No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24577 AT1G67910 AT1G67910 |
| fragaria_vesca | FvH4_4g25640 FvH4_4g25640 |
| malus_domestica | MD13G1100900.v1.1 MD16G1101300.v1.1 |
| prunus_persica | Prupe.1G245600_v2.0.a1 |
| pyrus_communis | pycom16g08580 |
| rosa_chinensis | RchiOBHm_Chr4g0433081 |
| rosa_laevigata | RLG00000006788 |
| rosa_roxburghii | Rroxscaffold_5G00374560 |
| rosa_rugosa | Rorug04G0265100 Rorug04G0265200.1 |
| rosa_samantha | Rh4BG327300 Rh4CG342700 Rh4DG322400 |
| rosa_wichuraiana | Rw4G027740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 187 |
| AfaI | GTAC | 1 cut(s) | 71 |
| AflIII | ACRYGT | 1 cut(s) | 72 |
| AluBI | AGCT | 1 cut(s) | 97 |
| AluI | AGCT | 1 cut(s) | 97 |
| Alw26I | GTCTC | 1 cut(s) | 53 |
| Ama87I | CYCGRG | 1 cut(s) | 175 |
| AoxI | GGCC | 1 cut(s) | 211 |
| ApeKI | GCWGC | 1 cut(s) | 163 |
| AspS9I | GGNCC | 1 cut(s) | 212 |
| AvaI | CYCGRG | 1 cut(s) | 175 |
| BaeGI | GKGCMC | 1 cut(s) | 175 |
| BanII | GRGCYC | 1 cut(s) | 87 |
| BbvI | GCAGC | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 53 |
| BisI | GCNGC | 1 cut(s) | 164 |
| BlpI | GCTNAGC | 1 cut(s) | 98 |
| BlsI | GCNGC | 1 cut(s) | 165 |
| BmeT110I | CYCGRG | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 1 cut(s) | 212 |
| BpmI | CTGGAG | 1 cut(s) | 167 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 98 |
| BpuEI | CTTGAG | 1 cut(s) | 73 |
| BsaAI | YACGTR | 1 cut(s) | 73 |
| BseMII | CTCAG | 2 cut(s) | 54, 89 |
| BseSI | GKGCMC | 1 cut(s) | 175 |
| BseXI | GCAGC | 1 cut(s) | 150 |
| BseYI | CCCAGC | 1 cut(s) | 214 |
| BsgI | GTGCAG | 3 cut(s) | 99, 149, 178 |
| BshFI | GGCC | 1 cut(s) | 213 |
| BsiHKCI | CYCGRG | 1 cut(s) | 175 |
| BsmAI | GTCTC | 1 cut(s) | 53 |
| BsnI | GGCC | 1 cut(s) | 213 |
| BsoBI | CYCGRG | 1 cut(s) | 175 |
| Bsp1286I | GDGCHC | 2 cut(s) | 87, 175 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 98 |
| BspACI | CCGC | 1 cut(s) | 187 |
| BspANI | GGCC | 1 cut(s) | 213 |
| BspCNI | CTCAG | 2 cut(s) | 55, 90 |
| Bst4CI | ACNGT | 2 cut(s) | 170, 206 |
| BstBAI | YACGTR | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 4 cut(s) | 141, 145, 161, 229 |
| BstDEI | CTNAG | 3 cut(s) | 63, 98, 222 |
| BstMAI | GTCTC | 1 cut(s) | 53 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 224 |
| BstNSI | RCATGY | 1 cut(s) | 143 |
| BstSLI | GKGCMC | 1 cut(s) | 175 |
| BstV1I | GCAGC | 1 cut(s) | 150 |
| BsuRI | GGCC | 1 cut(s) | 213 |
| Cac8I | GCNNGC | 4 cut(s) | 141, 145, 161, 229 |
| Cfr13I | GGNCC | 1 cut(s) | 212 |
| CseI | GACGC | 1 cut(s) | 207 |
| Csp6I | GTAC | 1 cut(s) | 70 |
| CviAII | CATG | 3 cut(s) | 103, 140, 199 |
| CviJI | RGCY | 7 cut(s) | 85, 97, 147, 163, 180, 213, 231 |
| CviKI_1 | RGCY | 7 cut(s) | 85, 97, 147, 163, 180, 213, 231 |
| CviQI | GTAC | 1 cut(s) | 70 |
| DdeI | CTNAG | 3 cut(s) | 63, 98, 222 |
| Eco24I | GRGCYC | 1 cut(s) | 87 |
| Eco88I | CYCGRG | 1 cut(s) | 175 |
| EcoT38I | GRGCYC | 1 cut(s) | 87 |
| FaeI | CATG | 3 cut(s) | 106, 143, 202 |
| FaiI | YATR | 4 cut(s) | 35, 104, 141, 200 |
| FatI | CATG | 3 cut(s) | 102, 139, 198 |
| Fnu4HI | GCNGC | 1 cut(s) | 164 |
| FriOI | GRGCYC | 1 cut(s) | 87 |
| Fsp4HI | GCNGC | 1 cut(s) | 164 |
| GluI | GCNGC | 1 cut(s) | 164 |
| GsaI | CCCAGC | 1 cut(s) | 218 |
| GsuI | CTGGAG | 1 cut(s) | 167 |
| HaeIII | GGCC | 1 cut(s) | 213 |
| HgaI | GACGC | 1 cut(s) | 207 |
| Hin1II | CATG | 3 cut(s) | 106, 143, 202 |
| HinfI | GANTC | 1 cut(s) | 46 |
| Hpy188III | TCNNGA | 1 cut(s) | 90 |
| HpyAV | CCTTC | 1 cut(s) | 22 |
| HpyCH4III | ACNGT | 2 cut(s) | 170, 206 |
| HpyCH4IV | ACGT | 1 cut(s) | 72 |
| HpyCH4V | TGCA | 4 cut(s) | 80, 143, 159, 166 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 224 |
| HpyF3I | CTNAG | 3 cut(s) | 63, 98, 222 |
| HpySE526I | ACGT | 1 cut(s) | 72 |
| Hsp92II | CATG | 3 cut(s) | 106, 143, 202 |
| LmnI | GCTCC | 1 cut(s) | 131 |
| LpnPI | CCDG | 8 cut(s) | 63, 66, 129, 139, 145, 197, 213, 228 |
| Lsp1109I | GCAGC | 1 cut(s) | 150 |
| MaeII | ACGT | 1 cut(s) | 72 |
| MboII | GAAGA | 1 cut(s) | 121 |
| MfeI | CAATTG | 1 cut(s) | 115 |
| MhlI | GDGCHC | 2 cut(s) | 87, 175 |
| MluCI | AATT | 1 cut(s) | 115 |
| MnlI | CCTC | 2 cut(s) | 131, 191 |
| MslI | CAYNNNNRTG | 2 cut(s) | 38, 154 |
| MspA1I | CMGCKG | 2 cut(s) | 97, 187 |
| MunI | CAATTG | 1 cut(s) | 115 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 224 |
| NlaIII | CATG | 3 cut(s) | 106, 143, 202 |
| NspI | RCATGY | 1 cut(s) | 143 |
| PaeI | GCATGC | 1 cut(s) | 143 |
| PfeI | GAWTC | 1 cut(s) | 46 |
| PkrI | GCNGC | 1 cut(s) | 165 |
| Ppu21I | YACGTR | 1 cut(s) | 73 |
| PspFI | CCCAGC | 1 cut(s) | 214 |
| PspPI | GGNCC | 1 cut(s) | 212 |
| PvuII | CAGCTG | 1 cut(s) | 97 |
| RsaI | GTAC | 1 cut(s) | 71 |
| RsaNI | GTAC | 1 cut(s) | 70 |
| RseI | CAYNNNNRTG | 2 cut(s) | 38, 154 |
| SatI | GCNGC | 1 cut(s) | 164 |
| Sau96I | GGNCC | 1 cut(s) | 212 |
| SduI | GDGCHC | 2 cut(s) | 87, 175 |
| SetI | ASST | 4 cut(s) | 42, 75, 99, 158 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 38, 154 |
| SmlI | CTYRAG | 1 cut(s) | 88 |
| SmoI | CTYRAG | 1 cut(s) | 88 |
| SphI | GCATGC | 1 cut(s) | 143 |
| Sse9I | AATT | 1 cut(s) | 115 |
| SsiI | CCGC | 1 cut(s) | 187 |
| TaaI | ACNGT | 2 cut(s) | 170, 206 |
| TaiI | ACGT | 1 cut(s) | 75 |
| TasI | AATT | 1 cut(s) | 115 |
| TfiI | GAWTC | 1 cut(s) | 46 |
| TseI | GCWGC | 1 cut(s) | 163 |
| TspDTI | ATGAA | 1 cut(s) | 27 |
| XceI | RCATGY | 1 cut(s) | 143 |