Prupe.1G024900_v2.0.a1

PDDEXK-like family of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013897
Physical Location & Seq
Forward (+)
1717112 .. 1719535
2424 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G024900.1

Sequence Viewer

Length: 1218 bp
ATGCCATTTCCGATGAAGATCCAGCCGATAGATGTCGACTCCGAGGCCTTGATCGAACCGGCCAGGGTCGACTCGGCGAAACCGGTCTTGAAATCGCGGCTCAGGAGGCTGTTTGACCGGCAGTTCCCGAGCGTGCTTAGAATTTCTTCGGCTCCGGAGAAGCCTAGCAGTGGTACTGAGCCACCGCAGCAGAGCTTCAACAACAGCAAGGACGGAGGCAACGCCGCTGCTACCACGGAGTTCGAGCCGAGCTCGGTTTGCTTGGCGAAGATGGTTCAGAATTTCATCGAAGAAAGCAACGAGAAGCAGCCGCCGCCGAAATGTGGCCGCAACCGCTGCAATTGCTTTCACGGCAACAGCAATGACAGCTCCGACGACGAGCTTGACGTCTTCGGTGGCGGTTTCGGCGATTCAATCCCCTCGGGTTCGTTCGGCGGCGACGCCTCCGATATTCTGAAGAGTCTGATTCCATGCGTGAGTGTGGAGGAGAGAAACCTCTTAGCCCATACAGCGAATATCGTCGAAGCAAACAAGAATCAGAAACAGAAAGACGATTGGAGGAAGGCCGTCACCGACGGACTCAACTCTCTCGGCTACGATTCCTCCATCTGCAAATCGAAATGGGAGAAATCGTCCTCTTTCCCTGCCGGTGAATACGAGTATATCGATGTGATGGTAGAGGGCGACAGGTTGTTGATTGACATAGATTTCCGATCGGAATTTGAGGTCGCTCGATCCACTGGGCCCTACAAGGCCGTCCTTCAATCCCTGCCGTACATTTTTGTTGGAAAATCGGACCGTCTTGGCCAGATCGTCTCCATCGTATCGGAGGCAGCCAAACAGAGCCTGAAGAAGAAGGGCATGCATTTCCCTCCATGGCGGAAAGCCGAGTACATGCGCGCCAAGTGGCTCTCTCCCTACACCCGAGCCACAGCAATCAATCCCCAAAACGACGCCGCTCCGGCGCCGGAGGTCCCAACCGTAGTTTCCGATGCTCCGACCGAGACCGACAATCTCAGCGATTGCGGCGAACTCGAGTTGATCTTCGGCAAGAGCCCGTCGCTGCCGGCTACCCCTCTGCCGTCGCCAGCGGAAAATCCAGTTTCCGGCGAGAAGGAGGTGGTGAAGTGGCAGCCGCCGGCGATCAAGCCGAAGAGCGTCGAGAGAGGAGCGCGGATCGTGACCGGATTGGCCTCGCTGCTTAAGGAGAAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PDDEXK_6

Protein Analysis

406

Amino Acids

44.24

Weight (kDa)

5.57

Isoelectric Point (pI)

56.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013897)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22970 AT3G22970
fragaria_vesca FvH4_4g01830
malus_domestica MD13G1202800.v1.1
prunus_persica Prupe.1G024900_v2.0.a1
pyrus_communis pycom13g17580 pycom16g17110
rosa_chinensis RchiOBHm_Chr4g0388891
rosa_laevigata RLG00000010016
rosa_multiflora Rmu_sc0000697.1_g000004
rosa_roxburghii Rroxscaffold_5G00335200
rosa_rugosa Rorug03G0320800
rosa_samantha Rh4AG025300 Rh4BG018500 Rh4CG028300 Rh4DG019000
rosa_wichuraiana Rw4G001820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 390
AccB1I GGYRCC 1 cut(s) 964
AccBSI CCGCTC 1 cut(s) 959
AccI GTMKAC 2 cut(s) 36, 69
AccII CGCG 3 cut(s) 97, 900, 1174
AccIII TCCGGA 1 cut(s) 154
AclWI GGATC 3 cut(s) 13, 729, 1184
AcoI YGGCCR 3 cut(s) 60, 325, 805
AcsI RAATTY 3 cut(s) 141, 280, 719
AcuI CTGAAG 2 cut(s) 476, 869
AcyI GRCGYC 4 cut(s) 387, 441, 954, 965
AfaI GTAC 3 cut(s) 175, 776, 893
AfiI CCNNNNNNNGG 3 cut(s) 170, 323, 1106
AflII CTTAAG 1 cut(s) 1202
AgeI ACCGGT 1 cut(s) 82
AgsI TTSAA 4 cut(s) 91, 199, 414, 764
AjnI CCWGG 1 cut(s) 62
AjuI GAANNNNNNNTTGG 2 cut(s) 970, 1002
AluBI AGCT 4 cut(s) 195, 252, 369, 382
AluI AGCT 4 cut(s) 195, 252, 369, 382
Alw21I GWGCWC 1 cut(s) 254
Alw26I GTCTC 2 cut(s) 820, 998
AlwI GGATC 3 cut(s) 13, 729, 1184
AlwNI CAGNNNCTG 1 cut(s) 847
Ama87I CYCGRG 4 cut(s) 127, 421, 924, 1034
Aor13HI TCCGGA 1 cut(s) 154
AoxI GGCC 8 cut(s) 45, 60, 325, 564, 743, 753, 805, 1191
ApaI GGGCCC 1 cut(s) 747
ApeKI GCWGC 8 cut(s) 187, 227, 307, 336, 833, 1063, 1132, 1198
ApoI RAATTY 3 cut(s) 141, 280, 719
AsiGI ACCGGT 1 cut(s) 82
Asp700I GAANNNNTTC 1 cut(s) 145
AspLEI GCGC 4 cut(s) 900, 902, 967, 1174
AspS9I GGNCC 4 cut(s) 743, 744, 796, 973
AsuHPI GGTGA 3 cut(s) 562, 662, 1135
AvaI CYCGRG 4 cut(s) 127, 421, 924, 1034
AvaII GGWCC 2 cut(s) 796, 973
BaeGI GKGCMC 1 cut(s) 747
BalI TGGCCA 1 cut(s) 807
BanI GGYRCC 1 cut(s) 964
BanII GRGCYC 3 cut(s) 254, 747, 1058
BbsI GAAGAC 1 cut(s) 382
Bbv12I GWGCWC 1 cut(s) 254
BbvI GCAGC 8 cut(s) 199, 214, 319, 323, 845, 1050, 1144, 1185
BccI CCATC 4 cut(s) 265, 614, 667, 827
BceAI ACGGC 5 cut(s) 367, 551, 740, 757, 1066
BciT130I CCWGG 1 cut(s) 64
BcoDI GTCTC 2 cut(s) 820, 998
BfaI CTAG 1 cut(s) 165
BfoI RGCGCY 1 cut(s) 968
BfrI CTTAAG 1 cut(s) 1202
BglI GCCNNNNNGGC 1 cut(s) 962
Bme1390I CCNGG 1 cut(s) 64
Bme18I GGWCC 2 cut(s) 796, 973
BmeT110I CYCGRG 4 cut(s) 127, 421, 924, 1034
BmgT120I GGNCC 4 cut(s) 743, 744, 796, 973
BmiI GGNNCC 4 cut(s) 153, 745, 966, 975
BmrFI CCNGG 1 cut(s) 64
BmrI ACTGGG 1 cut(s) 750
BmsI GCATC 1 cut(s) 982
BmuI ACTGGG 1 cut(s) 750
BpiI GAAGAC 1 cut(s) 382
BplI GAGNNNNNCTC 2 cut(s) 236, 268
Bpu10I CCTNAGC 1 cut(s) 101
Bsa29I ATCGAT 1 cut(s) 666
BsaBI GATNNNNATC 1 cut(s) 17
BsaHI GRCGYC 4 cut(s) 387, 441, 954, 965
BsaI GGTCTC 1 cut(s) 998
BsaJI CCNNGG 5 cut(s) 42, 63, 234, 420, 875
BsaWI WCCGGW 3 cut(s) 82, 154, 1184
BsaXI ACNNNNNCTCC 4 cut(s) 587, 617, 617, 647
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 323, 1106
Bse118I RCCGGY 6 cut(s) 58, 82, 117, 647, 1066, 1138
Bse1I ACTGG 2 cut(s) 745, 1100
Bse3DI GCAATG 1 cut(s) 367
Bse8I GATNNNNATC 1 cut(s) 17
BseAI TCCGGA 1 cut(s) 154
BseBI CCWGG 1 cut(s) 64
BseCI ATCGAT 1 cut(s) 666
BseDI CCNNGG 5 cut(s) 42, 63, 234, 420, 875
BseJI GATNNNNATC 1 cut(s) 17
BseLI CCNNNNNNNGG 3 cut(s) 170, 323, 1106
BseMI GCAATG 1 cut(s) 367
BseMII CTCAG 3 cut(s) 115, 168, 1030
BseNI ACTGG 2 cut(s) 745, 1100
BsePI GCGCGC 1 cut(s) 898
BseRI GAGGAG 2 cut(s) 500, 1182
BseSI GKGCMC 1 cut(s) 747
BseXI GCAGC 8 cut(s) 199, 214, 319, 323, 845, 1050, 1144, 1185
Bsh1236I CGCG 3 cut(s) 97, 900, 1174
Bsh1285I CGRYCG 2 cut(s) 716, 1002
BshFI GGCC 8 cut(s) 47, 62, 327, 566, 745, 755, 807, 1193
BshNI GGYRCC 1 cut(s) 964
BshTI ACCGGT 1 cut(s) 82
BshVI ATCGAT 1 cut(s) 666
BsiEI CGRYCG 2 cut(s) 716, 1002
BsiHKAI GWGCWC 1 cut(s) 254
BsiHKCI CYCGRG 4 cut(s) 127, 421, 924, 1034
BslFI GGGAC 1 cut(s) 959
BslI CCNNNNNNNGG 3 cut(s) 170, 323, 1106
BsmAI GTCTC 2 cut(s) 820, 998
BsmBI CGTCTC 1 cut(s) 820
BsmFI GGGAC 1 cut(s) 959
BsnI GGCC 8 cut(s) 47, 62, 327, 566, 745, 755, 807, 1193
Bso31I GGTCTC 1 cut(s) 998
BsoBI CYCGRG 4 cut(s) 127, 421, 924, 1034
Bsp120I GGGCCC 1 cut(s) 743
Bsp1286I GDGCHC 3 cut(s) 254, 747, 1058
Bsp13I TCCGGA 1 cut(s) 154
Bsp143I GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
Bsp19I CCATGG 1 cut(s) 875
BspANI GGCC 8 cut(s) 47, 62, 327, 566, 745, 755, 807, 1193
BspCNI CTCAG 3 cut(s) 114, 169, 1029
BspDI ATCGAT 1 cut(s) 666
BspEI TCCGGA 1 cut(s) 154
BspFNI CGCG 3 cut(s) 97, 900, 1174
BspLI GGNNCC 4 cut(s) 153, 745, 966, 975
BspPI GGATC 3 cut(s) 13, 729, 1184
BspQI GCTCTTC 1 cut(s) 1148
BspT107I GGYRCC 1 cut(s) 964
BspTI CTTAAG 1 cut(s) 1202
BspTNI GGTCTC 1 cut(s) 998
BsrBI CCGCTC 1 cut(s) 959
BsrDI GCAATG 1 cut(s) 367
BsrFI RCCGGY 6 cut(s) 58, 82, 117, 647, 1066, 1138
BsrI ACTGG 2 cut(s) 745, 1100
BssAI RCCGGY 6 cut(s) 58, 82, 117, 647, 1066, 1138
BssECI CCNNGG 5 cut(s) 42, 63, 234, 420, 875
BssHII GCGCGC 1 cut(s) 898
BssMI GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
BssNI GRCGYC 4 cut(s) 387, 441, 954, 965
BssT1I CCWWGG 1 cut(s) 875
Bst2UI CCWGG 1 cut(s) 64
Bst4CI ACNGT 2 cut(s) 800, 982
Bst6I CTCTTC 2 cut(s) 452, 1148
BstACI GRCGYC 4 cut(s) 387, 441, 954, 965
BstAFI CTTAAG 1 cut(s) 1202
BstAPI GCANNNNNTGC 1 cut(s) 336
BstC8I GCNNGC 6 cut(s) 134, 863, 900, 1068, 1089, 1140
BstDEI CTNAG 5 cut(s) 101, 137, 177, 499, 1016
BstDSI CCRYGG 2 cut(s) 234, 875
BstFNI CGCG 3 cut(s) 97, 900, 1174
BstH2I RGCGCY 1 cut(s) 968
BstHHI GCGC 4 cut(s) 900, 902, 967, 1174
BstKTI GATC 8 cut(s) 21, 54, 716, 737, 813, 1044, 1146, 1179
BstMAI GTCTC 2 cut(s) 820, 998
BstMBI GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
BstMCI CGRYCG 2 cut(s) 716, 1002
BstNI CCWGG 1 cut(s) 64
BstNSI RCATGY 2 cut(s) 865, 898
BstSCI CCNGG 1 cut(s) 62
BstSLI GKGCMC 1 cut(s) 747
BstUI CGCG 3 cut(s) 97, 900, 1174
BstV1I GCAGC 8 cut(s) 199, 214, 319, 323, 845, 1050, 1144, 1185
BstV2I GAAGAC 1 cut(s) 382
BstX2I RGATCY 1 cut(s) 18
BstYI RGATCY 1 cut(s) 18
Bsu15I ATCGAT 1 cut(s) 666
BsuRI GGCC 8 cut(s) 47, 62, 327, 566, 745, 755, 807, 1193
BsuTUI ATCGAT 1 cut(s) 666
BtgI CCRYGG 2 cut(s) 234, 875
BtsI GCAGTG 1 cut(s) 175
BtsIMutI CAGTG 2 cut(s) 175, 738
Cac8I GCNNGC 6 cut(s) 134, 863, 900, 1068, 1089, 1140
CaiI CAGNNNCTG 1 cut(s) 847
CfoI GCGC 4 cut(s) 900, 902, 967, 1174
Cfr10I RCCGGY 6 cut(s) 58, 82, 117, 647, 1066, 1138
Cfr13I GGNCC 4 cut(s) 743, 744, 796, 973
ClaI ATCGAT 1 cut(s) 666
CpoI CGGWCCG 1 cut(s) 796
CseI GACGC 3 cut(s) 449, 962, 1147
Csp6I GTAC 3 cut(s) 174, 775, 892
CspAI ACCGGT 1 cut(s) 82
CspI CGGWCCG 1 cut(s) 796
CviAII CATG 4 cut(s) 471, 862, 876, 895
CviQI GTAC 3 cut(s) 174, 775, 892
DdeI CTNAG 5 cut(s) 101, 137, 177, 499, 1016
DinI GGCGCC 1 cut(s) 966
DpnI GATC 8 cut(s) 20, 53, 715, 736, 812, 1043, 1145, 1178
DpnII GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
EaeI YGGCCR 3 cut(s) 60, 325, 805
Eam1104I CTCTTC 2 cut(s) 452, 1148
EarI CTCTTC 2 cut(s) 452, 1148
EciI GGCGGA 1 cut(s) 895
Ecl136II GAGCTC 1 cut(s) 252
Eco130I CCWWGG 1 cut(s) 875
Eco147I AGGCCT 1 cut(s) 47
Eco24I GRGCYC 3 cut(s) 254, 747, 1058
Eco31I GGTCTC 1 cut(s) 998
Eco47I GGWCC 2 cut(s) 796, 973
Eco53kI GAGCTC 1 cut(s) 252
Eco57I CTGAAG 2 cut(s) 476, 869
Eco88I CYCGRG 4 cut(s) 127, 421, 924, 1034
EcoICRI GAGCTC 1 cut(s) 252
EcoO109I RGGNCCY 2 cut(s) 744, 973
EcoRII CCWGG 1 cut(s) 62
EcoT14I CCWWGG 1 cut(s) 875
EcoT22I ATGCAT 1 cut(s) 867
EcoT38I GRGCYC 3 cut(s) 254, 747, 1058
EgeI GGCGCC 1 cut(s) 966
EheI GGCGCC 1 cut(s) 966
ErhI CCWWGG 1 cut(s) 875
Esp3I CGTCTC 1 cut(s) 820
FaeI CATG 4 cut(s) 474, 865, 879, 898
FaiI YATR 7 cut(s) 472, 507, 663, 704, 863, 877, 896
FaqI GGGAC 1 cut(s) 959
FatI CATG 4 cut(s) 470, 861, 875, 894
FblI GTMKAC 2 cut(s) 36, 69
FriOI GRGCYC 3 cut(s) 254, 747, 1058
FspBI CTAG 1 cut(s) 165
GlaI GCGC 4 cut(s) 899, 901, 966, 1173
HaeII RGCGCY 1 cut(s) 968
HaeIII GGCC 8 cut(s) 47, 62, 327, 566, 745, 755, 807, 1193
HgaI GACGC 3 cut(s) 449, 962, 1147
HhaI GCGC 4 cut(s) 900, 902, 967, 1174
Hin1I GRCGYC 4 cut(s) 387, 441, 954, 965
Hin1II CATG 4 cut(s) 474, 865, 879, 898
Hin6I GCGC 4 cut(s) 898, 900, 965, 1172
HinP1I GCGC 4 cut(s) 898, 900, 965, 1172
HincII GTYRAC 2 cut(s) 37, 70
HindII GTYRAC 2 cut(s) 37, 70
HinfI GANTC 8 cut(s) 38, 71, 410, 460, 466, 535, 579, 599
HphI GGTGA 3 cut(s) 562, 662, 1135
Hpy166II GTNNAC 2 cut(s) 37, 70
Hpy188III TCNNGA 6 cut(s) 88, 103, 127, 155, 1162, 1180
Hpy8I GTNNAC 2 cut(s) 37, 70
Hpy99I CGWCG 9 cut(s) 377, 380, 443, 524, 578, 956, 1063, 1087, 1163
HpyAV CCTTC 4 cut(s) 556, 770, 850, 1108
HpyCH4III ACNGT 2 cut(s) 800, 982
HpyCH4IV ACGT 1 cut(s) 387
HpyCH4V TGCA 3 cut(s) 339, 612, 865
HpyF3I CTNAG 5 cut(s) 101, 137, 177, 499, 1016
HpySE526I ACGT 1 cut(s) 387
Hsp92I GRCGYC 4 cut(s) 387, 441, 954, 965
Hsp92II CATG 4 cut(s) 474, 865, 879, 898
HspAI GCGC 4 cut(s) 898, 900, 965, 1172
KasI GGCGCC 1 cut(s) 964
Kpn2I TCCGGA 1 cut(s) 154
KroI GCCGGC 2 cut(s) 1066, 1138
KroNI GCCGGC 2 cut(s) 1068, 1140
Kzo9I GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
LguI GCTCTTC 1 cut(s) 1148
LmnI GCTCC 5 cut(s) 157, 374, 964, 1000, 1169
Lsp1109I GCAGC 8 cut(s) 199, 214, 319, 323, 845, 1050, 1144, 1185
LweI GCATC 1 cut(s) 982
MaeI CTAG 1 cut(s) 165
MaeII ACGT 1 cut(s) 387
MaeIII GTNAC 2 cut(s) 568, 1180
MalI GATC 8 cut(s) 20, 53, 715, 736, 812, 1043, 1145, 1178
MbiI CCGCTC 1 cut(s) 959
MboI GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
MfeI CAATTG 1 cut(s) 340
MflI RGATCY 1 cut(s) 18
MhlI GDGCHC 3 cut(s) 254, 747, 1058
MlsI TGGCCA 1 cut(s) 807
MluCI AATT 4 cut(s) 141, 280, 340, 719
MluNI TGGCCA 1 cut(s) 807
Mly113I GGCGCC 1 cut(s) 965
MlyI GAGTC 4 cut(s) 32, 65, 469, 573
MmeI TCCRAC 3 cut(s) 396, 766, 1022
Mox20I TGGCCA 1 cut(s) 807
Mph1103I ATGCAT 1 cut(s) 867
MreI CGCCGGCG 1 cut(s) 1138
MroI TCCGGA 1 cut(s) 154
MroNI GCCGGC 2 cut(s) 1066, 1138
MroXI GAANNNNTTC 1 cut(s) 145
MscI TGGCCA 1 cut(s) 807
MseI TTAA 1 cut(s) 1203
Msp20I TGGCCA 1 cut(s) 807
MspA1I CMGCKG 3 cut(s) 227, 336, 1091
MspCI CTTAAG 1 cut(s) 1202
MspR9I CCNGG 1 cut(s) 64
MunI CAATTG 1 cut(s) 340
MvaI CCWGG 1 cut(s) 64
MvnI CGCG 3 cut(s) 97, 900, 1174
NaeI GCCGGC 2 cut(s) 1068, 1140
NarI GGCGCC 1 cut(s) 965
NcoI CCATGG 1 cut(s) 875
NdeII GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
NgoMIV GCCGGC 2 cut(s) 1066, 1138
NlaIII CATG 4 cut(s) 474, 865, 879, 898
NlaIV GGNNCC 4 cut(s) 153, 745, 966, 975
NmeAIII GCCGAG 4 cut(s) 53, 273, 570, 913
NmuCI GTSAC 2 cut(s) 568, 1180
NsiI ATGCAT 1 cut(s) 867
NspI RCATGY 2 cut(s) 865, 898
PaeI GCATGC 1 cut(s) 865
PaeR7I CTCGAG 1 cut(s) 1034
PauI GCGCGC 1 cut(s) 898
PceI AGGCCT 1 cut(s) 47
PciSI GCTCTTC 1 cut(s) 1148
PcsI WCGNNNNNNNCGW 3 cut(s) 384, 663, 819
PdiI GCCGGC 2 cut(s) 1068, 1140
PdmI GAANNNNTTC 1 cut(s) 145
PfeI GAWTC 4 cut(s) 410, 466, 535, 599
PinAI ACCGGT 1 cut(s) 82
Ple19I CGATCG 1 cut(s) 716
PleI GAGTC 4 cut(s) 32, 65, 468, 573
PluTI GGCGCC 1 cut(s) 968
PpsI GAGTC 4 cut(s) 32, 65, 468, 573
PpuMI RGGWCCY 1 cut(s) 973
Psp124BI GAGCTC 1 cut(s) 254
Psp5II RGGWCCY 1 cut(s) 973
Psp6I CCWGG 1 cut(s) 62
PspGI CCWGG 1 cut(s) 62
PspN4I GGNNCC 4 cut(s) 153, 745, 966, 975
PspOMI GGGCCC 1 cut(s) 743
PspPI GGNCC 4 cut(s) 743, 744, 796, 973
PspPPI RGGWCCY 1 cut(s) 973
PspXI VCTCGAGB 1 cut(s) 1034
PstNI CAGNNNCTG 1 cut(s) 847
PsuI RGATCY 1 cut(s) 18
PteI GCGCGC 1 cut(s) 898
PvuI CGATCG 1 cut(s) 716
RsaI GTAC 3 cut(s) 175, 776, 893
RsaNI GTAC 3 cut(s) 174, 775, 892
Rsr2I CGGWCCG 1 cut(s) 796
RsrII CGGWCCG 1 cut(s) 796
SacI GAGCTC 1 cut(s) 254
SalI GTCGAC 2 cut(s) 35, 68
SapI GCTCTTC 1 cut(s) 1148
SaqAI TTAA 1 cut(s) 1203
Sau3AI GATC 8 cut(s) 18, 51, 713, 734, 810, 1041, 1143, 1176
Sau96I GGNCC 4 cut(s) 743, 744, 796, 973
SchI GAGTC 4 cut(s) 32, 65, 469, 573
ScrFI CCNGG 1 cut(s) 64
SduI GDGCHC 3 cut(s) 254, 747, 1058
SfaNI GCATC 1 cut(s) 982
SfoI GGCGCC 1 cut(s) 966
Sfr274I CTCGAG 1 cut(s) 1034
SgrAI CRCCGGYG 1 cut(s) 1138
SinI GGWCC 2 cut(s) 796, 973
SlaI CTCGAG 1 cut(s) 1034
SmlI CTYRAG 2 cut(s) 1034, 1202
SmoI CTYRAG 2 cut(s) 1034, 1202
SphI GCATGC 1 cut(s) 865
Sse9I AATT 4 cut(s) 141, 280, 340, 719
SseBI AGGCCT 1 cut(s) 47
SspDI GGCGCC 1 cut(s) 964
SspMI CTAG 1 cut(s) 165
SstI GAGCTC 1 cut(s) 254
StuI AGGCCT 1 cut(s) 47
StyD4I CCNGG 1 cut(s) 62
StyI CCWWGG 1 cut(s) 875
TaaI ACNGT 2 cut(s) 800, 982
TaiI ACGT 1 cut(s) 390
TaqII GACCGA 2 cut(s) 1016, 1022
TasI AATT 4 cut(s) 141, 280, 340, 719
TatI WGTACW 1 cut(s) 891
TauI GCSGC 9 cut(s) 100, 227, 313, 316, 330, 438, 959, 1029, 1138
TfiI GAWTC 4 cut(s) 410, 466, 535, 599
Tru1I TTAA 1 cut(s) 1203
Tru9I TTAA 1 cut(s) 1203
TscAI CASTG 2 cut(s) 175, 745
TseFI GTSAC 2 cut(s) 568, 1180
TseI GCWGC 8 cut(s) 187, 227, 307, 336, 833, 1063, 1132, 1198
Tsp45I GTSAC 2 cut(s) 568, 1180
TspDTI ATGAA 2 cut(s) 29, 274
TspGWI ACGGA 3 cut(s) 228, 251, 591
TspRI CASTG 2 cut(s) 175, 745
Vha464I CTTAAG 1 cut(s) 1202
VpaK11BI GGWCC 2 cut(s) 796, 973
XapI RAATTY 3 cut(s) 141, 280, 719
XceI RCATGY 2 cut(s) 865, 898
XhoI CTCGAG 1 cut(s) 1034
XmiI GTMKAC 2 cut(s) 36, 69
XmnI GAANNNNTTC 1 cut(s) 145
XspI CTAG 1 cut(s) 165
ZraI GACGTC 1 cut(s) 388
Zsp2I ATGCAT 1 cut(s) 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.