Prupe.1G248800_v2.0.a1

SOUL heme-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
26122218 .. 26123368
1151 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G248800.1

Sequence Viewer

Length: 636 bp
ATGGAGAGGCCATTGTCAATCTTGATAGTAATGTGTTGTTACCTTTACAGTTGTAAACTTGTACTGTCTGGTCAGGCTATTGAATCACCTCAGTACAAGGTGGTGCACTCAGAATCAGATTTTGAGCTGAGACAGTACAGGGAATCCTCATGGATGTCCGCTCTTGTCAGAGAAACAACCTCCTTTGAAAAAGCCACCAAAGATGGCTTTCACAGGTTGTATCAGTACATTCATGGAGCTAACCTTAACACTTCGGAAATTACCATGACTGCCCCTGTCTTAACAAGCATTGTCCCATCAGTGCATGGGCCAGCAGAATATTATGTAAGGCTGTATCTGCCTGCCAAATATGAAAGAACACCTCCACAGCCCTCCAGTGATCTGAATCTGCAGTTTGATAAGTGGAGAAGTCATTGCATAGCAGTCAGAAAGTTTACAGGGTTTGCCAAGGATGACCATTTTCATAAAGAATTTGAAACTCTTGTGAACAGCCTAAATAAGCACTTGAATGGAAAGCCTGCAATTTTGGAAGACAAGAGCTCCTATGCGATTGCCCAGTACAATGCTTCATATCACCTTTCTGGGCGCTTAAATGAAGTGTGGATGGATCTCTCTGGATTTACTTCCGACTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

212

Amino Acids

24.23

Weight (kDa)

6.75

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017289)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25810
malus_domestica MD13G1096900.v1.1
prunus_persica Prupe.1G248800_v2.0.a1
pyrus_communis pycom13g08460
rosa_chinensis RchiOBHm_Chr4g0433261
rosa_laevigata RLG00000006770
rosa_multiflora Rmu_sc0022950.1_g000001
rosa_roxburghii Rroxscaffold_5G00374820
rosa_rugosa Rorug04G0267500
rosa_samantha Rh4AG322000 Rh4BG329400 Rh4CG344700 Rh4DG326100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 161
AciI CCGC 1 cut(s) 159
AclWI GGATC 1 cut(s) 615
AcsI RAATTY 1 cut(s) 470
AfaI GTAC 5 cut(s) 63, 95, 137, 227, 560
AgsI TTSAA 4 cut(s) 83, 188, 476, 508
AluBI AGCT 3 cut(s) 127, 239, 540
AluI AGCT 3 cut(s) 127, 239, 540
Alw21I GWGCWC 2 cut(s) 108, 542
Alw26I GTCTC 1 cut(s) 124
Alw44I GTGCAC 1 cut(s) 104
AlwI GGATC 1 cut(s) 615
AoxI GGCC 2 cut(s) 8, 308
ApaLI GTGCAC 1 cut(s) 104
ApoI RAATTY 1 cut(s) 470
AspLEI GCGC 1 cut(s) 588
AspS9I GGNCC 1 cut(s) 308
AsuHPI GGTGA 2 cut(s) 78, 566
BaeGI GKGCMC 1 cut(s) 108
BanII GRGCYC 1 cut(s) 542
BbsI GAAGAC 1 cut(s) 537
Bbv12I GWGCWC 2 cut(s) 108, 542
BccI CCATC 3 cut(s) 197, 304, 598
BcoDI GTCTC 1 cut(s) 124
BfmI CTRYAG 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 589
BmgT120I GGNCC 1 cut(s) 308
BmrI ACTGGG 1 cut(s) 550
BmuI ACTGGG 1 cut(s) 550
BpiI GAAGAC 1 cut(s) 537
BpmI CTGGAG 1 cut(s) 358
BsaBI GATNNNNATC 1 cut(s) 384
BsaJI CCNNGG 1 cut(s) 447
BsaXI ACNNNNNCTCC 2 cut(s) 524, 554
Bse1I ACTGG 2 cut(s) 375, 556
Bse3DI GCAATG 1 cut(s) 412
Bse8I GATNNNNATC 1 cut(s) 384
BseDI CCNNGG 1 cut(s) 447
BseGI GGATG 3 cut(s) 159, 457, 609
BseJI GATNNNNATC 1 cut(s) 384
BseMI GCAATG 1 cut(s) 412
BseMII CTCAG 3 cut(s) 104, 119, 123
BseNI ACTGG 2 cut(s) 375, 556
BseSI GKGCMC 1 cut(s) 108
BshFI GGCC 2 cut(s) 10, 310
BsiHKAI GWGCWC 2 cut(s) 108, 542
BslFI GGGAC 1 cut(s) 278
BsmAI GTCTC 1 cut(s) 124
BsmFI GGGAC 1 cut(s) 278
BsnI GGCC 2 cut(s) 10, 310
Bsp1286I GDGCHC 2 cut(s) 108, 542
Bsp143I GATC 2 cut(s) 379, 607
BspACI CCGC 1 cut(s) 159
BspANI GGCC 2 cut(s) 10, 310
BspCNI CTCAG 3 cut(s) 103, 120, 122
BspMAI CTGCAG 1 cut(s) 393
BspPI GGATC 1 cut(s) 615
BsrBI CCGCTC 1 cut(s) 161
BsrDI GCAATG 1 cut(s) 412
BsrI ACTGG 2 cut(s) 375, 556
BssECI CCNNGG 1 cut(s) 447
BssMI GATC 2 cut(s) 379, 607
BssT1I CCWWGG 1 cut(s) 447
Bst4CI ACNGT 3 cut(s) 50, 66, 135
BstC8I GCNNGC 3 cut(s) 312, 342, 519
BstDEI CTNAG 3 cut(s) 90, 109, 128
BstF5I GGATG 3 cut(s) 159, 457, 609
BstH2I RGCGCY 1 cut(s) 589
BstHHI GCGC 1 cut(s) 588
BstKTI GATC 2 cut(s) 382, 610
BstMAI GTCTC 1 cut(s) 124
BstMBI GATC 2 cut(s) 379, 607
BstMWI GCNNNNNNNGC 1 cut(s) 337
BstSFI CTRYAG 1 cut(s) 389
BstSLI GKGCMC 1 cut(s) 108
BstV2I GAAGAC 1 cut(s) 537
BstX2I RGATCY 1 cut(s) 607
BstYI RGATCY 1 cut(s) 607
BsuRI GGCC 2 cut(s) 10, 310
BtsCI GGATG 3 cut(s) 159, 457, 609
BtsIMutI CAGTG 2 cut(s) 306, 382
Cac8I GCNNGC 3 cut(s) 312, 342, 519
CfoI GCGC 1 cut(s) 588
Cfr13I GGNCC 1 cut(s) 308
Csp6I GTAC 5 cut(s) 62, 94, 136, 226, 559
CviAII CATG 4 cut(s) 150, 233, 265, 305
CviQI GTAC 5 cut(s) 62, 94, 136, 226, 559
DdeI CTNAG 3 cut(s) 90, 109, 128
DpnI GATC 2 cut(s) 381, 609
DpnII GATC 2 cut(s) 379, 607
Ecl136II GAGCTC 1 cut(s) 540
Eco130I CCWWGG 1 cut(s) 447
Eco24I GRGCYC 1 cut(s) 542
Eco53kI GAGCTC 1 cut(s) 540
EcoICRI GAGCTC 1 cut(s) 540
EcoT14I CCWWGG 1 cut(s) 447
EcoT38I GRGCYC 1 cut(s) 542
ErhI CCWWGG 1 cut(s) 447
FaeI CATG 4 cut(s) 153, 236, 268, 308
FaqI GGGAC 1 cut(s) 278
FatI CATG 4 cut(s) 149, 232, 264, 304
FokI GGATG 3 cut(s) 166, 464, 616
FriOI GRGCYC 1 cut(s) 542
GlaI GCGC 1 cut(s) 587
GsuI CTGGAG 1 cut(s) 358
HaeII RGCGCY 1 cut(s) 589
HaeIII GGCC 2 cut(s) 10, 310
HhaI GCGC 1 cut(s) 588
Hin1II CATG 4 cut(s) 153, 236, 268, 308
Hin6I GCGC 1 cut(s) 586
HinP1I GCGC 1 cut(s) 586
HinfI GANTC 4 cut(s) 83, 113, 143, 385
HphI GGTGA 2 cut(s) 78, 566
Hpy166II GTNNAC 4 cut(s) 56, 106, 435, 487
Hpy188I TCNGA 7 cut(s) 112, 118, 170, 256, 384, 428, 628
Hpy188III TCNNGA 2 cut(s) 22, 615
Hpy8I GTNNAC 4 cut(s) 56, 106, 435, 487
HpyCH4III ACNGT 3 cut(s) 50, 66, 135
HpyCH4V TGCA 5 cut(s) 106, 304, 391, 417, 521
HpyF10VI GCNNNNNNNGC 1 cut(s) 337
HpyF3I CTNAG 3 cut(s) 90, 109, 128
Hsp92II CATG 4 cut(s) 153, 236, 268, 308
HspAI GCGC 1 cut(s) 586
Kzo9I GATC 2 cut(s) 379, 607
LmnI GCTCC 2 cut(s) 236, 545
MaeIII GTNAC 1 cut(s) 38
MalI GATC 2 cut(s) 381, 609
MbiI CCGCTC 1 cut(s) 161
MboI GATC 2 cut(s) 379, 607
MboII GAAGA 1 cut(s) 542
MflI RGATCY 1 cut(s) 607
MhlI GDGCHC 2 cut(s) 108, 542
MluCI AATT 3 cut(s) 258, 470, 522
MnlI CCTC 5 cut(s) 99, 157, 190, 372, 382
MseI TTAA 3 cut(s) 246, 281, 590
MslI CAYNNNNRTG 1 cut(s) 507
MwoI GCNNNNNNNGC 1 cut(s) 337
NdeII GATC 2 cut(s) 379, 607
NlaIII CATG 4 cut(s) 153, 236, 268, 308
PfeI GAWTC 4 cut(s) 83, 113, 143, 385
Psp124BI GAGCTC 1 cut(s) 542
PspPI GGNCC 1 cut(s) 308
PstI CTGCAG 1 cut(s) 393
PsuI RGATCY 1 cut(s) 607
RsaI GTAC 5 cut(s) 63, 95, 137, 227, 560
RsaNI GTAC 5 cut(s) 62, 94, 136, 226, 559
RseI CAYNNNNRTG 1 cut(s) 507
SacI GAGCTC 1 cut(s) 542
SaqAI TTAA 3 cut(s) 246, 281, 590
Sau3AI GATC 2 cut(s) 379, 607
Sau96I GGNCC 1 cut(s) 308
SduI GDGCHC 2 cut(s) 108, 542
SfcI CTRYAG 1 cut(s) 389
SmiMI CAYNNNNRTG 1 cut(s) 507
Sse9I AATT 3 cut(s) 258, 470, 522
SsiI CCGC 1 cut(s) 159
SspI AATATT 1 cut(s) 320
SstI GAGCTC 1 cut(s) 542
StyI CCWWGG 1 cut(s) 447
TaaI ACNGT 3 cut(s) 50, 66, 135
TasI AATT 3 cut(s) 258, 470, 522
TatI WGTACW 5 cut(s) 61, 93, 135, 225, 558
TfiI GAWTC 4 cut(s) 83, 113, 143, 385
Tru1I TTAA 3 cut(s) 246, 281, 590
Tru9I TTAA 3 cut(s) 246, 281, 590
TscAI CASTG 2 cut(s) 306, 382
TspDTI ATGAA 5 cut(s) 221, 366, 452, 558, 609
TspRI CASTG 2 cut(s) 306, 382
VneI GTGCAC 1 cut(s) 104
XapI RAATTY 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.