Prupe.1G177700_v2.0.a1

histone-lysine N-methyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0016213
Physical Location & Seq
Reverse (-)
15200790 .. 15201684
895 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G177700.1

Sequence Viewer

Length: 411 bp
ATGCATTGCCAAACAGCTTTCAAGCTTCTTCTCTGGACTTCTCTTACATTTGCATCTCTTATCCCCCATGGTCTCTCTCTCTCCCAAAAAAGAAAAGGGTGGGGAGAAAAATGTACTGCCAATGGTCAAGCTCCAACAGTTCAACAGATCCAAGTGGGGTTTGGAAGCTCTCCAAAGTTCATGGTGGTGGTGAATAACAAGTGCCCTATGTGCCCAATCATCGACGTTCATTTGAAGTGTGGAAGCTTCCCTCAGGCTCTGGTCAACCCGAGGCTGCTCAAAGTGCTAGGCGTCGATGATTGTGTTATTAACAGCGGGTTGCCATTGGCACCTCTGCAGACATTTTCCTTCAATTACTCTCACCAAAAGTATCTCATGTATCCAAAAATCTGGTCCTTTCAATGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

137

Amino Acids

15.16

Weight (kDa)

9.19

Isoelectric Point (pI)

32.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016213)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05835
fragaria_vesca FvH4_4g12240
malus_domestica MD04G1028300.v1.1
prunus_persica Prupe.1G177700_v2.0.a1 Prupe.1G177700_v2.0.a1
pyrus_communis pycom04g02490
rosa_chinensis RchiOBHm_Chr4g0409991
rosa_laevigata RLG00000008507
rosa_multiflora Rmu_sc0000365.1_g000085
rosa_roxburghii Rroxscaffold_5G00354510
rosa_rugosa Rorug04G0100600
rosa_samantha Rh4AG158900 Rh4CG169900 Rh4DG153900
rosa_wichuraiana Rw4G013130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 328
AciI CCGC 1 cut(s) 315
AclWI GGATC 1 cut(s) 142
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 1 cut(s) 115
AgsI TTSAA 5 cut(s) 22, 143, 235, 352, 401
AluBI AGCT 5 cut(s) 17, 25, 131, 168, 246
AluI AGCT 5 cut(s) 17, 25, 131, 168, 246
Alw26I GTCTC 1 cut(s) 77
AlwI GGATC 1 cut(s) 142
AlwNI CAGNNNCTG 1 cut(s) 259
Ama87I CYCGRG 1 cut(s) 268
ApeKI GCWGC 1 cut(s) 274
ArsI GACNNNNNNTTYG 2 cut(s) 377, 409
AspS9I GGNCC 1 cut(s) 393
AsuHPI GGTGA 2 cut(s) 202, 353
AvaI CYCGRG 1 cut(s) 268
AvaII GGWCC 1 cut(s) 393
AxyI CCTNAGG 1 cut(s) 252
BaeGI GKGCMC 2 cut(s) 206, 215
BanI GGYRCC 1 cut(s) 328
BbvI GCAGC 1 cut(s) 261
BciVI GTATCC 1 cut(s) 390
BcoDI GTCTC 1 cut(s) 77
BfaI CTAG 1 cut(s) 287
BfmI CTRYAG 1 cut(s) 335
BfuI GTATCC 1 cut(s) 390
BisI GCNGC 1 cut(s) 275
BlsI GCNGC 1 cut(s) 276
Bme18I GGWCC 1 cut(s) 393
BmeT110I CYCGRG 1 cut(s) 268
BmgT120I GGNCC 1 cut(s) 393
BmiI GGNNCC 1 cut(s) 330
BmsI GCATC 1 cut(s) 62
BsaHI GRCGYC 1 cut(s) 291
BsaI GGTCTC 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 67, 269
Bse21I CCTNAGG 1 cut(s) 252
Bse3DI GCAATG 1 cut(s) 4
BseDI CCNNGG 2 cut(s) 67, 269
BseMI GCAATG 1 cut(s) 4
BseMII CTCAG 1 cut(s) 266
BseSI GKGCMC 2 cut(s) 206, 215
BseXI GCAGC 1 cut(s) 261
BshNI GGYRCC 1 cut(s) 328
BsiHKCI CYCGRG 1 cut(s) 268
BsmAI GTCTC 1 cut(s) 77
Bso31I GGTCTC 1 cut(s) 77
BsoBI CYCGRG 1 cut(s) 268
Bsp1286I GDGCHC 2 cut(s) 206, 215
Bsp143I GATC 1 cut(s) 147
Bsp19I CCATGG 1 cut(s) 67
BspACI CCGC 1 cut(s) 315
BspCNI CTCAG 1 cut(s) 265
BspLI GGNNCC 1 cut(s) 330
BspMAI CTGCAG 1 cut(s) 339
BspPI GGATC 1 cut(s) 142
BspT107I GGYRCC 1 cut(s) 328
BspTNI GGTCTC 1 cut(s) 77
BsrDI GCAATG 1 cut(s) 4
BssECI CCNNGG 2 cut(s) 67, 269
BssMI GATC 1 cut(s) 147
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 1 cut(s) 67
Bst4CI ACNGT 1 cut(s) 139
BstACI GRCGYC 1 cut(s) 291
BstDEI CTNAG 1 cut(s) 252
BstDSI CCRYGG 1 cut(s) 67
BstKTI GATC 1 cut(s) 150
BstMAI GTCTC 1 cut(s) 77
BstMBI GATC 1 cut(s) 147
BstMWI GCNNNNNNNGC 2 cut(s) 210, 283
BstSFI CTRYAG 1 cut(s) 335
BstSLI GKGCMC 2 cut(s) 206, 215
BstV1I GCAGC 1 cut(s) 261
BstX2I RGATCY 1 cut(s) 147
BstXI CCANNNNNNTGG 1 cut(s) 390
BstYI RGATCY 1 cut(s) 147
Bsu36I CCTNAGG 1 cut(s) 252
BsuI GTATCC 1 cut(s) 390
BtgI CCRYGG 1 cut(s) 67
CaiI CAGNNNCTG 1 cut(s) 259
Cfr13I GGNCC 1 cut(s) 393
CseI GACGC 1 cut(s) 280
Csp6I GTAC 1 cut(s) 114
CviAII CATG 3 cut(s) 68, 181, 376
CviJI RGCY 7 cut(s) 17, 25, 131, 168, 246, 257, 274
CviKI_1 RGCY 7 cut(s) 17, 25, 131, 168, 246, 257, 274
CviQI GTAC 1 cut(s) 114
DdeI CTNAG 1 cut(s) 252
DpnI GATC 1 cut(s) 149
DpnII GATC 1 cut(s) 147
Eco130I CCWWGG 1 cut(s) 67
Eco31I GGTCTC 1 cut(s) 77
Eco47I GGWCC 1 cut(s) 393
Eco81I CCTNAGG 1 cut(s) 252
Eco88I CYCGRG 1 cut(s) 268
EcoT14I CCWWGG 1 cut(s) 67
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 67
FaeI CATG 3 cut(s) 71, 184, 379
FaiI YATR 4 cut(s) 69, 182, 209, 377
FatI CATG 3 cut(s) 67, 180, 375
FauI CCCGC 1 cut(s) 308
Fnu4HI GCNGC 1 cut(s) 275
Fsp4HI GCNGC 1 cut(s) 275
FspBI CTAG 1 cut(s) 287
GluI GCNGC 1 cut(s) 275
HgaI GACGC 1 cut(s) 280
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 3 cut(s) 71, 184, 379
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HindIII AAGCTT 2 cut(s) 23, 244
HphI GGTGA 2 cut(s) 202, 353
Hpy166II GTNNAC 1 cut(s) 265
Hpy188III TCNNGA 1 cut(s) 34
Hpy8I GTNNAC 1 cut(s) 265
Hpy99I CGWCG 2 cut(s) 227, 296
HpyAV CCTTC 1 cut(s) 358
HpyCH4III ACNGT 1 cut(s) 139
HpyCH4IV ACGT 1 cut(s) 225
HpyCH4V TGCA 3 cut(s) 4, 53, 337
HpyF10VI GCNNNNNNNGC 2 cut(s) 210, 283
HpyF3I CTNAG 1 cut(s) 252
HpySE526I ACGT 1 cut(s) 225
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 3 cut(s) 71, 184, 379
Kzo9I GATC 1 cut(s) 147
LmnI GCTCC 1 cut(s) 136
LpnPI CCDG 4 cut(s) 19, 239, 245, 376
Lsp1109I GCAGC 1 cut(s) 261
LweI GCATC 1 cut(s) 62
MaeI CTAG 1 cut(s) 287
MaeII ACGT 1 cut(s) 225
MalI GATC 1 cut(s) 149
MboI GATC 1 cut(s) 147
MboII GAAGA 1 cut(s) 20
MflI RGATCY 1 cut(s) 147
MhlI GDGCHC 2 cut(s) 206, 215
MluCI AATT 1 cut(s) 352
MmeI TCCRAC 1 cut(s) 158
MnlI CCTC 3 cut(s) 261, 264, 342
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 309
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 1 cut(s) 315
MwoI GCNNNNNNNGC 2 cut(s) 210, 283
NcoI CCATGG 1 cut(s) 67
NdeII GATC 1 cut(s) 147
NlaIII CATG 3 cut(s) 71, 184, 379
NlaIV GGNNCC 1 cut(s) 330
NsiI ATGCAT 1 cut(s) 6
PkrI GCNGC 1 cut(s) 276
PspN4I GGNNCC 1 cut(s) 330
PspPI GGNCC 1 cut(s) 393
PstI CTGCAG 1 cut(s) 339
PstNI CAGNNNCTG 1 cut(s) 259
PsuI RGATCY 1 cut(s) 147
RsaI GTAC 1 cut(s) 115
RsaNI GTAC 1 cut(s) 114
RseI CAYNNNNRTG 1 cut(s) 185
SaqAI TTAA 1 cut(s) 309
SatI GCNGC 1 cut(s) 275
Sau3AI GATC 1 cut(s) 147
Sau96I GGNCC 1 cut(s) 393
SduI GDGCHC 2 cut(s) 206, 215
SetI ASST 7 cut(s) 19, 27, 133, 170, 228, 248, 334
SfaNI GCATC 1 cut(s) 62
SfcI CTRYAG 1 cut(s) 335
SinI GGWCC 1 cut(s) 393
SmiMI CAYNNNNRTG 1 cut(s) 185
Sse9I AATT 1 cut(s) 352
SsiI CCGC 1 cut(s) 315
SspMI CTAG 1 cut(s) 287
StyI CCWWGG 1 cut(s) 67
TaaI ACNGT 1 cut(s) 139
TaiI ACGT 1 cut(s) 228
TaqI TCGA 2 cut(s) 222, 294
TasI AATT 1 cut(s) 352
TatI WGTACW 1 cut(s) 113
Tru1I TTAA 1 cut(s) 309
Tru9I TTAA 1 cut(s) 309
TseI GCWGC 1 cut(s) 274
TspDTI ATGAA 2 cut(s) 169, 218
VpaK11BI GGWCC 1 cut(s) 393
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
XspI CTAG 1 cut(s) 287
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.