Ring finger
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 |
| malus_domestica | MD11G1112100.v1.1 MD11G1112200.v1.1 MD17G1226300.v1.1 |
| prunus_persica | Prupe.3G103500_v2.0.a1 |
| pyrus_communis | pycom17g22970 |
| rosa_chinensis | RchiOBHm_Chr2g0132351 |
| rosa_laevigata | RLG00000019248 |
| rosa_multiflora | Rmu_co8101556.1_g000001 Rmu_sc0000781.1_g000004 Rmu_sc0002795.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00112140 |
| rosa_rugosa | Rorug02G0303800 Rorug02G0303800 |
| rosa_samantha | Rh2AG356900 Rh2BG363400 Rh2CG340300 Rh2DG380000 |
| rosa_wichuraiana | Rw2G029020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 1156, 2140 |
| AciI | CCGC | 6 cut(s) | 98, 221, 937, 1832, 1929, 2264 |
| AclWI | GGATC | 7 cut(s) | 112, 212, 1013, 1387, 1631, 2645, 2736 |
| AcoI | YGGCCR | 2 cut(s) | 2398, 2800 |
| AcsI | RAATTY | 3 cut(s) | 1298, 1530, 2501 |
| AcuI | CTGAAG | 2 cut(s) | 903, 1359 |
| AfaI | GTAC | 7 cut(s) | 61, 184, 1150, 1624, 2020, 2308, 2658 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1777, 1818, 1863 |
| AgeI | ACCGGT | 2 cut(s) | 1391, 1670 |
| AgsI | TTSAA | 6 cut(s) | 131, 140, 450, 500, 986, 1433 |
| AjnI | CCWGG | 7 cut(s) | 100, 244, 1375, 1695, 1725, 1817, 2468 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 388, 420 |
| Alw21I | GWGCWC | 2 cut(s) | 1903, 2512 |
| Alw26I | GTCTC | 2 cut(s) | 1853, 2478 |
| AlwI | GGATC | 7 cut(s) | 112, 212, 1013, 1387, 1631, 2645, 2736 |
| AoxI | GGCC | 6 cut(s) | 167, 599, 1779, 2398, 2749, 2800 |
| ApoI | RAATTY | 3 cut(s) | 1298, 1530, 2501 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 62, 94 |
| AsiGI | ACCGGT | 2 cut(s) | 1391, 1670 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1238, 1530 |
| AspS9I | GGNCC | 5 cut(s) | 167, 654, 718, 2339, 2750 |
| AsuC2I | CCSGG | 4 cut(s) | 957, 1231, 1864, 2840 |
| AsuHPI | GGTGA | 8 cut(s) | 638, 1123, 1535, 1983, 2293, 2307, 2574, 2827 |
| AsuNHI | GCTAGC | 1 cut(s) | 1315 |
| AvaII | GGWCC | 3 cut(s) | 654, 718, 2339 |
| BaeGI | GKGCMC | 1 cut(s) | 2706 |
| BalI | TGGCCA | 1 cut(s) | 2802 |
| BbsI | GAAGAC | 1 cut(s) | 96 |
| Bbv12I | GWGCWC | 2 cut(s) | 1903, 2512 |
| BbvCI | CCTCAGC | 2 cut(s) | 603, 2355 |
| BceAI | ACGGC | 3 cut(s) | 1108, 2235, 2764 |
| BciT130I | CCWGG | 7 cut(s) | 102, 246, 1377, 1697, 1727, 1819, 2470 |
| BcnI | CCSGG | 4 cut(s) | 957, 1231, 1864, 2840 |
| BcoDI | GTCTC | 2 cut(s) | 1853, 2478 |
| BfaI | CTAG | 5 cut(s) | 224, 1079, 1316, 1320, 1440 |
| BfmI | CTRYAG | 2 cut(s) | 546, 1680 |
| BglII | AGATCT | 1 cut(s) | 1004 |
| BlpI | GCTNAGC | 1 cut(s) | 276 |
| BmcAI | AGTACT | 5 cut(s) | 184, 1150, 2020, 2308, 2658 |
| Bme18I | GGWCC | 3 cut(s) | 654, 718, 2339 |
| BmgT120I | GGNCC | 5 cut(s) | 167, 654, 718, 2339, 2750 |
| BmiI | GGNNCC | 3 cut(s) | 168, 2283, 2341 |
| BmrI | ACTGGG | 1 cut(s) | 2543 |
| BmsI | GCATC | 3 cut(s) | 755, 880, 1720 |
| BmtI | GCTAGC | 1 cut(s) | 1319 |
| BmuI | ACTGGG | 1 cut(s) | 2543 |
| BpiI | GAAGAC | 1 cut(s) | 96 |
| BpmI | CTGGAG | 1 cut(s) | 760 |
| Bpu10I | CCTNAGC | 2 cut(s) | 603, 2355 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 3 cut(s) | 1726, 2052, 2443 |
| BpuMI | CCSGG | 4 cut(s) | 957, 1231, 1864, 2840 |
| BsaI | GGTCTC | 2 cut(s) | 1853, 2478 |
| BsaJI | CCNNGG | 7 cut(s) | 245, 754, 1725, 2450, 2468, 2555, 2838 |
| BsaWI | WCCGGW | 2 cut(s) | 1391, 1670 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1983, 2013 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1777, 1818, 1863 |
| Bse118I | RCCGGY | 2 cut(s) | 1391, 1670 |
| Bse3DI | GCAATG | 2 cut(s) | 1907, 2818 |
| BseBI | CCWGG | 7 cut(s) | 102, 246, 1377, 1697, 1727, 1819, 2470 |
| BseDI | CCNNGG | 7 cut(s) | 245, 754, 1725, 2450, 2468, 2555, 2838 |
| BseGI | GGATG | 7 cut(s) | 577, 721, 770, 1372, 1735, 1853, 2093 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1777, 1818, 1863 |
| BseMI | GCAATG | 2 cut(s) | 1907, 2818 |
| BseMII | CTCAG | 8 cut(s) | 350, 617, 842, 1094, 1500, 1574, 2369, 2549 |
| BseSI | GKGCMC | 1 cut(s) | 2706 |
| BseYI | CCCAGC | 2 cut(s) | 1045, 1640 |
| BsgI | GTGCAG | 2 cut(s) | 1494, 1623 |
| BshFI | GGCC | 6 cut(s) | 169, 601, 1781, 2400, 2751, 2802 |
| BshTI | ACCGGT | 2 cut(s) | 1391, 1670 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1903, 2512 |
| BsiSI | CCGG | 6 cut(s) | 956, 1230, 1392, 1671, 1864, 2840 |
| BslFI | GGGAC | 3 cut(s) | 262, 332, 2325 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1777, 1818, 1863 |
| BsmAI | GTCTC | 2 cut(s) | 1853, 2478 |
| BsmFI | GGGAC | 3 cut(s) | 262, 332, 2325 |
| BsmI | GAATGC | 3 cut(s) | 1873, 2680, 2868 |
| BsnI | GGCC | 6 cut(s) | 169, 601, 1781, 2400, 2751, 2802 |
| Bso31I | GGTCTC | 2 cut(s) | 1853, 2478 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1903, 2512, 2706 |
| Bsp1407I | TGTACA | 1 cut(s) | 59 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 276 |
| BspACI | CCGC | 6 cut(s) | 98, 221, 937, 1832, 1929, 2264 |
| BspANI | GGCC | 6 cut(s) | 169, 601, 1781, 2400, 2751, 2802 |
| BspCNI | CTCAG | 8 cut(s) | 349, 616, 841, 1095, 1499, 1573, 2368, 2548 |
| BspLI | GGNNCC | 3 cut(s) | 168, 2283, 2341 |
| BspMAI | CTGCAG | 2 cut(s) | 550, 1684 |
| BspOI | GCTAGC | 1 cut(s) | 1319 |
| BspPI | GGATC | 7 cut(s) | 112, 212, 1013, 1387, 1631, 2645, 2736 |
| BspQI | GCTCTTC | 1 cut(s) | 1833 |
| BspTNI | GGTCTC | 2 cut(s) | 1853, 2478 |
| BsrDI | GCAATG | 2 cut(s) | 1907, 2818 |
| BsrFI | RCCGGY | 2 cut(s) | 1391, 1670 |
| BsrGI | TGTACA | 1 cut(s) | 59 |
| BssAI | RCCGGY | 2 cut(s) | 1391, 1670 |
| BssECI | CCNNGG | 7 cut(s) | 245, 754, 1725, 2450, 2468, 2555, 2838 |
| BssNAI | GTATAC | 1 cut(s) | 2141 |
| BssT1I | CCWWGG | 1 cut(s) | 754 |
| Bst1107I | GTATAC | 1 cut(s) | 2141 |
| Bst2UI | CCWGG | 7 cut(s) | 102, 246, 1377, 1697, 1727, 1819, 2470 |
| Bst4CI | ACNGT | 9 cut(s) | 59, 179, 848, 1031, 1164, 1971, 2281, 2493, 2796 |
| Bst6I | CTCTTC | 3 cut(s) | 1833, 2170, 2442 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1271 |
| BstAUI | TGTACA | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 4 cut(s) | 599, 1313, 1317, 2825 |
| BstDSI | CCRYGG | 1 cut(s) | 2555 |
| BstF5I | GGATG | 7 cut(s) | 577, 721, 770, 1372, 1735, 1853, 2093 |
| BstMAI | GTCTC | 2 cut(s) | 1853, 2478 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 220, 1271, 1898, 2718 |
| BstNI | CCWGG | 7 cut(s) | 102, 246, 1377, 1697, 1727, 1819, 2470 |
| BstNSI | RCATGY | 1 cut(s) | 1494 |
| BstSFI | CTRYAG | 2 cut(s) | 546, 1680 |
| BstSLI | GKGCMC | 1 cut(s) | 2706 |
| BstV2I | GAAGAC | 1 cut(s) | 96 |
| BstX2I | RGATCY | 5 cut(s) | 104, 217, 1004, 1379, 2728 |
| BstYI | RGATCY | 5 cut(s) | 104, 217, 1004, 1379, 2728 |
| BstZ17I | GTATAC | 1 cut(s) | 2141 |
| BsuRI | GGCC | 6 cut(s) | 169, 601, 1781, 2400, 2751, 2802 |
| BtgI | CCRYGG | 1 cut(s) | 2555 |
| BtgZI | GCGATG | 2 cut(s) | 1011, 1959 |
| BtsCI | GGATG | 7 cut(s) | 577, 721, 770, 1372, 1735, 1853, 2093 |
| BtsI | GCAGTG | 1 cut(s) | 2405 |
| Cac8I | GCNNGC | 4 cut(s) | 599, 1313, 1317, 2825 |
| Cfr10I | RCCGGY | 2 cut(s) | 1391, 1670 |
| Cfr13I | GGNCC | 5 cut(s) | 167, 654, 718, 2339, 2750 |
| CsiI | ACCWGGT | 1 cut(s) | 1817 |
| Csp6I | GTAC | 7 cut(s) | 60, 183, 1149, 1623, 2019, 2307, 2657 |
| CspAI | ACCGGT | 2 cut(s) | 1391, 1670 |
| CviAII | CATG | 8 cut(s) | 86, 211, 651, 964, 1491, 1631, 2813, 2865 |
| CviQI | GTAC | 7 cut(s) | 60, 183, 1149, 1623, 2019, 2307, 2657 |
| DraI | TTTAAA | 1 cut(s) | 13 |
| EaeI | YGGCCR | 2 cut(s) | 2398, 2800 |
| Eam1104I | CTCTTC | 3 cut(s) | 1833, 2170, 2442 |
| EarI | CTCTTC | 3 cut(s) | 1833, 2170, 2442 |
| EciI | GGCGGA | 1 cut(s) | 1821 |
| Eco130I | CCWWGG | 1 cut(s) | 754 |
| Eco147I | AGGCCT | 1 cut(s) | 601 |
| Eco31I | GGTCTC | 2 cut(s) | 1853, 2478 |
| Eco47I | GGWCC | 3 cut(s) | 654, 718, 2339 |
| Eco57I | CTGAAG | 2 cut(s) | 903, 1359 |
| EcoO109I | RGGNCCY | 1 cut(s) | 167 |
| EcoRI | GAATTC | 1 cut(s) | 1298 |
| EcoRII | CCWGG | 7 cut(s) | 100, 244, 1375, 1695, 1725, 1817, 2468 |
| EcoT14I | CCWWGG | 1 cut(s) | 754 |
| EcoT22I | ATGCAT | 1 cut(s) | 2870 |
| ErhI | CCWWGG | 1 cut(s) | 754 |
| FaeI | CATG | 8 cut(s) | 89, 214, 654, 967, 1494, 1634, 2816, 2868 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1195, 1227 |
| FaqI | GGGAC | 3 cut(s) | 262, 332, 2325 |
| FatI | CATG | 8 cut(s) | 85, 210, 650, 963, 1490, 1630, 2812, 2864 |
| FauI | CCCGC | 2 cut(s) | 105, 2271 |
| FauNDI | CATATG | 1 cut(s) | 1188 |
| FblI | GTMKAC | 2 cut(s) | 1156, 2140 |
| FokI | GGATG | 7 cut(s) | 584, 708, 777, 1359, 1742, 1840, 2080 |
| FspBI | CTAG | 5 cut(s) | 224, 1079, 1316, 1320, 1440 |
| GsaI | CCCAGC | 2 cut(s) | 1049, 1644 |
| GsuI | CTGGAG | 1 cut(s) | 760 |
| HaeIII | GGCC | 6 cut(s) | 169, 601, 1781, 2400, 2751, 2802 |
| HapII | CCGG | 6 cut(s) | 956, 1230, 1392, 1671, 1864, 2840 |
| Hin1II | CATG | 8 cut(s) | 89, 214, 654, 967, 1494, 1634, 2816, 2868 |
| HincII | GTYRAC | 1 cut(s) | 175 |
| HindII | GTYRAC | 1 cut(s) | 175 |
| HinfI | GANTC | 6 cut(s) | 340, 404, 454, 806, 1094, 1193 |
| HpaI | GTTAAC | 1 cut(s) | 175 |
| HpaII | CCGG | 6 cut(s) | 956, 1230, 1392, 1671, 1864, 2840 |
| HphI | GGTGA | 8 cut(s) | 638, 1123, 1535, 1983, 2293, 2307, 2574, 2827 |
| Hpy166II | GTNNAC | 4 cut(s) | 175, 657, 1157, 2141 |
| Hpy188I | TCNGA | 9 cut(s) | 339, 409, 811, 912, 1140, 1168, 1955, 2454, 2538 |
| Hpy188III | TCNNGA | 9 cut(s) | 697, 713, 725, 786, 1098, 1292, 1397, 1748, 2044 |
| Hpy8I | GTNNAC | 4 cut(s) | 175, 657, 1157, 2141 |
| HpyCH4III | ACNGT | 9 cut(s) | 59, 179, 848, 1031, 1164, 1971, 2281, 2493, 2796 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 220, 1271, 1898, 2718 |
| Hsp92II | CATG | 8 cut(s) | 89, 214, 654, 967, 1494, 1634, 2816, 2868 |
| KspAI | GTTAAC | 1 cut(s) | 175 |
| LguI | GCTCTTC | 1 cut(s) | 1833 |
| LmnI | GCTCC | 8 cut(s) | 194, 1693, 1876, 1906, 2116, 2515, 2575, 2626 |
| LweI | GCATC | 3 cut(s) | 755, 880, 1720 |
| MabI | ACCWGGT | 1 cut(s) | 1817 |
| MaeI | CTAG | 5 cut(s) | 224, 1079, 1316, 1320, 1440 |
| MaeIII | GTNAC | 3 cut(s) | 329, 1496, 2602 |
| MflI | RGATCY | 5 cut(s) | 104, 217, 1004, 1379, 2728 |
| MhlI | GDGCHC | 3 cut(s) | 1903, 2512, 2706 |
| MlsI | TGGCCA | 1 cut(s) | 2802 |
| MluNI | TGGCCA | 1 cut(s) | 2802 |
| MmeI | TCCRAC | 5 cut(s) | 172, 1430, 1432, 1561, 1906 |
| Mox20I | TGGCCA | 1 cut(s) | 2802 |
| Mph1103I | ATGCAT | 1 cut(s) | 2870 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1238, 1530 |
| MscI | TGGCCA | 1 cut(s) | 2802 |
| MseI | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1419, 1464, 1593, 2616 |
| MslI | CAYNNNNRTG | 1 cut(s) | 644 |
| Msp20I | TGGCCA | 1 cut(s) | 2802 |
| MspA1I | CMGCKG | 2 cut(s) | 1049, 1478 |
| MspI | CCGG | 6 cut(s) | 956, 1230, 1392, 1671, 1864, 2840 |
| Mva1269I | GAATGC | 3 cut(s) | 1873, 2680, 2868 |
| MvaI | CCWGG | 7 cut(s) | 102, 246, 1377, 1697, 1727, 1819, 2470 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 220, 1271, 1898, 2718 |
| NciI | CCSGG | 4 cut(s) | 957, 1231, 1864, 2840 |
| NdeI | CATATG | 1 cut(s) | 1188 |
| NheI | GCTAGC | 1 cut(s) | 1315 |
| NlaIII | CATG | 8 cut(s) | 89, 214, 654, 967, 1494, 1634, 2816, 2868 |
| NlaIV | GGNNCC | 3 cut(s) | 168, 2283, 2341 |
| NmuCI | GTSAC | 1 cut(s) | 2602 |
| NsiI | ATGCAT | 1 cut(s) | 2870 |
| NspI | RCATGY | 1 cut(s) | 1494 |
| PceI | AGGCCT | 1 cut(s) | 601 |
| PciSI | GCTCTTC | 1 cut(s) | 1833 |
| PctI | GAATGC | 3 cut(s) | 1873, 2680, 2868 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1238, 1530 |
| PfeI | GAWTC | 6 cut(s) | 340, 404, 454, 806, 1094, 1193 |
| PflFI | GACNNNGTC | 1 cut(s) | 1819 |
| PfoI | TCCNGGA | 3 cut(s) | 1229, 1375, 1695 |
| PinAI | ACCGGT | 2 cut(s) | 1391, 1670 |
| Psp6I | CCWGG | 7 cut(s) | 100, 244, 1375, 1695, 1725, 1817, 2468 |
| PspFI | CCCAGC | 2 cut(s) | 1045, 1640 |
| PspGI | CCWGG | 7 cut(s) | 100, 244, 1375, 1695, 1725, 1817, 2468 |
| PspN4I | GGNNCC | 3 cut(s) | 168, 2283, 2341 |
| PspPI | GGNCC | 5 cut(s) | 167, 654, 718, 2339, 2750 |
| PstI | CTGCAG | 2 cut(s) | 550, 1684 |
| PsuI | RGATCY | 5 cut(s) | 104, 217, 1004, 1379, 2728 |
| PsyI | GACNNNGTC | 1 cut(s) | 1819 |
| PvuII | CAGCTG | 2 cut(s) | 1049, 1478 |
| RsaI | GTAC | 7 cut(s) | 61, 184, 1150, 1624, 2020, 2308, 2658 |
| RsaNI | GTAC | 7 cut(s) | 60, 183, 1149, 1623, 2019, 2307, 2657 |
| RseI | CAYNNNNRTG | 1 cut(s) | 644 |
| SapI | GCTCTTC | 1 cut(s) | 1833 |
| SaqAI | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1419, 1464, 1593, 2616 |
| Sau96I | GGNCC | 5 cut(s) | 167, 654, 718, 2339, 2750 |
| ScaI | AGTACT | 5 cut(s) | 184, 1150, 2020, 2308, 2658 |
| SduI | GDGCHC | 3 cut(s) | 1903, 2512, 2706 |
| SexAI | ACCWGGT | 1 cut(s) | 1817 |
| SfaNI | GCATC | 3 cut(s) | 755, 880, 1720 |
| SfcI | CTRYAG | 2 cut(s) | 546, 1680 |
| SinI | GGWCC | 3 cut(s) | 654, 718, 2339 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 644 |
| SmlI | CTYRAG | 3 cut(s) | 1741, 2067, 2422 |
| SmoI | CTYRAG | 3 cut(s) | 1741, 2067, 2422 |
| SseBI | AGGCCT | 1 cut(s) | 601 |
| SsiI | CCGC | 6 cut(s) | 98, 221, 937, 1832, 1929, 2264 |
| SspI | AATATT | 1 cut(s) | 1664 |
| SspMI | CTAG | 5 cut(s) | 224, 1079, 1316, 1320, 1440 |
| StuI | AGGCCT | 1 cut(s) | 601 |
| StyI | CCWWGG | 1 cut(s) | 754 |
| TaaI | ACNGT | 9 cut(s) | 59, 179, 848, 1031, 1164, 1971, 2281, 2493, 2796 |
| TaqI | TCGA | 5 cut(s) | 80, 833, 1568, 1747, 2203 |
| TatI | WGTACW | 6 cut(s) | 59, 182, 1148, 2018, 2306, 2656 |
| TauI | GCSGC | 1 cut(s) | 940 |
| TfiI | GAWTC | 6 cut(s) | 340, 404, 454, 806, 1094, 1193 |
| Tru1I | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1419, 1464, 1593, 2616 |
| Tru9I | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1419, 1464, 1593, 2616 |
| TseFI | GTSAC | 1 cut(s) | 2602 |
| Tsp45I | GTSAC | 1 cut(s) | 2602 |
| TspGWI | ACGGA | 1 cut(s) | 2572 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1819 |
| VpaK11BI | GGWCC | 3 cut(s) | 654, 718, 2339 |
| XapI | RAATTY | 3 cut(s) | 1298, 1530, 2501 |
| XceI | RCATGY | 1 cut(s) | 1494 |
| XmiI | GTMKAC | 2 cut(s) | 1156, 2140 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1238, 1530 |
| XspI | CTAG | 5 cut(s) | 224, 1079, 1316, 1320, 1440 |
| ZrmI | AGTACT | 5 cut(s) | 184, 1150, 2020, 2308, 2658 |
| Zsp2I | ATGCAT | 1 cut(s) | 2870 |