Prupe.1G148700_v2.0.a1

glutamine synthetase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
11654710 .. 11658386
3677 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G148700.1

Sequence Viewer

Length: 1299 bp
ATGGCACAGATTTTGGCACCCACTTCACAATGGCAGATGAGAATTACAAAGAGCTCAACCACTGCTAGTCCTATGACAGCAAAGGTGTGGAGTTCTCTATTGTTGAAACAGAACAAGAGAGGACCAACCAAGAGCTCTGCTAAGTTTAGAGTGCTTGCCGTCAAGTCTGAAGGTTATACCATAAACAGGCTGGAGGGTTTACTGAATTTGGACCTTACTCCATTTACTGACAGGATTATTGCTGAGTACATTTGGATTGGAGGTTCAGGGGTTGATGTCCGTAGCAAGTCAAGGACAATATCAAAGCCTGTTGAACATCCGTCTGAGCTTCCCAAGTGGAACTATGATGGATCAAGTACCGGGCAAGCACCGGGTGAAGACAGTGAAGTAATCTTATACCCTCAAGCAATCTTTAAGGACCCTTTCCGCGGTGGCAACAATATATTGGTGATTTGTGATGCATACACACCACAAGGCGAGCCTATCCCAACAAACAAACGCGCTAGGGCTGCTGAGATTTTCGCAAACCAGAAGGTTATAGATGAAGTTCCATGGTATGGGATAGAGCAAGAGTACACATTACTTCAAACCGATGTGAAATGGCCTTTAGGTTGGCCAGTTGGAGGCTACCCTGGTCCTCAGGGTCCCTATTACTGTGGTGCTGGTGCAGACAAGTCATTTGGCCGTGACATTTCAGATGCTCATTACAAGGCTTGCCTGTATGCTGGAATTAACATCAGTGGGACCAATGGGGAGGTTATGCCTGGCCAGTGGGAGTATCAAGTTGGACCTAGTGTGGGAATCGAAGCTGGAGATCATATATGGGCTTCAAGATACATTCTTGAGAGAATCACTGAAGAAGCTGGTGTTGTTCTCACTCTTGATCCAAAACCAATAGAGGGTGACTGGAATGGTGCAGGATGCCACACCAATTACAGTACAAAGAGCATGAGGGAAGAAGGTGGCTTTGAAGTTATTAAGAAGGCAATTTTGAATCTGTCGCTTCGCCACACAGATCATATTAGTGCCTATGGAGAAGGAAATGAGAGACGGTTGACAGGAAAGCATGAAACAGCCAGCATTAACACATTTTCTTGGGGAGTGGCTAATCGTGGTTGCTCGATCCGTGTTGGTCGTGAAACTGAGAAGCAAGGAAAAGGTTATCTGGAGGATCGGCGCCCAGCTTCAAACATGGACCCTTACGTTGTGACCTCACTGCTGGCAGAAACTACATTATTGTGGGAGCCAACACTTGAGGCTGAAGCTCTTGCCGCTCAAAAGCTTGCATTGAATGTCTGA

Protein Analysis

433

Amino Acids

47.59

Weight (kDa)

6.06

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0009789)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 16, 1176
AccB7I CCANNNNNTGG 1 cut(s) 557
AccBSI CCGCTC 1 cut(s) 1274
AccII CGCG 2 cut(s) 429, 501
AciI CCGC 3 cut(s) 427, 429, 1272
AclWI GGATC 4 cut(s) 358, 878, 1117, 1179
AcoI YGGCCR 3 cut(s) 614, 682, 766
AcsI RAATTY 1 cut(s) 205
AcuI CTGAAG 3 cut(s) 189, 876, 1281
AcyI GRCGYC 1 cut(s) 1177
AdeI CACNNNGTG 1 cut(s) 374
AfaI GTAC 4 cut(s) 248, 358, 575, 940
AfiI CCNNNNNNNGG 6 cut(s) 186, 428, 557, 623, 797, 899
AgsI TTSAA 8 cut(s) 106, 314, 587, 831, 971, 994, 1188, 1291
AjnI CCWGG 2 cut(s) 631, 763
AloI GAACNNNNNNTCC 2 cut(s) 247, 279
AluBI AGCT 8 cut(s) 54, 135, 328, 809, 863, 1184, 1265, 1282
AluI AGCT 8 cut(s) 54, 135, 328, 809, 863, 1184, 1265, 1282
Alw21I GWGCWC 2 cut(s) 56, 137
Alw26I GTCTC 1 cut(s) 1042
AlwI GGATC 4 cut(s) 358, 878, 1117, 1179
AoxI GGCC 4 cut(s) 602, 614, 682, 766
ApeKI GCWGC 1 cut(s) 509
ApoI RAATTY 1 cut(s) 205
ArsI GACNNNNNNTTYG 2 cut(s) 662, 694
AspLEI GCGC 2 cut(s) 503, 1179
AspS9I GGNCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
AsuC2I CCSGG 2 cut(s) 361, 372
AsuHPI GGTGA 3 cut(s) 386, 460, 914
AvaII GGWCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
AxyI CCTNAGG 1 cut(s) 639
BalI TGGCCA 2 cut(s) 616, 768
BanI GGYRCC 2 cut(s) 16, 1176
BanII GRGCYC 2 cut(s) 56, 137
BbsI GAAGAC 1 cut(s) 384
Bbv12I GWGCWC 2 cut(s) 56, 137
BbvI GCAGC 1 cut(s) 496
BccI CCATC 1 cut(s) 341
BceAI ACGGC 2 cut(s) 143, 669
BciT130I CCWGG 2 cut(s) 633, 765
BcnI CCSGG 2 cut(s) 361, 372
BcoDI GTCTC 1 cut(s) 1042
BfaI CTAG 3 cut(s) 66, 504, 792
BfoI RGCGCY 1 cut(s) 1180
BisI GCNGC 2 cut(s) 510, 1272
BlsI GCNGC 2 cut(s) 511, 1273
Bme1390I CCNGG 4 cut(s) 361, 372, 633, 765
Bme18I GGWCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
BmgT120I GGNCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
BmiI GGNNCC 8 cut(s) 18, 420, 645, 646, 745, 1178, 1197, 1245
BmrFI CCNGG 4 cut(s) 361, 372, 633, 765
BmsI GCATC 3 cut(s) 448, 688, 911
BpiI GAAGAC 1 cut(s) 384
BpmI CTGGAG 3 cut(s) 212, 831, 1187
BpuEI CTTGAG 3 cut(s) 387, 863, 1274
BpuMI CCSGG 2 cut(s) 361, 372
BsaHI GRCGYC 1 cut(s) 1177
BsaJI CCNNGG 3 cut(s) 427, 551, 631
Bsc4I CCNNNNNNNGG 6 cut(s) 186, 428, 557, 623, 797, 899
Bse1I ACTGG 3 cut(s) 617, 769, 911
Bse21I CCTNAGG 1 cut(s) 639
BseBI CCWGG 2 cut(s) 633, 765
BseDI CCNNGG 3 cut(s) 427, 551, 631
BseGI GGATG 2 cut(s) 316, 926
BseLI CCNNNNNNNGG 6 cut(s) 186, 428, 557, 623, 797, 899
BseMII CTCAG 5 cut(s) 234, 315, 504, 653, 1134
BseNI ACTGG 3 cut(s) 617, 769, 911
BseXI GCAGC 1 cut(s) 496
BseYI CCCAGC 1 cut(s) 1180
BsgI GTGCAG 2 cut(s) 687, 936
Bsh1236I CGCG 2 cut(s) 429, 501
BshFI GGCC 4 cut(s) 604, 616, 684, 768
BshNI GGYRCC 2 cut(s) 16, 1176
BsiHKAI GWGCWC 2 cut(s) 56, 137
BsiSI CCGG 2 cut(s) 360, 371
BslFI GGGAC 2 cut(s) 630, 757
BslI CCNNNNNNNGG 6 cut(s) 186, 428, 557, 623, 797, 899
BsmAI GTCTC 1 cut(s) 1042
BsmBI CGTCTC 1 cut(s) 1042
BsmFI GGGAC 2 cut(s) 630, 757
BsnI GGCC 4 cut(s) 604, 616, 684, 768
Bsp1286I GDGCHC 2 cut(s) 56, 137
Bsp143I GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
Bsp19I CCATGG 1 cut(s) 551
BspACI CCGC 3 cut(s) 427, 429, 1272
BspANI GGCC 4 cut(s) 604, 616, 684, 768
BspCNI CTCAG 5 cut(s) 235, 316, 505, 652, 1135
BspFNI CGCG 2 cut(s) 429, 501
BspLI GGNNCC 8 cut(s) 18, 420, 645, 646, 745, 1178, 1197, 1245
BspPI GGATC 4 cut(s) 358, 878, 1117, 1179
BspT107I GGYRCC 2 cut(s) 16, 1176
BsrBI CCGCTC 1 cut(s) 1274
BsrI ACTGG 3 cut(s) 617, 769, 911
BssECI CCNNGG 3 cut(s) 427, 551, 631
BssMI GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
BssNI GRCGYC 1 cut(s) 1177
BssT1I CCWWGG 1 cut(s) 551
Bst2UI CCWGG 2 cut(s) 633, 765
Bst4CI ACNGT 4 cut(s) 383, 656, 938, 1053
BstACI GRCGYC 1 cut(s) 1177
BstC8I GCNNGC 7 cut(s) 156, 366, 479, 715, 1078, 1221, 1284
BstDEI CTNAG 6 cut(s) 141, 243, 324, 513, 639, 1143
BstDSI CCRYGG 2 cut(s) 427, 551
BstF5I GGATG 2 cut(s) 316, 926
BstFNI CGCG 2 cut(s) 429, 501
BstH2I RGCGCY 1 cut(s) 1180
BstHHI GCGC 2 cut(s) 503, 1179
BstKTI GATC 6 cut(s) 353, 817, 886, 1018, 1125, 1174
BstMAI GTCTC 1 cut(s) 1042
BstMBI GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
BstMWI GCNNNNNNNGC 2 cut(s) 509, 1271
BstNI CCWGG 2 cut(s) 633, 765
BstSCI CCNGG 4 cut(s) 359, 370, 631, 763
BstUI CGCG 2 cut(s) 429, 501
BstV1I GCAGC 1 cut(s) 496
BstV2I GAAGAC 1 cut(s) 384
Bsu36I CCTNAGG 1 cut(s) 639
BsuRI GGCC 4 cut(s) 604, 616, 684, 768
BtgI CCRYGG 2 cut(s) 427, 551
BtsCI GGATG 2 cut(s) 316, 926
BtsI GCAGTG 2 cut(s) 60, 1214
BtsIMutI CAGTG 6 cut(s) 60, 388, 745, 776, 852, 1214
Cac8I GCNNGC 7 cut(s) 156, 366, 479, 715, 1078, 1221, 1284
CfoI GCGC 2 cut(s) 503, 1179
Cfr13I GGNCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
Cfr42I CCGCGG 1 cut(s) 430
Csp6I GTAC 4 cut(s) 247, 357, 574, 939
CviAII CATG 4 cut(s) 552, 949, 1067, 1192
CviQI GTAC 4 cut(s) 247, 357, 574, 939
DdeI CTNAG 6 cut(s) 141, 243, 324, 513, 639, 1143
DinI GGCGCC 1 cut(s) 1178
DpnI GATC 6 cut(s) 352, 816, 885, 1017, 1124, 1173
DpnII GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
DraIII CACNNNGTG 1 cut(s) 374
EaeI YGGCCR 3 cut(s) 614, 682, 766
Ecl136II GAGCTC 2 cut(s) 54, 135
Eco130I CCWWGG 1 cut(s) 551
Eco24I GRGCYC 2 cut(s) 56, 137
Eco47I GGWCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
Eco53kI GAGCTC 2 cut(s) 54, 135
Eco57I CTGAAG 3 cut(s) 189, 876, 1281
Eco81I CCTNAGG 1 cut(s) 639
EcoICRI GAGCTC 2 cut(s) 54, 135
EcoO109I RGGNCCY 2 cut(s) 418, 644
EcoRII CCWGG 2 cut(s) 631, 763
EcoT14I CCWWGG 1 cut(s) 551
EcoT22I ATGCAT 1 cut(s) 463
EcoT38I GRGCYC 2 cut(s) 56, 137
EgeI GGCGCC 1 cut(s) 1178
EheI GGCGCC 1 cut(s) 1178
ErhI CCWWGG 1 cut(s) 551
Esp3I CGTCTC 1 cut(s) 1042
FaeI CATG 4 cut(s) 555, 952, 1070, 1195
FaqI GGGAC 2 cut(s) 630, 757
FatI CATG 4 cut(s) 551, 948, 1066, 1191
Fnu4HI GCNGC 2 cut(s) 510, 1272
FokI GGATG 2 cut(s) 303, 933
FriOI GRGCYC 2 cut(s) 56, 137
Fsp4HI GCNGC 2 cut(s) 510, 1272
FspBI CTAG 3 cut(s) 66, 504, 792
GlaI GCGC 2 cut(s) 502, 1178
GluI GCNGC 2 cut(s) 510, 1272
GsaI CCCAGC 1 cut(s) 1184
GsuI CTGGAG 3 cut(s) 212, 831, 1187
HaeII RGCGCY 1 cut(s) 1180
HaeIII GGCC 4 cut(s) 604, 616, 684, 768
HapII CCGG 2 cut(s) 360, 371
HhaI GCGC 2 cut(s) 503, 1179
Hin1I GRCGYC 1 cut(s) 1177
Hin1II CATG 4 cut(s) 555, 952, 1070, 1195
Hin6I GCGC 2 cut(s) 501, 1177
HinP1I GCGC 2 cut(s) 501, 1177
HincII GTYRAC 1 cut(s) 1056
HindII GTYRAC 1 cut(s) 1056
HindIII AAGCTT 1 cut(s) 1280
HinfI GANTC 3 cut(s) 801, 849, 994
HpaII CCGG 2 cut(s) 360, 371
HphI GGTGA 3 cut(s) 386, 460, 914
Hpy166II GTNNAC 3 cut(s) 200, 576, 1056
Hpy188I TCNGA 4 cut(s) 169, 325, 697, 1298
Hpy188III TCNNGA 5 cut(s) 831, 842, 881, 1136, 1166
Hpy8I GTNNAC 3 cut(s) 200, 576, 1056
HpyAV CCTTC 5 cut(s) 164, 526, 953, 976, 1031
HpyCH4III ACNGT 4 cut(s) 383, 656, 938, 1053
HpyCH4IV ACGT 1 cut(s) 1203
HpyCH4V TGCA 4 cut(s) 461, 668, 917, 1286
HpyF10VI GCNNNNNNNGC 2 cut(s) 509, 1271
HpyF3I CTNAG 6 cut(s) 141, 243, 324, 513, 639, 1143
HpySE526I ACGT 1 cut(s) 1203
Hsp92I GRCGYC 1 cut(s) 1177
Hsp92II CATG 4 cut(s) 555, 952, 1070, 1195
HspAI GCGC 2 cut(s) 501, 1177
KasI GGCGCC 1 cut(s) 1176
KflI GGGWCCC 1 cut(s) 644
KspI CCGCGG 1 cut(s) 430
Kzo9I GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
LmnI GCTCC 1 cut(s) 1243
Lsp1109I GCAGC 1 cut(s) 496
LweI GCATC 3 cut(s) 448, 688, 911
MaeI CTAG 3 cut(s) 66, 504, 792
MaeII ACGT 1 cut(s) 1203
MaeIII GTNAC 3 cut(s) 686, 902, 1207
MalI GATC 6 cut(s) 352, 816, 885, 1017, 1124, 1173
MbiI CCGCTC 1 cut(s) 1274
MboI GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
MboII GAAGA 3 cut(s) 389, 869, 968
MhlI GDGCHC 2 cut(s) 56, 137
MlsI TGGCCA 2 cut(s) 616, 768
MluCI AATT 5 cut(s) 42, 205, 729, 931, 987
MluNI TGGCCA 2 cut(s) 616, 768
Mly113I GGCGCC 1 cut(s) 1177
MmeI TCCRAC 2 cut(s) 601, 766
Mox20I TGGCCA 2 cut(s) 616, 768
Mph1103I ATGCAT 1 cut(s) 463
MscI TGGCCA 2 cut(s) 616, 768
MseI TTAA 4 cut(s) 414, 732, 978, 1083
MslI CAYNNNNRTG 2 cut(s) 1023, 1237
Msp20I TGGCCA 2 cut(s) 616, 768
MspA1I CMGCKG 1 cut(s) 429
MspI CCGG 2 cut(s) 360, 371
MspR9I CCNGG 4 cut(s) 361, 372, 633, 765
MvaI CCWGG 2 cut(s) 633, 765
MvnI CGCG 2 cut(s) 429, 501
MwoI GCNNNNNNNGC 2 cut(s) 509, 1271
NarI GGCGCC 1 cut(s) 1177
NciI CCSGG 2 cut(s) 361, 372
NcoI CCATGG 1 cut(s) 551
NdeII GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
NlaIII CATG 4 cut(s) 555, 952, 1070, 1195
NlaIV GGNNCC 8 cut(s) 18, 420, 645, 646, 745, 1178, 1197, 1245
NmuCI GTSAC 3 cut(s) 686, 902, 1207
NsiI ATGCAT 1 cut(s) 463
PfeI GAWTC 3 cut(s) 801, 849, 994
PflMI CCANNNNNTGG 1 cut(s) 557
PkrI GCNGC 2 cut(s) 511, 1273
PluTI GGCGCC 1 cut(s) 1180
PpuMI RGGWCCY 2 cut(s) 418, 644
Psp124BI GAGCTC 2 cut(s) 56, 137
Psp5II RGGWCCY 2 cut(s) 418, 644
Psp6I CCWGG 2 cut(s) 631, 763
PspFI CCCAGC 1 cut(s) 1180
PspGI CCWGG 2 cut(s) 631, 763
PspN4I GGNNCC 8 cut(s) 18, 420, 645, 646, 745, 1178, 1197, 1245
PspPI GGNCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
PspPPI RGGWCCY 2 cut(s) 418, 644
RsaI GTAC 4 cut(s) 248, 358, 575, 940
RsaNI GTAC 4 cut(s) 247, 357, 574, 939
RseI CAYNNNNRTG 2 cut(s) 1023, 1237
SacI GAGCTC 2 cut(s) 56, 137
SacII CCGCGG 1 cut(s) 430
SaqAI TTAA 4 cut(s) 414, 732, 978, 1083
SatI GCNGC 2 cut(s) 510, 1272
Sau3AI GATC 6 cut(s) 350, 814, 883, 1015, 1122, 1171
Sau96I GGNCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
ScrFI CCNGG 4 cut(s) 361, 372, 633, 765
SduI GDGCHC 2 cut(s) 56, 137
SfaNI GCATC 3 cut(s) 448, 688, 911
SfoI GGCGCC 1 cut(s) 1178
Sfr303I CCGCGG 1 cut(s) 430
SgrBI CCGCGG 1 cut(s) 430
SinI GGWCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
SmiMI CAYNNNNRTG 2 cut(s) 1023, 1237
SmlI CTYRAG 3 cut(s) 402, 842, 1253
SmoI CTYRAG 3 cut(s) 402, 842, 1253
Sse9I AATT 5 cut(s) 42, 205, 729, 931, 987
SsiI CCGC 3 cut(s) 427, 429, 1272
SspDI GGCGCC 1 cut(s) 1176
SspMI CTAG 3 cut(s) 66, 504, 792
SstI GAGCTC 2 cut(s) 56, 137
StyD4I CCNGG 4 cut(s) 359, 370, 631, 763
StyI CCWWGG 1 cut(s) 551
TaaI ACNGT 4 cut(s) 383, 656, 938, 1053
TaiI ACGT 1 cut(s) 1206
TaqI TCGA 2 cut(s) 804, 1121
TasI AATT 5 cut(s) 42, 205, 729, 931, 987
TatI WGTACW 3 cut(s) 246, 573, 938
TauI GCSGC 1 cut(s) 1274
TfiI GAWTC 3 cut(s) 801, 849, 994
Tru1I TTAA 4 cut(s) 414, 732, 978, 1083
Tru9I TTAA 4 cut(s) 414, 732, 978, 1083
TscAI CASTG 6 cut(s) 67, 388, 745, 776, 859, 1221
TseFI GTSAC 3 cut(s) 686, 902, 1207
TseI GCWGC 1 cut(s) 509
Tsp45I GTSAC 3 cut(s) 686, 902, 1207
TspDTI ATGAA 2 cut(s) 558, 1083
TspGWI ACGGA 3 cut(s) 269, 309, 1115
TspRI CASTG 6 cut(s) 67, 388, 745, 776, 859, 1221
Van91I CCANNNNNTGG 1 cut(s) 557
VpaK11BI GGWCC 8 cut(s) 122, 211, 418, 635, 644, 744, 788, 1195
XapI RAATTY 1 cut(s) 205
XcmI CCANNNNNNNNNTGG 1 cut(s) 187
XspI CTAG 3 cut(s) 66, 504, 792
Zsp2I ATGCAT 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.