2 cut(s) 316, 1408
BcnI CCSGG 5 cut(s) 372, 418, 614, 1139, 1211
BcoDI GTCTC 3 cut(s) 418, 800, 1349
BfaI CTAG 2 cut(s) 83, 422
BfmI CTRYAG 1 cut(s) 1181
BfuAI ACCTGC 1 cut(s) 1432
BisI GCNGC 5 cut(s) 131, 255, 593, 785, 1181
BlpI GCTNAGC 1 cut(s) 596
BlsI GCNGC 5 cut(s) 132, 256, 594, 786, 1182
Bme1390I CCNGG 8 cut(s) 325, 367, 372, 418, 614, 1139, 1211, 1341
Bme18I GGWCC 3 cut(s) 606, 698, 1324
BmeRI GACNNNNNGTC 1 cut(s) 655
BmeT110I CYCGRG 1 cut(s) 1126
BmgT120I GGNCC 5 cut(s) 369, 606, 626, 698, 1324
BmiI GGNNCC 6 cut(s) 433, 772, 844, 916, 1132, 1226
BmrFI CCNGG 8 cut(s) 325, 367, 372, 418, 614, 1139, 1211, 1341
BmrI ACTGGG 1 cut(s) 878
BmsI GCATC 2 cut(s) 578, 939
BmuI ACTGGG 1 cut(s) 878
BpmI CTGGAG 2 cut(s) 346, 572
Bpu1102I GCTNAGC 1 cut(s) 596
BpuEI CTTGAG 5 cut(s) 638, 683, 1142, 1286, 1431
BpuMI CCSGG 5 cut(s) 372, 418, 614, 1139, 1211
BsaAI YACGTR 1 cut(s) 95
BsaI GGTCTC 1 cut(s) 1349
BsaJI CCNNGG 4 cut(s) 323, 708, 808, 1339
BsaWI WCCGGW 2 cut(s) 603, 695
Bsc4I CCNNNNNNNGG 2 cut(s) 366, 1198
Bse118I RCCGGY 1 cut(s) 1191
Bse1I ACTGG 1 cut(s) 873
BseBI CCWGG 3 cut(s) 325, 367, 1341
BseDI CCNNGG 4 cut(s) 323, 708, 808, 1339
BseGI GGATG 6 cut(s) 337, 572, 774, 846, 918, 1134
BseLI CCNNNNNNNGG 2 cut(s) 366, 1198
BseMII CTCAG 6 cut(s) 610, 811, 1117, 1244, 1342, 1374
BseNI ACTGG 1 cut(s) 873
BseRI GAGGAG 9 cut(s) 191, 194, 197, 200, 203, 212, 215, 349, 352
BseSI GKGCMC 1 cut(s) 1133
BseXI GCAGC 4 cut(s) 117, 604, 796, 1167
BseYI CCCAGC 2 cut(s) 787, 1152
Bsh1285I CGRYCG 1 cut(s) 1215
BshFI GGCC 3 cut(s) 370, 627, 813
BshNI GGYRCC 3 cut(s) 431, 770, 1130
BsiEI CGRYCG 1 cut(s) 1215
BsiHKAI GWGCWC 2 cut(s) 765, 1172
BsiHKCI CYCGRG 1 cut(s) 1126
BslFI GGGAC 1 cut(s) 643
BslI CCNNNNNNNGG 2 cut(s) 366, 1198
BsmAI GTCTC 3 cut(s) 418, 800, 1349
BsmFI GGGAC 1 cut(s) 643
BsnI GGCC 3 cut(s) 370, 627, 813
Bso31I GGTCTC 1 cut(s) 1349
BsoBI CYCGRG 1 cut(s) 1126
Bsp1286I GDGCHC 4 cut(s) 765, 1133, 1172, 1470
Bsp143I GATC 5 cut(s) 294, 316, 666, 702, 1408
Bsp1720I GCTNAGC 1 cut(s) 596
BspACI CCGC 5 cut(s) 252, 255, 403, 688, 1398
BspANI GGCC 3 cut(s) 370, 627, 813
BspCNI CTCAG 6 cut(s) 609, 810, 1116, 1245, 1341, 1373
BspLI GGNNCC 6 cut(s) 433, 772, 844, 916, 1132, 1226
BspMAI CTGCAG 1 cut(s) 1185
BspMI ACCTGC 1 cut(s) 1432
BspPI GGATC 2 cut(s) 661, 697
BspT107I GGYRCC 3 cut(s) 431, 770, 1130
BspTNI GGTCTC 1 cut(s) 1349
BsrFI RCCGGY 1 cut(s) 1191
BsrI ACTGG 1 cut(s) 873
BssAI RCCGGY 1 cut(s) 1191
BssECI CCNNGG 4 cut(s) 323, 708, 808, 1339
BssMI GATC 5 cut(s) 294, 316, 666, 702, 1408
BssT1I CCWWGG 1 cut(s) 808
Bst2UI CCWGG 3 cut(s) 325, 367, 1341
Bst4CI ACNGT 3 cut(s) 109, 859, 1373
BstAPI GCANNNNNTGC 1 cut(s) 1021
BstBAI YACGTR 1 cut(s) 95
BstC8I GCNNGC 2 cut(s) 1022, 1110
BstDEI CTNAG 6 cut(s) 596, 797, 1103, 1253, 1328, 1360
BstF5I GGATG 6 cut(s) 337, 572, 774, 846, 918, 1134
BstKTI GATC 5 cut(s) 297, 319, 669, 705, 1411
BstMAI GTCTC 3 cut(s) 418, 800, 1349
BstMBI GATC 5 cut(s) 294, 316, 666, 702, 1408
BstMCI CGRYCG 1 cut(s) 1215
BstMWI GCNNNNNNNGC 3 cut(s) 1021, 1128, 1424
BstNI CCWGG 3 cut(s) 325, 367, 1341
BstNSI RCATGY 1 cut(s) 1267
BstSCI CCNGG 8 cut(s) 323, 365, 370, 416, 612, 1137, 1209, 1339
BstSFI CTRYAG 1 cut(s) 1181
BstSLI GKGCMC 1 cut(s) 1133
BstV1I GCAGC 4 cut(s) 117, 604, 796, 1167
BstX2I RGATCY 1 cut(s) 666
BstYI RGATCY 1 cut(s) 666
BsuRI GGCC 3 cut(s) 370, 627, 813
BtsCI GGATG 6 cut(s) 337, 572, 774, 846, 918, 1134
BtsI GCAGTG 1 cut(s) 1411
BtsIMutI CAGTG 2 cut(s) 1336, 1411
BveI ACCTGC 1 cut(s) 1432
Cac8I GCNNGC 2 cut(s) 1022, 1110
Cfr10I RCCGGY 1 cut(s) 1191
Cfr13I GGNCC 5 cut(s) 369, 606, 626, 698, 1324
CpoI CGGWCCG 1 cut(s) 698
CspCI CAANNNNNGTGG 2 cut(s) 964, 999
CspI CGGWCCG 1 cut(s) 698
CviAII CATG 7 cut(s) 262, 298, 307, 410, 958, 1246, 1264
DdeI CTNAG 6 cut(s) 596, 797, 1103, 1253, 1328, 1360
DpnI GATC 5 cut(s) 296, 318, 668, 704, 1410
DpnII GATC 5 cut(s) 294, 316, 666, 702, 1408
DraIII CACNNNGTG 1 cut(s) 168
DriI GACNNNNNGTC 1 cut(s) 655
Eam1105I GACNNNNNGTC 1 cut(s) 655
Eco130I CCWWGG 1 cut(s) 808
Eco147I AGGCCT 1 cut(s) 813
Eco24I GRGCYC 1 cut(s) 1470
Eco31I GGTCTC 1 cut(s) 1349
Eco47I GGWCC 3 cut(s) 606, 698, 1324
Eco57I CTGAAG 1 cut(s) 877
Eco72I CACGTG 1 cut(s) 95
Eco88I CYCGRG 1 cut(s) 1126
EcoRI GAATTC 1 cut(s) 1441
EcoRII CCWGG 3 cut(s) 323, 365, 1339
EcoT14I CCWWGG 1 cut(s) 808
EcoT38I GRGCYC 1 cut(s) 1470
ErhI CCWWGG 1 cut(s) 808
FaeI CATG 7 cut(s) 265, 301, 310, 413, 961, 1249, 1267
FaqI GGGAC 1 cut(s) 643
FatI CATG 7 cut(s) 261, 297, 306, 409, 957, 1245, 1263
FbaI TGATCA 2 cut(s) 316, 1408
Fnu4HI GCNGC 5 cut(s) 131, 255, 593, 785, 1181
FokI GGATG 6 cut(s) 324, 559, 761, 833, 905, 1121
FriOI GRGCYC 1 cut(s) 1470
Fsp4HI GCNGC 5 cut(s) 131, 255, 593, 785, 1181
FspBI CTAG 2 cut(s) 83, 422
GluI GCNGC 5 cut(s) 131, 255, 593, 785, 1181
GsaI CCCAGC 2 cut(s) 791, 1156
GsuI CTGGAG 2 cut(s) 346, 572
HaeIII GGCC 3 cut(s) 370, 627, 813
Hin1II CATG 7 cut(s) 265, 301, 310, 413, 961, 1249, 1267
HincII GTYRAC 2 cut(s) 866, 889
HindII GTYRAC 2 cut(s) 866, 889
HinfI GANTC 6 cut(s) 275, 302, 375, 1115, 1142, 1249
HphI GGTGA 5 cut(s) 224, 429, 712, 1099, 1413
Hpy166II GTNNAC 2 cut(s) 866, 889
Hpy188III TCNNGA 3 cut(s) 292, 1159, 1303
Hpy8I GTNNAC 2 cut(s) 866, 889
HpyAV CCTTC 8 cut(s) 182, 187, 249, 483, 734, 991, 1156, 1464
HpyCH4III ACNGT 3 cut(s) 109, 859, 1373
HpyCH4IV ACGT 1 cut(s) 94
HpyCH4V TGCA 9 cut(s) 133, 384, 453, 784, 1015, 1024, 1054, 1183, 1292
HpyF10VI GCNNNNNNNGC 3 cut(s) 1021, 1128, 1424
HpyF3I CTNAG 6 cut(s) 596, 797, 1103, 1253, 1328, 1360
HpySE526I ACGT 1 cut(s) 94
Hsp92II CATG 7 cut(s) 265, 301, 310, 413, 961, 1249, 1267
Ksp22I TGATCA 2 cut(s) 316, 1408
Kzo9I GATC 5 cut(s) 294, 316, 666, 702, 1408
LmnI GCTCC 8 cut(s) 33, 225, 848, 902, 920, 1098, 1224, 1456
Lsp1109I GCAGC 4 cut(s) 117, 604, 796, 1167
LweI GCATC 2 cut(s) 578, 939
MaeI CTAG 2 cut(s) 83, 422
MaeII ACGT 1 cut(s) 94
MaeIII GTNAC 2 cut(s) 678, 752
MalI GATC 5 cut(s) 296, 318, 668, 704, 1410
MboI GATC 5 cut(s) 294, 316, 666, 702, 1408
MboII GAAGA 4 cut(s) 475, 505, 508, 1450
MflI RGATCY 1 cut(s) 666
MhlI GDGCHC 4 cut(s) 765, 1133, 1172, 1470
MluCI AATT 6 cut(s) 829, 977, 989, 1082, 1162, 1441
MmeI TCCRAC 4 cut(s) 633, 672, 984, 1363
MseI TTAA 5 cut(s) 102, 821, 965, 980, 1389
MslI CAYNNNNRTG 1 cut(s) 779
MspA1I CMGCKG 1 cut(s) 787
MspR9I CCNGG 8 cut(s) 325, 367, 372, 418, 614, 1139, 1211, 1341
MvaI CCWGG 3 cut(s) 325, 367, 1341
MwoI GCNNNNNNNGC 3 cut(s) 1021, 1128, 1424
NciI CCSGG 5 cut(s) 372, 418, 614, 1139, 1211
NdeII GATC 5 cut(s) 294, 316, 666, 702, 1408
NlaIII CATG 7 cut(s) 265, 301, 310, 413, 961, 1249, 1267
NlaIV GGNNCC 6 cut(s) 433, 772, 844, 916, 1132, 1226
NmuCI GTSAC 1 cut(s) 678
NspI RCATGY 1 cut(s) 1267
PaqCI CACCTGC 1 cut(s) 1432
PceI AGGCCT 1 cut(s) 813
PciI ACATGT 1 cut(s) 1263
PfeI GAWTC 6 cut(s) 275, 302, 375, 1115, 1142, 1249
PfoI TCCNGGA 1 cut(s) 1137
PkrI GCNGC 5 cut(s) 132, 256, 594, 786, 1182
PmaCI CACGTG 1 cut(s) 95
PmlI CACGTG 1 cut(s) 95
Ppu21I YACGTR 1 cut(s) 95
PscI ACATGT 1 cut(s) 1263
Psp6I CCWGG 3 cut(s) 323, 365, 1339
PspCI CACGTG 1 cut(s) 95
PspFI CCCAGC 2 cut(s) 787, 1152
PspGI CCWGG 3 cut(s) 323, 365, 1339
PspN4I GGNNCC 6 cut(s) 433, 772, 844, 916, 1132, 1226
PspPI GGNCC 5 cut(s) 369, 606, 626, 698, 1324
PstI CTGCAG 1 cut(s) 1185
PsuI RGATCY 1 cut(s) 666
PvuII CAGCTG 1 cut(s) 787
RseI CAYNNNNRTG 1 cut(s) 779
Rsr2I CGGWCCG 1 cut(s) 698
RsrII CGGWCCG 1 cut(s) 698
SaqAI TTAA 5 cut(s) 102, 821, 965, 980, 1389
SatI GCNGC 5 cut(s) 131, 255, 593, 785, 1181
Sau3AI GATC 5 cut(s) 294, 316, 666, 702, 1408
Sau96I GGNCC 5 cut(s) 369, 606, 626, 698, 1324
ScrFI CCNGG 8 cut(s) 325, 367, 372, 418, 614, 1139, 1211, 1341
SduI GDGCHC 4 cut(s) 765, 1133, 1172, 1470
SfaNI GCATC 2 cut(s) 578, 939
SfcI CTRYAG 1 cut(s) 1181
SinI GGWCC 3 cut(s) 606, 698, 1324
SmiMI CAYNNNNRTG 1 cut(s) 779
SmlI CTYRAG 5 cut(s) 653, 662, 1157, 1301, 1446
SmoI CTYRAG 5 cut(s) 653, 662, 1157, 1301, 1446
Sse9I AATT 6 cut(s) 829, 977, 989, 1082, 1162, 1441
SseBI AGGCCT 1 cut(s) 813
SsiI CCGC 5 cut(s) 252, 255, 403, 688, 1398
SspMI CTAG 2 cut(s) 83, 422
StuI AGGCCT 1 cut(s) 813
StyD4I CCNGG 8 cut(s) 323, 365, 370, 416, 612, 1137, 1209, 1339
StyI CCWWGG 1 cut(s) 808
TaaI ACNGT 3 cut(s) 109, 859, 1373
TaiI ACGT 1 cut(s) 97
TaqI TCGA 3 cut(s) 242, 378, 933
TasI AATT 6 cut(s) 829, 977, 989, 1082, 1162, 1441
TauI GCSGC 1 cut(s) 257
TfiI GAWTC 6 cut(s) 275, 302, 375, 1115, 1142, 1249
Tru1I TTAA 5 cut(s) 102, 821, 965, 980, 1389
Tru9I TTAA 5 cut(s) 102, 821, 965, 980, 1389
TscAI CASTG 2 cut(s) 1336, 1411
TseFI GTSAC 1 cut(s) 678
TseI GCWGC 4 cut(s) 130, 592, 784, 1180
Tsp45I GTSAC 1 cut(s) 678
TspDTI ATGAA 3 cut(s) 946, 1021, 1262
TspRI CASTG 2 cut(s) 1336, 1411
VpaK11BI GGWCC 3 cut(s) 606, 698, 1324
XapI RAATTY 3 cut(s) 989, 1162, 1441
XceI RCATGY 1 cut(s) 1267
XspI CTAG 2 cut(s) 83, 422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.