Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14890 |
| fragaria_vesca | FvH4_4g15630 |
| malus_domestica | MD13G1193300.v1.1 |
| prunus_persica | Prupe.1G013900_v2.0.a1 |
| pyrus_communis | pycom16g16400 |
| rosa_chinensis | RchiOBHm_Chr4g0416181 |
| rosa_laevigata | RLG00000008008 |
| rosa_multiflora | Rmu_co8387285.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00360040 |
| rosa_rugosa | Rorug04G0139700 |
| rosa_samantha | Rh4AG201700 Rh4BG199100 Rh4CG214200 Rh4DG198900 |
| rosa_wichuraiana | Rw4G017050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 167, 344 |
| AciI | CCGC | 3 cut(s) | 5, 100, 236 |
| AclWI | GGATC | 3 cut(s) | 111, 126, 139 |
| AfaI | GTAC | 1 cut(s) | 365 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 105, 373 |
| AgeI | ACCGGT | 1 cut(s) | 105 |
| AluBI | AGCT | 5 cut(s) | 85, 175, 250, 409, 434 |
| AluI | AGCT | 5 cut(s) | 85, 175, 250, 409, 434 |
| Alw21I | GWGCWC | 1 cut(s) | 156 |
| Alw26I | GTCTC | 1 cut(s) | 188 |
| AlwI | GGATC | 3 cut(s) | 111, 126, 139 |
| AoxI | GGCC | 2 cut(s) | 6, 95 |
| ApeKI | GCWGC | 1 cut(s) | 409 |
| AsiGI | ACCGGT | 1 cut(s) | 105 |
| AspS9I | GGNCC | 3 cut(s) | 7, 96, 390 |
| AvaII | GGWCC | 1 cut(s) | 390 |
| BamHI | GGATCC | 1 cut(s) | 131 |
| BauI | CACGAG | 1 cut(s) | 155 |
| Bbv12I | GWGCWC | 1 cut(s) | 156 |
| BbvI | GCAGC | 1 cut(s) | 396 |
| BccI | CCATC | 1 cut(s) | 31 |
| BceAI | ACGGC | 2 cut(s) | 128, 293 |
| BclI | TGATCA | 1 cut(s) | 298 |
| BcoDI | GTCTC | 1 cut(s) | 188 |
| BfaI | CTAG | 1 cut(s) | 203 |
| BisI | GCNGC | 3 cut(s) | 6, 236, 410 |
| BlsI | GCNGC | 3 cut(s) | 7, 237, 411 |
| Bme18I | GGWCC | 1 cut(s) | 390 |
| BmgT120I | GGNCC | 3 cut(s) | 7, 96, 390 |
| BmiI | GGNNCC | 2 cut(s) | 98, 133 |
| BpuEI | CTTGAG | 1 cut(s) | 197 |
| BsaI | GGTCTC | 1 cut(s) | 188 |
| BsaWI | WCCGGW | 1 cut(s) | 105 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 10, 40 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 105, 373 |
| Bse118I | RCCGGY | 1 cut(s) | 105 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 105, 373 |
| BseMII | CTCAG | 3 cut(s) | 162, 275, 308 |
| BseXI | GCAGC | 1 cut(s) | 396 |
| BsgI | GTGCAG | 2 cut(s) | 106, 258 |
| BshFI | GGCC | 2 cut(s) | 8, 97 |
| BshTI | ACCGGT | 1 cut(s) | 105 |
| BsiHKAI | GWGCWC | 1 cut(s) | 156 |
| BsiSI | CCGG | 2 cut(s) | 94, 106 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 105, 373 |
| BsmAI | GTCTC | 1 cut(s) | 188 |
| BsnI | GGCC | 2 cut(s) | 8, 97 |
| Bso31I | GGTCTC | 1 cut(s) | 188 |
| Bsp1286I | GDGCHC | 1 cut(s) | 156 |
| Bsp143I | GATC | 3 cut(s) | 116, 131, 298 |
| BspACI | CCGC | 3 cut(s) | 5, 100, 236 |
| BspANI | GGCC | 2 cut(s) | 8, 97 |
| BspCNI | CTCAG | 3 cut(s) | 163, 276, 309 |
| BspLI | GGNNCC | 2 cut(s) | 98, 133 |
| BspPI | GGATC | 3 cut(s) | 111, 126, 139 |
| BspTNI | GGTCTC | 1 cut(s) | 188 |
| BsrFI | RCCGGY | 1 cut(s) | 105 |
| BssAI | RCCGGY | 1 cut(s) | 105 |
| BssMI | GATC | 3 cut(s) | 116, 131, 298 |
| BssNAI | GTATAC | 1 cut(s) | 345 |
| BssSI | CACGAG | 1 cut(s) | 155 |
| Bst1107I | GTATAC | 1 cut(s) | 345 |
| Bst2BI | CACGAG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 2 cut(s) | 127, 372 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 267 |
| BstC8I | GCNNGC | 1 cut(s) | 248 |
| BstDEI | CTNAG | 3 cut(s) | 171, 284, 317 |
| BstKTI | GATC | 3 cut(s) | 119, 134, 301 |
| BstMAI | GTCTC | 1 cut(s) | 188 |
| BstMBI | GATC | 3 cut(s) | 116, 131, 298 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 232, 267, 418 |
| BstV1I | GCAGC | 1 cut(s) | 396 |
| BstX2I | RGATCY | 1 cut(s) | 131 |
| BstYI | RGATCY | 1 cut(s) | 131 |
| BstZ17I | GTATAC | 1 cut(s) | 345 |
| BsuRI | GGCC | 2 cut(s) | 8, 97 |
| Cac8I | GCNNGC | 1 cut(s) | 248 |
| Cfr10I | RCCGGY | 1 cut(s) | 105 |
| Cfr13I | GGNCC | 3 cut(s) | 7, 96, 390 |
| Csp6I | GTAC | 1 cut(s) | 364 |
| CspAI | ACCGGT | 1 cut(s) | 105 |
| CviAII | CATG | 2 cut(s) | 239, 262 |
| CviQI | GTAC | 1 cut(s) | 364 |
| DdeI | CTNAG | 3 cut(s) | 171, 284, 317 |
| DpnI | GATC | 3 cut(s) | 118, 133, 300 |
| DpnII | GATC | 3 cut(s) | 116, 131, 298 |
| Eco31I | GGTCTC | 1 cut(s) | 188 |
| Eco47I | GGWCC | 1 cut(s) | 390 |
| FaeI | CATG | 2 cut(s) | 242, 265 |
| FaiI | YATR | 4 cut(s) | 240, 263, 314, 345 |
| FatI | CATG | 2 cut(s) | 238, 261 |
| FauI | CCCGC | 1 cut(s) | 107 |
| FbaI | TGATCA | 1 cut(s) | 298 |
| FblI | GTMKAC | 2 cut(s) | 167, 344 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 236, 410 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 236, 410 |
| FspBI | CTAG | 1 cut(s) | 203 |
| GluI | GCNGC | 3 cut(s) | 6, 236, 410 |
| HaeIII | GGCC | 2 cut(s) | 8, 97 |
| HapII | CCGG | 2 cut(s) | 94, 106 |
| Hin1II | CATG | 2 cut(s) | 242, 265 |
| HindIII | AAGCTT | 1 cut(s) | 248 |
| HinfI | GANTC | 2 cut(s) | 66, 218 |
| HpaII | CCGG | 2 cut(s) | 94, 106 |
| Hpy166II | GTNNAC | 2 cut(s) | 168, 345 |
| Hpy188I | TCNGA | 4 cut(s) | 131, 285, 303, 376 |
| Hpy188III | TCNNGA | 2 cut(s) | 203, 398 |
| Hpy8I | GTNNAC | 2 cut(s) | 168, 345 |
| Hpy99I | CGWCG | 1 cut(s) | 131 |
| HpyAV | CCTTC | 5 cut(s) | 20, 39, 286, 302, 329 |
| HpyCH4III | ACNGT | 2 cut(s) | 127, 372 |
| HpyCH4V | TGCA | 5 cut(s) | 123, 246, 261, 275, 421 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 232, 267, 418 |
| HpyF3I | CTNAG | 3 cut(s) | 171, 284, 317 |
| Hsp92II | CATG | 2 cut(s) | 242, 265 |
| Ksp22I | TGATCA | 1 cut(s) | 298 |
| Kzo9I | GATC | 3 cut(s) | 116, 131, 298 |
| LpnPI | CCDG | 7 cut(s) | 76, 107, 119, 133, 207, 285, 411 |
| Lsp1109I | GCAGC | 1 cut(s) | 396 |
| MaeI | CTAG | 1 cut(s) | 203 |
| MaeIII | GTNAC | 2 cut(s) | 108, 380 |
| MalI | GATC | 3 cut(s) | 118, 133, 300 |
| MboI | GATC | 3 cut(s) | 116, 131, 298 |
| MboII | GAAGA | 1 cut(s) | 413 |
| MflI | RGATCY | 1 cut(s) | 131 |
| MhlI | GDGCHC | 1 cut(s) | 156 |
| MluCI | AATT | 1 cut(s) | 422 |
| MlyI | GAGTC | 2 cut(s) | 60, 227 |
| MmeI | TCCRAC | 2 cut(s) | 109, 354 |
| MnlI | CCTC | 3 cut(s) | 151, 172, 178 |
| MspI | CCGG | 2 cut(s) | 94, 106 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 232, 267, 418 |
| NdeII | GATC | 3 cut(s) | 116, 131, 298 |
| NlaIII | CATG | 2 cut(s) | 242, 265 |
| NlaIV | GGNNCC | 2 cut(s) | 98, 133 |
| NmuCI | GTSAC | 2 cut(s) | 108, 380 |
| PinAI | ACCGGT | 1 cut(s) | 105 |
| PkrI | GCNGC | 3 cut(s) | 7, 237, 411 |
| PleI | GAGTC | 2 cut(s) | 60, 226 |
| PpsI | GAGTC | 2 cut(s) | 60, 226 |
| PspN4I | GGNNCC | 2 cut(s) | 98, 133 |
| PspPI | GGNCC | 3 cut(s) | 7, 96, 390 |
| PsuI | RGATCY | 1 cut(s) | 131 |
| RsaI | GTAC | 1 cut(s) | 365 |
| RsaNI | GTAC | 1 cut(s) | 364 |
| SatI | GCNGC | 3 cut(s) | 6, 236, 410 |
| Sau3AI | GATC | 3 cut(s) | 116, 131, 298 |
| Sau96I | GGNCC | 3 cut(s) | 7, 96, 390 |
| SchI | GAGTC | 2 cut(s) | 60, 227 |
| SduI | GDGCHC | 1 cut(s) | 156 |
| SinI | GGWCC | 1 cut(s) | 390 |
| SmlI | CTYRAG | 1 cut(s) | 176 |
| SmoI | CTYRAG | 1 cut(s) | 176 |
| Sse9I | AATT | 1 cut(s) | 422 |
| SsiI | CCGC | 3 cut(s) | 5, 100, 236 |
| SspMI | CTAG | 1 cut(s) | 203 |
| TaaI | ACNGT | 2 cut(s) | 127, 372 |
| TasI | AATT | 1 cut(s) | 422 |
| TauI | GCSGC | 2 cut(s) | 8, 238 |
| TseFI | GTSAC | 2 cut(s) | 108, 380 |
| TseI | GCWGC | 1 cut(s) | 409 |
| Tsp45I | GTSAC | 2 cut(s) | 108, 380 |
| VpaK11BI | GGWCC | 1 cut(s) | 390 |
| XbaI | TCTAGA | 1 cut(s) | 202 |
| XmiI | GTMKAC | 2 cut(s) | 167, 344 |
| XspI | CTAG | 1 cut(s) | 203 |