Prupe.1G276300_v2.0.a1
MYB Family

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
28157190 .. 28160241
3052 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G276300.1

Sequence Viewer

Length: 1437 bp
ATGTTAACCATTAGCATTTGTGACAAGAAAGGAAATGAAGGCATGGCAAACAATGGGGCTATATATGTAACAGAAAACCCAAATGCCTTCAGCTGCTTCTCCTCTGCTCCCTCCTTTTCCTCTTCTTCTCCCTCTTGTTCAATGGGAATGGTTTATGCAGATATGGGCTCTCTTTCACTTAGTTCCAACTATGGCGTTGTTTCATCTGTTTCTTCTCAGGAGAGTAGCTATATCTCAAAGCTTTCTGAAGTGGAAAATGGGAGGGGGTTTTGGGGTTTTCCTCCTATGGGGAACTGCAACAACAGAAGCTCTGAGGACTACCACCACAACACTGACATTGGTGACGGTAAGGGCTCAGATAGCAGCAGTGATCATGAGAGTGGGGAAAATAATCAGACTTGTATGAATGATCAGAAAGCCAACCTAATAAACCATGAGAAGTACCCTAATGAGAATGTGGTGATTGGTGGGAAGGAAACAGAAAGTGGGCAGTCAAAACATTGTGCCAGAGGGCATTGGAGGCCTGCAGAAGATTCCAAGCTCAAGGAACTTGTCGCTCTTTATGGCCCTCAGAATTGGAACCTCATAGCAGAGAAGTTGGAAGGAAGATCAGGTAAGAGCTGTAGACTAAGATGGTTTAACCAGTTGGACCCAAGGATCAACAGAAGAGCTTTTACTGAAGAAGAAGAAGATAGACTAATGCAAGCTCATAGAGTATATGGAAACAAATGGGCCATGATAGCTAGGCTCTTTCCTGGAAGAACTGATAATGCTGTCAAGAACCATTGGCATGTTATAATGGCCAGGAAGTACAGAGAACAATCCAGTGCTTACAGGAGGAGGAAGCTCAGTCAAACTGTTTACAGAAGAATGGAGGAAGATCCAAGCTTCAATGTCTCAAGGAGTACAGAGCCTCCATCTTATTGTAGTCTCAATCTCCCCCACAATGGAGGTCTCAGCAATAGCACTTTATCTCCTTTCTCATATGGAACAAGCTATAATGGTGTTGTTGGTTGGGGGGTTGACTATTATGGCTCAAATGGCTCACCCAACATGACCAGTGCGGAAGAAGAAGAAACAATCCCAAGCAAAAAAGTCCTTCCTTTCGAATTCTTCCCCGGTACCAAGAGGAATGAGGGGGTGATGGGGATGGTGAGCCAGAGCAGATCTTGGGATAGTTCAAGTGATATTGAGGGTCATTTATGTAACCTGCATCCTCACCATCAACCATACATGATGGCAATGCAACAGGCAAACTACCACAACCTTCTTCACAGTTACTCAGATTCATCAGTATCAGCATCACCACGTCAAGTTTCAGCCAGCAAACCCTCACCATCAGCTGCTGCTGCTGCAGATGAGGACAGAGTTGGTGGCAGCCACCATGAGACCCTTCCACCACCATTCATTGATTTTCTTGGGGTAGGAGCCACATGA

Protein Analysis

479

Amino Acids

52.9

Weight (kDa)

6.23

Isoelectric Point (pI)

58.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010448)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 797
Acc36I ACCTGC 1 cut(s) 1218
Acc65I GGTACC 1 cut(s) 1121
AccB1I GGYRCC 1 cut(s) 1121
AccI GTMKAC 1 cut(s) 625
AciI CCGC 1 cut(s) 1064
AclWI GGATC 2 cut(s) 665, 875
AcoI YGGCCR 1 cut(s) 801
AcsI RAATTY 1 cut(s) 1109
AcuI CTGAAG 3 cut(s) 73, 267, 699
AfaI GTAC 4 cut(s) 443, 812, 907, 1123
AfiI CCNNNNNNNGG 2 cut(s) 287, 947
AgsI TTSAA 3 cut(s) 141, 892, 1182
AjiI CACGTC 1 cut(s) 1310
AjnI CCWGG 2 cut(s) 754, 803
Alw26I GTCTC 4 cut(s) 901, 935, 959, 1382
AlwI GGATC 2 cut(s) 665, 875
AlwNI CAGNNNCTG 1 cut(s) 1346
AoxI GGCC 4 cut(s) 521, 565, 732, 801
ApeKI GCWGC 7 cut(s) 93, 363, 1343, 1346, 1349, 1352, 1377
ApoI RAATTY 1 cut(s) 1109
Asp718I GGTACC 1 cut(s) 1121
AspS9I GGNCC 3 cut(s) 566, 649, 732
AsuC2I CCSGG 1 cut(s) 1119
AsuHPI GGTGA 8 cut(s) 353, 472, 1038, 1153, 1165, 1211, 1296, 1326
AsuII TTCGAA 1 cut(s) 1107
AvaII GGWCC 1 cut(s) 649
BalI TGGCCA 1 cut(s) 803
BanI GGYRCC 1 cut(s) 1121
BanII GRGCYC 2 cut(s) 170, 356
BarI GAAGNNNNNNTAC 2 cut(s) 658, 690
BbvI GCAGC 7 cut(s) 80, 375, 1330, 1333, 1336, 1339, 1389
BccI CCATC 7 cut(s) 627, 925, 1138, 1144, 1230, 1231, 1345
BciT130I CCWGG 2 cut(s) 756, 805
BclI TGATCA 2 cut(s) 370, 409
BcnI CCSGG 1 cut(s) 1119
BcoDI GTCTC 4 cut(s) 901, 935, 959, 1382
BfaI CTAG 1 cut(s) 744
BfmI CTRYAG 3 cut(s) 525, 622, 1353
BfuAI ACCTGC 1 cut(s) 1218
BglII AGATCT 1 cut(s) 1166
BisI GCNGC 7 cut(s) 94, 364, 1344, 1347, 1350, 1353, 1378
BlsI GCNGC 7 cut(s) 95, 365, 1345, 1348, 1351, 1354, 1379
Bme1390I CCNGG 3 cut(s) 756, 805, 1119
Bme18I GGWCC 1 cut(s) 649
BmgBI CACGTC 1 cut(s) 1310
BmgT120I GGNCC 3 cut(s) 566, 649, 732
BmiI GGNNCC 4 cut(s) 581, 651, 1123, 1429
BmrFI CCNGG 3 cut(s) 756, 805, 1119
BmsI GCATC 2 cut(s) 1222, 1310
Bpu14I TTCGAA 1 cut(s) 1107
BpuEI CTTGAG 2 cut(s) 527, 883
BpuMI CCSGG 1 cut(s) 1119
BsaI GGTCTC 2 cut(s) 959, 1382
BsaJI CCNNGG 2 cut(s) 653, 1117
BsaXI ACNNNNNCTCC 4 cut(s) 898, 928, 958, 988
Bsc4I CCNNNNNNNGG 2 cut(s) 287, 947
Bse1I ACTGG 3 cut(s) 643, 825, 1059
Bse3DI GCAATG 1 cut(s) 1248
BseBI CCWGG 2 cut(s) 756, 805
BseDI CCNNGG 2 cut(s) 653, 1117
BseGI GGATG 2 cut(s) 1155, 1213
BseLI CCNNNNNNNGG 2 cut(s) 287, 947
BseMI GCAATG 1 cut(s) 1248
BseMII CTCAG 7 cut(s) 230, 303, 369, 584, 862, 970, 1296
BseNI ACTGG 3 cut(s) 643, 825, 1059
BseRI GAGGAG 2 cut(s) 91, 853
BseXI GCAGC 7 cut(s) 80, 375, 1330, 1333, 1336, 1339, 1389
BshFI GGCC 4 cut(s) 523, 567, 734, 803
BshNI GGYRCC 1 cut(s) 1121
BsiSI CCGG 1 cut(s) 1119
BslI CCNNNNNNNGG 2 cut(s) 287, 947
BsmAI GTCTC 4 cut(s) 901, 935, 959, 1382
BsnI GGCC 4 cut(s) 523, 567, 734, 803
Bso31I GGTCTC 2 cut(s) 959, 1382
Bsp119I TTCGAA 1 cut(s) 1107
Bsp1286I GDGCHC 2 cut(s) 170, 356
Bsp143I GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
BspACI CCGC 1 cut(s) 1064
BspANI GGCC 4 cut(s) 523, 567, 734, 803
BspCNI CTCAG 7 cut(s) 229, 304, 368, 583, 861, 969, 1295
BspHI TCATGA 1 cut(s) 373
BspLI GGNNCC 4 cut(s) 581, 651, 1123, 1429
BspMAI CTGCAG 2 cut(s) 529, 1357
BspMI ACCTGC 1 cut(s) 1218
BspPI GGATC 2 cut(s) 665, 875
BspQI GCTCTTC 1 cut(s) 661
BspT104I TTCGAA 1 cut(s) 1107
BspT107I GGYRCC 1 cut(s) 1121
BspTNI GGTCTC 2 cut(s) 959, 1382
BsrDI GCAATG 1 cut(s) 1248
BsrI ACTGG 3 cut(s) 643, 825, 1059
BssECI CCNNGG 2 cut(s) 653, 1117
BssMI GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
BssT1I CCWWGG 1 cut(s) 653
Bst2UI CCWGG 2 cut(s) 756, 805
Bst4CI ACNGT 3 cut(s) 347, 859, 1277
Bst6I CTCTTC 2 cut(s) 127, 661
BstBI TTCGAA 1 cut(s) 1107
BstC8I GCNNGC 3 cut(s) 525, 705, 1324
BstDEI CTNAG 9 cut(s) 179, 216, 312, 355, 570, 629, 848, 956, 1282
BstF5I GGATG 2 cut(s) 1155, 1213
BstKTI GATC 6 cut(s) 373, 412, 611, 660, 883, 1169
BstMAI GTCTC 4 cut(s) 901, 935, 959, 1382
BstMBI GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
BstMWI GCNNNNNNNGC 6 cut(s) 360, 520, 740, 1041, 1349, 1352
BstNI CCWGG 2 cut(s) 756, 805
BstNSI RCATGY 1 cut(s) 794
BstSCI CCNGG 3 cut(s) 754, 803, 1117
BstSFI CTRYAG 3 cut(s) 525, 622, 1353
BstV1I GCAGC 7 cut(s) 80, 375, 1330, 1333, 1336, 1339, 1389
BstX2I RGATCY 2 cut(s) 880, 1166
BstYI RGATCY 2 cut(s) 880, 1166
BsuRI GGCC 4 cut(s) 523, 567, 734, 803
BtrI CACGTC 1 cut(s) 1310
BtsCI GGATG 2 cut(s) 1155, 1213
BtsI GCAGTG 1 cut(s) 373
BtsIMutI CAGTG 4 cut(s) 330, 373, 832, 1066
BveI ACCTGC 1 cut(s) 1218
Cac8I GCNNGC 3 cut(s) 525, 705, 1324
CaiI CAGNNNCTG 1 cut(s) 1346
CciI TCATGA 1 cut(s) 373
Cfr13I GGNCC 3 cut(s) 566, 649, 732
Csp6I GTAC 4 cut(s) 442, 811, 906, 1122
CviAII CATG 9 cut(s) 43, 374, 434, 736, 791, 1054, 1234, 1385, 1434
CviQI GTAC 4 cut(s) 442, 811, 906, 1122
DdeI CTNAG 9 cut(s) 179, 216, 312, 355, 570, 629, 848, 956, 1282
DpnI GATC 6 cut(s) 372, 411, 610, 659, 882, 1168
DpnII GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
EaeI YGGCCR 1 cut(s) 801
Eam1104I CTCTTC 2 cut(s) 127, 661
EarI CTCTTC 2 cut(s) 127, 661
Eco130I CCWWGG 1 cut(s) 653
Eco147I AGGCCT 1 cut(s) 523
Eco24I GRGCYC 2 cut(s) 170, 356
Eco31I GGTCTC 2 cut(s) 959, 1382
Eco47I GGWCC 1 cut(s) 649
Eco57I CTGAAG 3 cut(s) 73, 267, 699
EcoRI GAATTC 1 cut(s) 1109
EcoRII CCWGG 2 cut(s) 754, 803
EcoT14I CCWWGG 1 cut(s) 653
EcoT38I GRGCYC 2 cut(s) 170, 356
ErhI CCWWGG 1 cut(s) 653
FaeI CATG 9 cut(s) 46, 377, 437, 739, 794, 1057, 1237, 1388, 1437
FatI CATG 9 cut(s) 42, 373, 433, 735, 790, 1053, 1233, 1384, 1433
FauNDI CATATG 1 cut(s) 985
FbaI TGATCA 2 cut(s) 370, 409
FblI GTMKAC 1 cut(s) 625
Fnu4HI GCNGC 7 cut(s) 94, 364, 1344, 1347, 1350, 1353, 1378
FokI GGATG 2 cut(s) 1162, 1200
FriOI GRGCYC 2 cut(s) 170, 356
Fsp4HI GCNGC 7 cut(s) 94, 364, 1344, 1347, 1350, 1353, 1378
FspBI CTAG 1 cut(s) 744
GluI GCNGC 7 cut(s) 94, 364, 1344, 1347, 1350, 1353, 1378
HaeIII GGCC 4 cut(s) 523, 567, 734, 803
HapII CCGG 1 cut(s) 1119
Hin1II CATG 9 cut(s) 46, 377, 437, 739, 794, 1057, 1237, 1388, 1437
HincII GTYRAC 2 cut(s) 6, 1024
HindII GTYRAC 2 cut(s) 6, 1024
HindIII AAGCTT 2 cut(s) 239, 886
HinfI GANTC 2 cut(s) 533, 1286
HpaI GTTAAC 1 cut(s) 6
HpaII CCGG 1 cut(s) 1119
HphI GGTGA 8 cut(s) 353, 472, 1038, 1153, 1165, 1211, 1296, 1326
Hpy166II GTNNAC 4 cut(s) 6, 626, 862, 1024
Hpy188I TCNGA 7 cut(s) 247, 313, 358, 396, 414, 573, 1285
Hpy188III TCNNGA 3 cut(s) 218, 374, 778
Hpy8I GTNNAC 4 cut(s) 6, 626, 862, 1024
HpyAV CCTTC 7 cut(s) 32, 97, 466, 596, 1109, 1277, 1403
HpyCH4III ACNGT 3 cut(s) 347, 859, 1277
HpyCH4IV ACGT 1 cut(s) 1309
HpyCH4V TGCA 7 cut(s) 158, 297, 527, 703, 1213, 1246, 1355
HpyF10VI GCNNNNNNNGC 6 cut(s) 360, 520, 740, 1041, 1349, 1352
HpyF3I CTNAG 9 cut(s) 179, 216, 312, 355, 570, 629, 848, 956, 1282
HpySE526I ACGT 1 cut(s) 1309
Hsp92II CATG 9 cut(s) 46, 377, 437, 739, 794, 1057, 1237, 1388, 1437
KpnI GGTACC 1 cut(s) 1125
Ksp22I TGATCA 2 cut(s) 370, 409
KspAI GTTAAC 1 cut(s) 6
Kzo9I GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
LguI GCTCTTC 1 cut(s) 661
LmnI GCTCC 2 cut(s) 112, 1427
Lsp1109I GCAGC 7 cut(s) 80, 375, 1330, 1333, 1336, 1339, 1389
LweI GCATC 2 cut(s) 1222, 1310
MaeI CTAG 1 cut(s) 744
MaeII ACGT 1 cut(s) 1309
MaeIII GTNAC 5 cut(s) 20, 67, 341, 1205, 1277
MalI GATC 6 cut(s) 372, 411, 610, 659, 882, 1168
MboI GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
MflI RGATCY 2 cut(s) 880, 1166
MhlI GDGCHC 2 cut(s) 170, 356
MlsI TGGCCA 1 cut(s) 803
MluCI AATT 2 cut(s) 574, 1109
MluNI TGGCCA 1 cut(s) 803
MmeI TCCRAC 3 cut(s) 210, 579, 627
Mox20I TGGCCA 1 cut(s) 803
MscI TGGCCA 1 cut(s) 803
MseI TTAA 2 cut(s) 5, 639
MslI CAYNNNNRTG 2 cut(s) 378, 789
Msp20I TGGCCA 1 cut(s) 803
MspA1I CMGCKG 2 cut(s) 93, 1343
MspI CCGG 1 cut(s) 1119
MspR9I CCNGG 3 cut(s) 756, 805, 1119
MvaI CCWGG 2 cut(s) 756, 805
MwoI GCNNNNNNNGC 6 cut(s) 360, 520, 740, 1041, 1349, 1352
NciI CCSGG 1 cut(s) 1119
NdeI CATATG 1 cut(s) 985
NdeII GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
NlaIII CATG 9 cut(s) 46, 377, 437, 739, 794, 1057, 1237, 1388, 1437
NlaIV GGNNCC 4 cut(s) 581, 651, 1123, 1429
NmuCI GTSAC 2 cut(s) 20, 341
NspI RCATGY 1 cut(s) 794
NspV TTCGAA 1 cut(s) 1107
PagI TCATGA 1 cut(s) 373
PceI AGGCCT 1 cut(s) 523
PciSI GCTCTTC 1 cut(s) 661
PfeI GAWTC 2 cut(s) 533, 1286
PfoI TCCNGGA 1 cut(s) 754
PkrI GCNGC 7 cut(s) 95, 365, 1345, 1348, 1351, 1354, 1379
PsiI TTATAA 1 cut(s) 797
Psp6I CCWGG 2 cut(s) 754, 803
PspGI CCWGG 2 cut(s) 754, 803
PspN4I GGNNCC 4 cut(s) 581, 651, 1123, 1429
PspPI GGNCC 3 cut(s) 566, 649, 732
PstI CTGCAG 2 cut(s) 529, 1357
PstNI CAGNNNCTG 1 cut(s) 1346
PsuI RGATCY 2 cut(s) 880, 1166
PvuII CAGCTG 2 cut(s) 93, 1343
RsaI GTAC 4 cut(s) 443, 812, 907, 1123
RsaNI GTAC 4 cut(s) 442, 811, 906, 1122
RseI CAYNNNNRTG 2 cut(s) 378, 789
SapI GCTCTTC 1 cut(s) 661
SaqAI TTAA 2 cut(s) 5, 639
SatI GCNGC 7 cut(s) 94, 364, 1344, 1347, 1350, 1353, 1378
Sau3AI GATC 6 cut(s) 370, 409, 608, 657, 880, 1166
Sau96I GGNCC 3 cut(s) 566, 649, 732
ScrFI CCNGG 3 cut(s) 756, 805, 1119
SduI GDGCHC 2 cut(s) 170, 356
SfaNI GCATC 2 cut(s) 1222, 1310
SfcI CTRYAG 3 cut(s) 525, 622, 1353
SfuI TTCGAA 1 cut(s) 1107
SinI GGWCC 1 cut(s) 649
SmiMI CAYNNNNRTG 2 cut(s) 378, 789
SmlI CTYRAG 2 cut(s) 542, 898
SmoI CTYRAG 2 cut(s) 542, 898
Sse9I AATT 2 cut(s) 574, 1109
SseBI AGGCCT 1 cut(s) 523
SsiI CCGC 1 cut(s) 1064
SspMI CTAG 1 cut(s) 744
StuI AGGCCT 1 cut(s) 523
StyD4I CCNGG 3 cut(s) 754, 803, 1117
StyI CCWWGG 1 cut(s) 653
TaaI ACNGT 3 cut(s) 347, 859, 1277
TaiI ACGT 1 cut(s) 1312
TaqI TCGA 1 cut(s) 1107
TasI AATT 2 cut(s) 574, 1109
TatI WGTACW 2 cut(s) 810, 905
TfiI GAWTC 2 cut(s) 533, 1286
Tru1I TTAA 2 cut(s) 5, 639
Tru9I TTAA 2 cut(s) 5, 639
TscAI CASTG 4 cut(s) 337, 373, 832, 1066
TseFI GTSAC 2 cut(s) 20, 341
TseI GCWGC 7 cut(s) 93, 363, 1343, 1346, 1349, 1352, 1377
Tsp45I GTSAC 2 cut(s) 20, 341
TspDTI ATGAA 5 cut(s) 51, 192, 419, 1278, 1396
TspRI CASTG 4 cut(s) 337, 373, 832, 1066
VpaK11BI GGWCC 1 cut(s) 649
XapI RAATTY 1 cut(s) 1109
XceI RCATGY 1 cut(s) 794
XmiI GTMKAC 1 cut(s) 625
XspI CTAG 1 cut(s) 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.