Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0008874

Physical Location & Seq

Genomic Coordinates Forward (+)

27452117 .. 27459131

Gene Structure 7015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1226300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGGCGTGTTGTCAGTGCCATGTGGACCCCGCACCGAATCCTTTAAAATCTCCCAAACAGCGCCAAACCCAAAACCCTTCCCTTCTCTCTCTTGGAGGAAAAGAAAAGAGAGAAAAAGAAAGAGACCGGAAAGAAGAACGATCCCCTCCTAATCTCTCTCCCTCCCTCTGGGCACGGATCAGTGAACGGTGTGTGATGGCAAATGATAAGTTGAAACATGAACGAGAGCCCCTTGGCTCTACTTCACCATTACAAAGGATCAAAGAAAGTGAAATCTCGGTTCAAAGTAATGAACCTAATGATGTGTCTAACTTCGTGGGGAACCTTAGTAATAGTAGTGCTGCTGGAGCTGATGATATAACCATTCCAAGTATGACGATGCCGTTTTCACTTTTTCCTTTTGAAGACATTGATGGAACGAATAACCCTTATGCCATGGAAATGCCGCTGACTGATATTAATTGGATGACTGATCTCACTCTACCATTCAGCAACCCTCAGGATCCAATGTTTGACTATGATTCTGTATATGGGAAGGGTAGAAAACCGGTCCAACATAGGTCAGATTCAAATTTTATCGGTTTGGATGTGAAGCAAACTCATCGTCCTCTTGATTATTCAATGCCTCCTGCTAAAGTGGTCAGTGCTATGTTTGATGCGGACGTTAAACCTCCTGTTGACAGGAAATTAGTAACTGCTAATGGAAACTTTGCTGCAGCCTTATATGGTATACATCAGAATGAAGAACTAAATAGAAATATAGGCAGGCCTCAGCTATTTAGAAATTTCATAAGCGATGGAGTTAGCACCCCTGTGGCAGGCCATACCATAGATGGCTTAGGCATGGCAAAAAATAACAATTTCATGACAACCAAAGTTCAAGAGGATTGCCCAGAAAACCTTGATGTGAGTTTCCTAACCCTGGGGTTTGAGCGGAAGACTGAGGATTTATCTAAATCTAATAGATCAGAAACAAATGTTGCTAATAATTTTGGAAGGGATGCCCTTCCTCAACCAAATACTTTCTATAGTCGAAAAGAAGAAAGAAATTTCTTCAATCCCTCTGATGTAGCTGGTGGTTTGCCTTGTCATCAGAACACTGCCGGTGGATTCAACGGGCTGACAAACAACATGCCACAAGATGACAGCCAACATCATTTTGTTATGCCGGGAAACAGGAATGTTGCTCTTGGAGTTGAAGGGAACTGGGATACAAGATCTGCATATATTGATCCTAGTAACTGTTTTCAGGGTTACCCAGATGTATCTTTAATTCCTGTTGGTAGCAGCTCCGGGCTCCCTGATTCTGGAGAGAGCAGAGCATATGGTTTGCCATCATTTTCTTTTTCGAGTACAAGTACTTGTCCACCTGCATTGGAAACTTCTAGAAACCTCATTGCTGATCCTGGCATGGTTTTTCCTCCTATTGGTGCCACAACAAGCACTTCCCTGCACGATCAGTTTGGGAAGCCTTTCGCAACTAATGAGGTTATTGCTGTAGAAGTTGCTGAAAGAGGCGATGTTCCTGGGAAATTCAGGTTTAGCCAGCTACCTAGTAATTATTGTCAACCTCATGTCGTCGGTGCTGTTCAGCCATCTACAAACCTTTCTAGATCCATGATGACTGGTGAAGAGTTTTTAGTTACCAAATGTAATAGAACTGCACAAGGTTCTAGTGCTTTTGTTGGAACACATCTTAAGAGGGTTGCTGAACAACCGCAAGCGGTGACTGCCAGAGCTCAACTGTTAAAGAGAAGAAGAGCTCAATCTTCTGTCGATCCATCTGCTCCAATGTTGTCCCTAAATGTTTCAACTGTCCCAAATTCATCCAAGGCCTCTTCTTTCACAGTCCCAGATCCTACAGCTCCATCCCTCCCATGGGAAGCGAAAAGTACTACATCACTCTCACCCCTATTGCAGATTTCTCACACTCTCCCAGCCCAAGGAAGAAGTACTCCATTATTTCCACCCCTGTCACAGACTACGTTTGCCCTCCCAACCCCAGTCAGACGTACTGCAGTACTCCCAGCCTTATCCCAGATTGCTTCCTCTCTGCCATCCCGAGTGAAAACTACTAAATTGCATCCGCCTCTATCCTTGACTGCTCCATGTCTCAGACCCAAAGCCAAAACTACTACATCGCACCCGGCCCTATCCCAGAATGCTCCATCTTTCCTACCTCTACCCCAAATTGCTCCTCGACTCGCATCACACCCGACCCAGTCCTGGAATGCTCCCTCTCTCCGACCCCAGGTCCGAATTGTACCCCCACTCCCATCCCAACCTTGGGCTGCTCCACCAGTCCCACAGATATCTCAGAATGCTTCACCACTCCCACCAAAATCTCAGTCTGCTTCATCACTCTCTCCCCAGACTGCTCAACCTCCCCTTCCACCACCCCAGATTGCTCCCTCTCTCCTACCCAAACGCCAGACTGGTCCACCTTCCCCACCCCAACCCCAGACTGCTGCACCCCCTCTTCCACCACAATCCCGGACTGCTTCAGCTGTACATATAAAATGGAAAGGTTTTGGTCAAACTCAACCAAGTGGGCACAAGTGTTTGATATGCAAGAGGGATCTTTCCTTCACACCTGAAGGCCCTGTTTCCATACCAACTATTCAACCAGTTGTTGCTGTTCTACCGTGTGGCCACACATTTCATGACCACTGCTTGCAGCTCATCACCCCTGAAGACCAAGCTAAAAGTCCTCCGTGCATTCCTTGTGCCATCGGTGACAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

915

Amino Acids

98.88

Weight (kDa)

8.63

Isoelectric Point (pI)

60.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008874)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 FvH4_6g28290
malus_domestica	MD11G1112100.v1.1 MD11G1112200.v1.1 MD17G1226300.v1.1
prunus_persica	Prupe.3G103500_v2.0.a1
pyrus_communis	pycom17g22970
rosa_chinensis	RchiOBHm_Chr2g0132351
rosa_laevigata	RLG00000019248
rosa_multiflora	Rmu_co8101556.1_g000001 Rmu_sc0000781.1_g000004 Rmu_sc0002795.1_g000002
rosa_roxburghii	Rroxscaffold_2G00112140
rosa_rugosa	Rorug02G0303800 Rorug02G0303800
rosa_samantha	Rh2AG356900 Rh2BG363400 Rh2CG340300 Rh2DG380000
rosa_wichuraiana	Rw2G029020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1378
Acc36I	ACCTGC	1 cut(s)	1378
AccB1I	GGYRCC	1 cut(s)	1430
AccBSI	CCGCTC	1 cut(s)	934
AccI	GTMKAC	1 cut(s)	730
AciI	CCGC	7 cut(s)	30, 446, 659, 934, 1718, 1724, 2087
AcoI	YGGCCR	1 cut(s)	2650
AcsI	RAATTY	5 cut(s)	571, 784, 1048, 1532, 1822
AcuI	CTGAAG	3 cut(s)	2487, 2616, 2712
AfaI	GTAC	8 cut(s)	1354, 1360, 1894, 1954, 2014, 2022, 2265, 2511
AflII	CTTAAG	1 cut(s)	1697
AgeI	ACCGGT	1 cut(s)	547
AhdI	GACNNNNNGTC	1 cut(s)	2252
AjnI	CCWGG	5 cut(s)	921, 1405, 1525, 2225, 2250
AleI	CACNNNNGTG	1 cut(s)	812
Alw21I	GWGCWC	2 cut(s)	1741, 1765
Alw26I	GTCTC	2 cut(s)	117, 2117
Ama87I	CYCGRG	1 cut(s)	2061
AoxI	GGCC	6 cut(s)	767, 820, 1833, 2148, 2599, 2650
ApeKI	GCWGC	7 cut(s)	341, 713, 716, 1287, 2291, 2468, 2677
ApoI	RAATTY	5 cut(s)	571, 784, 1048, 1532, 1822
ArsI	GACNNNNNNTTYG	4 cut(s)	589, 621, 2333, 2365
AseI	ATTAAT	1 cut(s)	459
AsiGI	ACCGGT	1 cut(s)	547
Asp700I	GAANNNNTTC	1 cut(s)	1472
AspLEI	GCGC	1 cut(s)	63
AspS9I	GGNCC	6 cut(s)	25, 550, 2149, 2254, 2438, 2600
AsuC2I	CCSGG	4 cut(s)	1170, 1294, 2147, 2494
AsuHPI	GGTGA	6 cut(s)	237, 1640, 1738, 1899, 2319, 2677
AvaI	CYCGRG	1 cut(s)	2061
AvaII	GGWCC	4 cut(s)	25, 550, 2254, 2438
AxyI	CCTNAGG	1 cut(s)	498
BaeGI	GKGCMC	2 cut(s)	175, 2556
BalI	TGGCCA	1 cut(s)	2652
BamHI	GGATCC	1 cut(s)	502
BanI	GGYRCC	1 cut(s)	1430
BanII	GRGCYC	4 cut(s)	231, 1299, 1741, 1765
BbsI	GAAGAC	3 cut(s)	411, 944, 2700
Bbv12I	GWGCWC	2 cut(s)	1741, 1765
BbvCI	CCTCAGC	1 cut(s)	771
BbvI	GCAGC	7 cut(s)	328, 700, 728, 1299, 2278, 2455, 2689
BceAI	ACGGC	1 cut(s)	367
BcgI	CGANNNNNNTGC	4 cut(s)	584, 618, 1766, 1800
BciT130I	CCWGG	5 cut(s)	923, 1407, 1527, 2227, 2252
BciVI	GTATCC	1 cut(s)	1204
BcnI	CCSGG	4 cut(s)	1170, 1294, 2147, 2494
BcoDI	GTCTC	2 cut(s)	117, 2117
BfaI	CTAG	5 cut(s)	1236, 1386, 1554, 1611, 1674
BfmI	CTRYAG	5 cut(s)	714, 1027, 1497, 1860, 2016
BfoI	RGCGCY	1 cut(s)	64
BfrI	CTTAAG	1 cut(s)	1697
BfuAI	ACCTGC	1 cut(s)	1378
BfuI	GTATCC	1 cut(s)	1204
BglII	AGATCT	1 cut(s)	1217
BisI	GCNGC	8 cut(s)	342, 446, 714, 717, 1288, 2292, 2469, 2678
BlsI	GCNGC	8 cut(s)	343, 447, 715, 718, 1289, 2293, 2470, 2679
BmcAI	AGTACT	4 cut(s)	1360, 1894, 1954, 2022
Bme1390I	CCNGG	9 cut(s)	923, 1170, 1294, 1407, 1527, 2147, 2227, 2252, 2494
Bme18I	GGWCC	4 cut(s)	25, 550, 2254, 2438
BmeRI	GACNNNNNGTC	1 cut(s)	2252
BmeT110I	CYCGRG	1 cut(s)	2061
BmgT120I	GGNCC	6 cut(s)	25, 550, 2149, 2254, 2438, 2600
BmiI	GGNNCC	5 cut(s)	27, 323, 504, 1298, 1432
BmrFI	CCNGG	9 cut(s)	923, 1170, 1294, 1407, 1527, 2147, 2227, 2252, 2494
BmrI	ACTGGG	3 cut(s)	1216, 1997, 2215
BmsI	GCATC	5 cut(s)	369, 646, 991, 2092, 2216
BmuI	ACTGGG	3 cut(s)	1216, 1997, 2215
BpiI	GAAGAC	3 cut(s)	411, 944, 2700
BpmI	CTGGAG	2 cut(s)	366, 1329
Bpu10I	CCTNAGC	2 cut(s)	771, 838
BpuMI	CCSGG	4 cut(s)	1170, 1294, 2147, 2494
BsaI	GGTCTC	1 cut(s)	117
BsaWI	WCCGGW	2 cut(s)	126, 547
BsaXI	ACNNNNNCTCC	2 cut(s)	2256, 2286
Bse118I	RCCGGY	2 cut(s)	547, 1103
Bse1I	ACTGG	7 cut(s)	1211, 1630, 2003, 2221, 2300, 2440, 2627
Bse21I	CCTNAGG	1 cut(s)	498
Bse3DI	GCAATG	1 cut(s)	1395
BseBI	CCWGG	5 cut(s)	923, 1407, 1527, 2227, 2252
BseGI	GGATG	8 cut(s)	471, 592, 1006, 1826, 1868, 2057, 2083, 2276
BseMI	GCAATG	1 cut(s)	1395
BseMII	CTCAG	6 cut(s)	512, 785, 933, 2128, 2330, 2360
BseNI	ACTGG	7 cut(s)	1211, 1630, 2003, 2221, 2300, 2440, 2627
BseRI	GAGGAG	1 cut(s)	2187
BseSI	GKGCMC	2 cut(s)	175, 2556
BseXI	GCAGC	7 cut(s)	328, 700, 728, 1299, 2278, 2455, 2689
BseYI	CCCAGC	2 cut(s)	1936, 2026
BsgI	GTGCAG	3 cut(s)	1436, 1647, 2454
BshFI	GGCC	6 cut(s)	769, 822, 1835, 2150, 2601, 2652
BshNI	GGYRCC	1 cut(s)	1430
BshTI	ACCGGT	1 cut(s)	547
BsiHKAI	GWGCWC	2 cut(s)	1741, 1765
BsiHKCI	CYCGRG	1 cut(s)	2061
BsiSI	CCGG	7 cut(s)	127, 548, 1104, 1169, 1293, 2147, 2494
BslFI	GGGAC	4 cut(s)	1783, 1802, 1835, 2288
BsmAI	GTCTC	2 cut(s)	117, 2117
BsmFI	GGGAC	4 cut(s)	1783, 1802, 1835, 2288
BsmI	GAATGC	4 cut(s)	2167, 2236, 2326, 2718
BsnI	GGCC	6 cut(s)	769, 822, 1835, 2150, 2601, 2652
Bso31I	GGTCTC	1 cut(s)	117
BsoBI	CYCGRG	1 cut(s)	2061
Bsp1286I	GDGCHC	6 cut(s)	175, 231, 1299, 1741, 1765, 2556
Bsp1407I	TGTACA	1 cut(s)	2509
Bsp19I	CCATGG	2 cut(s)	435, 1877
BspACI	CCGC	7 cut(s)	30, 446, 659, 934, 1718, 1724, 2087
BspANI	GGCC	6 cut(s)	769, 822, 1835, 2150, 2601, 2652
BspCNI	CTCAG	6 cut(s)	511, 784, 934, 2127, 2329, 2359
BspHI	TCATGA	2 cut(s)	864, 2662
BspLI	GGNNCC	5 cut(s)	27, 323, 504, 1298, 1432
BspMAI	CTGCAG	2 cut(s)	718, 2020
BspMI	ACCTGC	1 cut(s)	1378
BspQI	GCTCTTC	1 cut(s)	1753
BspT107I	GGYRCC	1 cut(s)	1430
BspTI	CTTAAG	1 cut(s)	1697
BspTNI	GGTCTC	1 cut(s)	117
BsrBI	CCGCTC	1 cut(s)	934
BsrDI	GCAATG	1 cut(s)	1395
BsrFI	RCCGGY	2 cut(s)	547, 1103
BsrGI	TGTACA	1 cut(s)	2509
BsrI	ACTGG	7 cut(s)	1211, 1630, 2003, 2221, 2300, 2440, 2627
BssAI	RCCGGY	2 cut(s)	547, 1103
BssNAI	GTATAC	1 cut(s)	731
BssT1I	CCWWGG	6 cut(s)	232, 435, 1830, 1877, 1942, 2285
Bst1107I	GTATAC	1 cut(s)	731
Bst2UI	CCWGG	5 cut(s)	923, 1407, 1527, 2227, 2252
Bst4CI	ACNGT	7 cut(s)	189, 1244, 1746, 1816, 1849, 2646, 2741
Bst6I	CTCTTC	4 cut(s)	1626, 1753, 1843, 2484
BstAFI	CTTAAG	1 cut(s)	1697
BstAUI	TGTACA	1 cut(s)	2509
BstC8I	GCNNGC	5 cut(s)	767, 820, 1547, 1722, 2675
BstDEI	CTNAG	8 cut(s)	326, 498, 771, 838, 942, 2114, 2316, 2346
BstDSI	CCRYGG	2 cut(s)	435, 1877
BstEII	GGTNACC	1 cut(s)	1253
BstENI	CCTNNNNNAGG	1 cut(s)	816
BstF5I	GGATG	8 cut(s)	471, 592, 1006, 1826, 1868, 2057, 2083, 2276
BstH2I	RGCGCY	1 cut(s)	64
BstHHI	GCGC	1 cut(s)	63
BstMAI	GTCTC	2 cut(s)	117, 2117
BstMWI	GCNNNNNNNGC	2 cut(s)	347, 1730
BstNI	CCWGG	5 cut(s)	923, 1407, 1527, 2227, 2252
BstNSI	RCATGY	1 cut(s)	1135
BstPI	GGTNACC	1 cut(s)	1253
BstSCI	CCNGG	9 cut(s)	921, 1168, 1292, 1405, 1525, 2145, 2225, 2250, 2492
BstSFI	CTRYAG	5 cut(s)	714, 1027, 1497, 1860, 2016
BstSLI	GKGCMC	2 cut(s)	175, 2556
BstV1I	GCAGC	7 cut(s)	328, 700, 728, 1299, 2278, 2455, 2689
BstV2I	GAAGAC	3 cut(s)	411, 944, 2700
BstX2I	RGATCY	5 cut(s)	502, 1217, 1613, 1855, 2578
BstYI	RGATCY	5 cut(s)	502, 1217, 1613, 1855, 2578
BstZ17I	GTATAC	1 cut(s)	731
Bsu36I	CCTNAGG	1 cut(s)	498
BsuI	GTATCC	1 cut(s)	1204
BsuRI	GGCC	6 cut(s)	769, 822, 1835, 2150, 2601, 2652
BtgI	CCRYGG	2 cut(s)	435, 1877
BtgZI	GCGATG	3 cut(s)	810, 1533, 2124
BtsCI	GGATG	8 cut(s)	471, 592, 1006, 1826, 1868, 2057, 2083, 2276
BtsI	GCAGTG	2 cut(s)	1098, 2668
BtsIMutI	CAGTG	5 cut(s)	20, 187, 649, 1098, 2668
BveI	ACCTGC	1 cut(s)	1378
Cac8I	GCNNGC	5 cut(s)	767, 820, 1547, 1722, 2675
CciI	TCATGA	2 cut(s)	864, 2662
CfoI	GCGC	1 cut(s)	63
Cfr10I	RCCGGY	2 cut(s)	547, 1103
Cfr13I	GGNCC	6 cut(s)	25, 550, 2149, 2254, 2438, 2600
Csp6I	GTAC	8 cut(s)	1353, 1359, 1893, 1953, 2013, 2021, 2264, 2510
CspAI	ACCGGT	1 cut(s)	547
CspCI	CAANNNNNGTGG	2 cut(s)	1356, 1391
CviQI	GTAC	8 cut(s)	1353, 1359, 1893, 1953, 2013, 2021, 2264, 2510
DdeI	CTNAG	8 cut(s)	326, 498, 771, 838, 942, 2114, 2316, 2346
DraI	TTTAAA	1 cut(s)	45
DriI	GACNNNNNGTC	1 cut(s)	2252
EaeI	YGGCCR	1 cut(s)	2650
Eam1104I	CTCTTC	4 cut(s)	1626, 1753, 1843, 2484
Eam1105I	GACNNNNNGTC	1 cut(s)	2252
EarI	CTCTTC	4 cut(s)	1626, 1753, 1843, 2484
EciI	GGCGGA	1 cut(s)	2076
Ecl136II	GAGCTC	2 cut(s)	1739, 1763
Eco130I	CCWWGG	6 cut(s)	232, 435, 1830, 1877, 1942, 2285
Eco147I	AGGCCT	2 cut(s)	769, 1835
Eco24I	GRGCYC	4 cut(s)	231, 1299, 1741, 1765
Eco31I	GGTCTC	1 cut(s)	117
Eco32I	GATATC	1 cut(s)	2313
Eco47I	GGWCC	4 cut(s)	25, 550, 2254, 2438
Eco53kI	GAGCTC	2 cut(s)	1739, 1763
Eco57I	CTGAAG	3 cut(s)	2487, 2616, 2712
Eco81I	CCTNAGG	1 cut(s)	498
Eco88I	CYCGRG	1 cut(s)	2061
Eco91I	GGTNACC	1 cut(s)	1253
EcoICRI	GAGCTC	2 cut(s)	1739, 1763
EcoNI	CCTNNNNNAGG	1 cut(s)	816
EcoO109I	RGGNCCY	1 cut(s)	2600
EcoO65I	GGTNACC	1 cut(s)	1253
EcoRII	CCWGG	5 cut(s)	921, 1405, 1525, 2225, 2250
EcoRV	GATATC	1 cut(s)	2313
EcoT14I	CCWWGG	6 cut(s)	232, 435, 1830, 1877, 1942, 2285
EcoT38I	GRGCYC	4 cut(s)	231, 1299, 1741, 1765
ErhI	CCWWGG	6 cut(s)	232, 435, 1830, 1877, 1942, 2285
FaqI	GGGAC	4 cut(s)	1783, 1802, 1835, 2288
FauI	CCCGC	1 cut(s)	37
FauNDI	CATATG	1 cut(s)	1324
FblI	GTMKAC	1 cut(s)	730
Fnu4HI	GCNGC	8 cut(s)	342, 446, 714, 717, 1288, 2292, 2469, 2678
FokI	GGATG	8 cut(s)	478, 599, 1013, 1813, 1855, 2044, 2070, 2263
FriOI	GRGCYC	4 cut(s)	231, 1299, 1741, 1765
Fsp4HI	GCNGC	8 cut(s)	342, 446, 714, 717, 1288, 2292, 2469, 2678
FspBI	CTAG	5 cut(s)	1236, 1386, 1554, 1611, 1674
GlaI	GCGC	1 cut(s)	62
GluI	GCNGC	8 cut(s)	342, 446, 714, 717, 1288, 2292, 2469, 2678
GsaI	CCCAGC	2 cut(s)	1940, 2030
GsuI	CTGGAG	2 cut(s)	366, 1329
HaeII	RGCGCY	1 cut(s)	64
HaeIII	GGCC	6 cut(s)	769, 822, 1835, 2150, 2601, 2652
HapII	CCGG	7 cut(s)	127, 548, 1104, 1169, 1293, 2147, 2494
HhaI	GCGC	1 cut(s)	63
Hin6I	GCGC	1 cut(s)	61
HinP1I	GCGC	1 cut(s)	61
HincII	GTYRAC	2 cut(s)	679, 1568
HindII	GTYRAC	2 cut(s)	679, 1568
HinfI	GANTC	6 cut(s)	37, 521, 566, 1110, 1304, 2202
HpaII	CCGG	7 cut(s)	127, 548, 1104, 1169, 1293, 2147, 2494
HphI	GGTGA	6 cut(s)	237, 1640, 1738, 1899, 2319, 2677
Hpy166II	GTNNAC	7 cut(s)	25, 185, 679, 731, 1367, 1568, 2441
Hpy188III	TCNNGA	9 cut(s)	500, 611, 865, 881, 1308, 1386, 1611, 2061, 2663
Hpy8I	GTNNAC	7 cut(s)	25, 185, 679, 731, 1367, 1568, 2441
Hpy99I	CGWCG	1 cut(s)	1583
HpyCH4III	ACNGT	7 cut(s)	189, 1244, 1746, 1816, 1849, 2646, 2741
HpyCH4IV	ACGT	3 cut(s)	663, 1985, 2011
HpyF10VI	GCNNNNNNNGC	2 cut(s)	347, 1730
HpyF3I	CTNAG	8 cut(s)	326, 498, 771, 838, 942, 2114, 2316, 2346
HpySE526I	ACGT	3 cut(s)	663, 1985, 2011
HspAI	GCGC	1 cut(s)	61
LguI	GCTCTTC	1 cut(s)	1753
Lsp1109I	GCAGC	7 cut(s)	328, 700, 728, 1299, 2278, 2455, 2689
LweI	GCATC	5 cut(s)	369, 646, 991, 2092, 2216
MaeI	CTAG	5 cut(s)	1236, 1386, 1554, 1611, 1674
MaeII	ACGT	3 cut(s)	663, 1985, 2011
MaeIII	GTNAC	7 cut(s)	691, 1238, 1253, 1642, 1726, 1974, 2735
MbiI	CCGCTC	1 cut(s)	934
MflI	RGATCY	5 cut(s)	502, 1217, 1613, 1855, 2578
MhlI	GDGCHC	6 cut(s)	175, 231, 1299, 1741, 1765, 2556
MlsI	TGGCCA	1 cut(s)	2652
MluNI	TGGCCA	1 cut(s)	2652
MlyI	GAGTC	1 cut(s)	2196
MmeI	TCCRAC	3 cut(s)	577, 1666, 2269
Mox20I	TGGCCA	1 cut(s)	2652
MroXI	GAANNNNTTC	1 cut(s)	1472
MscI	TGGCCA	1 cut(s)	2652
MseI	TTAA	6 cut(s)	44, 459, 666, 1271, 1698, 1748
MslI	CAYNNNNRTG	3 cut(s)	440, 738, 812
Msp20I	TGGCCA	1 cut(s)	2652
MspA1I	CMGCKG	2 cut(s)	448, 2507
MspCI	CTTAAG	1 cut(s)	1697
MspI	CCGG	7 cut(s)	127, 548, 1104, 1169, 1293, 2147, 2494
MspR9I	CCNGG	9 cut(s)	923, 1170, 1294, 1407, 1527, 2147, 2227, 2252, 2494
Mva1269I	GAATGC	4 cut(s)	2167, 2236, 2326, 2718
MvaI	CCWGG	5 cut(s)	923, 1407, 1527, 2227, 2252
MwoI	GCNNNNNNNGC	2 cut(s)	347, 1730
NciI	CCSGG	4 cut(s)	1170, 1294, 2147, 2494
NcoI	CCATGG	2 cut(s)	435, 1877
NdeI	CATATG	1 cut(s)	1324
NlaIV	GGNNCC	5 cut(s)	27, 323, 504, 1298, 1432
NmuCI	GTSAC	3 cut(s)	1726, 1974, 2735
NspI	RCATGY	1 cut(s)	1135
OliI	CACNNNNGTG	1 cut(s)	812
PagI	TCATGA	2 cut(s)	864, 2662
PaqCI	CACCTGC	1 cut(s)	1378
PasI	CCCWGGG	1 cut(s)	922
PceI	AGGCCT	2 cut(s)	769, 1835
PciSI	GCTCTTC	1 cut(s)	1753
PctI	GAATGC	4 cut(s)	2167, 2236, 2326, 2718
PdmI	GAANNNNTTC	1 cut(s)	1472
PfeI	GAWTC	5 cut(s)	37, 521, 566, 1110, 1304
PflFI	GACNNNGTC	1 cut(s)	2221
PfoI	TCCNGGA	2 cut(s)	2225, 2492
PinAI	ACCGGT	1 cut(s)	547
PkrI	GCNGC	8 cut(s)	343, 447, 715, 718, 1289, 2293, 2470, 2679
PleI	GAGTC	1 cut(s)	2196
PpsI	GAGTC	1 cut(s)	2196
PshBI	ATTAAT	1 cut(s)	459
Psp124BI	GAGCTC	2 cut(s)	1741, 1765
Psp6I	CCWGG	5 cut(s)	921, 1405, 1525, 2225, 2250
PspEI	GGTNACC	1 cut(s)	1253
PspFI	CCCAGC	2 cut(s)	1936, 2026
PspGI	CCWGG	5 cut(s)	921, 1405, 1525, 2225, 2250
PspN4I	GGNNCC	5 cut(s)	27, 323, 504, 1298, 1432
PspPI	GGNCC	6 cut(s)	25, 550, 2149, 2254, 2438, 2600
PstI	CTGCAG	2 cut(s)	718, 2020
PsuI	RGATCY	5 cut(s)	502, 1217, 1613, 1855, 2578
PsyI	GACNNNGTC	1 cut(s)	2221
PvuII	CAGCTG	1 cut(s)	2507
RsaI	GTAC	8 cut(s)	1354, 1360, 1894, 1954, 2014, 2022, 2265, 2511
RsaNI	GTAC	8 cut(s)	1353, 1359, 1893, 1953, 2013, 2021, 2264, 2510
RseI	CAYNNNNRTG	3 cut(s)	440, 738, 812
SacI	GAGCTC	2 cut(s)	1741, 1765
SapI	GCTCTTC	1 cut(s)	1753
SaqAI	TTAA	6 cut(s)	44, 459, 666, 1271, 1698, 1748
SatI	GCNGC	8 cut(s)	342, 446, 714, 717, 1288, 2292, 2469, 2678
Sau96I	GGNCC	6 cut(s)	25, 550, 2149, 2254, 2438, 2600
ScaI	AGTACT	4 cut(s)	1360, 1894, 1954, 2022
SchI	GAGTC	1 cut(s)	2196
ScrFI	CCNGG	9 cut(s)	923, 1170, 1294, 1407, 1527, 2147, 2227, 2252, 2494
SduI	GDGCHC	6 cut(s)	175, 231, 1299, 1741, 1765, 2556
SfaNI	GCATC	5 cut(s)	369, 646, 991, 2092, 2216
SfcI	CTRYAG	5 cut(s)	714, 1027, 1497, 1860, 2016
SinI	GGWCC	4 cut(s)	25, 550, 2254, 2438
SmiMI	CAYNNNNRTG	3 cut(s)	440, 738, 812
SmlI	CTYRAG	1 cut(s)	1697
SmoI	CTYRAG	1 cut(s)	1697
SseBI	AGGCCT	2 cut(s)	769, 1835
SsiI	CCGC	7 cut(s)	30, 446, 659, 934, 1718, 1724, 2087
SspMI	CTAG	5 cut(s)	1236, 1386, 1554, 1611, 1674
SstI	GAGCTC	2 cut(s)	1741, 1765
StuI	AGGCCT	2 cut(s)	769, 1835
StyD4I	CCNGG	9 cut(s)	921, 1168, 1292, 1405, 1525, 2145, 2225, 2250, 2492
StyI	CCWWGG	6 cut(s)	232, 435, 1830, 1877, 1942, 2285
TaaI	ACNGT	7 cut(s)	189, 1244, 1746, 1816, 1849, 2646, 2741
TaiI	ACGT	3 cut(s)	666, 1988, 2014
TaqI	TCGA	4 cut(s)	1033, 1349, 1776, 2200
TatI	WGTACW	6 cut(s)	1352, 1358, 1892, 1952, 2020, 2509
TauI	GCSGC	1 cut(s)	448
TfiI	GAWTC	5 cut(s)	37, 521, 566, 1110, 1304
Tru1I	TTAA	6 cut(s)	44, 459, 666, 1271, 1698, 1748
Tru9I	TTAA	6 cut(s)	44, 459, 666, 1271, 1698, 1748
TscAI	CASTG	5 cut(s)	20, 187, 649, 1105, 2675
TseFI	GTSAC	3 cut(s)	1726, 1974, 2735
TseI	GCWGC	7 cut(s)	341, 713, 716, 1287, 2291, 2468, 2677
Tsp45I	GTSAC	3 cut(s)	1726, 1974, 2735
TspDTI	ATGAA	8 cut(s)	234, 306, 756, 778, 853, 1815, 2346, 2651
TspGWI	ACGGA	2 cut(s)	190, 2703
TspRI	CASTG	5 cut(s)	20, 187, 649, 1105, 2675
Tth111I	GACNNNGTC	1 cut(s)	2221
Vha464I	CTTAAG	1 cut(s)	1697
VpaK11BI	GGWCC	4 cut(s)	25, 550, 2254, 2438
VspI	ATTAAT	1 cut(s)	459
XagI	CCTNNNNNAGG	1 cut(s)	816
XapI	RAATTY	5 cut(s)	571, 784, 1048, 1532, 1822
XbaI	TCTAGA	2 cut(s)	1385, 1610
XceI	RCATGY	1 cut(s)	1135
XcmI	CCANNNNNNNNNTGG	3 cut(s)	830, 1875, 2283
XmiI	GTMKAC	1 cut(s)	730
XmnI	GAANNNNTTC	1 cut(s)	1472
XspI	CTAG	5 cut(s)	1236, 1386, 1554, 1611, 1674
ZrmI	AGTACT	4 cut(s)	1360, 1894, 1954, 2022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.