Prupe.1G267500_v2.0.a1

Protein NRT1 PTR FAMILY 4.6-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
27492946 .. 27498224
5279 bp
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UTR
Exon/CDS
Intron
Prupe.1G267500.2

Sequence Viewer

Length: 1767 bp
ATGGAACAAGAACAGCAGCTGAGCACCAGATGGGAAGGCTATGTTAACTGGAGGAACAGAGCTGCAATCAGAGGCCGCCATGGTGGCATGCTTGCCGCCTCCTTTGTCTTGGTGGCGGAGATATTGGAGAACTTGGCATATCTGGCAAATGCAAGCAATTTGGTGCTTTACTTATCAAAGTATATGCATTTATCTCCATCCAAAGCGGCCAACGATGTCACAGACTTCATGGGCACAGCCTTCCTTCTGGCCCTTCTTGGTGGTTTCTTATCCGATGCTTTTTTCACAACTTATCACATCTACTTGATAAGTACAGTTACTGAATTTCTGGGTTTAATCTTACTCACAGTGCAAGCTCGCTTACCTTCACTGAAGCCACCAACATGCAGTCCAGACAGCCTCAATAATCCATGCCAAGAAGTTGAAGGTGGAAAGGCTGCCCTGCTGTTCATAGGCCTCTATCTGGTGGCATTGGGTGTTGGAGGAATAAAGGGCTCCTTACCTTCACATGGAGCTGAGCAATTCGATGAGAGCACCCCACAAGGAAGGAAGCAGAGATCAACCTTCTTCAACTACTACGTATTCTGCCTTGCTTGCGGCGGCCTAATTGCGGTGACGCTGGTGGTGTGGATTGAGGACAACAAAGGATGGGAATGGGGTTTTGGAATTGCAACTATTAGCATATTGTTGTCTATACCAGTCTTTCTTGCTGGCTCCACTCTTTACAGGAACAAAATACCTCGTGGAAGTCCACTGACAACAATTTTCAAGGTTTTGATTGCTGCAACACTTCACAGTTGTATGACCAAAAGTCCAAGCAATGCCATTGCAAGCATGGCCCCAACCCCTTCTTCTCCAACCCCAACCAGTAAAGCAATCCAAGAAGGAAACACCACGGAGAAGGAGGCGTCCACTGCTGATGATCAAGATCAAGCCCCAACACAAAGCCTCAAATTCCTAAACAGAGCAGCGCAGGTGAACAACCCAGCACATAAGGCACTAGAATGCACCTTGCAACAAGTAGAAGAAGTCAAAATTGTGCTGAAAATCCTCCCCATATTCGCTTGCACCATCATGCTCAATTGCTGCTTAGCTCAGCTCTCAACGTTCTCTGTCCAGCAAGCTGCAACCATGGACACAAAGCTTGGTTCTTTGAAAGTCCCACCAGCTTCTCTCCCCATTTTCCCTGTAGTCTTCATCATGATCCTAGCACCAGTCTATGACTTCTTCATCATCCCATTTGCAAGAAAATCGACAAAATCTGAAATGGGGATCACTCACTTGCAACGAATTGGAATCGGTTTAGCTCTGTCCATCATTGCAATGGCAATAGCAGCTCTTGTCGAGATTAAGCGAAAGCGAGTTGCTTCCACCTCGGGGCTACTCGACTCGAAAGAGCCATTGCCCCTCACATTCTTTTGGGTTGCACTTCAGTACTTGTTCCTTGGGTCTGCAGACCTCTTCACATTGGCTGGACTGTTGGAATTTTTCTTCACAGAAGCACCAACAAGCATGAGATCTTTGGCCACATCTCTTACCTGGGCATCTTTGGCCATGGGGTATTATCTTAGCTCAGTGATTGTTTCTCTAGTTAACGATGTTTCAGGCAAATACTCCAAGCACAAATGGCTCTCTGGAAGCAACCTAAACCATTACCATCTTGAGAGATTCTACTGGCTCATGTGTGTTCTCAGTGGATTAAATTTCTTACACTACCTTTTCTGGGCCACCAGATACAAATACAGACCAGGAAGACCAAATAAGTAA

Protein Analysis

589

Amino Acids

64.65

Weight (kDa)

8.98

Isoelectric Point (pI)

44.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 964
Acc36I ACCTGC 1 cut(s) 964
AciI CCGC 7 cut(s) 76, 96, 116, 206, 597, 600, 611
AclI AACGTT 1 cut(s) 1106
AclWI GGATC 2 cut(s) 1198, 1280
AcoI YGGCCR 3 cut(s) 207, 1524, 1551
AcsI RAATTY 4 cut(s) 323, 953, 1484, 1702
AcuI CTGAAG 2 cut(s) 392, 1415
AcyI GRCGYC 1 cut(s) 908
AfaI GTAC 2 cut(s) 313, 1436
AfiI CCNNNNNNNGG 5 cut(s) 463, 509, 610, 1377, 1723
AgsI TTSAA 4 cut(s) 425, 571, 769, 1156
AhdI GACNNNNNGTC 1 cut(s) 810
AjnI CCWGG 2 cut(s) 1538, 1747
AjuI GAANNNNNNNTTGG 4 cut(s) 645, 677, 835, 867
Alw21I GWGCWC 2 cut(s) 26, 536
AlwI GGATC 2 cut(s) 1198, 1280
AlwNI CAGNNNCTG 2 cut(s) 19, 320
Ama87I CYCGRG 1 cut(s) 1375
AoxI GGCC 9 cut(s) 73, 207, 249, 454, 601, 837, 1524, 1551, 1725
ApeKI GCWGC 8 cut(s) 16, 62, 437, 782, 968, 1086, 1124, 1334
ApoI RAATTY 4 cut(s) 323, 953, 1484, 1702
AspLEI GCGC 1 cut(s) 973
AspS9I GGNCC 3 cut(s) 250, 838, 1725
AsuHPI GGTGA 2 cut(s) 625, 988
AvaI CYCGRG 1 cut(s) 1375
BaeGI GKGCMC 1 cut(s) 236
BalI TGGCCA 2 cut(s) 1526, 1553
BanII GRGCYC 1 cut(s) 497
BauI CACGAG 1 cut(s) 741
BbsI GAAGAC 2 cut(s) 1186, 1759
Bbv12I GWGCWC 2 cut(s) 26, 536
BbvI GCAGC 8 cut(s) 28, 49, 424, 769, 980, 1073, 1111, 1346
BccI CCATC 6 cut(s) 24, 205, 642, 1079, 1322, 1665
BcgI CGANNNNNNTGC 2 cut(s) 1233, 1267
BciT130I CCWGG 2 cut(s) 1540, 1749
BclI TGATCA 1 cut(s) 922
BfaI CTAG 3 cut(s) 1001, 1208, 1589
BfmI CTRYAG 2 cut(s) 1188, 1452
BfuAI ACCTGC 1 cut(s) 964
BglI GCCNNNNNGGC 1 cut(s) 84
BglII AGATCT 1 cut(s) 1517
BlpI GCTNAGC 4 cut(s) 20, 516, 1090, 1095
BmcAI AGTACT 1 cut(s) 1436
Bme1390I CCNGG 2 cut(s) 1540, 1749
BmeRI GACNNNNNGTC 1 cut(s) 810
BmeT110I CYCGRG 1 cut(s) 1375
BmgT120I GGNCC 3 cut(s) 250, 838, 1725
BmiI GGNNCC 3 cut(s) 496, 715, 840
BmrFI CCNGG 2 cut(s) 1540, 1749
BmsI GCATC 2 cut(s) 265, 1553
BpiI GAAGAC 2 cut(s) 1186, 1759
BpmI CTGGAG 1 cut(s) 70
Bpu1102I GCTNAGC 4 cut(s) 20, 516, 1090, 1095
BpuEI CTTGAG 1 cut(s) 1682
BsaAI YACGTR 1 cut(s) 580
BsaBI GATNNNNATC 1 cut(s) 927
BsaHI GRCGYC 1 cut(s) 908
BsaJI CCNNGG 7 cut(s) 79, 894, 1131, 1374, 1444, 1539, 1554
Bsc4I CCNNNNNNNGG 5 cut(s) 463, 509, 610, 1377, 1723
Bse1I ACTGG 5 cut(s) 53, 698, 867, 1214, 1679
Bse3DI GCAATG 5 cut(s) 825, 826, 1317, 1329, 1400
Bse8I GATNNNNATC 1 cut(s) 927
BseBI CCWGG 2 cut(s) 1540, 1749
BseDI CCNNGG 7 cut(s) 79, 894, 1131, 1374, 1444, 1539, 1554
BseGI GGATG 3 cut(s) 197, 653, 1233
BseJI GATNNNNATC 1 cut(s) 927
BseLI CCNNNNNNNGG 5 cut(s) 463, 509, 610, 1377, 1723
BseMI GCAATG 5 cut(s) 825, 826, 1317, 1329, 1400
BseMII CTCAG 5 cut(s) 11, 507, 1109, 1587, 1705
BseNI ACTGG 5 cut(s) 53, 698, 867, 1214, 1679
BseSI GKGCMC 1 cut(s) 236
BseXI GCAGC 8 cut(s) 28, 49, 424, 769, 980, 1073, 1111, 1346
BseYI CCCAGC 1 cut(s) 985
BshFI GGCC 9 cut(s) 75, 209, 251, 456, 603, 839, 1526, 1553, 1727
BsiHKAI GWGCWC 2 cut(s) 26, 536
BsiHKCI CYCGRG 1 cut(s) 1375
BslFI GGGAC 1 cut(s) 1145
BslI CCNNNNNNNGG 5 cut(s) 463, 509, 610, 1377, 1723
BsmFI GGGAC 1 cut(s) 1145
BsmI GAATGC 1 cut(s) 1010
BsnI GGCC 9 cut(s) 75, 209, 251, 456, 603, 839, 1526, 1553, 1727
BsoBI CYCGRG 1 cut(s) 1375
Bsp1286I GDGCHC 4 cut(s) 26, 236, 497, 536
Bsp143I GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
Bsp1720I GCTNAGC 4 cut(s) 20, 516, 1090, 1095
Bsp19I CCATGG 3 cut(s) 79, 1131, 1554
BspACI CCGC 7 cut(s) 76, 96, 116, 206, 597, 600, 611
BspANI GGCC 9 cut(s) 75, 209, 251, 456, 603, 839, 1526, 1553, 1727
BspCNI CTCAG 5 cut(s) 12, 508, 1108, 1586, 1704
BspHI TCATGA 1 cut(s) 1200
BspLI GGNNCC 3 cut(s) 496, 715, 840
BspMAI CTGCAG 1 cut(s) 1456
BspMI ACCTGC 1 cut(s) 964
BspPI GGATC 2 cut(s) 1198, 1280
BsrDI GCAATG 5 cut(s) 825, 826, 1317, 1329, 1400
BsrI ACTGG 5 cut(s) 53, 698, 867, 1214, 1679
BssECI CCNNGG 7 cut(s) 79, 894, 1131, 1374, 1444, 1539, 1554
BssMI GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
BssNI GRCGYC 1 cut(s) 908
BssSI CACGAG 1 cut(s) 741
BssT1I CCWWGG 4 cut(s) 79, 1131, 1444, 1554
Bst2BI CACGAG 1 cut(s) 741
Bst2UI CCWGG 2 cut(s) 1540, 1749
Bst4CI ACNGT 4 cut(s) 316, 349, 797, 1479
Bst6I CTCTTC 1 cut(s) 1466
BstACI GRCGYC 1 cut(s) 908
BstBAI YACGTR 1 cut(s) 580
BstDEI CTNAG 7 cut(s) 20, 516, 1090, 1095, 1568, 1573, 1691
BstDSI CCRYGG 4 cut(s) 79, 894, 1131, 1554
BstF5I GGATG 3 cut(s) 197, 653, 1233
BstHHI GCGC 1 cut(s) 973
BstKTI GATC 6 cut(s) 560, 925, 931, 1206, 1275, 1520
BstMBI GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
BstMWI GCNNNNNNNGC 9 cut(s) 84, 143, 594, 836, 914, 995, 1334, 1550, 1627
BstNI CCWGG 2 cut(s) 1540, 1749
BstNSI RCATGY 2 cut(s) 91, 387
BstSCI CCNGG 2 cut(s) 1538, 1747
BstSFI CTRYAG 2 cut(s) 1188, 1452
BstSLI GKGCMC 1 cut(s) 236
BstSNI TACGTA 1 cut(s) 580
BstV1I GCAGC 8 cut(s) 28, 49, 424, 769, 980, 1073, 1111, 1346
BstV2I GAAGAC 2 cut(s) 1186, 1759
BstX2I RGATCY 1 cut(s) 1517
BstYI RGATCY 1 cut(s) 1517
BsuRI GGCC 9 cut(s) 75, 209, 251, 456, 603, 839, 1526, 1553, 1727
BtgI CCRYGG 4 cut(s) 79, 894, 1131, 1554
BtsCI GGATG 3 cut(s) 197, 653, 1233
BtsI GCAGTG 1 cut(s) 912
BtsIMutI CAGTG 6 cut(s) 354, 368, 752, 912, 1581, 1699
BveI ACCTGC 1 cut(s) 964
CaiI CAGNNNCTG 2 cut(s) 19, 320
CciI TCATGA 1 cut(s) 1200
CfoI GCGC 1 cut(s) 973
Cfr13I GGNCC 3 cut(s) 250, 838, 1725
CseI GACGC 2 cut(s) 625, 897
Csp6I GTAC 2 cut(s) 312, 1435
CviQI GTAC 2 cut(s) 312, 1435
DdeI CTNAG 7 cut(s) 20, 516, 1090, 1095, 1568, 1573, 1691
DpnI GATC 6 cut(s) 559, 924, 930, 1205, 1274, 1519
DpnII GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
DriI GACNNNNNGTC 1 cut(s) 810
EaeI YGGCCR 3 cut(s) 207, 1524, 1551
Eam1104I CTCTTC 1 cut(s) 1466
Eam1105I GACNNNNNGTC 1 cut(s) 810
EarI CTCTTC 1 cut(s) 1466
EciI GGCGGA 1 cut(s) 131
Eco105I TACGTA 1 cut(s) 580
Eco130I CCWWGG 4 cut(s) 79, 1131, 1444, 1554
Eco147I AGGCCT 1 cut(s) 456
Eco24I GRGCYC 1 cut(s) 497
Eco57I CTGAAG 2 cut(s) 392, 1415
Eco88I CYCGRG 1 cut(s) 1375
EcoRII CCWGG 2 cut(s) 1538, 1747
EcoT14I CCWWGG 4 cut(s) 79, 1131, 1444, 1554
EcoT22I ATGCAT 1 cut(s) 189
EcoT38I GRGCYC 1 cut(s) 497
ErhI CCWWGG 4 cut(s) 79, 1131, 1444, 1554
FalI AAGNNNNNCTT 2 cut(s) 482, 514
FaqI GGGAC 1 cut(s) 1145
FbaI TGATCA 1 cut(s) 922
FokI GGATG 3 cut(s) 184, 660, 1220
FriOI GRGCYC 1 cut(s) 497
FspBI CTAG 3 cut(s) 1001, 1208, 1589
GlaI GCGC 1 cut(s) 972
GsaI CCCAGC 1 cut(s) 989
GsuI CTGGAG 1 cut(s) 70
HaeIII GGCC 9 cut(s) 75, 209, 251, 456, 603, 839, 1526, 1553, 1727
HgaI GACGC 2 cut(s) 625, 897
HhaI GCGC 1 cut(s) 973
Hin1I GRCGYC 1 cut(s) 908
Hin6I GCGC 1 cut(s) 971
HinP1I GCGC 1 cut(s) 971
HincII GTYRAC 2 cut(s) 46, 1594
HindII GTYRAC 2 cut(s) 46, 1594
HindIII AAGCTT 1 cut(s) 1142
HinfI GANTC 3 cut(s) 1296, 1388, 1668
HpaI GTTAAC 2 cut(s) 46, 1594
HphI GGTGA 2 cut(s) 625, 988
Hpy166II GTNNAC 5 cut(s) 46, 752, 912, 979, 1594
Hpy188I TCNGA 3 cut(s) 71, 274, 1264
Hpy188III TCNNGA 6 cut(s) 392, 926, 1201, 1345, 1635, 1661
Hpy8I GTNNAC 5 cut(s) 46, 752, 912, 979, 1594
HpyCH4III ACNGT 4 cut(s) 316, 349, 797, 1479
HpyCH4IV ACGT 2 cut(s) 579, 1106
HpyF10VI GCNNNNNNNGC 9 cut(s) 84, 143, 594, 836, 914, 995, 1334, 1550, 1627
HpyF3I CTNAG 7 cut(s) 20, 516, 1090, 1095, 1568, 1573, 1691
HpySE526I ACGT 2 cut(s) 579, 1106
Hsp92I GRCGYC 1 cut(s) 908
HspAI GCGC 1 cut(s) 971
Ksp22I TGATCA 1 cut(s) 922
KspAI GTTAAC 2 cut(s) 46, 1594
Kzo9I GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
LmnI GCTCC 3 cut(s) 500, 512, 719
Lsp1109I GCAGC 8 cut(s) 28, 49, 424, 769, 980, 1073, 1111, 1346
LweI GCATC 2 cut(s) 265, 1553
MaeI CTAG 3 cut(s) 1001, 1208, 1589
MaeII ACGT 2 cut(s) 579, 1106
MaeIII GTNAC 3 cut(s) 217, 316, 613
MalI GATC 6 cut(s) 559, 924, 930, 1205, 1274, 1519
MboI GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
MboII GAAGA 8 cut(s) 559, 843, 1037, 1186, 1219, 1453, 1483, 1764
MfeI CAATTG 1 cut(s) 1081
MflI RGATCY 1 cut(s) 1517
MhlI GDGCHC 4 cut(s) 26, 236, 497, 536
MlsI TGGCCA 2 cut(s) 1526, 1553
MluNI TGGCCA 2 cut(s) 1526, 1553
MlyI GAGTC 1 cut(s) 1382
MmeI TCCRAC 3 cut(s) 460, 881, 1461
Mox20I TGGCCA 2 cut(s) 1526, 1553
Mph1103I ATGCAT 1 cut(s) 189
MscI TGGCCA 2 cut(s) 1526, 1553
MseI TTAA 5 cut(s) 45, 335, 1350, 1593, 1700
MslI CAYNNNNRTG 4 cut(s) 382, 1003, 1073, 1322
Msp20I TGGCCA 2 cut(s) 1526, 1553
MspA1I CMGCKG 1 cut(s) 19
MspR9I CCNGG 2 cut(s) 1540, 1749
MunI CAATTG 1 cut(s) 1081
Mva1269I GAATGC 1 cut(s) 1010
MvaI CCWGG 2 cut(s) 1540, 1749
MwoI GCNNNNNNNGC 9 cut(s) 84, 143, 594, 836, 914, 995, 1334, 1550, 1627
NcoI CCATGG 3 cut(s) 79, 1131, 1554
NdeII GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
NlaIV GGNNCC 3 cut(s) 496, 715, 840
NmuCI GTSAC 2 cut(s) 217, 613
NsiI ATGCAT 1 cut(s) 189
NspI RCATGY 2 cut(s) 91, 387
PaeI GCATGC 1 cut(s) 91
PagI TCATGA 1 cut(s) 1200
PaqCI CACCTGC 1 cut(s) 964
PceI AGGCCT 1 cut(s) 456
PctI GAATGC 1 cut(s) 1010
PfeI GAWTC 2 cut(s) 1296, 1668
PleI GAGTC 1 cut(s) 1382
PpsI GAGTC 1 cut(s) 1382
Ppu21I YACGTR 1 cut(s) 580
Psp1406I AACGTT 1 cut(s) 1106
Psp6I CCWGG 2 cut(s) 1538, 1747
PspFI CCCAGC 1 cut(s) 985
PspGI CCWGG 2 cut(s) 1538, 1747
PspN4I GGNNCC 3 cut(s) 496, 715, 840
PspPI GGNCC 3 cut(s) 250, 838, 1725
PstI CTGCAG 1 cut(s) 1456
PstNI CAGNNNCTG 2 cut(s) 19, 320
PsuI RGATCY 1 cut(s) 1517
PvuII CAGCTG 1 cut(s) 19
RsaI GTAC 2 cut(s) 313, 1436
RsaNI GTAC 2 cut(s) 312, 1435
RseI CAYNNNNRTG 4 cut(s) 382, 1003, 1073, 1322
SaqAI TTAA 5 cut(s) 45, 335, 1350, 1593, 1700
Sau3AI GATC 6 cut(s) 557, 922, 928, 1203, 1272, 1517
Sau96I GGNCC 3 cut(s) 250, 838, 1725
ScaI AGTACT 1 cut(s) 1436
SchI GAGTC 1 cut(s) 1382
ScrFI CCNGG 2 cut(s) 1540, 1749
SduI GDGCHC 4 cut(s) 26, 236, 497, 536
SfaNI GCATC 2 cut(s) 265, 1553
SfcI CTRYAG 2 cut(s) 1188, 1452
SmiMI CAYNNNNRTG 4 cut(s) 382, 1003, 1073, 1322
SmlI CTYRAG 1 cut(s) 1661
SmoI CTYRAG 1 cut(s) 1661
SnaBI TACGTA 1 cut(s) 580
SphI GCATGC 1 cut(s) 91
SseBI AGGCCT 1 cut(s) 456
SsiI CCGC 7 cut(s) 76, 96, 116, 206, 597, 600, 611
SspMI CTAG 3 cut(s) 1001, 1208, 1589
StuI AGGCCT 1 cut(s) 456
StyD4I CCNGG 2 cut(s) 1538, 1747
StyI CCWWGG 4 cut(s) 79, 1131, 1444, 1554
TaaI ACNGT 4 cut(s) 316, 349, 797, 1479
TaiI ACGT 2 cut(s) 582, 1109
TaqI TCGA 5 cut(s) 525, 1253, 1344, 1386, 1391
TatI WGTACW 2 cut(s) 311, 1434
TauI GCSGC 5 cut(s) 78, 98, 209, 600, 603
TfiI GAWTC 2 cut(s) 1296, 1668
Tru1I TTAA 5 cut(s) 45, 335, 1350, 1593, 1700
Tru9I TTAA 5 cut(s) 45, 335, 1350, 1593, 1700
TscAI CASTG 6 cut(s) 354, 375, 759, 919, 1581, 1699
TseFI GTSAC 2 cut(s) 217, 613
TseI GCWGC 8 cut(s) 16, 62, 437, 782, 968, 1086, 1124, 1334
Tsp45I GTSAC 2 cut(s) 217, 613
TspDTI ATGAA 4 cut(s) 217, 439, 1186, 1219
TspGWI ACGGA 1 cut(s) 911
TspRI CASTG 6 cut(s) 354, 375, 759, 919, 1581, 1699
XapI RAATTY 4 cut(s) 323, 953, 1484, 1702
XceI RCATGY 2 cut(s) 91, 387
XcmI CCANNNNNNNNNTGG 2 cut(s) 832, 1321
XspI CTAG 3 cut(s) 1001, 1208, 1589
ZrmI AGTACT 1 cut(s) 1436
Zsp2I ATGCAT 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.