Rroxscaffold_5G00335200

PDDEXK-like family of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0013897
Physical Location & Seq
Forward (+)
2640898 .. 2643085
2188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00335200.1

Sequence Viewer

Length: 1182 bp
ATGCCTTTTCCGATGAAGATCCAACCGATCGATATCGATTCCGAGGCAGTGAGAGAGCCGGTCCGGATCGACTCGGCTGCCAAGCCGGTGTTGAAATCCCGGCTCCGGCGACTGTTTGACCGGCAGTTCCCGAGCGTGCTTAGAATCTCCTCGACGGAAAAACCTGCCGTCGCCGGCGGCGATTTCAACAAGGACGGCGGAGGAGGAGGAGCTATCGCCGAGTTCGAGCCGAGCTCGGTTTGCCTTGCGAAGATGGTTCAGAATTTTCTCGAAGAAACCAACGAGAAGCAGCAGGCGACGAAATGTGGCCGGAATCGCTGCAATTGCTTTAACGGAAACAACAATGACAGCTCCGACGACGAGCTCGACGTCTTCGGCGGCGAGTCCATCACCACCGGCTGTTCCTTTGGCGGCGACGCCTCCGATATCCTCAAGAGTCTGATTCCATGCGCGAGTGTCCACGAGAGAAACCTCTTAGCCGACGCAGCCAAAATCGTCGAGACGAACAAGCATCTCAAACAGAAAGACGAGCTCAGAAAGATCGTCACCGATGGCCTCTCCTCCCTCGGCTACGACTCCTCCATCTGCAAATCCAAGTGGGACAAATCACCGTCTTTTCCTGCCGGTGAATATGAGTACATCGATGTGATGGTGGAGGGGGACAGGTTGTTGATTGACATCGATTTCCGATCGGAATTCGAAGTAGCGCGGCCCACTGGGGCCTACAAGGCAGTCCTTCAATCGCTGCCGTTCATTTTCGTCGGCAAATCGGACCGACTCGGGCAGATCGTTTCCATCGTAACGGATGCGGCGAAGCAGAGCCTGAAGAAGAAAGGAATGCCGTTTCCGCCGTGGCGGAAAGCCGAGTATGTCAGAGCTAAGTGGCTCTCTCCTTGCACAACCAGAACCACCACCTCGCAGCTTCGGAACGACGTCGTTGCTCCGGCGCCGGAGAATGGGACCGTCGTCGTTTCCGATGACCTGAGCGAGTGCGGAGAACTAGAGTTGATCTTCGGCGAGGACGCCGTGAATTTGACCGATCCGTCGCCGGAAGTTGAGGCGAAAGTGACCGGAAATTCAGTGGCGGTGGCGTGGCAGCCACCGGCGGTCAAGCCGAAGAGCGTTGAGAGAGGAGCGAGGATCGTGACTGGTTTGGCTTCGTTGCTAGCAGCAAAACCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PDDEXK_6

Protein Analysis

393

Amino Acids

42.69

Weight (kDa)

5.46

Isoelectric Point (pI)

45.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDDEXK_6 PF04720 84 - 300 5.6e-75 PDDEXK-like family of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013897)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22970 AT3G22970
fragaria_vesca FvH4_4g01830
malus_domestica MD13G1202800.v1.1
prunus_persica Prupe.1G024900_v2.0.a1
pyrus_communis pycom13g17580 pycom16g17110
rosa_chinensis RchiOBHm_Chr4g0388891
rosa_laevigata RLG00000010016
rosa_multiflora Rmu_sc0000697.1_g000004
rosa_roxburghii Rroxscaffold_5G00335200
rosa_rugosa Rorug03G0320800
rosa_samantha Rh4AG025300 Rh4BG018500 Rh4CG028300 Rh4DG019000
rosa_wichuraiana Rw4G001820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1042
AatII GACGTC 2 cut(s) 372, 936
Acc36I ACCTGC 1 cut(s) 172
AccB1I GGYRCC 1 cut(s) 946
AccII CGCG 2 cut(s) 452, 709
AccIII TCCGGA 1 cut(s) 63
AclWI GGATC 4 cut(s) 13, 74, 1034, 1148
AcoI YGGCCR 1 cut(s) 307
AcsI RAATTY 4 cut(s) 262, 695, 1030, 1075
AcuI CTGAAG 1 cut(s) 845
AcyI GRCGYC 5 cut(s) 369, 417, 933, 947, 1023
AfaI GTAC 1 cut(s) 638
AfiI CCNNNNNNNGG 2 cut(s) 105, 956
AgsI TTSAA 3 cut(s) 94, 187, 740
AluBI AGCT 7 cut(s) 212, 234, 351, 364, 532, 878, 922
AluI AGCT 7 cut(s) 212, 234, 351, 364, 532, 878, 922
Alw21I GWGCWC 3 cut(s) 236, 366, 534
Alw26I GTCTC 1 cut(s) 494
AlwI GGATC 4 cut(s) 13, 74, 1034, 1148
AlwNI CAGNNNCTG 1 cut(s) 823
Ama87I CYCGRG 2 cut(s) 130, 779
Aor13HI TCCGGA 1 cut(s) 63
AoxI GGCC 4 cut(s) 307, 553, 710, 720
ApeKI GCWGC 8 cut(s) 77, 289, 318, 485, 745, 919, 1096, 1169
ApoI RAATTY 4 cut(s) 262, 695, 1030, 1075
AspLEI GCGC 3 cut(s) 452, 709, 949
AspS9I GGNCC 5 cut(s) 61, 711, 720, 772, 960
AsuC2I CCSGG 1 cut(s) 100
AsuHPI GGTGA 4 cut(s) 382, 538, 600, 638
AsuII TTCGAA 1 cut(s) 699
AsuNHI GCTAGC 1 cut(s) 1165
AvaI CYCGRG 2 cut(s) 130, 779
AvaII GGWCC 3 cut(s) 61, 772, 960
BanI GGYRCC 1 cut(s) 946
BanII GRGCYC 3 cut(s) 236, 366, 534
BauI CACGAG 1 cut(s) 461
BbsI GAAGAC 1 cut(s) 364
Bbv12I GWGCWC 3 cut(s) 236, 366, 534
BbvI GCAGC 7 cut(s) 64, 301, 305, 497, 732, 931, 1108
BccI CCATC 6 cut(s) 247, 395, 545, 590, 643, 803
BceAI ACGGC 6 cut(s) 152, 211, 733, 826, 835, 1010
BcgI CGANNNNNNTGC 4 cut(s) 59, 93, 920, 954
BcnI CCSGG 1 cut(s) 100
BcoDI GTCTC 1 cut(s) 494
BfaI CTAG 2 cut(s) 1001, 1166
BfoI RGCGCY 1 cut(s) 950
BfuAI ACCTGC 1 cut(s) 172
BglI GCCNNNNNGGC 1 cut(s) 728
Bme1390I CCNGG 1 cut(s) 100
Bme18I GGWCC 3 cut(s) 61, 772, 960
BmeT110I CYCGRG 2 cut(s) 130, 779
BmgT120I GGNCC 5 cut(s) 61, 711, 720, 772, 960
BmiI GGNNCC 4 cut(s) 104, 721, 948, 961
BmrFI CCNGG 1 cut(s) 100
BmrI ACTGGG 1 cut(s) 726
BmsI GCATC 2 cut(s) 520, 796
BmtI GCTAGC 1 cut(s) 1169
BmuI ACTGGG 1 cut(s) 726
BoxI GACNNNNGTC 1 cut(s) 965
BpiI GAAGAC 1 cut(s) 364
BplI GAGNNNNNCTC 2 cut(s) 218, 250
Bpu10I CCTNAGC 1 cut(s) 983
Bpu14I TTCGAA 1 cut(s) 699
BpuEI CTTGAG 1 cut(s) 416
BpuMI CCSGG 1 cut(s) 100
Bsa29I ATCGAT 4 cut(s) 30, 36, 642, 681
BsaBI GATNNNNATC 3 cut(s) 17, 32, 677
BsaHI GRCGYC 5 cut(s) 369, 417, 933, 947, 1023
BsaJI CCNNGG 3 cut(s) 42, 565, 851
BsaWI WCCGGW 2 cut(s) 63, 1070
BsaXI ACNNNNNCTCC 2 cut(s) 563, 593
Bsc4I CCNNNNNNNGG 2 cut(s) 105, 956
Bse118I RCCGGY 7 cut(s) 58, 85, 120, 173, 395, 623, 1102
Bse1I ACTGG 2 cut(s) 721, 1153
Bse8I GATNNNNATC 3 cut(s) 17, 32, 677
BseAI TCCGGA 1 cut(s) 63
BseCI ATCGAT 4 cut(s) 30, 36, 642, 681
BseDI CCNNGG 3 cut(s) 42, 565, 851
BseGI GGATG 1 cut(s) 811
BseJI GATNNNNATC 3 cut(s) 17, 32, 677
BseLI CCNNNNNNNGG 2 cut(s) 105, 956
BseMII CTCAG 2 cut(s) 547, 974
BseNI ACTGG 2 cut(s) 721, 1153
BseRI GAGGAG 7 cut(s) 139, 216, 219, 222, 550, 568, 1146
BseXI GCAGC 7 cut(s) 64, 301, 305, 497, 732, 931, 1108
Bsh1236I CGCG 2 cut(s) 452, 709
Bsh1285I CGRYCG 2 cut(s) 30, 692
BshFI GGCC 4 cut(s) 309, 555, 712, 722
BshNI GGYRCC 1 cut(s) 946
BshVI ATCGAT 4 cut(s) 30, 36, 642, 681
BsiEI CGRYCG 2 cut(s) 30, 692
BsiHKAI GWGCWC 3 cut(s) 236, 366, 534
BsiHKCI CYCGRG 2 cut(s) 130, 779
BslFI GGGAC 3 cut(s) 614, 674, 973
BslI CCNNNNNNNGG 2 cut(s) 105, 956
BsmAI GTCTC 1 cut(s) 494
BsmBI CGTCTC 1 cut(s) 494
BsmFI GGGAC 3 cut(s) 614, 674, 973
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 4 cut(s) 309, 555, 712, 722
BsoBI CYCGRG 2 cut(s) 130, 779
Bsp119I TTCGAA 1 cut(s) 699
Bsp1286I GDGCHC 3 cut(s) 236, 366, 534
Bsp13I TCCGGA 1 cut(s) 63
Bsp143I GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
BspANI GGCC 4 cut(s) 309, 555, 712, 722
BspCNI CTCAG 2 cut(s) 546, 975
BspDI ATCGAT 4 cut(s) 30, 36, 642, 681
BspEI TCCGGA 1 cut(s) 63
BspFNI CGCG 2 cut(s) 452, 709
BspLI GGNNCC 4 cut(s) 104, 721, 948, 961
BspMI ACCTGC 1 cut(s) 172
BspOI GCTAGC 1 cut(s) 1169
BspPI GGATC 4 cut(s) 13, 74, 1034, 1148
BspQI GCTCTTC 1 cut(s) 1112
BspT104I TTCGAA 1 cut(s) 699
BspT107I GGYRCC 1 cut(s) 946
BsrFI RCCGGY 7 cut(s) 58, 85, 120, 173, 395, 623, 1102
BsrI ACTGG 2 cut(s) 721, 1153
BssAI RCCGGY 7 cut(s) 58, 85, 120, 173, 395, 623, 1102
BssECI CCNNGG 3 cut(s) 42, 565, 851
BssMI GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
BssNI GRCGYC 5 cut(s) 369, 417, 933, 947, 1023
BssSI CACGAG 1 cut(s) 461
Bst2BI CACGAG 1 cut(s) 461
Bst4CI ACNGT 4 cut(s) 114, 612, 964, 1179
Bst6I CTCTTC 1 cut(s) 1112
BstACI GRCGYC 5 cut(s) 369, 417, 933, 947, 1023
BstBI TTCGAA 1 cut(s) 699
BstC8I GCNNGC 4 cut(s) 137, 175, 294, 1167
BstDEI CTNAG 5 cut(s) 140, 475, 533, 879, 983
BstDSI CCRYGG 1 cut(s) 851
BstF5I GGATG 1 cut(s) 811
BstFNI CGCG 2 cut(s) 452, 709
BstH2I RGCGCY 1 cut(s) 950
BstHHI GCGC 3 cut(s) 452, 709, 949
BstKTI GATC 9 cut(s) 21, 30, 69, 543, 692, 789, 1011, 1042, 1143
BstMAI GTCTC 1 cut(s) 494
BstMBI GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
BstMCI CGRYCG 2 cut(s) 30, 692
BstMWI GCNNNNNNNGC 6 cut(s) 240, 315, 324, 485, 728, 847
BstPAI GACNNNNGTC 1 cut(s) 965
BstSCI CCNGG 1 cut(s) 98
BstUI CGCG 2 cut(s) 452, 709
BstV1I GCAGC 7 cut(s) 64, 301, 305, 497, 732, 931, 1108
BstV2I GAAGAC 1 cut(s) 364
BstX2I RGATCY 1 cut(s) 18
BstYI RGATCY 1 cut(s) 18
Bsu15I ATCGAT 4 cut(s) 30, 36, 642, 681
BsuRI GGCC 4 cut(s) 309, 555, 712, 722
BsuTUI ATCGAT 4 cut(s) 30, 36, 642, 681
BtgI CCRYGG 1 cut(s) 851
BtsCI GGATG 1 cut(s) 811
BtsI GCAGTG 1 cut(s) 54
BtsIMutI CAGTG 3 cut(s) 54, 714, 1086
BveI ACCTGC 1 cut(s) 172
Cac8I GCNNGC 4 cut(s) 137, 175, 294, 1167
CaiI CAGNNNCTG 1 cut(s) 823
CfoI GCGC 3 cut(s) 452, 709, 949
Cfr10I RCCGGY 7 cut(s) 58, 85, 120, 173, 395, 623, 1102
Cfr13I GGNCC 5 cut(s) 61, 711, 720, 772, 960
ClaI ATCGAT 4 cut(s) 30, 36, 642, 681
CpoI CGGWCCG 2 cut(s) 61, 772
CseI GACGC 3 cut(s) 425, 491, 1031
Csp6I GTAC 1 cut(s) 637
CspI CGGWCCG 2 cut(s) 61, 772
CviAII CATG 1 cut(s) 447
CviQI GTAC 1 cut(s) 637
DdeI CTNAG 5 cut(s) 140, 475, 533, 879, 983
DinI GGCGCC 1 cut(s) 948
DpnI GATC 9 cut(s) 20, 29, 68, 542, 691, 788, 1010, 1041, 1142
DpnII GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
DrdI GACNNNNNNGTC 1 cut(s) 1042
DseDI GACNNNNNNGTC 1 cut(s) 1042
EaeI YGGCCR 1 cut(s) 307
Eam1104I CTCTTC 1 cut(s) 1112
EarI CTCTTC 1 cut(s) 1112
EciI GGCGGA 3 cut(s) 213, 837, 871
Ecl136II GAGCTC 3 cut(s) 234, 364, 532
Eco24I GRGCYC 3 cut(s) 236, 366, 534
Eco32I GATATC 2 cut(s) 34, 427
Eco47I GGWCC 3 cut(s) 61, 772, 960
Eco53kI GAGCTC 3 cut(s) 234, 364, 532
Eco57I CTGAAG 1 cut(s) 845
Eco88I CYCGRG 2 cut(s) 130, 779
EcoICRI GAGCTC 3 cut(s) 234, 364, 532
EcoO109I RGGNCCY 1 cut(s) 720
EcoRI GAATTC 1 cut(s) 695
EcoRV GATATC 2 cut(s) 34, 427
EcoT38I GRGCYC 3 cut(s) 236, 366, 534
EgeI GGCGCC 1 cut(s) 948
EheI GGCGCC 1 cut(s) 948
Esp3I CGTCTC 1 cut(s) 494
FaeI CATG 1 cut(s) 450
FaiI YATR 3 cut(s) 448, 633, 870
FaqI GGGAC 3 cut(s) 614, 674, 973
FatI CATG 1 cut(s) 446
FokI GGATG 1 cut(s) 818
FriOI GRGCYC 3 cut(s) 236, 366, 534
FspBI CTAG 2 cut(s) 1001, 1166
GlaI GCGC 3 cut(s) 451, 708, 948
HaeII RGCGCY 1 cut(s) 950
HaeIII GGCC 4 cut(s) 309, 555, 712, 722
HgaI GACGC 3 cut(s) 425, 491, 1031
HhaI GCGC 3 cut(s) 452, 709, 949
Hin1I GRCGYC 5 cut(s) 369, 417, 933, 947, 1023
Hin1II CATG 1 cut(s) 450
Hin6I GCGC 3 cut(s) 450, 707, 947
HinP1I GCGC 3 cut(s) 450, 707, 947
HinfI GANTC 9 cut(s) 38, 71, 144, 313, 383, 436, 442, 575, 777
HphI GGTGA 4 cut(s) 382, 538, 600, 638
Hpy166II GTNNAC 1 cut(s) 460
Hpy188III TCNNGA 6 cut(s) 64, 130, 269, 433, 499, 1144
Hpy8I GTNNAC 1 cut(s) 460
HpyAV CCTTC 1 cut(s) 746
HpyCH4III ACNGT 4 cut(s) 114, 612, 964, 1179
HpyCH4IV ACGT 2 cut(s) 369, 933
HpyCH4V TGCA 3 cut(s) 321, 588, 897
HpyF10VI GCNNNNNNNGC 6 cut(s) 240, 315, 324, 485, 728, 847
HpyF3I CTNAG 5 cut(s) 140, 475, 533, 879, 983
HpySE526I ACGT 2 cut(s) 369, 933
Hsp92I GRCGYC 5 cut(s) 369, 417, 933, 947, 1023
Hsp92II CATG 1 cut(s) 450
HspAI GCGC 3 cut(s) 450, 707, 947
KasI GGCGCC 1 cut(s) 946
Kpn2I TCCGGA 1 cut(s) 63
KroI GCCGGC 1 cut(s) 173
KroNI GCCGGC 1 cut(s) 175
Kzo9I GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
LguI GCTCTTC 1 cut(s) 1112
LmnI GCTCC 5 cut(s) 108, 209, 356, 946, 1133
Lsp1109I GCAGC 7 cut(s) 64, 301, 305, 497, 732, 931, 1108
LweI GCATC 2 cut(s) 520, 796
MaeI CTAG 2 cut(s) 1001, 1166
MaeII ACGT 2 cut(s) 369, 933
MaeIII GTNAC 4 cut(s) 544, 799, 1066, 1144
MalI GATC 9 cut(s) 20, 29, 68, 542, 691, 788, 1010, 1041, 1142
MboI GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
MboII GAAGA 8 cut(s) 28, 262, 284, 364, 838, 841, 1003, 1129
MfeI CAATTG 1 cut(s) 322
MflI RGATCY 1 cut(s) 18
MhlI GDGCHC 3 cut(s) 236, 366, 534
MluCI AATT 5 cut(s) 262, 322, 695, 1030, 1075
Mly113I GGCGCC 1 cut(s) 947
MlyI GAGTC 5 cut(s) 65, 392, 445, 569, 771
MmeI TCCRAC 2 cut(s) 46, 378
MreI CGCCGGCG 1 cut(s) 173
MroI TCCGGA 1 cut(s) 63
MroNI GCCGGC 1 cut(s) 173
MseI TTAA 1 cut(s) 330
MslI CAYNNNNRTG 1 cut(s) 644
MspR9I CCNGG 1 cut(s) 100
MunI CAATTG 1 cut(s) 322
Mva1269I GAATGC 1 cut(s) 843
MvnI CGCG 2 cut(s) 452, 709
MwoI GCNNNNNNNGC 6 cut(s) 240, 315, 324, 485, 728, 847
NaeI GCCGGC 1 cut(s) 175
NarI GGCGCC 1 cut(s) 947
NciI CCSGG 1 cut(s) 100
NdeII GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
NgoMIV GCCGGC 1 cut(s) 173
NheI GCTAGC 1 cut(s) 1165
NlaIII CATG 1 cut(s) 450
NlaIV GGNNCC 4 cut(s) 104, 721, 948, 961
NmeAIII GCCGAG 5 cut(s) 53, 244, 255, 546, 889
NmuCI GTSAC 3 cut(s) 544, 1066, 1144
NspV TTCGAA 1 cut(s) 699
PciSI GCTCTTC 1 cut(s) 1112
PcsI WCGNNNNNNNCGW 8 cut(s) 177, 222, 363, 366, 786, 795, 809, 972
PctI GAATGC 1 cut(s) 843
PdiI GCCGGC 1 cut(s) 175
PfeI GAWTC 4 cut(s) 38, 144, 313, 442
Ple19I CGATCG 2 cut(s) 30, 692
PleI GAGTC 5 cut(s) 65, 391, 444, 569, 771
PluTI GGCGCC 1 cut(s) 950
PpsI GAGTC 5 cut(s) 65, 391, 444, 569, 771
PshAI GACNNNNGTC 1 cut(s) 965
Psp124BI GAGCTC 3 cut(s) 236, 366, 534
PspN4I GGNNCC 4 cut(s) 104, 721, 948, 961
PspPI GGNCC 5 cut(s) 61, 711, 720, 772, 960
PstNI CAGNNNCTG 1 cut(s) 823
PsuI RGATCY 1 cut(s) 18
PvuI CGATCG 2 cut(s) 30, 692
RsaI GTAC 1 cut(s) 638
RsaNI GTAC 1 cut(s) 637
RseI CAYNNNNRTG 1 cut(s) 644
Rsr2I CGGWCCG 2 cut(s) 61, 772
RsrII CGGWCCG 2 cut(s) 61, 772
SacI GAGCTC 3 cut(s) 236, 366, 534
SapI GCTCTTC 1 cut(s) 1112
SaqAI TTAA 1 cut(s) 330
Sau3AI GATC 9 cut(s) 18, 27, 66, 540, 689, 786, 1008, 1039, 1140
Sau96I GGNCC 5 cut(s) 61, 711, 720, 772, 960
SchI GAGTC 5 cut(s) 65, 392, 445, 569, 771
ScrFI CCNGG 1 cut(s) 100
SduI GDGCHC 3 cut(s) 236, 366, 534
SfaNI GCATC 2 cut(s) 520, 796
SfoI GGCGCC 1 cut(s) 948
SfuI TTCGAA 1 cut(s) 699
SgrAI CRCCGGYG 2 cut(s) 173, 1102
SinI GGWCC 3 cut(s) 61, 772, 960
SmiMI CAYNNNNRTG 1 cut(s) 644
SmlI CTYRAG 1 cut(s) 431
SmoI CTYRAG 1 cut(s) 431
Sse9I AATT 5 cut(s) 262, 322, 695, 1030, 1075
SspDI GGCGCC 1 cut(s) 946
SspMI CTAG 2 cut(s) 1001, 1166
SstI GAGCTC 3 cut(s) 236, 366, 534
StyD4I CCNGG 1 cut(s) 98
TaaI ACNGT 4 cut(s) 114, 612, 964, 1179
TaiI ACGT 2 cut(s) 372, 936
TaqII GACCGA 2 cut(s) 789, 1052
TasI AATT 5 cut(s) 262, 322, 695, 1030, 1075
TatI WGTACW 1 cut(s) 636
TauI GCSGC 5 cut(s) 180, 381, 414, 712, 812
TfiI GAWTC 4 cut(s) 38, 144, 313, 442
Tru1I TTAA 1 cut(s) 330
Tru9I TTAA 1 cut(s) 330
TscAI CASTG 3 cut(s) 54, 721, 1086
TseFI GTSAC 3 cut(s) 544, 1066, 1144
TseI GCWGC 8 cut(s) 77, 289, 318, 485, 745, 919, 1096, 1169
Tsp45I GTSAC 3 cut(s) 544, 1066, 1144
TspDTI ATGAA 2 cut(s) 29, 742
TspGWI ACGGA 4 cut(s) 170, 348, 818, 1032
TspRI CASTG 3 cut(s) 54, 721, 1086
VpaK11BI GGWCC 3 cut(s) 61, 772, 960
XapI RAATTY 4 cut(s) 262, 695, 1030, 1075
XspI CTAG 2 cut(s) 1001, 1166
ZraI GACGTC 2 cut(s) 370, 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.