Rh2BG417800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
58937894 .. 58938193
300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG417800.1

Sequence Viewer

Length: 216 bp
ATGATTGGCTGGAAAGTTCTACCGTATCTACTGGACAGAACTCCAGTAGTGGAGGTCCTTGCAATAGAAATGGGACACGTTGCTGAGGGTGACAGGTATGCTTGGGATCCACCAATCCAGAGGCCTGGATGTTTGACTCACATCATTCAAGAAGTGCAGCTTAGGGGGTTTCATGGGAACGATGAGTTATTGGCAGTGGTTGAGTACTTTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

8.14

Weight (kDa)

4.87

Isoelectric Point (pI)

38.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 101, 114
AfaI GTAC 1 cut(s) 206
AflIII ACRYGT 1 cut(s) 76
AgsI TTSAA 1 cut(s) 149
AjnI CCWGG 1 cut(s) 124
AluBI AGCT 1 cut(s) 160
AluI AGCT 1 cut(s) 160
AlwI GGATC 2 cut(s) 101, 114
AoxI GGCC 1 cut(s) 122
ApeKI GCWGC 1 cut(s) 157
AspS9I GGNCC 1 cut(s) 55
AsuHPI GGTGA 1 cut(s) 101
AvaII GGWCC 1 cut(s) 55
BamHI GGATCC 1 cut(s) 106
BbvCI CCTCAGC 1 cut(s) 84
BbvI GCAGC 1 cut(s) 169
BciT130I CCWGG 1 cut(s) 126
BisI GCNGC 1 cut(s) 158
BlsI GCNGC 1 cut(s) 159
BmcAI AGTACT 1 cut(s) 206
Bme1390I CCNGG 1 cut(s) 126
Bme18I GGWCC 1 cut(s) 55
BmgT120I GGNCC 1 cut(s) 55
BmiI GGNNCC 1 cut(s) 108
BmrFI CCNGG 1 cut(s) 126
BpmI CTGGAG 1 cut(s) 27
Bpu10I CCTNAGC 2 cut(s) 84, 161
Bse1I ACTGG 2 cut(s) 36, 44
BseBI CCWGG 1 cut(s) 126
BseGI GGATG 1 cut(s) 134
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 2 cut(s) 36, 44
BseXI GCAGC 1 cut(s) 169
BsgI GTGCAG 1 cut(s) 176
BshFI GGCC 1 cut(s) 124
BslFI GGGAC 1 cut(s) 87
BsmFI GGGAC 1 cut(s) 87
BsnI GGCC 1 cut(s) 124
Bsp143I GATC 1 cut(s) 106
BspANI GGCC 1 cut(s) 124
BspCNI CTCAG 1 cut(s) 76
BspLI GGNNCC 1 cut(s) 108
BspPI GGATC 2 cut(s) 101, 114
BsrI ACTGG 2 cut(s) 36, 44
BssMI GATC 1 cut(s) 106
Bst2UI CCWGG 1 cut(s) 126
Bst4CI ACNGT 1 cut(s) 24
BstDEI CTNAG 2 cut(s) 84, 161
BstF5I GGATG 1 cut(s) 134
BstKTI GATC 1 cut(s) 109
BstMBI GATC 1 cut(s) 106
BstNI CCWGG 1 cut(s) 126
BstSCI CCNGG 1 cut(s) 124
BstV1I GCAGC 1 cut(s) 169
BstX2I RGATCY 1 cut(s) 106
BstXI CCANNNNNNTGG 1 cut(s) 125
BstYI RGATCY 1 cut(s) 106
BsuRI GGCC 1 cut(s) 124
BtsCI GGATG 1 cut(s) 134
BtsI GCAGTG 1 cut(s) 201
BtsIMutI CAGTG 1 cut(s) 201
Cfr13I GGNCC 1 cut(s) 55
Csp6I GTAC 1 cut(s) 205
CviAII CATG 1 cut(s) 173
CviJI RGCY 3 cut(s) 9, 124, 160
CviKI_1 RGCY 3 cut(s) 9, 124, 160
CviQI GTAC 1 cut(s) 205
DdeI CTNAG 2 cut(s) 84, 161
DpnI GATC 1 cut(s) 108
DpnII GATC 1 cut(s) 106
Eco147I AGGCCT 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 55
EcoO109I RGGNCCY 1 cut(s) 55
EcoRII CCWGG 1 cut(s) 124
FaeI CATG 1 cut(s) 176
FaiI YATR 2 cut(s) 99, 174
FalI AAGNNNNNCTT 2 cut(s) 144, 176
FaqI GGGAC 1 cut(s) 87
FatI CATG 1 cut(s) 172
Fnu4HI GCNGC 1 cut(s) 158
FokI GGATG 1 cut(s) 141
Fsp4HI GCNGC 1 cut(s) 158
GluI GCNGC 1 cut(s) 158
GsuI CTGGAG 1 cut(s) 27
HaeIII GGCC 1 cut(s) 124
Hin1II CATG 1 cut(s) 176
HinfI GANTC 1 cut(s) 136
HphI GGTGA 1 cut(s) 101
Hpy188III TCNNGA 2 cut(s) 118, 149
HpyCH4III ACNGT 1 cut(s) 24
HpyCH4IV ACGT 1 cut(s) 78
HpyCH4V TGCA 2 cut(s) 62, 157
HpyF3I CTNAG 2 cut(s) 84, 161
HpySE526I ACGT 1 cut(s) 78
Hsp92II CATG 1 cut(s) 176
Kzo9I GATC 1 cut(s) 106
LpnPI CCDG 6 cut(s) 17, 57, 79, 111, 131, 138
Lsp1109I GCAGC 1 cut(s) 169
MaeII ACGT 1 cut(s) 78
MaeIII GTNAC 1 cut(s) 89
MalI GATC 1 cut(s) 108
MboI GATC 1 cut(s) 106
MflI RGATCY 1 cut(s) 106
MlyI GAGTC 1 cut(s) 130
MnlI CCTC 3 cut(s) 46, 79, 114
MspR9I CCNGG 1 cut(s) 126
MvaI CCWGG 1 cut(s) 126
NdeII GATC 1 cut(s) 106
NlaIII CATG 1 cut(s) 176
NlaIV GGNNCC 1 cut(s) 108
NmuCI GTSAC 1 cut(s) 89
PceI AGGCCT 1 cut(s) 124
PkrI GCNGC 1 cut(s) 159
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
PpuMI RGGWCCY 1 cut(s) 55
Psp5II RGGWCCY 1 cut(s) 55
Psp6I CCWGG 1 cut(s) 124
PspGI CCWGG 1 cut(s) 124
PspN4I GGNNCC 1 cut(s) 108
PspPI GGNCC 1 cut(s) 55
PspPPI RGGWCCY 1 cut(s) 55
PsuI RGATCY 1 cut(s) 106
RsaI GTAC 1 cut(s) 206
RsaNI GTAC 1 cut(s) 205
SatI GCNGC 1 cut(s) 158
Sau3AI GATC 1 cut(s) 106
Sau96I GGNCC 1 cut(s) 55
ScaI AGTACT 1 cut(s) 206
SchI GAGTC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 126
SetI ASST 4 cut(s) 57, 81, 98, 162
SinI GGWCC 1 cut(s) 55
SseBI AGGCCT 1 cut(s) 124
StuI AGGCCT 1 cut(s) 124
StyD4I CCNGG 1 cut(s) 124
TaaI ACNGT 1 cut(s) 24
TaiI ACGT 1 cut(s) 81
TatI WGTACW 1 cut(s) 204
TscAI CASTG 1 cut(s) 201
TseFI GTSAC 1 cut(s) 89
TseI GCWGC 1 cut(s) 157
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 1 cut(s) 161
TspRI CASTG 1 cut(s) 201
VpaK11BI GGWCC 1 cut(s) 55
ZrmI AGTACT 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.