Prupe.1G264000_v2.0.a1

Protein of unknown function (DUF1336)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
27263463 .. 27267845
4383 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G264000.3

Sequence Viewer

Length: 1653 bp
ATGGGGTCGTGTGTGTCAACGCCGGACCGGTGCGTTGGAGGGAGATTGGGTTCGTCCAAGAAGAAGAAGAGCCGGAAGAGGAGAAGAGATGGGGTGAAAAGATGGGCTAAACAGTCTCCGGGTCGGGCCGCCCGGTTGCCTGAGGGATCACCGGACAGGTTTGATGGGTCTGCTCCTCCTGATCGCTCCACCTTCAACAACCCCACTTTCCAAGCTTCCACAGAAAGTATCGAAGAGGCGTGGTTTGATCCAGTTGCAATATTTGAATCGGACTGCGATGAAGATTTCCAAAGTGCTCCAGATGAGATGCCATCTTTAAACGGCTTTGACCATGTATCTGTATCTAGTAATTCGTCTGTGAAAGATGCCAATTGTGGAGAGTATAATGACAATGGCCTCCATACCTCTTCTACTGATCGAATGCATAAACCAGGGGATCTTTCAACAGAAAATTCTGCAAGCAACTCTGTCACTGTGGTTTCTCAAAGGAGCAATGTACAGATCATGAATGTTAATGACGTTGATACCCAAACTAAATTTAATGATCATTCAGTAATTGAAGCAAATGAACCTGTGTTCCTTGATGAAATCTCCTCTTCTGTGGATGAAACCTCTGCCAAAGAGGAAGGAATACTGGATAATTGTGGGATTCTTCCAAGCACCTGTCTGCCTTGTCTTGCGTCAACCGTTCCCTCAGTTGAAAAGAGAAGGTCGCTAATTTCTAGTCCACCGAGTGCAAGGAAAAAGGCTGCCTTAAAACTTCCCTTCAAATGGAAAGAGCAAGCTAATGCAACTTTATTTTCCTCAAAGAAGCTTCTGCAAAGACCAATAGCAGGTTCTCAAGTTCCTTTTTGCCCTATAGAAAAGAAAATGTTTGATTCTTGGTCACATATTGAGCCAAATACTTTCAAAGTTCGGGGACCGAATTATTTTAGGGACAAGAAGAAGGAATTTGCTCCCAGCTATGCTGCATATTATCCATTTGGTCTTGACGTATTTTTATCTCAGCGAAAAATAGATCATATAGCTCGCTTTGTGGAACTCCCTATTGTTAATTCATCTGGAGATCTTCCTGCCATTCTTGTTGTAAATGTACAGGTGCCATTGTATCCTGCTGCAATTTTTCAGGGTGAGACTGATGGAGAAGGAATGAATTTTGTTTTGTACTTTAAGCTTTCTGATATATACTCCAAGGAACTTCCATCAAATTTTCAAGAAAATATCAGAAGGTTAATTGGCGATGAAGTTGAAAAGGTCAAAGGTTTTCCTGTGGATACAATTGCACCCTTTAGAGAAAGGTTGAAAATATTGGGACGTGTTGTGAATGTGGAAGATCTTCACTTGAGTGCACCGGAGCGGAAGCTTATGCAGGCTTACAATGAAAAACCAGTTCTTTCACGTCCTCAACATGAGTTTTACTTGGGAGAAAACTACCTGGAGATTGATTTGGATATGCACAGATTTAGTTATATCTCTAGGAAGGGGTTTGAAGCATTCTTGGATAGGCTAAAGCTCTGCATCTTGGATGTTGGCCTCACAATTCAGGGGAACAAGCCCGAAGAGTTGCCCGAGCAGATCTTATGTTGTATACGATTGAATGGAATTGACTACATGAACTACCACCAACTGGGGTTGACCCAAGATCCCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

551

Amino Acids

61.71

Weight (kDa)

5.92

Isoelectric Point (pI)

58.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 824
AccB1I GGYRCC 1 cut(s) 1099
AccB7I CCANNNNNTGG 1 cut(s) 1627
AccBSI CCGCTC 1 cut(s) 1357
AccI GTMKAC 1 cut(s) 1588
AciI CCGC 2 cut(s) 129, 1357
AclWI GGATC 4 cut(s) 154, 242, 444, 1637
AcsI RAATTY 5 cut(s) 451, 536, 950, 1153, 1207
AdeI CACNNNGTG 1 cut(s) 734
AfaI GTAC 3 cut(s) 498, 1095, 1166
AfiI CCNNNNNNNGG 3 cut(s) 771, 833, 1627
AflIII ACRYGT 1 cut(s) 1315
AgeI ACCGGT 1 cut(s) 27
AjiI CACGTC 2 cut(s) 1316, 1400
AjnI CCWGG 2 cut(s) 430, 1434
AjuI GAANNNNNNNTTGG 2 cut(s) 820, 852
AleI CACNNNNGTG 1 cut(s) 1344
AloI GAACNNNNNNTCC 4 cut(s) 34, 66, 561, 593
AluBI AGCT 8 cut(s) 215, 785, 814, 963, 1028, 1174, 1363, 1513
AluI AGCT 8 cut(s) 215, 785, 814, 963, 1028, 1174, 1363, 1513
Alw21I GWGCWC 2 cut(s) 298, 1351
Alw26I GTCTC 2 cut(s) 120, 1127
Alw44I GTGCAC 1 cut(s) 1347
AlwI GGATC 4 cut(s) 154, 242, 444, 1637
Ama87I CYCGRG 1 cut(s) 1568
AoxI GGCC 3 cut(s) 126, 394, 1531
ApaLI GTGCAC 1 cut(s) 1347
ApeKI GCWGC 3 cut(s) 749, 968, 1115
ApoI RAATTY 5 cut(s) 451, 536, 950, 1153, 1207
AsiGI ACCGGT 1 cut(s) 27
Asp700I GAANNNNTTC 1 cut(s) 1335
AspS9I GGNCC 3 cut(s) 25, 126, 920
AsuC2I CCSGG 2 cut(s) 120, 133
AsuHPI GGTGA 3 cut(s) 106, 141, 1142
AvaI CYCGRG 1 cut(s) 1568
AvaII GGWCC 2 cut(s) 25, 920
AxyI CCTNAGG 1 cut(s) 141
BaeGI GKGCMC 1 cut(s) 1351
BanI GGYRCC 1 cut(s) 1099
Bbv12I GWGCWC 2 cut(s) 298, 1351
BbvI GCAGC 3 cut(s) 736, 955, 1102
BccI CCATC 6 cut(s) 83, 96, 158, 319, 1133, 1210
BceAI ACGGC 1 cut(s) 337
BciT130I CCWGG 2 cut(s) 432, 1436
BciVI GTATCC 2 cut(s) 1119, 1267
BclI TGATCA 1 cut(s) 544
BcnI CCSGG 2 cut(s) 120, 133
BcoDI GTCTC 2 cut(s) 120, 1127
BfaI CTAG 3 cut(s) 345, 723, 1476
BfmI CTRYAG 1 cut(s) 858
BfuAI ACCTGC 1 cut(s) 824
BfuI GTATCC 2 cut(s) 1119, 1267
BglII AGATCT 3 cut(s) 1066, 1333, 1575
BisI GCNGC 4 cut(s) 129, 750, 969, 1116
BlsI GCNGC 4 cut(s) 130, 751, 970, 1117
Bme1390I CCNGG 4 cut(s) 120, 133, 432, 1436
Bme18I GGWCC 2 cut(s) 25, 920
BmeT110I CYCGRG 1 cut(s) 1568
BmgBI CACGTC 2 cut(s) 1316, 1400
BmgT120I GGNCC 3 cut(s) 25, 126, 920
BmiI GGNNCC 2 cut(s) 921, 1101
BmrFI CCNGG 4 cut(s) 120, 133, 432, 1436
BmrI ACTGGG 1 cut(s) 1637
BmsI GCATC 3 cut(s) 297, 355, 1527
BmuI ACTGGG 1 cut(s) 1637
BpmI CTGGAG 3 cut(s) 282, 1083, 1457
BpuEI CTTGAG 2 cut(s) 825, 1363
BpuMI CCSGG 2 cut(s) 120, 133
BsaJI CCNNGG 2 cut(s) 431, 1191
BsaWI WCCGGW 3 cut(s) 27, 151, 1351
BsaXI ACNNNNNCTCC 2 cut(s) 34, 64
Bsc4I CCNNNNNNNGG 3 cut(s) 771, 833, 1627
Bse118I RCCGGY 1 cut(s) 27
Bse1I ACTGG 4 cut(s) 251, 639, 1388, 1632
Bse21I CCTNAGG 1 cut(s) 141
Bse3DI GCAATG 1 cut(s) 499
BseBI CCWGG 2 cut(s) 432, 1436
BseDI CCNNGG 2 cut(s) 431, 1191
BseGI GGATG 2 cut(s) 610, 1531
BseLI CCNNNNNNNGG 3 cut(s) 771, 833, 1627
BseMI GCAATG 1 cut(s) 499
BseMII CTCAG 3 cut(s) 132, 708, 1019
BseNI ACTGG 4 cut(s) 251, 639, 1388, 1632
BseRI GAGGAG 3 cut(s) 94, 165, 583
BseSI GKGCMC 1 cut(s) 1351
BseXI GCAGC 3 cut(s) 736, 955, 1102
BseYI CCCAGC 1 cut(s) 959
BshFI GGCC 3 cut(s) 128, 396, 1533
BshNI GGYRCC 1 cut(s) 1099
BshTI ACCGGT 1 cut(s) 27
BsiHKAI GWGCWC 2 cut(s) 298, 1351
BsiHKCI CYCGRG 1 cut(s) 1568
BsiSI CCGG 7 cut(s) 23, 28, 73, 119, 133, 152, 1352
BslFI GGGAC 3 cut(s) 933, 950, 1326
BslI CCNNNNNNNGG 3 cut(s) 771, 833, 1627
BsmAI GTCTC 2 cut(s) 120, 1127
BsmFI GGGAC 3 cut(s) 933, 950, 1326
BsmI GAATGC 2 cut(s) 426, 1493
BsnI GGCC 3 cut(s) 128, 396, 1533
BsoBI CYCGRG 1 cut(s) 1568
Bsp1286I GDGCHC 2 cut(s) 298, 1351
Bsp1407I TGTACA 2 cut(s) 496, 1093
BspACI CCGC 2 cut(s) 129, 1357
BspANI GGCC 3 cut(s) 128, 396, 1533
BspCNI CTCAG 3 cut(s) 133, 707, 1018
BspHI TCATGA 1 cut(s) 504
BspLI GGNNCC 2 cut(s) 921, 1101
BspMI ACCTGC 1 cut(s) 824
BspPI GGATC 4 cut(s) 154, 242, 444, 1637
BspQI GCTCTTC 1 cut(s) 62
BspT107I GGYRCC 1 cut(s) 1099
BsrBI CCGCTC 1 cut(s) 1357
BsrDI GCAATG 1 cut(s) 499
BsrFI RCCGGY 1 cut(s) 27
BsrGI TGTACA 2 cut(s) 496, 1093
BsrI ACTGG 4 cut(s) 251, 639, 1388, 1632
BssAI RCCGGY 1 cut(s) 27
BssECI CCNNGG 2 cut(s) 431, 1191
BssNAI GTATAC 1 cut(s) 1589
BssT1I CCWWGG 1 cut(s) 1191
Bst1107I GTATAC 1 cut(s) 1589
Bst2UI CCWGG 2 cut(s) 432, 1436
Bst4CI ACNGT 3 cut(s) 114, 475, 688
Bst6I CTCTTC 7 cut(s) 62, 71, 79, 228, 412, 601, 1554
BstAUI TGTACA 2 cut(s) 496, 1093
BstC8I GCNNGC 4 cut(s) 460, 783, 1030, 1371
BstDEI CTNAG 3 cut(s) 141, 694, 1005
BstF5I GGATG 2 cut(s) 610, 1531
BstMAI GTCTC 2 cut(s) 120, 1127
BstNI CCWGG 2 cut(s) 432, 1436
BstSCI CCNGG 4 cut(s) 118, 131, 430, 1434
BstSFI CTRYAG 1 cut(s) 858
BstSLI GKGCMC 1 cut(s) 1351
BstV1I GCAGC 3 cut(s) 736, 955, 1102
BstX2I RGATCY 5 cut(s) 436, 1066, 1333, 1575, 1642
BstYI RGATCY 5 cut(s) 436, 1066, 1333, 1575, 1642
BstZ17I GTATAC 1 cut(s) 1589
Bsu36I CCTNAGG 1 cut(s) 141
BsuI GTATCC 2 cut(s) 1119, 1267
BsuRI GGCC 3 cut(s) 128, 396, 1533
BtgZI GCGATG 2 cut(s) 291, 1254
BtrI CACGTC 2 cut(s) 1316, 1400
BtsCI GGATG 2 cut(s) 610, 1531
BtsIMutI CAGTG 1 cut(s) 471
BveI ACCTGC 1 cut(s) 824
Cac8I GCNNGC 4 cut(s) 460, 783, 1030, 1371
CciI TCATGA 1 cut(s) 504
Cfr10I RCCGGY 1 cut(s) 27
Cfr13I GGNCC 3 cut(s) 25, 126, 920
CpoI CGGWCCG 1 cut(s) 25
CseI GACGC 1 cut(s) 669
Csp6I GTAC 3 cut(s) 497, 1094, 1165
CspAI ACCGGT 1 cut(s) 27
CspI CGGWCCG 1 cut(s) 25
CviAII CATG 4 cut(s) 332, 505, 1409, 1612
CviQI GTAC 3 cut(s) 497, 1094, 1165
DdeI CTNAG 3 cut(s) 141, 694, 1005
DraI TTTAAA 1 cut(s) 318
DraIII CACNNNGTG 1 cut(s) 734
Eam1104I CTCTTC 7 cut(s) 62, 71, 79, 228, 412, 601, 1554
EarI CTCTTC 7 cut(s) 62, 71, 79, 228, 412, 601, 1554
Eco130I CCWWGG 1 cut(s) 1191
Eco47I GGWCC 2 cut(s) 25, 920
Eco81I CCTNAGG 1 cut(s) 141
Eco88I CYCGRG 1 cut(s) 1568
EcoRII CCWGG 2 cut(s) 430, 1434
EcoT14I CCWWGG 1 cut(s) 1191
EcoT22I ATGCAT 1 cut(s) 426
ErhI CCWWGG 1 cut(s) 1191
FaeI CATG 4 cut(s) 335, 508, 1412, 1615
FalI AAGNNNNNCTT 3 cut(s) 737, 769, 1632
FaqI GGGAC 3 cut(s) 933, 950, 1326
FatI CATG 4 cut(s) 331, 504, 1408, 1611
FbaI TGATCA 1 cut(s) 544
FblI GTMKAC 1 cut(s) 1588
Fnu4HI GCNGC 4 cut(s) 129, 750, 969, 1116
FokI GGATG 2 cut(s) 617, 1538
Fsp4HI GCNGC 4 cut(s) 129, 750, 969, 1116
FspBI CTAG 3 cut(s) 345, 723, 1476
GluI GCNGC 4 cut(s) 129, 750, 969, 1116
GsaI CCCAGC 1 cut(s) 963
GsuI CTGGAG 3 cut(s) 282, 1083, 1457
HaeIII GGCC 3 cut(s) 128, 396, 1533
HapII CCGG 7 cut(s) 23, 28, 73, 119, 133, 152, 1352
HgaI GACGC 1 cut(s) 669
Hin1II CATG 4 cut(s) 335, 508, 1412, 1615
HincII GTYRAC 3 cut(s) 18, 684, 1635
HindII GTYRAC 3 cut(s) 18, 684, 1635
HindIII AAGCTT 4 cut(s) 213, 812, 1172, 1361
HinfI GANTC 3 cut(s) 266, 649, 878
HpaII CCGG 7 cut(s) 23, 28, 73, 119, 133, 152, 1352
HphI GGTGA 3 cut(s) 106, 141, 1142
Hpy166II GTNNAC 6 cut(s) 18, 684, 728, 1349, 1589, 1635
Hpy188I TCNGA 3 cut(s) 271, 1180, 1226
Hpy188III TCNNGA 6 cut(s) 179, 299, 505, 989, 1062, 1214
Hpy8I GTNNAC 6 cut(s) 18, 684, 728, 1349, 1589, 1635
HpyAV CCTTC 8 cut(s) 202, 620, 702, 775, 940, 1139, 1221, 1474
HpyCH4III ACNGT 3 cut(s) 114, 475, 688
HpyCH4IV ACGT 4 cut(s) 519, 993, 1315, 1399
HpyF3I CTNAG 3 cut(s) 141, 694, 1005
HpySE526I ACGT 4 cut(s) 519, 993, 1315, 1399
Hsp92II CATG 4 cut(s) 335, 508, 1412, 1615
Ksp22I TGATCA 1 cut(s) 544
LguI GCTCTTC 1 cut(s) 62
LmnI GCTCC 6 cut(s) 178, 191, 301, 489, 961, 1354
Lsp1109I GCAGC 3 cut(s) 736, 955, 1102
LweI GCATC 3 cut(s) 297, 355, 1527
MaeI CTAG 3 cut(s) 345, 723, 1476
MaeII ACGT 4 cut(s) 519, 993, 1315, 1399
MaeIII GTNAC 2 cut(s) 469, 885
MbiI CCGCTC 1 cut(s) 1357
MfeI CAATTG 2 cut(s) 370, 1278
MflI RGATCY 5 cut(s) 436, 1066, 1333, 1575, 1642
MhlI GDGCHC 2 cut(s) 298, 1351
MmeI TCCRAC 1 cut(s) 16
Mph1103I ATGCAT 1 cut(s) 426
MroXI GAANNNNTTC 1 cut(s) 1335
MseI TTAA 7 cut(s) 317, 513, 540, 755, 1053, 1170, 1232
MslI CAYNNNNRTG 1 cut(s) 1344
MspI CCGG 7 cut(s) 23, 28, 73, 119, 133, 152, 1352
MspR9I CCNGG 4 cut(s) 120, 133, 432, 1436
MunI CAATTG 2 cut(s) 370, 1278
Mva1269I GAATGC 2 cut(s) 426, 1493
MvaI CCWGG 2 cut(s) 432, 1436
NciI CCSGG 2 cut(s) 120, 133
NlaIII CATG 4 cut(s) 335, 508, 1412, 1615
NlaIV GGNNCC 2 cut(s) 921, 1101
NmuCI GTSAC 2 cut(s) 469, 885
NsiI ATGCAT 1 cut(s) 426
OliI CACNNNNGTG 1 cut(s) 1344
PagI TCATGA 1 cut(s) 504
PciSI GCTCTTC 1 cut(s) 62
PctI GAATGC 2 cut(s) 426, 1493
PdmI GAANNNNTTC 1 cut(s) 1335
PfeI GAWTC 3 cut(s) 266, 649, 878
PflMI CCANNNNNTGG 1 cut(s) 1627
PinAI ACCGGT 1 cut(s) 27
PkrI GCNGC 4 cut(s) 130, 751, 970, 1117
Psp6I CCWGG 2 cut(s) 430, 1434
PspFI CCCAGC 1 cut(s) 959
PspGI CCWGG 2 cut(s) 430, 1434
PspN4I GGNNCC 2 cut(s) 921, 1101
PspPI GGNCC 3 cut(s) 25, 126, 920
PsuI RGATCY 5 cut(s) 436, 1066, 1333, 1575, 1642
RsaI GTAC 3 cut(s) 498, 1095, 1166
RsaNI GTAC 3 cut(s) 497, 1094, 1165
RseI CAYNNNNRTG 1 cut(s) 1344
Rsr2I CGGWCCG 1 cut(s) 25
RsrII CGGWCCG 1 cut(s) 25
SapI GCTCTTC 1 cut(s) 62
SaqAI TTAA 7 cut(s) 317, 513, 540, 755, 1053, 1170, 1232
SatI GCNGC 4 cut(s) 129, 750, 969, 1116
Sau96I GGNCC 3 cut(s) 25, 126, 920
ScrFI CCNGG 4 cut(s) 120, 133, 432, 1436
SduI GDGCHC 2 cut(s) 298, 1351
SfaNI GCATC 3 cut(s) 297, 355, 1527
SfcI CTRYAG 1 cut(s) 858
SinI GGWCC 2 cut(s) 25, 920
SmiMI CAYNNNNRTG 1 cut(s) 1344
SmlI CTYRAG 2 cut(s) 840, 1342
SmoI CTYRAG 2 cut(s) 840, 1342
SsiI CCGC 2 cut(s) 129, 1357
SspI AATATT 2 cut(s) 261, 1308
SspMI CTAG 3 cut(s) 345, 723, 1476
StyD4I CCNGG 4 cut(s) 118, 131, 430, 1434
StyI CCWWGG 1 cut(s) 1191
TaaI ACNGT 3 cut(s) 114, 475, 688
TaiI ACGT 4 cut(s) 522, 996, 1318, 1402
TaqI TCGA 2 cut(s) 231, 418
TaqII GACCGA 1 cut(s) 937
TatI WGTACW 3 cut(s) 496, 1093, 1164
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 3 cut(s) 266, 649, 878
Tru1I TTAA 7 cut(s) 317, 513, 540, 755, 1053, 1170, 1232
Tru9I TTAA 7 cut(s) 317, 513, 540, 755, 1053, 1170, 1232
TscAI CASTG 1 cut(s) 478
TseFI GTSAC 2 cut(s) 469, 885
TseI GCWGC 3 cut(s) 749, 968, 1115
Tsp45I GTSAC 2 cut(s) 469, 885
TspRI CASTG 1 cut(s) 478
Van91I CCANNNNNTGG 1 cut(s) 1627
VneI GTGCAC 1 cut(s) 1347
VpaK11BI GGWCC 2 cut(s) 25, 920
XapI RAATTY 5 cut(s) 451, 536, 950, 1153, 1207
XmiI GTMKAC 1 cut(s) 1588
XmnI GAANNNNTTC 1 cut(s) 1335
XspI CTAG 3 cut(s) 345, 723, 1476
Zsp2I ATGCAT 1 cut(s) 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.