Prupe.1G285800_v2.0.a1

Belongs to the 14-3-3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0016506
Physical Location & Seq
Forward (+)
28660964 .. 28663783
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G285800.1

Sequence Viewer

Length: 792 bp
ATGTCGTCCCCCGAGAAGGAGAGAGAGACCCAGGTTTACATGGCCAAGCTCGCCGAGCAGGCCGAGCGTTACGAAGAAATGGTTGAATGTATGAAGAAAGTTGCAAAACTGGACCTTGAGCTGACCGTGGAGGAGAGGAATCTTCTTTCTGTGGGATACAAAAATGTCATAGGTGCTCGACGGGCCTCTTGGCGAATCATGTCTTCCATTGAGCAGAAGGAAGAGTCTAAGGGGAATGAGCACAATGTCAAACTGATCAAGGGTTACCGCCAGAAGGTGGAGGAGGAACTCTCCAAGATTTGCAATGACATTCTGTCTATCATAGACAAGCACCTGATCCCCTCTTCTACATCTGGAGAGGCCACTGTTTTCTACTACAAAATGAAAGGTGACTATTACCGGTACCTTGCTGAGTTCAAGACCGACCAGGACAGAAAAGAGGCAGCTGAGCAGTCACTCAAGGGATACGAGGCCGCTTCAGCCACTGCAAACACAGATCTGCCATCAACCCACCCGATCCGTCTTGGTCTAGCCCTCAACTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCTGAGAGGGCTTGCCATTTGGCTAAACAAGCATTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAGGAGTCATACAAGGACAGCACCCTTATTATGCAATTGTTGAGAGACAACCTCACTCTCTGGACCTCTGATTTGCCTGAAGATGGAGGTGACGACAATTTCAAAGGTGAAGAAACCAAACCAGCAGAACCTGCAACTGCGGCGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203
Pfam Domains
Protein Families
14-3-3

Protein Analysis

264

Amino Acids

29.9

Weight (kDa)

4.91

Isoelectric Point (pI)

51.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016506)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26480
fragaria_vesca FvH4_4g30210
malus_domestica MD13G1063600.v1.1 MD16G1062100.v1.1
prunus_persica Prupe.1G285800_v2.0.a1
pyrus_communis pycom13g05620
rosa_chinensis RchiOBHm_Chr4g0438531
rosa_laevigata RLG00000006354
rosa_multiflora Rmu_sc0002327.1_g000007
rosa_roxburghii Rroxscaffold_5G00379530
rosa_rugosa Rorug04G0311100
rosa_samantha Rh4DG367600
rosa_wichuraiana Rw0G006620 Rw0G016570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 781
Acc65I GGTACC 1 cut(s) 402
AccB1I GGYRCC 1 cut(s) 402
AccB7I CCANNNNNTGG 1 cut(s) 277
AciI CCGC 3 cut(s) 268, 474, 782
AclWI GGATC 2 cut(s) 331, 511
AcoI YGGCCR 1 cut(s) 42
AcsI RAATTY 1 cut(s) 568
AcuI CTGAAG 2 cut(s) 462, 741
AfaI GTAC 1 cut(s) 404
AfiI CCNNNNNNNGG 4 cut(s) 16, 274, 277, 725
AgeI ACCGGT 1 cut(s) 399
AgsI TTSAA 3 cut(s) 86, 418, 745
AhdI GACNNNNNGTC 1 cut(s) 313
AjnI CCWGG 2 cut(s) 30, 426
AluBI AGCT 3 cut(s) 49, 121, 446
AluI AGCT 3 cut(s) 49, 121, 446
Alw21I GWGCWC 2 cut(s) 178, 243
Alw26I GTCTC 2 cut(s) 20, 681
AlwI GGATC 2 cut(s) 331, 511
AlwNI CAGNNNCTG 2 cut(s) 485, 773
Ama87I CYCGRG 1 cut(s) 11
AoxI GGCC 5 cut(s) 42, 60, 183, 360, 471
ApeKI GCWGC 1 cut(s) 443
ApoI RAATTY 1 cut(s) 568
ArsI GACNNNNNNTTYG 2 cut(s) 697, 729
AsiGI ACCGGT 1 cut(s) 399
Asp718I GGTACC 1 cut(s) 402
AspS9I GGNCC 3 cut(s) 112, 183, 705
AsuHPI GGTGA 3 cut(s) 401, 743, 761
AvaI CYCGRG 1 cut(s) 11
AvaII GGWCC 2 cut(s) 112, 705
BalI TGGCCA 1 cut(s) 44
BanI GGYRCC 1 cut(s) 402
BbsI GAAGAC 2 cut(s) 195, 541
Bbv12I GWGCWC 2 cut(s) 178, 243
BbvI GCAGC 1 cut(s) 455
BccI CCATC 2 cut(s) 511, 719
BciT130I CCWGG 2 cut(s) 32, 428
BciVI GTATCC 2 cut(s) 149, 458
BclI TGATCA 1 cut(s) 255
BcoDI GTCTC 2 cut(s) 20, 681
BfaI CTAG 1 cut(s) 530
BfuAI ACCTGC 1 cut(s) 781
BfuI GTATCC 2 cut(s) 149, 458
BglI GCCNNNNNGGC 1 cut(s) 59
BglII AGATCT 1 cut(s) 496
BisI GCNGC 3 cut(s) 444, 474, 783
BlpI GCTNAGC 1 cut(s) 447
BlsI GCNGC 3 cut(s) 445, 475, 784
Bme1390I CCNGG 2 cut(s) 32, 428
Bme18I GGWCC 2 cut(s) 112, 705
BmeRI GACNNNNNGTC 1 cut(s) 313
BmeT110I CYCGRG 1 cut(s) 11
BmgT120I GGNCC 3 cut(s) 112, 183, 705
BmiI GGNNCC 1 cut(s) 404
BmrFI CCNGG 2 cut(s) 32, 428
BpiI GAAGAC 2 cut(s) 195, 541
BplI GAGNNNNNCTC 4 cut(s) 275, 307, 678, 710
BpmI CTGGAG 1 cut(s) 375
Bpu1102I GCTNAGC 1 cut(s) 447
BpuEI CTTGAG 3 cut(s) 137, 443, 658
BsaI GGTCTC 1 cut(s) 20
BsaJI CCNNGG 2 cut(s) 30, 126
BsaWI WCCGGW 1 cut(s) 399
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 274, 277, 725
Bse118I RCCGGY 1 cut(s) 399
Bse1I ACTGG 1 cut(s) 114
Bse3DI GCAATG 1 cut(s) 310
BseBI CCWGG 2 cut(s) 32, 428
BseDI CCNNGG 2 cut(s) 30, 126
BseLI CCNNNNNNNGG 4 cut(s) 16, 274, 277, 725
BseMI GCAATG 1 cut(s) 310
BseMII CTCAG 3 cut(s) 402, 438, 567
BseNI ACTGG 1 cut(s) 114
BseRI GAGGAG 3 cut(s) 146, 296, 659
BseXI GCAGC 1 cut(s) 455
BshFI GGCC 5 cut(s) 44, 62, 185, 362, 473
BshNI GGYRCC 1 cut(s) 402
BshTI ACCGGT 1 cut(s) 399
BsiHKAI GWGCWC 2 cut(s) 178, 243
BsiHKCI CYCGRG 1 cut(s) 11
BsiSI CCGG 1 cut(s) 400
BslI CCNNNNNNNGG 4 cut(s) 16, 274, 277, 725
BsmAI GTCTC 2 cut(s) 20, 681
BsnI GGCC 5 cut(s) 44, 62, 185, 362, 473
Bso31I GGTCTC 1 cut(s) 20
BsoBI CYCGRG 1 cut(s) 11
Bsp1286I GDGCHC 2 cut(s) 178, 243
Bsp143I GATC 4 cut(s) 255, 336, 496, 516
Bsp1720I GCTNAGC 1 cut(s) 447
BspACI CCGC 3 cut(s) 268, 474, 782
BspANI GGCC 5 cut(s) 44, 62, 185, 362, 473
BspCNI CTCAG 3 cut(s) 403, 439, 568
BspLI GGNNCC 1 cut(s) 404
BspMI ACCTGC 1 cut(s) 781
BspPI GGATC 2 cut(s) 331, 511
BspT107I GGYRCC 1 cut(s) 402
BspTNI GGTCTC 1 cut(s) 20
BsrDI GCAATG 1 cut(s) 310
BsrFI RCCGGY 1 cut(s) 399
BsrI ACTGG 1 cut(s) 114
BssAI RCCGGY 1 cut(s) 399
BssECI CCNNGG 2 cut(s) 30, 126
BssMI GATC 4 cut(s) 255, 336, 496, 516
Bst2UI CCWGG 2 cut(s) 32, 428
Bst4CI ACNGT 2 cut(s) 127, 367
Bst6I CTCTTC 2 cut(s) 216, 349
BstAPI GCANNNNNTGC 1 cut(s) 773
BstC8I GCNNGC 3 cut(s) 51, 60, 586
BstDEI CTNAG 4 cut(s) 228, 411, 447, 576
BstDSI CCRYGG 1 cut(s) 126
BstEII GGTNACC 1 cut(s) 263
BstKTI GATC 4 cut(s) 258, 339, 499, 519
BstMAI GTCTC 2 cut(s) 20, 681
BstMBI GATC 4 cut(s) 255, 336, 496, 516
BstMWI GCNNNNNNNGC 9 cut(s) 50, 55, 59, 64, 182, 479, 602, 773, 782
BstNI CCWGG 2 cut(s) 32, 428
BstPI GGTNACC 1 cut(s) 263
BstSCI CCNGG 2 cut(s) 30, 426
BstV1I GCAGC 1 cut(s) 455
BstV2I GAAGAC 2 cut(s) 195, 541
BstX2I RGATCY 1 cut(s) 496
BstYI RGATCY 1 cut(s) 496
BsuI GTATCC 2 cut(s) 149, 458
BsuRI GGCC 5 cut(s) 44, 62, 185, 362, 473
BtgI CCRYGG 1 cut(s) 126
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 2 cut(s) 363, 483
BveI ACCTGC 1 cut(s) 781
Cac8I GCNNGC 3 cut(s) 51, 60, 586
CaiI CAGNNNCTG 2 cut(s) 485, 773
Cfr10I RCCGGY 1 cut(s) 399
Cfr13I GGNCC 3 cut(s) 112, 183, 705
Csp6I GTAC 1 cut(s) 403
CspAI ACCGGT 1 cut(s) 399
CviAII CATG 2 cut(s) 40, 199
CviQI GTAC 1 cut(s) 403
DdeI CTNAG 4 cut(s) 228, 411, 447, 576
DpnI GATC 4 cut(s) 257, 338, 498, 518
DpnII GATC 4 cut(s) 255, 336, 496, 516
DriI GACNNNNNGTC 1 cut(s) 313
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 216, 349
Eam1105I GACNNNNNGTC 1 cut(s) 313
EarI CTCTTC 2 cut(s) 216, 349
Eco31I GGTCTC 1 cut(s) 20
Eco47I GGWCC 2 cut(s) 112, 705
Eco57I CTGAAG 2 cut(s) 462, 741
Eco88I CYCGRG 1 cut(s) 11
Eco91I GGTNACC 1 cut(s) 263
EcoO65I GGTNACC 1 cut(s) 263
EcoRI GAATTC 1 cut(s) 568
EcoRII CCWGG 2 cut(s) 30, 426
FaeI CATG 2 cut(s) 43, 202
FaiI YATR 9 cut(s) 41, 92, 170, 200, 323, 558, 566, 652, 674
FatI CATG 2 cut(s) 39, 198
FbaI TGATCA 1 cut(s) 255
Fnu4HI GCNGC 3 cut(s) 444, 474, 783
Fsp4HI GCNGC 3 cut(s) 444, 474, 783
FspBI CTAG 1 cut(s) 530
GluI GCNGC 3 cut(s) 444, 474, 783
GsuI CTGGAG 1 cut(s) 375
HaeIII GGCC 5 cut(s) 44, 62, 185, 362, 473
HapII CCGG 1 cut(s) 400
Hin1II CATG 2 cut(s) 43, 202
HinfI GANTC 4 cut(s) 139, 195, 224, 647
HpaII CCGG 1 cut(s) 400
HphI GGTGA 3 cut(s) 401, 743, 761
Hpy166II GTNNAC 1 cut(s) 37
Hpy188I TCNGA 1 cut(s) 712
Hpy188III TCNNGA 4 cut(s) 354, 418, 575, 703
Hpy8I GTNNAC 1 cut(s) 37
Hpy99I CGWCG 1 cut(s) 183
HpyAV CCTTC 3 cut(s) 10, 211, 268
HpyCH4III ACNGT 2 cut(s) 127, 367
HpyCH4V TGCA 6 cut(s) 104, 303, 488, 623, 676, 776
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 55, 59, 64, 182, 479, 602, 773, 782
HpyF3I CTNAG 4 cut(s) 228, 411, 447, 576
Hsp92II CATG 2 cut(s) 43, 202
KpnI GGTACC 1 cut(s) 406
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 4 cut(s) 255, 336, 496, 516
Lsp1109I GCAGC 1 cut(s) 455
MaeI CTAG 1 cut(s) 530
MaeIII GTNAC 5 cut(s) 68, 263, 389, 453, 731
MalI GATC 4 cut(s) 257, 338, 498, 518
MboI GATC 4 cut(s) 255, 336, 496, 516
MboII GAAGA 9 cut(s) 86, 106, 134, 195, 233, 336, 541, 734, 764
MfeI CAATTG 2 cut(s) 618, 677
MflI RGATCY 1 cut(s) 496
MhlI GDGCHC 2 cut(s) 178, 243
MlsI TGGCCA 1 cut(s) 44
MluCI AATT 4 cut(s) 568, 618, 677, 739
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 2 cut(s) 233, 656
MmeI TCCRAC 1 cut(s) 609
Mox20I TGGCCA 1 cut(s) 44
MscI TGGCCA 1 cut(s) 44
Msp20I TGGCCA 1 cut(s) 44
MspA1I CMGCKG 1 cut(s) 446
MspI CCGG 1 cut(s) 400
MspR9I CCNGG 2 cut(s) 32, 428
MunI CAATTG 2 cut(s) 618, 677
MvaI CCWGG 2 cut(s) 32, 428
MwoI GCNNNNNNNGC 9 cut(s) 50, 55, 59, 64, 182, 479, 602, 773, 782
NdeII GATC 4 cut(s) 255, 336, 496, 516
NlaIII CATG 2 cut(s) 43, 202
NlaIV GGNNCC 1 cut(s) 404
NmeAIII GCCGAG 2 cut(s) 79, 88
NmuCI GTSAC 3 cut(s) 389, 453, 731
PfeI GAWTC 2 cut(s) 139, 195
PflMI CCANNNNNTGG 1 cut(s) 277
PinAI ACCGGT 1 cut(s) 399
PkrI GCNGC 3 cut(s) 445, 475, 784
PleI GAGTC 2 cut(s) 232, 655
PpsI GAGTC 2 cut(s) 232, 655
Psp6I CCWGG 2 cut(s) 30, 426
PspEI GGTNACC 1 cut(s) 263
PspGI CCWGG 2 cut(s) 30, 426
PspN4I GGNNCC 1 cut(s) 404
PspPI GGNCC 3 cut(s) 112, 183, 705
PstNI CAGNNNCTG 2 cut(s) 485, 773
PsuI RGATCY 1 cut(s) 496
PvuII CAGCTG 1 cut(s) 446
RsaI GTAC 1 cut(s) 404
RsaNI GTAC 1 cut(s) 403
SatI GCNGC 3 cut(s) 444, 474, 783
Sau3AI GATC 4 cut(s) 255, 336, 496, 516
Sau96I GGNCC 3 cut(s) 112, 183, 705
SchI GAGTC 2 cut(s) 233, 656
ScrFI CCNGG 2 cut(s) 32, 428
SduI GDGCHC 2 cut(s) 178, 243
SinI GGWCC 2 cut(s) 112, 705
SmlI CTYRAG 3 cut(s) 116, 458, 637
SmoI CTYRAG 3 cut(s) 116, 458, 637
Sse9I AATT 4 cut(s) 568, 618, 677, 739
SsiI CCGC 3 cut(s) 268, 474, 782
SspMI CTAG 1 cut(s) 530
StyD4I CCNGG 2 cut(s) 30, 426
TaaI ACNGT 2 cut(s) 127, 367
TaqI TCGA 1 cut(s) 178
TaqII GACCGA 1 cut(s) 437
TasI AATT 4 cut(s) 568, 618, 677, 739
TauI GCSGC 2 cut(s) 476, 785
TfiI GAWTC 2 cut(s) 139, 195
TscAI CASTG 2 cut(s) 370, 490
TseFI GTSAC 3 cut(s) 389, 453, 731
TseI GCWGC 1 cut(s) 443
Tsp45I GTSAC 3 cut(s) 389, 453, 731
TspDTI ATGAA 3 cut(s) 107, 398, 581
TspGWI ACGGA 1 cut(s) 509
TspRI CASTG 2 cut(s) 370, 490
Van91I CCANNNNNTGG 1 cut(s) 277
VpaK11BI GGWCC 2 cut(s) 112, 705
XapI RAATTY 1 cut(s) 568
XspI CTAG 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.