Ring finger
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 FvH4_6g28290 |
| malus_domestica | MD11G1112100.v1.1 MD11G1112200.v1.1 MD17G1226300.v1.1 |
| prunus_persica | Prupe.3G103500_v2.0.a1 |
| pyrus_communis | pycom17g22970 |
| rosa_chinensis | RchiOBHm_Chr2g0132351 |
| rosa_laevigata | RLG00000019248 |
| rosa_multiflora | Rmu_co8101556.1_g000001 Rmu_sc0000781.1_g000004 Rmu_sc0002795.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00112140 |
| rosa_rugosa | Rorug02G0303800 Rorug02G0303800 |
| rosa_samantha | Rh2AG356900 Rh2BG363400 Rh2CG340300 Rh2DG380000 |
| rosa_wichuraiana | Rw2G029020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 2035 |
| AciI | CCGC | 7 cut(s) | 98, 221, 287, 937, 1727, 1824, 2159 |
| AclWI | GGATC | 7 cut(s) | 112, 212, 1013, 1282, 1526, 2540, 2631 |
| AcoI | YGGCCR | 2 cut(s) | 2293, 2695 |
| AcsI | RAATTY | 3 cut(s) | 1210, 1425, 2396 |
| AcuI | CTGAAG | 2 cut(s) | 903, 1254 |
| AfaI | GTAC | 6 cut(s) | 61, 184, 1519, 1915, 2203, 2553 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1672, 1713, 1758 |
| AgeI | ACCGGT | 1 cut(s) | 1286 |
| AgsI | TTSAA | 6 cut(s) | 131, 140, 450, 500, 986, 1328 |
| AjnI | CCWGG | 7 cut(s) | 100, 244, 1270, 1590, 1620, 1712, 2363 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 388, 420 |
| Alw21I | GWGCWC | 2 cut(s) | 1798, 2407 |
| Alw26I | GTCTC | 2 cut(s) | 1748, 2373 |
| AlwI | GGATC | 7 cut(s) | 112, 212, 1013, 1282, 1526, 2540, 2631 |
| AoxI | GGCC | 6 cut(s) | 167, 599, 1674, 2293, 2644, 2695 |
| ApoI | RAATTY | 3 cut(s) | 1210, 1425, 2396 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 62, 94 |
| AsiGI | ACCGGT | 1 cut(s) | 1286 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1150, 1425 |
| AspS9I | GGNCC | 5 cut(s) | 167, 654, 718, 2234, 2645 |
| AsuC2I | CCSGG | 4 cut(s) | 957, 1143, 1759, 2735 |
| AsuHPI | GGTGA | 7 cut(s) | 638, 1430, 1878, 2188, 2202, 2469, 2722 |
| AvaII | GGWCC | 3 cut(s) | 654, 718, 2234 |
| BaeGI | GKGCMC | 1 cut(s) | 2601 |
| BalI | TGGCCA | 1 cut(s) | 2697 |
| BbsI | GAAGAC | 1 cut(s) | 96 |
| Bbv12I | GWGCWC | 2 cut(s) | 1798, 2407 |
| BbvCI | CCTCAGC | 2 cut(s) | 603, 2250 |
| BceAI | ACGGC | 2 cut(s) | 2130, 2659 |
| BciT130I | CCWGG | 7 cut(s) | 102, 246, 1272, 1592, 1622, 1714, 2365 |
| BcnI | CCSGG | 4 cut(s) | 957, 1143, 1759, 2735 |
| BcoDI | GTCTC | 2 cut(s) | 1748, 2373 |
| BfaI | CTAG | 3 cut(s) | 224, 1079, 1335 |
| BfmI | CTRYAG | 2 cut(s) | 546, 1575 |
| BglII | AGATCT | 1 cut(s) | 1004 |
| BlpI | GCTNAGC | 1 cut(s) | 276 |
| BmcAI | AGTACT | 4 cut(s) | 184, 1915, 2203, 2553 |
| Bme18I | GGWCC | 3 cut(s) | 654, 718, 2234 |
| BmgT120I | GGNCC | 5 cut(s) | 167, 654, 718, 2234, 2645 |
| BmiI | GGNNCC | 3 cut(s) | 168, 2178, 2236 |
| BmrI | ACTGGG | 1 cut(s) | 2438 |
| BmsI | GCATC | 3 cut(s) | 755, 880, 1615 |
| BmuI | ACTGGG | 1 cut(s) | 2438 |
| BpiI | GAAGAC | 1 cut(s) | 96 |
| Bpu10I | CCTNAGC | 2 cut(s) | 603, 2250 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 3 cut(s) | 1621, 1947, 2338 |
| BpuMI | CCSGG | 4 cut(s) | 957, 1143, 1759, 2735 |
| BsaI | GGTCTC | 2 cut(s) | 1748, 2373 |
| BsaJI | CCNNGG | 7 cut(s) | 245, 754, 1620, 2345, 2363, 2450, 2733 |
| BsaWI | WCCGGW | 1 cut(s) | 1286 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1878, 1908 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1672, 1713, 1758 |
| Bse118I | RCCGGY | 1 cut(s) | 1286 |
| Bse3DI | GCAATG | 2 cut(s) | 1802, 2713 |
| BseBI | CCWGG | 7 cut(s) | 102, 246, 1272, 1592, 1622, 1714, 2365 |
| BseDI | CCNNGG | 7 cut(s) | 245, 754, 1620, 2345, 2363, 2450, 2733 |
| BseGI | GGATG | 7 cut(s) | 577, 721, 770, 1267, 1630, 1748, 1988 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1672, 1713, 1758 |
| BseMI | GCAATG | 2 cut(s) | 1802, 2713 |
| BseMII | CTCAG | 8 cut(s) | 350, 617, 842, 1094, 1395, 1469, 2264, 2444 |
| BseSI | GKGCMC | 1 cut(s) | 2601 |
| BseYI | CCCAGC | 2 cut(s) | 1045, 1535 |
| BsgI | GTGCAG | 3 cut(s) | 1160, 1389, 1518 |
| BshFI | GGCC | 6 cut(s) | 169, 601, 1676, 2295, 2646, 2697 |
| BshTI | ACCGGT | 1 cut(s) | 1286 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1798, 2407 |
| BsiSI | CCGG | 5 cut(s) | 956, 1142, 1287, 1759, 2735 |
| BslFI | GGGAC | 3 cut(s) | 262, 332, 2220 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 356, 1028, 1097, 1672, 1713, 1758 |
| BsmAI | GTCTC | 2 cut(s) | 1748, 2373 |
| BsmFI | GGGAC | 3 cut(s) | 262, 332, 2220 |
| BsmI | GAATGC | 3 cut(s) | 1768, 2575, 2763 |
| BsnI | GGCC | 6 cut(s) | 169, 601, 1676, 2295, 2646, 2697 |
| Bso31I | GGTCTC | 2 cut(s) | 1748, 2373 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1798, 2407, 2601 |
| Bsp1407I | TGTACA | 1 cut(s) | 59 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 276 |
| BspACI | CCGC | 7 cut(s) | 98, 221, 287, 937, 1727, 1824, 2159 |
| BspANI | GGCC | 6 cut(s) | 169, 601, 1676, 2295, 2646, 2697 |
| BspCNI | CTCAG | 8 cut(s) | 349, 616, 841, 1095, 1394, 1468, 2263, 2443 |
| BspLI | GGNNCC | 3 cut(s) | 168, 2178, 2236 |
| BspMAI | CTGCAG | 2 cut(s) | 550, 1579 |
| BspPI | GGATC | 7 cut(s) | 112, 212, 1013, 1282, 1526, 2540, 2631 |
| BspQI | GCTCTTC | 1 cut(s) | 1728 |
| BspTNI | GGTCTC | 2 cut(s) | 1748, 2373 |
| BsrDI | GCAATG | 2 cut(s) | 1802, 2713 |
| BsrFI | RCCGGY | 1 cut(s) | 1286 |
| BsrGI | TGTACA | 1 cut(s) | 59 |
| BssAI | RCCGGY | 1 cut(s) | 1286 |
| BssECI | CCNNGG | 7 cut(s) | 245, 754, 1620, 2345, 2363, 2450, 2733 |
| BssNAI | GTATAC | 1 cut(s) | 2036 |
| BssT1I | CCWWGG | 1 cut(s) | 754 |
| Bst1107I | GTATAC | 1 cut(s) | 2036 |
| Bst2UI | CCWGG | 7 cut(s) | 102, 246, 1272, 1592, 1622, 1714, 2365 |
| Bst4CI | ACNGT | 8 cut(s) | 59, 179, 848, 1031, 1866, 2176, 2388, 2691 |
| Bst6I | CTCTTC | 3 cut(s) | 1728, 2065, 2337 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1183 |
| BstAUI | TGTACA | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 2 cut(s) | 599, 2720 |
| BstDSI | CCRYGG | 1 cut(s) | 2450 |
| BstF5I | GGATG | 7 cut(s) | 577, 721, 770, 1267, 1630, 1748, 1988 |
| BstMAI | GTCTC | 2 cut(s) | 1748, 2373 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 220, 286, 1183, 1793, 2613 |
| BstNI | CCWGG | 7 cut(s) | 102, 246, 1272, 1592, 1622, 1714, 2365 |
| BstNSI | RCATGY | 1 cut(s) | 1389 |
| BstSFI | CTRYAG | 2 cut(s) | 546, 1575 |
| BstSLI | GKGCMC | 1 cut(s) | 2601 |
| BstV2I | GAAGAC | 1 cut(s) | 96 |
| BstX2I | RGATCY | 5 cut(s) | 104, 217, 1004, 1274, 2623 |
| BstYI | RGATCY | 5 cut(s) | 104, 217, 1004, 1274, 2623 |
| BstZ17I | GTATAC | 1 cut(s) | 2036 |
| BsuRI | GGCC | 6 cut(s) | 169, 601, 1676, 2295, 2646, 2697 |
| BtgI | CCRYGG | 1 cut(s) | 2450 |
| BtgZI | GCGATG | 2 cut(s) | 1011, 1854 |
| BtsCI | GGATG | 7 cut(s) | 577, 721, 770, 1267, 1630, 1748, 1988 |
| BtsI | GCAGTG | 1 cut(s) | 2300 |
| BtsIMutI | CAGTG | 9 cut(s) | 55, 432, 621, 1463, 1563, 1688, 1862, 2300, 2384 |
| Cac8I | GCNNGC | 2 cut(s) | 599, 2720 |
| Cfr10I | RCCGGY | 1 cut(s) | 1286 |
| Cfr13I | GGNCC | 5 cut(s) | 167, 654, 718, 2234, 2645 |
| CsiI | ACCWGGT | 1 cut(s) | 1712 |
| Csp6I | GTAC | 6 cut(s) | 60, 183, 1518, 1914, 2202, 2552 |
| CspAI | ACCGGT | 1 cut(s) | 1286 |
| CviAII | CATG | 8 cut(s) | 86, 211, 651, 964, 1386, 1526, 2708, 2760 |
| CviQI | GTAC | 6 cut(s) | 60, 183, 1518, 1914, 2202, 2552 |
| DraI | TTTAAA | 1 cut(s) | 13 |
| EaeI | YGGCCR | 2 cut(s) | 2293, 2695 |
| Eam1104I | CTCTTC | 3 cut(s) | 1728, 2065, 2337 |
| EarI | CTCTTC | 3 cut(s) | 1728, 2065, 2337 |
| EciI | GGCGGA | 1 cut(s) | 1716 |
| Eco130I | CCWWGG | 1 cut(s) | 754 |
| Eco147I | AGGCCT | 1 cut(s) | 601 |
| Eco31I | GGTCTC | 2 cut(s) | 1748, 2373 |
| Eco47I | GGWCC | 3 cut(s) | 654, 718, 2234 |
| Eco57I | CTGAAG | 2 cut(s) | 903, 1254 |
| EcoO109I | RGGNCCY | 1 cut(s) | 167 |
| EcoRI | GAATTC | 1 cut(s) | 1210 |
| EcoRII | CCWGG | 7 cut(s) | 100, 244, 1270, 1590, 1620, 1712, 2363 |
| EcoT14I | CCWWGG | 1 cut(s) | 754 |
| EcoT22I | ATGCAT | 1 cut(s) | 2765 |
| ErhI | CCWWGG | 1 cut(s) | 754 |
| FaeI | CATG | 8 cut(s) | 89, 214, 654, 967, 1389, 1529, 2711, 2763 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1107, 1139 |
| FaqI | GGGAC | 3 cut(s) | 262, 332, 2220 |
| FatI | CATG | 8 cut(s) | 85, 210, 650, 963, 1385, 1525, 2707, 2759 |
| FauI | CCCGC | 2 cut(s) | 105, 2166 |
| FblI | GTMKAC | 1 cut(s) | 2035 |
| FokI | GGATG | 7 cut(s) | 584, 708, 777, 1254, 1637, 1735, 1975 |
| FspBI | CTAG | 3 cut(s) | 224, 1079, 1335 |
| GsaI | CCCAGC | 2 cut(s) | 1049, 1539 |
| HaeIII | GGCC | 6 cut(s) | 169, 601, 1676, 2295, 2646, 2697 |
| HapII | CCGG | 5 cut(s) | 956, 1142, 1287, 1759, 2735 |
| Hin1II | CATG | 8 cut(s) | 89, 214, 654, 967, 1389, 1529, 2711, 2763 |
| HincII | GTYRAC | 1 cut(s) | 175 |
| HindII | GTYRAC | 1 cut(s) | 175 |
| HinfI | GANTC | 5 cut(s) | 340, 404, 454, 806, 1094 |
| HpaI | GTTAAC | 1 cut(s) | 175 |
| HpaII | CCGG | 5 cut(s) | 956, 1142, 1287, 1759, 2735 |
| HphI | GGTGA | 7 cut(s) | 638, 1430, 1878, 2188, 2202, 2469, 2722 |
| Hpy166II | GTNNAC | 3 cut(s) | 175, 657, 2036 |
| Hpy188I | TCNGA | 7 cut(s) | 339, 409, 811, 912, 1850, 2349, 2433 |
| Hpy188III | TCNNGA | 9 cut(s) | 697, 713, 725, 786, 1098, 1204, 1292, 1643, 1939 |
| Hpy8I | GTNNAC | 3 cut(s) | 175, 657, 2036 |
| HpyCH4III | ACNGT | 8 cut(s) | 59, 179, 848, 1031, 1866, 2176, 2388, 2691 |
| HpyCH4IV | ACGT | 1 cut(s) | 260 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 220, 286, 1183, 1793, 2613 |
| HpySE526I | ACGT | 1 cut(s) | 260 |
| Hsp92II | CATG | 8 cut(s) | 89, 214, 654, 967, 1389, 1529, 2711, 2763 |
| KspAI | GTTAAC | 1 cut(s) | 175 |
| LguI | GCTCTTC | 1 cut(s) | 1728 |
| LmnI | GCTCC | 8 cut(s) | 194, 1588, 1771, 1801, 2011, 2410, 2470, 2521 |
| LweI | GCATC | 3 cut(s) | 755, 880, 1615 |
| MabI | ACCWGGT | 1 cut(s) | 1712 |
| MaeI | CTAG | 3 cut(s) | 224, 1079, 1335 |
| MaeII | ACGT | 1 cut(s) | 260 |
| MaeIII | GTNAC | 3 cut(s) | 329, 1391, 2497 |
| MflI | RGATCY | 5 cut(s) | 104, 217, 1004, 1274, 2623 |
| MhlI | GDGCHC | 3 cut(s) | 1798, 2407, 2601 |
| MlsI | TGGCCA | 1 cut(s) | 2697 |
| MluNI | TGGCCA | 1 cut(s) | 2697 |
| MmeI | TCCRAC | 5 cut(s) | 172, 1325, 1327, 1456, 1801 |
| Mox20I | TGGCCA | 1 cut(s) | 2697 |
| Mph1103I | ATGCAT | 1 cut(s) | 2765 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1150, 1425 |
| MscI | TGGCCA | 1 cut(s) | 2697 |
| MseI | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1314, 1359, 1488, 2511 |
| MslI | CAYNNNNRTG | 1 cut(s) | 644 |
| Msp20I | TGGCCA | 1 cut(s) | 2697 |
| MspA1I | CMGCKG | 3 cut(s) | 289, 1049, 1373 |
| MspI | CCGG | 5 cut(s) | 956, 1142, 1287, 1759, 2735 |
| Mva1269I | GAATGC | 3 cut(s) | 1768, 2575, 2763 |
| MvaI | CCWGG | 7 cut(s) | 102, 246, 1272, 1592, 1622, 1714, 2365 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 220, 286, 1183, 1793, 2613 |
| NciI | CCSGG | 4 cut(s) | 957, 1143, 1759, 2735 |
| NlaIII | CATG | 8 cut(s) | 89, 214, 654, 967, 1389, 1529, 2711, 2763 |
| NlaIV | GGNNCC | 3 cut(s) | 168, 2178, 2236 |
| NmuCI | GTSAC | 1 cut(s) | 2497 |
| NsiI | ATGCAT | 1 cut(s) | 2765 |
| NspI | RCATGY | 1 cut(s) | 1389 |
| PceI | AGGCCT | 1 cut(s) | 601 |
| PciSI | GCTCTTC | 1 cut(s) | 1728 |
| PctI | GAATGC | 3 cut(s) | 1768, 2575, 2763 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1150, 1425 |
| PfeI | GAWTC | 5 cut(s) | 340, 404, 454, 806, 1094 |
| PflFI | GACNNNGTC | 1 cut(s) | 1714 |
| PfoI | TCCNGGA | 3 cut(s) | 1141, 1270, 1590 |
| PinAI | ACCGGT | 1 cut(s) | 1286 |
| Psp6I | CCWGG | 7 cut(s) | 100, 244, 1270, 1590, 1620, 1712, 2363 |
| PspFI | CCCAGC | 2 cut(s) | 1045, 1535 |
| PspGI | CCWGG | 7 cut(s) | 100, 244, 1270, 1590, 1620, 1712, 2363 |
| PspN4I | GGNNCC | 3 cut(s) | 168, 2178, 2236 |
| PspPI | GGNCC | 5 cut(s) | 167, 654, 718, 2234, 2645 |
| PstI | CTGCAG | 2 cut(s) | 550, 1579 |
| PsuI | RGATCY | 5 cut(s) | 104, 217, 1004, 1274, 2623 |
| PsyI | GACNNNGTC | 1 cut(s) | 1714 |
| PvuII | CAGCTG | 2 cut(s) | 1049, 1373 |
| RsaI | GTAC | 6 cut(s) | 61, 184, 1519, 1915, 2203, 2553 |
| RsaNI | GTAC | 6 cut(s) | 60, 183, 1518, 1914, 2202, 2552 |
| RseI | CAYNNNNRTG | 1 cut(s) | 644 |
| SapI | GCTCTTC | 1 cut(s) | 1728 |
| SaqAI | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1314, 1359, 1488, 2511 |
| Sau96I | GGNCC | 5 cut(s) | 167, 654, 718, 2234, 2645 |
| ScaI | AGTACT | 4 cut(s) | 184, 1915, 2203, 2553 |
| SduI | GDGCHC | 3 cut(s) | 1798, 2407, 2601 |
| SexAI | ACCWGGT | 1 cut(s) | 1712 |
| SfaNI | GCATC | 3 cut(s) | 755, 880, 1615 |
| SfcI | CTRYAG | 2 cut(s) | 546, 1575 |
| SinI | GGWCC | 3 cut(s) | 654, 718, 2234 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 644 |
| SmlI | CTYRAG | 3 cut(s) | 1636, 1962, 2317 |
| SmoI | CTYRAG | 3 cut(s) | 1636, 1962, 2317 |
| SseBI | AGGCCT | 1 cut(s) | 601 |
| SsiI | CCGC | 7 cut(s) | 98, 221, 287, 937, 1727, 1824, 2159 |
| SspI | AATATT | 1 cut(s) | 1559 |
| SspMI | CTAG | 3 cut(s) | 224, 1079, 1335 |
| StuI | AGGCCT | 1 cut(s) | 601 |
| StyI | CCWWGG | 1 cut(s) | 754 |
| TaaI | ACNGT | 8 cut(s) | 59, 179, 848, 1031, 1866, 2176, 2388, 2691 |
| TaiI | ACGT | 1 cut(s) | 263 |
| TaqI | TCGA | 5 cut(s) | 80, 833, 1463, 1642, 2098 |
| TatI | WGTACW | 5 cut(s) | 59, 182, 1913, 2201, 2551 |
| TauI | GCSGC | 2 cut(s) | 289, 940 |
| TfiI | GAWTC | 5 cut(s) | 340, 404, 454, 806, 1094 |
| Tru1I | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1314, 1359, 1488, 2511 |
| Tru9I | TTAA | 9 cut(s) | 12, 38, 174, 300, 554, 1314, 1359, 1488, 2511 |
| TscAI | CASTG | 9 cut(s) | 55, 439, 628, 1463, 1570, 1695, 1869, 2307, 2391 |
| TseFI | GTSAC | 1 cut(s) | 2497 |
| Tsp45I | GTSAC | 1 cut(s) | 2497 |
| TspGWI | ACGGA | 1 cut(s) | 2467 |
| TspRI | CASTG | 9 cut(s) | 55, 439, 628, 1463, 1570, 1695, 1869, 2307, 2391 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1714 |
| VpaK11BI | GGWCC | 3 cut(s) | 654, 718, 2234 |
| XapI | RAATTY | 3 cut(s) | 1210, 1425, 2396 |
| XceI | RCATGY | 1 cut(s) | 1389 |
| XmiI | GTMKAC | 1 cut(s) | 2035 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1150, 1425 |
| XspI | CTAG | 3 cut(s) | 224, 1079, 1335 |
| ZrmI | AGTACT | 4 cut(s) | 184, 1915, 2203, 2553 |
| Zsp2I | ATGCAT | 1 cut(s) | 2765 |