Protein TOO MANY
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G42800 |
| fragaria_vesca | FvH4_6g37770 |
| malus_domestica | MD09G1156200.v1.1 MD17G1142500.v1.1 |
| prunus_persica | Prupe.3G169100_v2.0.a1 Prupe.3G169100_v2.0.a1 |
| pyrus_communis | pycom09g07500 pycom17g13570 |
| rosa_chinensis | RchiOBHm_Chr2g0150831 |
| rosa_laevigata | RLG00000020510 |
| rosa_multiflora | Rmu_sc0003127.1_g000061 Rmu_sc0007617.1_g000016 Rmu_sc0024470.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00096930 |
| rosa_rugosa | Rorug02G0422600 |
| rosa_samantha | Rh2AG482900 Rh2BG495500 Rh2CG469200 Rh2DG506300 |
| rosa_wichuraiana | Rw2G039580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1531 |
| Acc36I | ACCTGC | 1 cut(s) | 1531 |
| AccB1I | GGYRCC | 2 cut(s) | 869, 1229 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 58 |
| AccIII | TCCGGA | 1 cut(s) | 825 |
| AciI | CCGC | 4 cut(s) | 347, 502, 787, 1497 |
| AclWI | GGATC | 2 cut(s) | 760, 796 |
| AcoI | YGGCCR | 1 cut(s) | 467 |
| AcsI | RAATTY | 9 cut(s) | 41, 121, 741, 1088, 1261, 1540, 1671, 1757, 1828 |
| AcuI | CTGAAG | 1 cut(s) | 976 |
| AcyI | GRCGYC | 1 cut(s) | 1029 |
| AdeI | CACNNNGTG | 1 cut(s) | 269 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 58, 465, 1297 |
| AflIII | ACRYGT | 1 cut(s) | 1362 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 754 |
| AjnI | CCWGG | 4 cut(s) | 422, 464, 469, 1438 |
| Alw21I | GWGCWC | 2 cut(s) | 864, 1271 |
| Alw26I | GTCTC | 5 cut(s) | 93, 517, 823, 899, 1448 |
| AlwI | GGATC | 2 cut(s) | 760, 796 |
| Ama87I | CYCGRG | 1 cut(s) | 1225 |
| Aor13HI | TCCGGA | 1 cut(s) | 825 |
| AoxI | GGCC | 3 cut(s) | 467, 724, 910 |
| ApeKI | GCWGC | 4 cut(s) | 231, 691, 883, 1279 |
| ApoI | RAATTY | 9 cut(s) | 41, 121, 741, 1088, 1261, 1540, 1671, 1757, 1828 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 86, 118, 1296, 1328 |
| AseI | ATTAAT | 2 cut(s) | 1775, 1812 |
| AspS9I | GGNCC | 4 cut(s) | 705, 725, 797, 1423 |
| AsuC2I | CCSGG | 4 cut(s) | 517, 713, 1238, 1310 |
| AsuHPI | GGTGA | 3 cut(s) | 811, 1198, 1512 |
| AvaI | CYCGRG | 1 cut(s) | 1225 |
| AvaII | GGWCC | 3 cut(s) | 705, 797, 1423 |
| BaeGI | GKGCMC | 1 cut(s) | 1232 |
| BalI | TGGCCA | 1 cut(s) | 469 |
| BanI | GGYRCC | 2 cut(s) | 869, 1229 |
| Bbv12I | GWGCWC | 2 cut(s) | 864, 1271 |
| BbvI | GCAGC | 4 cut(s) | 218, 703, 895, 1266 |
| BccI | CCATC | 9 cut(s) | 375, 391, 444, 881, 953, 1025, 1241, 1567, 1729 |
| BceAI | ACGGC | 1 cut(s) | 1156 |
| BciT130I | CCWGG | 4 cut(s) | 424, 466, 471, 1440 |
| BclI | TGATCA | 2 cut(s) | 415, 1507 |
| BcnI | CCSGG | 4 cut(s) | 517, 713, 1238, 1310 |
| BcoDI | GTCTC | 5 cut(s) | 93, 517, 823, 899, 1448 |
| BfaI | CTAG | 3 cut(s) | 92, 228, 521 |
| BfmI | CTRYAG | 1 cut(s) | 1280 |
| BfuAI | ACCTGC | 1 cut(s) | 1531 |
| BisI | GCNGC | 4 cut(s) | 232, 692, 884, 1280 |
| BlpI | GCTNAGC | 1 cut(s) | 695 |
| BlsI | GCNGC | 4 cut(s) | 233, 693, 885, 1281 |
| Bme1390I | CCNGG | 8 cut(s) | 424, 466, 471, 517, 713, 1238, 1310, 1440 |
| Bme18I | GGWCC | 3 cut(s) | 705, 797, 1423 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 754 |
| BmeT110I | CYCGRG | 1 cut(s) | 1225 |
| BmgT120I | GGNCC | 4 cut(s) | 705, 725, 797, 1423 |
| BmiI | GGNNCC | 5 cut(s) | 871, 943, 1015, 1231, 1325 |
| BmrFI | CCNGG | 8 cut(s) | 424, 466, 471, 517, 713, 1238, 1310, 1440 |
| BmrI | ACTGGG | 2 cut(s) | 977, 1829 |
| BmsI | GCATC | 1 cut(s) | 677 |
| BmuI | ACTGGG | 2 cut(s) | 977, 1829 |
| BpmI | CTGGAG | 1 cut(s) | 445 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 695 |
| BpuEI | CTTGAG | 6 cut(s) | 737, 782, 1241, 1385, 1530, 1830 |
| BpuMI | CCSGG | 4 cut(s) | 517, 713, 1238, 1310 |
| Bsa29I | ATCGAT | 1 cut(s) | 395 |
| BsaAI | YACGTR | 1 cut(s) | 164 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1743 |
| BsaHI | GRCGYC | 1 cut(s) | 1029 |
| BsaI | GGTCTC | 1 cut(s) | 1448 |
| BsaJI | CCNNGG | 4 cut(s) | 422, 807, 907, 1438 |
| BsaWI | WCCGGW | 3 cut(s) | 702, 794, 825 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 58, 465, 1297 |
| Bse1I | ACTGG | 2 cut(s) | 972, 1824 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1743 |
| BseAI | TCCGGA | 1 cut(s) | 825 |
| BseBI | CCWGG | 4 cut(s) | 424, 466, 471, 1440 |
| BseCI | ATCGAT | 1 cut(s) | 395 |
| BseDI | CCNNGG | 4 cut(s) | 422, 807, 907, 1438 |
| BseGI | GGATG | 7 cut(s) | 436, 668, 873, 945, 1017, 1233, 1774 |
| BseJI | GATNNNNATC | 1 cut(s) | 1743 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 58, 465, 1297 |
| BseMII | CTCAG | 7 cut(s) | 98, 709, 910, 1216, 1343, 1441, 1473 |
| BseNI | ACTGG | 2 cut(s) | 972, 1824 |
| BseRI | GAGGAG | 8 cut(s) | 194, 292, 295, 298, 301, 304, 307, 310 |
| BseSI | GKGCMC | 1 cut(s) | 1232 |
| BseXI | GCAGC | 4 cut(s) | 218, 703, 895, 1266 |
| BseYI | CCCAGC | 2 cut(s) | 886, 1251 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1314 |
| BshFI | GGCC | 3 cut(s) | 469, 726, 912 |
| BshNI | GGYRCC | 2 cut(s) | 869, 1229 |
| BshVI | ATCGAT | 1 cut(s) | 395 |
| BsiEI | CGRYCG | 1 cut(s) | 1314 |
| BsiHKAI | GWGCWC | 2 cut(s) | 864, 1271 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1225 |
| BsiSI | CCGG | 9 cut(s) | 517, 703, 713, 723, 795, 826, 1218, 1238, 1310 |
| BslFI | GGGAC | 1 cut(s) | 742 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 58, 465, 1297 |
| BsmAI | GTCTC | 5 cut(s) | 93, 517, 823, 899, 1448 |
| BsmFI | GGGAC | 1 cut(s) | 742 |
| BsnI | GGCC | 3 cut(s) | 469, 726, 912 |
| Bso31I | GGTCTC | 1 cut(s) | 1448 |
| BsoBI | CYCGRG | 1 cut(s) | 1225 |
| Bsp1286I | GDGCHC | 3 cut(s) | 864, 1232, 1271 |
| Bsp13I | TCCGGA | 1 cut(s) | 825 |
| Bsp143I | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 695 |
| BspACI | CCGC | 4 cut(s) | 347, 502, 787, 1497 |
| BspANI | GGCC | 3 cut(s) | 469, 726, 912 |
| BspCNI | CTCAG | 7 cut(s) | 97, 708, 909, 1215, 1344, 1440, 1472 |
| BspDI | ATCGAT | 1 cut(s) | 395 |
| BspEI | TCCGGA | 1 cut(s) | 825 |
| BspHI | TCATGA | 1 cut(s) | 138 |
| BspLI | GGNNCC | 5 cut(s) | 871, 943, 1015, 1231, 1325 |
| BspMAI | CTGCAG | 1 cut(s) | 1284 |
| BspMI | ACCTGC | 1 cut(s) | 1531 |
| BspPI | GGATC | 2 cut(s) | 760, 796 |
| BspT107I | GGYRCC | 2 cut(s) | 869, 1229 |
| BspTNI | GGTCTC | 1 cut(s) | 1448 |
| BsrI | ACTGG | 2 cut(s) | 972, 1824 |
| BssECI | CCNNGG | 4 cut(s) | 422, 807, 907, 1438 |
| BssMI | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| BssNI | GRCGYC | 1 cut(s) | 1029 |
| BssT1I | CCWWGG | 1 cut(s) | 907 |
| Bst2UI | CCWGG | 4 cut(s) | 424, 466, 471, 1440 |
| Bst4CI | ACNGT | 2 cut(s) | 958, 1472 |
| BstACI | GRCGYC | 1 cut(s) | 1029 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1120 |
| BstBAI | YACGTR | 1 cut(s) | 164 |
| BstC8I | GCNNGC | 2 cut(s) | 1121, 1209 |
| BstDEI | CTNAG | 7 cut(s) | 84, 695, 896, 1202, 1352, 1427, 1459 |
| BstF5I | GGATG | 7 cut(s) | 436, 668, 873, 945, 1017, 1233, 1774 |
| BstKTI | GATC | 5 cut(s) | 395, 418, 768, 804, 1510 |
| BstMAI | GTCTC | 5 cut(s) | 93, 517, 823, 899, 1448 |
| BstMBI | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| BstMCI | CGRYCG | 1 cut(s) | 1314 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1120, 1227, 1523 |
| BstNI | CCWGG | 4 cut(s) | 424, 466, 471, 1440 |
| BstNSI | RCATGY | 1 cut(s) | 1366 |
| BstSCI | CCNGG | 8 cut(s) | 422, 464, 469, 515, 711, 1236, 1308, 1438 |
| BstSFI | CTRYAG | 1 cut(s) | 1280 |
| BstSLI | GKGCMC | 1 cut(s) | 1232 |
| BstV1I | GCAGC | 4 cut(s) | 218, 703, 895, 1266 |
| BstX2I | RGATCY | 1 cut(s) | 765 |
| BstYI | RGATCY | 1 cut(s) | 765 |
| Bsu15I | ATCGAT | 1 cut(s) | 395 |
| BsuRI | GGCC | 3 cut(s) | 469, 726, 912 |
| BsuTUI | ATCGAT | 1 cut(s) | 395 |
| BtgZI | GCGATG | 1 cut(s) | 1707 |
| BtsCI | GGATG | 7 cut(s) | 436, 668, 873, 945, 1017, 1233, 1774 |
| BtsI | GCAGTG | 1 cut(s) | 1510 |
| BtsIMutI | CAGTG | 2 cut(s) | 1435, 1510 |
| BveI | ACCTGC | 1 cut(s) | 1531 |
| Cac8I | GCNNGC | 2 cut(s) | 1121, 1209 |
| CciI | TCATGA | 1 cut(s) | 138 |
| Cfr13I | GGNCC | 4 cut(s) | 705, 725, 797, 1423 |
| ClaI | ATCGAT | 1 cut(s) | 395 |
| CpoI | CGGWCCG | 1 cut(s) | 797 |
| CseI | GACGC | 1 cut(s) | 1018 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1063, 1098 |
| CspI | CGGWCCG | 1 cut(s) | 797 |
| CviAII | CATG | 8 cut(s) | 139, 146, 360, 406, 509, 1057, 1345, 1363 |
| DdeI | CTNAG | 7 cut(s) | 84, 695, 896, 1202, 1352, 1427, 1459 |
| DpnI | GATC | 5 cut(s) | 394, 417, 767, 803, 1509 |
| DpnII | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| DraI | TTTAAA | 1 cut(s) | 21 |
| DraIII | CACNNNGTG | 1 cut(s) | 269 |
| DriI | GACNNNNNGTC | 1 cut(s) | 754 |
| EaeI | YGGCCR | 1 cut(s) | 467 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 754 |
| Eco130I | CCWWGG | 1 cut(s) | 907 |
| Eco147I | AGGCCT | 1 cut(s) | 912 |
| Eco31I | GGTCTC | 1 cut(s) | 1448 |
| Eco47I | GGWCC | 3 cut(s) | 705, 797, 1423 |
| Eco57I | CTGAAG | 1 cut(s) | 976 |
| Eco88I | CYCGRG | 1 cut(s) | 1225 |
| EcoRI | GAATTC | 2 cut(s) | 41, 1540 |
| EcoRII | CCWGG | 4 cut(s) | 422, 464, 469, 1438 |
| EcoT14I | CCWWGG | 1 cut(s) | 907 |
| ErhI | CCWWGG | 1 cut(s) | 907 |
| FaeI | CATG | 8 cut(s) | 142, 149, 363, 409, 512, 1060, 1348, 1366 |
| FaqI | GGGAC | 1 cut(s) | 742 |
| FatI | CATG | 8 cut(s) | 138, 145, 359, 405, 508, 1056, 1344, 1362 |
| FbaI | TGATCA | 2 cut(s) | 415, 1507 |
| Fnu4HI | GCNGC | 4 cut(s) | 232, 692, 884, 1280 |
| FokI | GGATG | 7 cut(s) | 423, 655, 860, 932, 1004, 1220, 1781 |
| Fsp4HI | GCNGC | 4 cut(s) | 232, 692, 884, 1280 |
| FspBI | CTAG | 3 cut(s) | 92, 228, 521 |
| GluI | GCNGC | 4 cut(s) | 232, 692, 884, 1280 |
| GsaI | CCCAGC | 2 cut(s) | 890, 1255 |
| GsuI | CTGGAG | 1 cut(s) | 445 |
| HaeIII | GGCC | 3 cut(s) | 469, 726, 912 |
| HapII | CCGG | 9 cut(s) | 517, 703, 713, 723, 795, 826, 1218, 1238, 1310 |
| HgaI | GACGC | 1 cut(s) | 1018 |
| Hin1I | GRCGYC | 1 cut(s) | 1029 |
| Hin1II | CATG | 8 cut(s) | 142, 149, 363, 409, 512, 1060, 1348, 1366 |
| HincII | GTYRAC | 1 cut(s) | 965 |
| HindII | GTYRAC | 1 cut(s) | 965 |
| HindIII | AAGCTT | 1 cut(s) | 188 |
| HinfI | GANTC | 7 cut(s) | 142, 373, 401, 474, 1214, 1241, 1348 |
| HpaII | CCGG | 9 cut(s) | 517, 703, 713, 723, 795, 826, 1218, 1238, 1310 |
| HphI | GGTGA | 3 cut(s) | 811, 1198, 1512 |
| Hpy166II | GTNNAC | 2 cut(s) | 965, 988 |
| Hpy188III | TCNNGA | 8 cut(s) | 92, 139, 390, 826, 1258, 1402, 1748, 1762 |
| Hpy8I | GTNNAC | 2 cut(s) | 965, 988 |
| Hpy99I | CGWCG | 1 cut(s) | 1034 |
| HpyAV | CCTTC | 8 cut(s) | 283, 288, 344, 582, 1255, 1563, 1737, 1741 |
| HpyCH4III | ACNGT | 2 cut(s) | 958, 1472 |
| HpyCH4IV | ACGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 9 cut(s) | 483, 552, 883, 1114, 1123, 1153, 1282, 1391, 1688 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1120, 1227, 1523 |
| HpyF3I | CTNAG | 7 cut(s) | 84, 695, 896, 1202, 1352, 1427, 1459 |
| HpySE526I | ACGT | 1 cut(s) | 163 |
| Hsp92I | GRCGYC | 1 cut(s) | 1029 |
| Hsp92II | CATG | 8 cut(s) | 142, 149, 363, 409, 512, 1060, 1348, 1366 |
| Kpn2I | TCCGGA | 1 cut(s) | 825 |
| Ksp22I | TGATCA | 2 cut(s) | 415, 1507 |
| Kzo9I | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| LmnI | GCTCC | 6 cut(s) | 947, 1001, 1019, 1197, 1323, 1555 |
| Lsp1109I | GCAGC | 4 cut(s) | 218, 703, 895, 1266 |
| LweI | GCATC | 1 cut(s) | 677 |
| MaeI | CTAG | 3 cut(s) | 92, 228, 521 |
| MaeII | ACGT | 1 cut(s) | 163 |
| MaeIII | GTNAC | 2 cut(s) | 777, 851 |
| MalI | GATC | 5 cut(s) | 394, 417, 767, 803, 1509 |
| MboI | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| MboII | GAAGA | 4 cut(s) | 574, 604, 607, 1549 |
| MflI | RGATCY | 1 cut(s) | 765 |
| MhlI | GDGCHC | 3 cut(s) | 864, 1232, 1271 |
| MlsI | TGGCCA | 1 cut(s) | 469 |
| MluNI | TGGCCA | 1 cut(s) | 469 |
| MlyI | GAGTC | 1 cut(s) | 136 |
| MmeI | TCCRAC | 4 cut(s) | 732, 771, 1083, 1462 |
| Mox20I | TGGCCA | 1 cut(s) | 469 |
| MroI | TCCGGA | 1 cut(s) | 825 |
| MscI | TGGCCA | 1 cut(s) | 469 |
| MslI | CAYNNNNRTG | 2 cut(s) | 132, 878 |
| Msp20I | TGGCCA | 1 cut(s) | 469 |
| MspA1I | CMGCKG | 1 cut(s) | 886 |
| MspI | CCGG | 9 cut(s) | 517, 703, 713, 723, 795, 826, 1218, 1238, 1310 |
| MspR9I | CCNGG | 8 cut(s) | 424, 466, 471, 517, 713, 1238, 1310, 1440 |
| MvaI | CCWGG | 4 cut(s) | 424, 466, 471, 1440 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1120, 1227, 1523 |
| NciI | CCSGG | 4 cut(s) | 517, 713, 1238, 1310 |
| NdeII | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| NlaIII | CATG | 8 cut(s) | 142, 149, 363, 409, 512, 1060, 1348, 1366 |
| NlaIV | GGNNCC | 5 cut(s) | 871, 943, 1015, 1231, 1325 |
| NmuCI | GTSAC | 1 cut(s) | 777 |
| NspI | RCATGY | 1 cut(s) | 1366 |
| PagI | TCATGA | 1 cut(s) | 138 |
| PaqCI | CACCTGC | 1 cut(s) | 1531 |
| PceI | AGGCCT | 1 cut(s) | 912 |
| PciI | ACATGT | 1 cut(s) | 1362 |
| PfeI | GAWTC | 6 cut(s) | 373, 401, 474, 1214, 1241, 1348 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 58 |
| PfoI | TCCNGGA | 1 cut(s) | 1236 |
| PkrI | GCNGC | 4 cut(s) | 233, 693, 885, 1281 |
| PleI | GAGTC | 1 cut(s) | 136 |
| PpsI | GAGTC | 1 cut(s) | 136 |
| Ppu21I | YACGTR | 1 cut(s) | 164 |
| PscI | ACATGT | 1 cut(s) | 1362 |
| PshBI | ATTAAT | 2 cut(s) | 1775, 1812 |
| Psp6I | CCWGG | 4 cut(s) | 422, 464, 469, 1438 |
| PspFI | CCCAGC | 2 cut(s) | 886, 1251 |
| PspGI | CCWGG | 4 cut(s) | 422, 464, 469, 1438 |
| PspN4I | GGNNCC | 5 cut(s) | 871, 943, 1015, 1231, 1325 |
| PspPI | GGNCC | 4 cut(s) | 705, 725, 797, 1423 |
| PstI | CTGCAG | 1 cut(s) | 1284 |
| PsuI | RGATCY | 1 cut(s) | 765 |
| PvuII | CAGCTG | 1 cut(s) | 886 |
| RseI | CAYNNNNRTG | 2 cut(s) | 132, 878 |
| Rsr2I | CGGWCCG | 1 cut(s) | 797 |
| RsrII | CGGWCCG | 1 cut(s) | 797 |
| SatI | GCNGC | 4 cut(s) | 232, 692, 884, 1280 |
| Sau3AI | GATC | 5 cut(s) | 392, 415, 765, 801, 1507 |
| Sau96I | GGNCC | 4 cut(s) | 705, 725, 797, 1423 |
| SchI | GAGTC | 1 cut(s) | 136 |
| ScrFI | CCNGG | 8 cut(s) | 424, 466, 471, 517, 713, 1238, 1310, 1440 |
| SduI | GDGCHC | 3 cut(s) | 864, 1232, 1271 |
| SfaNI | GCATC | 1 cut(s) | 677 |
| SfcI | CTRYAG | 1 cut(s) | 1280 |
| SinI | GGWCC | 3 cut(s) | 705, 797, 1423 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 132, 878 |
| SmlI | CTYRAG | 6 cut(s) | 752, 761, 1256, 1400, 1545, 1845 |
| SmoI | CTYRAG | 6 cut(s) | 752, 761, 1256, 1400, 1545, 1845 |
| SseBI | AGGCCT | 1 cut(s) | 912 |
| SsiI | CCGC | 4 cut(s) | 347, 502, 787, 1497 |
| SspI | AATATT | 1 cut(s) | 1652 |
| SspMI | CTAG | 3 cut(s) | 92, 228, 521 |
| StuI | AGGCCT | 1 cut(s) | 912 |
| StyD4I | CCNGG | 8 cut(s) | 422, 464, 469, 515, 711, 1236, 1308, 1438 |
| StyI | CCWWGG | 1 cut(s) | 907 |
| TaaI | ACNGT | 2 cut(s) | 958, 1472 |
| TaiI | ACGT | 1 cut(s) | 166 |
| TaqI | TCGA | 3 cut(s) | 395, 477, 1032 |
| TfiI | GAWTC | 6 cut(s) | 373, 401, 474, 1214, 1241, 1348 |
| TscAI | CASTG | 2 cut(s) | 1435, 1510 |
| TseFI | GTSAC | 1 cut(s) | 777 |
| TseI | GCWGC | 4 cut(s) | 231, 691, 883, 1279 |
| Tsp45I | GTSAC | 1 cut(s) | 777 |
| TspDTI | ATGAA | 4 cut(s) | 45, 1045, 1120, 1361 |
| TspGWI | ACGGA | 3 cut(s) | 673, 1724, 1781 |
| TspRI | CASTG | 2 cut(s) | 1435, 1510 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 58 |
| VpaK11BI | GGWCC | 3 cut(s) | 705, 797, 1423 |
| VspI | ATTAAT | 2 cut(s) | 1775, 1812 |
| XapI | RAATTY | 9 cut(s) | 41, 121, 741, 1088, 1261, 1540, 1671, 1757, 1828 |
| XbaI | TCTAGA | 1 cut(s) | 91 |
| XceI | RCATGY | 1 cut(s) | 1366 |
| XspI | CTAG | 3 cut(s) | 92, 228, 521 |