Prupe.1G273800_v2.0.a1
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase FAB1D

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
27992290 .. 27996088
3799 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G273800.1

Sequence Viewer

Length: 1632 bp
ATGGAGACTGATCCTCCAAAGCAAACCAAAGCCACGGACAAGGAGACTGATCCTCCGAAACAAACCAAAGCCACGGACAAGGAGACTGATCCTCCGAAACAATCCAAAGCCACGGACATGGAGACTAATCCTCCGAAGCAAGCCAAAGCCACGGACAAGGAGACTCATCCTCCAAAGCAATCCAAAGCCACGGACATGGAGACTAATCCTCCGAAGCAAGCCAAAGCCATGGACGTGGAGACTGATCCTCCGAAGCAAACCATAGCATCATCTCAAGACCATCTCCTCCAGGTCCCCATCTCGTCCGAGGTGAGGGCCAATTGGATGCATGACCTTCCCATGCACCTTCTTGAGAGCATACTATCAGACTTACCTGTAAAGGAATCAGTGTGCACTAGCTGCATGTGCAAATCGTGGCATGATAATTTGTGGAGTTTTGTTTCTGCAGATGACACCTCTAAGTCTACTGAATCAGACTTCAAAAAGTCACTGGAGAAACTTCTTCAGAATCCGGCGTATTTCCTTAACGTCAGGTTAAGATGCACAAAATTTAAAAGGCACTCCTTCCTGCATGAGTTTCTTCGGGAACTGCTGAAAAAGAAAGTAATCAACCTGGAAATCGCAGTGGATCGTCATGAGAGTTTGGGATTTTTCCCCATCCCACCCGAAGTCTTTACAAGCATGCATCTTTGGGTCCTGAAGATAGCAAGCGCCAGAATTATTCTGTCTCCTCCAGGGACTTTCACAAGGTTGAGCGCTATACAAGTTGATGTATCTCGGTCATCTCACGCATCTATCCTTGACTTCTACAAGTGGTGTCCGGTGCTCCAGGATCTGCAAATACAAGGAAAAATTATGAGACTTCCGGACAAAAAGCAGAAATTCCAAATAAGGTCTCAGAGTCTCCTTAGACTAAAAATTACACTGCATCTTCACAAGCTACAGCTTGATAGAGGACAAAAAGTTTACCTTTCTGCTGGAAACCTCTATGAGGTTGACATTGATGCCCCCCAACTAGAAGTTTTGGATATAGATGAATCAATTTTTGCCAAGTTTAAGATCGGAAATTTCAAGCATCTCCGAGAAGTTAAGCTTCAAAGTGGCTTCTACGAAGCTAAGAGACAGCTAGGAGAAGTGGGGGAGCTTCTCGTTCTTTCGCGAGGGGTATTTTATACGATTAACCAAGCATCATTATCTACTAGCTGCCTGGTTGTGGGAGATGGAGCTTTTGGGGCATTGAGTTTTACGTTTATGGACTATCTTCTTAGTGGTAATGAAGCTGCGATCCGGAACAAATTTCGAATGACATTTCCAGATTTCTATCATGTCACGAGCTTGAGATTGTGTATAGCAGATTCTTCCGGTTGGCTGTTCATGCCATACTTGCTCGCACACCTTCCTAATTTACAAAGATTGGATCTCGAAGTGGTAGATAGGGAAGAAGTTCGAAAGGGCAAGAAATTTAAGTGGAATCCCCCAAAAGATCATGTGGGATGGTGTTTGACAAGCGTTAAACACGTTCGAATGATTGGATTTGGGGAAATGATGGAAGAAGCCAGTCGAATATTAGATTTTGTGAGGGAGGCTGCTACCGAAGAACGCTTTGAAGAAATTACCATCACCTATGAATAA

Protein Analysis

544

Amino Acids

62.16

Weight (kDa)

7.99

Isoelectric Point (pI)

49.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 464
AccII CGCG 1 cut(s) 1159
AccIII TCCGGA 2 cut(s) 865, 1287
AclWI GGATC 8 cut(s) 5, 44, 83, 239, 636, 840, 1279, 1425
AcsI RAATTY 5 cut(s) 548, 881, 1066, 1295, 1460
AcuI CTGAAG 2 cut(s) 488, 719
AfeI AGCGCT 1 cut(s) 757
AfiI CCNNNNNNNGG 3 cut(s) 312, 991, 1213
AflIII ACRYGT 1 cut(s) 1516
AgsI TTSAA 4 cut(s) 481, 1072, 1097, 1607
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 5 cut(s) 288, 612, 733, 828, 1206
Alw21I GWGCWC 2 cut(s) 395, 828
Alw44I GTGCAC 1 cut(s) 391
AlwI GGATC 8 cut(s) 5, 44, 83, 239, 636, 840, 1279, 1425
AlwNI CAGNNNCTG 1 cut(s) 835
Aor13HI TCCGGA 2 cut(s) 865, 1287
Aor51HI AGCGCT 1 cut(s) 757
AoxI GGCC 1 cut(s) 315
ApaLI GTGCAC 1 cut(s) 391
ApeKI GCWGC 4 cut(s) 399, 1203, 1280, 1586
ApoI RAATTY 5 cut(s) 548, 881, 1066, 1295, 1460
Asp700I GAANNNNTTC 1 cut(s) 1443
AspLEI GCGC 2 cut(s) 713, 758
AspS9I GGNCC 3 cut(s) 292, 315, 694
AsuHPI GGTGA 2 cut(s) 322, 1612
AsuII TTCGAA 3 cut(s) 1300, 1447, 1522
AvaII GGWCC 2 cut(s) 292, 694
BaeGI GKGCMC 1 cut(s) 395
BauI CACGAG 1 cut(s) 1330
Bbv12I GWGCWC 2 cut(s) 395, 828
BbvI GCAGC 4 cut(s) 386, 1190, 1267, 1573
BccI CCATC 7 cut(s) 288, 305, 665, 1214, 1488, 1540, 1625
BciT130I CCWGG 5 cut(s) 290, 614, 735, 830, 1208
BfaI CTAG 4 cut(s) 396, 1016, 1127, 1200
BfmI CTRYAG 2 cut(s) 444, 941
BfoI RGCGCY 2 cut(s) 714, 759
BisI GCNGC 4 cut(s) 400, 1204, 1281, 1587
BlsI GCNGC 4 cut(s) 401, 1205, 1282, 1588
Bme1390I CCNGG 5 cut(s) 290, 614, 735, 830, 1208
Bme18I GGWCC 2 cut(s) 292, 694
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 3 cut(s) 292, 315, 694
BmiI GGNNCC 2 cut(s) 294, 695
BmrFI CCNGG 5 cut(s) 290, 614, 735, 830, 1208
BmsI GCATC 9 cut(s) 275, 315, 530, 694, 800, 937, 994, 1084, 1196
BpmI CTGGAG 4 cut(s) 272, 512, 717, 812
Bpu14I TTCGAA 3 cut(s) 1300, 1447, 1522
BpuEI CTTGAG 3 cut(s) 258, 371, 1357
BsaBI GATNNNNATC 1 cut(s) 1320
BsaI GGTCTC 1 cut(s) 900
BsaJI CCNNGG 8 cut(s) 33, 72, 111, 150, 189, 228, 306, 734
BsaWI WCCGGW 4 cut(s) 820, 865, 1287, 1361
Bsc4I CCNNNNNNNGG 3 cut(s) 312, 991, 1213
Bse1I ACTGG 2 cut(s) 495, 1557
Bse8I GATNNNNATC 1 cut(s) 1320
BseAI TCCGGA 2 cut(s) 865, 1287
BseBI CCWGG 5 cut(s) 290, 614, 735, 830, 1208
BseDI CCNNGG 8 cut(s) 33, 72, 111, 150, 189, 228, 306, 734
BseGI GGATG 4 cut(s) 166, 330, 657, 1499
BseJI GATNNNNATC 1 cut(s) 1320
BseLI CCNNNNNNNGG 3 cut(s) 312, 991, 1213
BseMII CTCAG 1 cut(s) 911
BseNI ACTGG 2 cut(s) 495, 1557
BseRI GAGGAG 2 cut(s) 275, 720
BseSI GKGCMC 1 cut(s) 395
BseXI GCAGC 4 cut(s) 386, 1190, 1267, 1573
Bsh1236I CGCG 1 cut(s) 1159
BshFI GGCC 1 cut(s) 317
BsiHKAI GWGCWC 2 cut(s) 395, 828
BsiSI CCGG 5 cut(s) 512, 821, 866, 1288, 1362
BslFI GGGAC 2 cut(s) 278, 751
BslI CCNNNNNNNGG 3 cut(s) 312, 991, 1213
BsmFI GGGAC 2 cut(s) 278, 751
BsnI GGCC 1 cut(s) 317
Bso31I GGTCTC 1 cut(s) 900
Bsp119I TTCGAA 3 cut(s) 1300, 1447, 1522
Bsp1286I GDGCHC 2 cut(s) 395, 828
Bsp13I TCCGGA 2 cut(s) 865, 1287
Bsp19I CCATGG 1 cut(s) 228
Bsp68I TCGCGA 1 cut(s) 1159
BspANI GGCC 1 cut(s) 317
BspCNI CTCAG 1 cut(s) 910
BspEI TCCGGA 2 cut(s) 865, 1287
BspFNI CGCG 1 cut(s) 1159
BspHI TCATGA 1 cut(s) 634
BspLI GGNNCC 2 cut(s) 294, 695
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 8 cut(s) 5, 44, 83, 239, 636, 840, 1279, 1425
BspT104I TTCGAA 3 cut(s) 1300, 1447, 1522
BspTNI GGTCTC 1 cut(s) 900
BsrI ACTGG 2 cut(s) 495, 1557
BssECI CCNNGG 8 cut(s) 33, 72, 111, 150, 189, 228, 306, 734
BssSI CACGAG 1 cut(s) 1330
BssT1I CCWWGG 1 cut(s) 228
Bst2BI CACGAG 1 cut(s) 1330
Bst2UI CCWGG 5 cut(s) 290, 614, 735, 830, 1208
BstAPI GCANNNNNTGC 1 cut(s) 399
BstBI TTCGAA 3 cut(s) 1300, 1447, 1522
BstC8I GCNNGC 5 cut(s) 141, 219, 683, 709, 1389
BstDEI CTNAG 5 cut(s) 459, 897, 908, 1116, 1265
BstDSI CCRYGG 6 cut(s) 33, 72, 111, 150, 189, 228
BstENI CCTNNNNNAGG 1 cut(s) 989
BstF5I GGATG 4 cut(s) 166, 330, 657, 1499
BstFNI CGCG 1 cut(s) 1159
BstH2I RGCGCY 2 cut(s) 714, 759
BstHHI GCGC 2 cut(s) 713, 758
BstMWI GCNNNNNNNGC 5 cut(s) 399, 405, 1232, 1375, 1384
BstNI CCWGG 5 cut(s) 290, 614, 735, 830, 1208
BstNSI RCATGY 2 cut(s) 406, 685
BstSCI CCNGG 5 cut(s) 288, 612, 733, 828, 1206
BstSFI CTRYAG 2 cut(s) 444, 941
BstSLI GKGCMC 1 cut(s) 395
BstUI CGCG 1 cut(s) 1159
BstV1I GCAGC 4 cut(s) 386, 1190, 1267, 1573
BstX2I RGATCY 2 cut(s) 832, 1417
BstXI CCANNNNNNTGG 4 cut(s) 118, 196, 229, 235
BstYI RGATCY 2 cut(s) 832, 1417
BsuRI GGCC 1 cut(s) 317
BtgI CCRYGG 6 cut(s) 33, 72, 111, 150, 189, 228
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 4 cut(s) 166, 330, 657, 1499
BtsI GCAGTG 2 cut(s) 630, 923
BtsIMutI CAGTG 4 cut(s) 393, 488, 630, 923
BtuMI TCGCGA 1 cut(s) 1159
Cac8I GCNNGC 5 cut(s) 141, 219, 683, 709, 1389
CaiI CAGNNNCTG 1 cut(s) 835
CciI TCATGA 1 cut(s) 634
CfoI GCGC 2 cut(s) 713, 758
Cfr13I GGNCC 3 cut(s) 292, 315, 694
DdeI CTNAG 5 cut(s) 459, 897, 908, 1116, 1265
DraI TTTAAA 1 cut(s) 553
Eco130I CCWWGG 1 cut(s) 228
Eco31I GGTCTC 1 cut(s) 900
Eco47I GGWCC 2 cut(s) 292, 694
Eco47III AGCGCT 1 cut(s) 757
Eco57I CTGAAG 2 cut(s) 488, 719
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoO109I RGGNCCY 2 cut(s) 292, 694
EcoRII CCWGG 5 cut(s) 288, 612, 733, 828, 1206
EcoT14I CCWWGG 1 cut(s) 228
EcoT22I ATGCAT 2 cut(s) 330, 687
ErhI CCWWGG 1 cut(s) 228
FalI AAGNNNNNCTT 4 cut(s) 954, 986, 1077, 1109
FaqI GGGAC 2 cut(s) 278, 751
FblI GTMKAC 1 cut(s) 464
Fnu4HI GCNGC 4 cut(s) 400, 1204, 1281, 1587
FokI GGATG 4 cut(s) 153, 337, 644, 1506
Fsp4HI GCNGC 4 cut(s) 400, 1204, 1281, 1587
FspBI CTAG 4 cut(s) 396, 1016, 1127, 1200
GlaI GCGC 2 cut(s) 712, 757
GluI GCNGC 4 cut(s) 400, 1204, 1281, 1587
GsuI CTGGAG 4 cut(s) 272, 512, 717, 812
HaeII RGCGCY 2 cut(s) 714, 759
HaeIII GGCC 1 cut(s) 317
HapII CCGG 5 cut(s) 512, 821, 866, 1288, 1362
HhaI GCGC 2 cut(s) 713, 758
Hin6I GCGC 2 cut(s) 711, 756
HinP1I GCGC 2 cut(s) 711, 756
HincII GTYRAC 1 cut(s) 997
HindII GTYRAC 1 cut(s) 997
HindIII AAGCTT 1 cut(s) 1091
HinfI GANTC 8 cut(s) 163, 383, 470, 508, 901, 1037, 1355, 1471
HpaII CCGG 5 cut(s) 512, 821, 866, 1288, 1362
HphI GGTGA 2 cut(s) 322, 1612
Hpy166II GTNNAC 4 cut(s) 393, 465, 967, 997
Hpy8I GTNNAC 4 cut(s) 393, 465, 967, 997
HpyAV CCTTC 4 cut(s) 344, 356, 574, 1406
HpyCH4IV ACGT 4 cut(s) 234, 528, 1247, 1518
HpyF10VI GCNNNNNNNGC 5 cut(s) 399, 405, 1232, 1375, 1384
HpyF3I CTNAG 5 cut(s) 459, 897, 908, 1116, 1265
HpySE526I ACGT 4 cut(s) 234, 528, 1247, 1518
HspAI GCGC 2 cut(s) 711, 756
Kpn2I TCCGGA 2 cut(s) 865, 1287
LmnI GCTCC 3 cut(s) 831, 1141, 1223
Lsp1109I GCAGC 4 cut(s) 386, 1190, 1267, 1573
LweI GCATC 9 cut(s) 275, 315, 530, 694, 800, 937, 994, 1084, 1196
MaeI CTAG 4 cut(s) 396, 1016, 1127, 1200
MaeII ACGT 4 cut(s) 234, 528, 1247, 1518
MaeIII GTNAC 2 cut(s) 486, 1327
MfeI CAATTG 1 cut(s) 319
MflI RGATCY 2 cut(s) 832, 1417
MhlI GDGCHC 2 cut(s) 395, 828
MlyI GAGTC 2 cut(s) 157, 910
Mph1103I ATGCAT 2 cut(s) 330, 687
MroI TCCGGA 2 cut(s) 865, 1287
MroXI GAANNNNTTC 1 cut(s) 1443
MseI TTAA 8 cut(s) 525, 536, 552, 1056, 1089, 1179, 1464, 1512
MslI CAYNNNNRTG 3 cut(s) 116, 194, 233
MspI CCGG 5 cut(s) 512, 821, 866, 1288, 1362
MspR9I CCNGG 5 cut(s) 290, 614, 735, 830, 1208
MunI CAATTG 1 cut(s) 319
MvaI CCWGG 5 cut(s) 290, 614, 735, 830, 1208
MvnI CGCG 1 cut(s) 1159
MwoI GCNNNNNNNGC 5 cut(s) 399, 405, 1232, 1375, 1384
NcoI CCATGG 1 cut(s) 228
NlaIV GGNNCC 2 cut(s) 294, 695
NmuCI GTSAC 2 cut(s) 486, 1327
NruI TCGCGA 1 cut(s) 1159
NsiI ATGCAT 2 cut(s) 330, 687
NspI RCATGY 2 cut(s) 406, 685
NspV TTCGAA 3 cut(s) 1300, 1447, 1522
PaeI GCATGC 1 cut(s) 685
PagI TCATGA 1 cut(s) 634
PdmI GAANNNNTTC 1 cut(s) 1443
PfeI GAWTC 6 cut(s) 383, 470, 508, 1037, 1355, 1471
PfoI TCCNGGA 1 cut(s) 828
PkrI GCNGC 4 cut(s) 401, 1205, 1282, 1588
PleI GAGTC 2 cut(s) 157, 909
PpsI GAGTC 2 cut(s) 157, 909
PpuMI RGGWCCY 2 cut(s) 292, 694
Psp5II RGGWCCY 2 cut(s) 292, 694
Psp6I CCWGG 5 cut(s) 288, 612, 733, 828, 1206
PspGI CCWGG 5 cut(s) 288, 612, 733, 828, 1206
PspN4I GGNNCC 2 cut(s) 294, 695
PspPI GGNCC 3 cut(s) 292, 315, 694
PspPPI RGGWCCY 2 cut(s) 292, 694
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 835
PsuI RGATCY 2 cut(s) 832, 1417
RruI TCGCGA 1 cut(s) 1159
RseI CAYNNNNRTG 3 cut(s) 116, 194, 233
SaqAI TTAA 8 cut(s) 525, 536, 552, 1056, 1089, 1179, 1464, 1512
SatI GCNGC 4 cut(s) 400, 1204, 1281, 1587
Sau96I GGNCC 3 cut(s) 292, 315, 694
SchI GAGTC 2 cut(s) 157, 910
ScrFI CCNGG 5 cut(s) 290, 614, 735, 830, 1208
SduI GDGCHC 2 cut(s) 395, 828
SfaNI GCATC 9 cut(s) 275, 315, 530, 694, 800, 937, 994, 1084, 1196
SfcI CTRYAG 2 cut(s) 444, 941
SfuI TTCGAA 3 cut(s) 1300, 1447, 1522
SinI GGWCC 2 cut(s) 292, 694
SmiMI CAYNNNNRTG 3 cut(s) 116, 194, 233
SmlI CTYRAG 3 cut(s) 273, 350, 1336
SmoI CTYRAG 3 cut(s) 273, 350, 1336
SphI GCATGC 1 cut(s) 685
SspI AATATT 1 cut(s) 1566
SspMI CTAG 4 cut(s) 396, 1016, 1127, 1200
StyD4I CCNGG 5 cut(s) 288, 612, 733, 828, 1206
StyI CCWWGG 1 cut(s) 228
TaiI ACGT 4 cut(s) 237, 531, 1250, 1521
TaqI TCGA 5 cut(s) 1300, 1422, 1447, 1522, 1561
TaqII GACCGA 1 cut(s) 768
TfiI GAWTC 6 cut(s) 383, 470, 508, 1037, 1355, 1471
Tru1I TTAA 8 cut(s) 525, 536, 552, 1056, 1089, 1179, 1464, 1512
Tru9I TTAA 8 cut(s) 525, 536, 552, 1056, 1089, 1179, 1464, 1512
TscAI CASTG 4 cut(s) 393, 495, 630, 930
TseFI GTSAC 2 cut(s) 486, 1327
TseI GCWGC 4 cut(s) 399, 1203, 1280, 1586
Tsp45I GTSAC 2 cut(s) 486, 1327
TspDTI ATGAA 3 cut(s) 1050, 1290, 1363
TspGWI ACGGA 5 cut(s) 50, 89, 128, 167, 206
TspRI CASTG 4 cut(s) 393, 495, 630, 930
VneI GTGCAC 1 cut(s) 391
VpaK11BI GGWCC 2 cut(s) 292, 694
XagI CCTNNNNNAGG 1 cut(s) 989
XapI RAATTY 5 cut(s) 548, 881, 1066, 1295, 1460
XceI RCATGY 2 cut(s) 406, 685
XmiI GTMKAC 1 cut(s) 464
XmnI GAANNNNTTC 1 cut(s) 1443
XspI CTAG 4 cut(s) 396, 1016, 1127, 1200
Zsp2I ATGCAT 2 cut(s) 330, 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.