Prupe.1G203700_v2.0.a1

Introduction of a cis double bond between carbons of the acyl chain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014984
Physical Location & Seq
Forward (+)
20287442 .. 20289443
2002 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G203700.1

Sequence Viewer

Length: 1179 bp
ATGTTGATCACCAGCTGCCTCACATCTCCCAAGTTCTTCACGGCCTCATCCAACCCTGCACCTTCAAAAGATCTGAAGGTTGATGAGAAGATTAATAGGGATTACAGTTACAAGAAGGCTTTTATGCCACGGCGAGAGTTGCTTTATCAAGAAATCACTCATTCCATGTCACCTGAAAAAATTAGCATCTTTAAATCCCTAGACGACTGGGCTGAGGACAACATCTTGACTCACTTGAAACCTGTTGAAAAGTGCTGGCAACCTCAAGATTTTCTGCCTGATCCAGCGGCTTCCCGAGATGACGGTTTTCTTGAGCAAGTCAAGGAACTGAGGGAGAGGGCAAAGGAGGTTCCAGATGATTTCTTTGTTGTTTTGGTGGGAAATATGATCACTGAGGACGCCCTTCCCACTTACCAAACAATGCTCAACACTTTGGATGGAGTTGCAGATGAAACAGGTTCAAGCCCTACTTCTTGGGCAGTCTGGACCAGGGCCTGGACTGCTGAAGAGAAAAGGCATGGTGACCTTCTTAATAAGTATCTCTATCTCACCGGACGAGTCGACATGTCCCAAATTGAGAAGACCATTCAGTATTTGATTACTTTTGGAATGGATCCCGGGGGAGAGAACAATCCCTACTTGGGGTTCATATTCACTTCATTCCAGGAAAGGGCTACCGCTATCTCTCATGGGAACACTGCCAAACTTGCCAAGAAGCATGGGGACTTGAAGTTGGCACAAATATGCGGCATAATAGCCTCAGATGAGAAGCGCCATGAGGCTGCCTACACCAAGATTGTGACCAAGCTCTTTGAGTTGGATCCTGATTATACTGTCATTTCATTAGCTCACATGATGAGGAAGAAAATCACCATGCCAGCTCACTTGATGTATGATGGCCGTGATGACCACCTTTTCCAACACTTTTCCAGTGCTGCGCAGCAGTTAGGTGTCTATACCGCCAATGACTATGCCGATATATTGGAGTCGTTGCTTGCCACGTGGAAGGTAGAAACCCTCGTCGGACTTTCACCTGAAGGCCGAAAGGCTCAAGAGTTTGTTTGTGGGTTGCCACCGAGAATAAGAAAGCTAGAGGAAAGAGCTCAAGCAAGGACCAAGCAACCACCCATGTCTGTACCTTTCAGTTGGATTTTTGGTAGACAAGTGAGGCTTTTGTGA

Protein Analysis

393

Amino Acids

44.65

Weight (kDa)

6.1

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014984)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43710 AT2G43710
fragaria_vesca FvH4_4g10110 FvH4_4g10110
malus_domestica MD04G1048200.v1.1
prunus_persica Prupe.1G203700_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0405901
rosa_laevigata RLG00000008819
rosa_multiflora Rmu_sc0001200.1_g000011
rosa_roxburghii Rroxscaffold_5G00350440
rosa_rugosa Rorug04G0062600
rosa_samantha Rh4AG134100 Rh4BG129200 Rh4CG142000 Rh4DG128500
rosa_wichuraiana Rw4G010920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 939
AccB7I CCANNNNNTGG 1 cut(s) 495
AccI GTMKAC 2 cut(s) 561, 1159
AciI CCGC 4 cut(s) 287, 678, 747, 960
AclWI GGATC 5 cut(s) 275, 608, 621, 815, 828
AcoI YGGCCR 1 cut(s) 898
AcuI CTGAAG 3 cut(s) 95, 525, 1056
AcvI CACGTG 1 cut(s) 1002
AcyI GRCGYC 1 cut(s) 399
AfaI GTAC 1 cut(s) 1137
AfiI CCNNNNNNNGG 4 cut(s) 495, 641, 642, 670
AflIII ACRYGT 1 cut(s) 564
AgsI TTSAA 5 cut(s) 66, 238, 248, 462, 730
AjnI CCWGG 3 cut(s) 488, 494, 663
AluBI AGCT 6 cut(s) 15, 808, 848, 881, 1090, 1103
AluI AGCT 6 cut(s) 15, 808, 848, 881, 1090, 1103
Alw21I GWGCWC 1 cut(s) 1105
AlwI GGATC 5 cut(s) 275, 608, 621, 815, 828
AlwNI CAGNNNCTG 1 cut(s) 495
Ama87I CYCGRG 2 cut(s) 294, 617
AoxI GGCC 4 cut(s) 42, 492, 898, 1039
ApeKI GCWGC 4 cut(s) 15, 782, 935, 940
AseI ATTAAT 1 cut(s) 93
AspLEI GCGC 2 cut(s) 774, 940
AspS9I GGNCC 3 cut(s) 486, 492, 1113
AsuC2I CCSGG 2 cut(s) 618, 619
AsuHPI GGTGA 5 cut(s) 162, 533, 541, 862, 1023
AvaI CYCGRG 2 cut(s) 294, 617
AvaII GGWCC 2 cut(s) 486, 1113
BamHI GGATCC 2 cut(s) 613, 820
BanII GRGCYC 1 cut(s) 1105
BbrPI CACGTG 1 cut(s) 1002
BbsI GAAGAC 1 cut(s) 587
Bbv12I GWGCWC 1 cut(s) 1105
BbvCI CCTCAGC 1 cut(s) 213
BbvI GCAGC 4 cut(s) 2, 769, 922, 952
BccI CCATC 2 cut(s) 431, 890
BceAI ACGGC 3 cut(s) 57, 146, 885
BciT130I CCWGG 3 cut(s) 490, 496, 665
BclI TGATCA 2 cut(s) 6, 387
BcnI CCSGG 2 cut(s) 618, 619
BfaI CTAG 2 cut(s) 200, 1091
BfoI RGCGCY 1 cut(s) 775
BglII AGATCT 1 cut(s) 70
BisI GCNGC 6 cut(s) 16, 288, 748, 783, 936, 941
BlsI GCNGC 6 cut(s) 17, 289, 749, 784, 937, 942
Bme1390I CCNGG 5 cut(s) 490, 496, 618, 619, 665
Bme18I GGWCC 2 cut(s) 486, 1113
BmeT110I CYCGRG 2 cut(s) 294, 617
BmgT120I GGNCC 3 cut(s) 486, 492, 1113
BmiI GGNNCC 3 cut(s) 351, 615, 822
BmrFI CCNGG 5 cut(s) 490, 496, 618, 619, 665
BmrI ACTGGG 1 cut(s) 217
BmsI GCATC 1 cut(s) 195
BmuI ACTGGG 1 cut(s) 217
BpiI GAAGAC 1 cut(s) 587
Bpu10I CCTNAGC 1 cut(s) 213
BpuEI CTTGAG 4 cut(s) 249, 332, 1035, 1089
BpuMI CCSGG 2 cut(s) 618, 619
BsaAI YACGTR 1 cut(s) 1002
BsaHI GRCGYC 1 cut(s) 399
BsaJI CCNNGG 4 cut(s) 128, 489, 617, 618
BsaWI WCCGGW 1 cut(s) 551
Bsc4I CCNNNNNNNGG 4 cut(s) 495, 641, 642, 670
Bse1I ACTGG 2 cut(s) 212, 930
BseBI CCWGG 3 cut(s) 490, 496, 665
BseDI CCNNGG 4 cut(s) 128, 489, 617, 618
BseGI GGATG 2 cut(s) 47, 442
BseLI CCNNNNNNNGG 4 cut(s) 495, 641, 642, 670
BseMII CTCAG 4 cut(s) 204, 320, 384, 774
BseNI ACTGG 2 cut(s) 212, 930
BseXI GCAGC 4 cut(s) 2, 769, 922, 952
BsgI GTGCAG 1 cut(s) 42
BshFI GGCC 4 cut(s) 44, 494, 900, 1041
BsiHKAI GWGCWC 1 cut(s) 1105
BsiHKCI CYCGRG 2 cut(s) 294, 617
BsiSI CCGG 2 cut(s) 552, 618
BslFI GGGAC 2 cut(s) 553, 737
BslI CCNNNNNNNGG 4 cut(s) 495, 641, 642, 670
BsmFI GGGAC 2 cut(s) 553, 737
BsnI GGCC 4 cut(s) 44, 494, 900, 1041
BsoBI CYCGRG 2 cut(s) 294, 617
Bsp1286I GDGCHC 1 cut(s) 1105
Bsp143I GATC 6 cut(s) 6, 70, 280, 387, 613, 820
BspACI CCGC 4 cut(s) 287, 678, 747, 960
BspANI GGCC 4 cut(s) 44, 494, 900, 1041
BspCNI CTCAG 4 cut(s) 205, 321, 385, 773
BspLI GGNNCC 3 cut(s) 351, 615, 822
BspPI GGATC 5 cut(s) 275, 608, 621, 815, 828
BsrI ACTGG 2 cut(s) 212, 930
BssECI CCNNGG 4 cut(s) 128, 489, 617, 618
BssMI GATC 6 cut(s) 6, 70, 280, 387, 613, 820
BssNI GRCGYC 1 cut(s) 399
Bst2UI CCWGG 3 cut(s) 490, 496, 665
Bst4CI ACNGT 3 cut(s) 107, 305, 835
Bst6I CTCTTC 1 cut(s) 501
BstACI GRCGYC 1 cut(s) 399
BstBAI YACGTR 1 cut(s) 1002
BstC8I GCNNGC 3 cut(s) 257, 879, 996
BstDEI CTNAG 4 cut(s) 213, 329, 393, 760
BstDSI CCRYGG 1 cut(s) 128
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 2 cut(s) 47, 442
BstH2I RGCGCY 1 cut(s) 775
BstHHI GCGC 2 cut(s) 774, 940
BstKTI GATC 6 cut(s) 9, 73, 283, 390, 616, 823
BstMBI GATC 6 cut(s) 6, 70, 280, 387, 613, 820
BstMWI GCNNNNNNNGC 3 cut(s) 139, 500, 707
BstNI CCWGG 3 cut(s) 490, 496, 665
BstNSI RCATGY 1 cut(s) 568
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 5 cut(s) 488, 494, 616, 617, 663
BstV1I GCAGC 4 cut(s) 2, 769, 922, 952
BstV2I GAAGAC 1 cut(s) 587
BstX2I RGATCY 3 cut(s) 70, 613, 820
BstYI RGATCY 3 cut(s) 70, 613, 820
BsuRI GGCC 4 cut(s) 44, 494, 900, 1041
BtgI CCRYGG 1 cut(s) 128
BtsCI GGATG 2 cut(s) 47, 442
BtsI GCAGTG 1 cut(s) 696
BtsIMutI CAGTG 3 cut(s) 390, 696, 937
Cac8I GCNNGC 3 cut(s) 257, 879, 996
CaiI CAGNNNCTG 1 cut(s) 495
CfoI GCGC 2 cut(s) 774, 940
Cfr13I GGNCC 3 cut(s) 486, 492, 1113
Cfr9I CCCGGG 1 cut(s) 617
CseI GACGC 1 cut(s) 407
Csp6I GTAC 1 cut(s) 1136
CviAII CATG 9 cut(s) 166, 518, 565, 689, 719, 776, 853, 874, 1129
CviQI GTAC 1 cut(s) 1136
DdeI CTNAG 4 cut(s) 213, 329, 393, 760
DpnI GATC 6 cut(s) 8, 72, 282, 389, 615, 822
DpnII GATC 6 cut(s) 6, 70, 280, 387, 613, 820
DraI TTTAAA 1 cut(s) 193
EaeI YGGCCR 1 cut(s) 898
Eam1104I CTCTTC 1 cut(s) 501
EarI CTCTTC 1 cut(s) 501
Ecl136II GAGCTC 1 cut(s) 1103
Eco24I GRGCYC 1 cut(s) 1105
Eco47I GGWCC 2 cut(s) 486, 1113
Eco53kI GAGCTC 1 cut(s) 1103
Eco57I CTGAAG 3 cut(s) 95, 525, 1056
Eco72I CACGTG 1 cut(s) 1002
Eco88I CYCGRG 2 cut(s) 294, 617
Eco91I GGTNACC 1 cut(s) 521
EcoICRI GAGCTC 1 cut(s) 1103
EcoO109I RGGNCCY 1 cut(s) 492
EcoO65I GGTNACC 1 cut(s) 521
EcoRII CCWGG 3 cut(s) 488, 494, 663
EcoT38I GRGCYC 1 cut(s) 1105
FaeI CATG 9 cut(s) 169, 521, 568, 692, 722, 779, 856, 877, 1132
FalI AAGNNNNNCTT 3 cut(s) 454, 486, 1155
FaqI GGGAC 2 cut(s) 553, 737
FatI CATG 9 cut(s) 165, 517, 564, 688, 718, 775, 852, 873, 1128
FbaI TGATCA 2 cut(s) 6, 387
FblI GTMKAC 2 cut(s) 561, 1159
Fnu4HI GCNGC 6 cut(s) 16, 288, 748, 783, 936, 941
FokI GGATG 2 cut(s) 34, 449
FriOI GRGCYC 1 cut(s) 1105
Fsp4HI GCNGC 6 cut(s) 16, 288, 748, 783, 936, 941
FspBI CTAG 2 cut(s) 200, 1091
FspI TGCGCA 1 cut(s) 939
GlaI GCGC 2 cut(s) 773, 939
GluI GCNGC 6 cut(s) 16, 288, 748, 783, 936, 941
HaeII RGCGCY 1 cut(s) 775
HaeIII GGCC 4 cut(s) 44, 494, 900, 1041
HapII CCGG 2 cut(s) 552, 618
HgaI GACGC 1 cut(s) 407
HhaI GCGC 2 cut(s) 774, 940
Hin1I GRCGYC 1 cut(s) 399
Hin1II CATG 9 cut(s) 169, 521, 568, 692, 722, 779, 856, 877, 1132
Hin6I GCGC 2 cut(s) 772, 938
HinP1I GCGC 2 cut(s) 772, 938
HincII GTYRAC 1 cut(s) 562
HindII GTYRAC 1 cut(s) 562
HinfI GANTC 3 cut(s) 229, 558, 986
HpaII CCGG 2 cut(s) 552, 618
HphI GGTGA 5 cut(s) 162, 533, 541, 862, 1023
Hpy166II GTNNAC 2 cut(s) 562, 1160
Hpy188I TCNGA 3 cut(s) 75, 763, 1025
Hpy188III TCNNGA 9 cut(s) 149, 226, 266, 294, 311, 353, 484, 824, 1052
Hpy8I GTNNAC 2 cut(s) 562, 1160
Hpy99I CGWCG 1 cut(s) 1025
HpyAV CCTTC 7 cut(s) 70, 72, 109, 413, 536, 1000, 1031
HpyCH4III ACNGT 3 cut(s) 107, 305, 835
HpyCH4IV ACGT 1 cut(s) 1001
HpyCH4V TGCA 2 cut(s) 59, 446
HpyF10VI GCNNNNNNNGC 3 cut(s) 139, 500, 707
HpyF3I CTNAG 4 cut(s) 213, 329, 393, 760
HpySE526I ACGT 1 cut(s) 1001
Hsp92I GRCGYC 1 cut(s) 399
Hsp92II CATG 9 cut(s) 169, 521, 568, 692, 722, 779, 856, 877, 1132
HspAI GCGC 2 cut(s) 772, 938
Ksp22I TGATCA 2 cut(s) 6, 387
Kzo9I GATC 6 cut(s) 6, 70, 280, 387, 613, 820
Lsp1109I GCAGC 4 cut(s) 2, 769, 922, 952
LweI GCATC 1 cut(s) 195
MaeI CTAG 2 cut(s) 200, 1091
MaeII ACGT 1 cut(s) 1001
MaeIII GTNAC 4 cut(s) 107, 168, 521, 799
MalI GATC 6 cut(s) 8, 72, 282, 389, 615, 822
MboI GATC 6 cut(s) 6, 70, 280, 387, 613, 820
MboII GAAGA 5 cut(s) 28, 100, 518, 592, 874
MflI RGATCY 3 cut(s) 70, 613, 820
MhlI GDGCHC 1 cut(s) 1105
MluCI AATT 2 cut(s) 180, 573
MlyI GAGTC 3 cut(s) 223, 567, 995
MmeI TCCRAC 5 cut(s) 75, 798, 943, 1003, 1127
MseI TTAA 3 cut(s) 93, 192, 531
MslI CAYNNNNRTG 1 cut(s) 742
MspA1I CMGCKG 2 cut(s) 15, 287
MspI CCGG 2 cut(s) 552, 618
MspR9I CCNGG 5 cut(s) 490, 496, 618, 619, 665
MvaI CCWGG 3 cut(s) 490, 496, 665
MwoI GCNNNNNNNGC 3 cut(s) 139, 500, 707
NciI CCSGG 2 cut(s) 618, 619
NdeII GATC 6 cut(s) 6, 70, 280, 387, 613, 820
NlaIII CATG 9 cut(s) 169, 521, 568, 692, 722, 779, 856, 877, 1132
NlaIV GGNNCC 3 cut(s) 351, 615, 822
NmuCI GTSAC 3 cut(s) 168, 521, 799
NsbI TGCGCA 1 cut(s) 939
NspI RCATGY 1 cut(s) 568
PciI ACATGT 1 cut(s) 564
PflMI CCANNNNNTGG 1 cut(s) 495
PfoI TCCNGGA 1 cut(s) 663
PkrI GCNGC 6 cut(s) 17, 289, 749, 784, 937, 942
PleI GAGTC 3 cut(s) 223, 566, 994
PmaCI CACGTG 1 cut(s) 1002
PmlI CACGTG 1 cut(s) 1002
PpsI GAGTC 3 cut(s) 223, 566, 994
Ppu21I YACGTR 1 cut(s) 1002
PscI ACATGT 1 cut(s) 564
PshBI ATTAAT 1 cut(s) 93
Psp124BI GAGCTC 1 cut(s) 1105
Psp6I CCWGG 3 cut(s) 488, 494, 663
PspCI CACGTG 1 cut(s) 1002
PspEI GGTNACC 1 cut(s) 521
PspGI CCWGG 3 cut(s) 488, 494, 663
PspN4I GGNNCC 3 cut(s) 351, 615, 822
PspPI GGNCC 3 cut(s) 486, 492, 1113
PsrI GAACNNNNNNTAC 2 cut(s) 620, 652
PstNI CAGNNNCTG 1 cut(s) 495
PsuI RGATCY 3 cut(s) 70, 613, 820
PvuII CAGCTG 1 cut(s) 15
RsaI GTAC 1 cut(s) 1137
RsaNI GTAC 1 cut(s) 1136
RseI CAYNNNNRTG 1 cut(s) 742
SacI GAGCTC 1 cut(s) 1105
SalI GTCGAC 1 cut(s) 560
SaqAI TTAA 3 cut(s) 93, 192, 531
SatI GCNGC 6 cut(s) 16, 288, 748, 783, 936, 941
Sau3AI GATC 6 cut(s) 6, 70, 280, 387, 613, 820
Sau96I GGNCC 3 cut(s) 486, 492, 1113
SchI GAGTC 3 cut(s) 223, 567, 995
ScrFI CCNGG 5 cut(s) 490, 496, 618, 619, 665
SduI GDGCHC 1 cut(s) 1105
SfaNI GCATC 1 cut(s) 195
SinI GGWCC 2 cut(s) 486, 1113
SmaI CCCGGG 1 cut(s) 619
SmiMI CAYNNNNRTG 1 cut(s) 742
SmlI CTYRAG 4 cut(s) 264, 311, 1050, 1104
SmoI CTYRAG 4 cut(s) 264, 311, 1050, 1104
Sse9I AATT 2 cut(s) 180, 573
SsiI CCGC 4 cut(s) 287, 678, 747, 960
SspMI CTAG 2 cut(s) 200, 1091
SstI GAGCTC 1 cut(s) 1105
StyD4I CCNGG 5 cut(s) 488, 494, 616, 617, 663
TaaI ACNGT 3 cut(s) 107, 305, 835
TaiI ACGT 1 cut(s) 1004
TaqI TCGA 1 cut(s) 561
TasI AATT 2 cut(s) 180, 573
TauI GCSGC 2 cut(s) 290, 750
Tru1I TTAA 3 cut(s) 93, 192, 531
Tru9I TTAA 3 cut(s) 93, 192, 531
TscAI CASTG 3 cut(s) 397, 703, 937
TseFI GTSAC 3 cut(s) 168, 521, 799
TseI GCWGC 4 cut(s) 15, 782, 935, 940
Tsp45I GTSAC 3 cut(s) 168, 521, 799
TspDTI ATGAA 4 cut(s) 465, 637, 648, 831
TspMI CCCGGG 1 cut(s) 617
TspRI CASTG 3 cut(s) 397, 703, 937
Van91I CCANNNNNTGG 1 cut(s) 495
VpaK11BI GGWCC 2 cut(s) 486, 1113
VspI ATTAAT 1 cut(s) 93
XceI RCATGY 1 cut(s) 568
XmaI CCCGGG 1 cut(s) 617
XmiI GTMKAC 2 cut(s) 561, 1159
XspI CTAG 2 cut(s) 200, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.