Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68350 |
| fragaria_vesca | FvH4_4g27040 |
| malus_domestica | MD13G1039400.v1.1 MD16G1040300.v1.1 |
| prunus_persica | Prupe.1G313800_v2.0.a1 |
| pyrus_communis | pycom13g03390 |
| rosa_chinensis | RchiOBHm_Chr4g0434841 |
| rosa_laevigata | RLG00000006642 |
| rosa_multiflora | Rmu_sc0003726.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00376050 |
| rosa_rugosa | Rorug04G0279300 |
| rosa_samantha | Rh4AG335400 Rh4BG343900 Rh4CG358300 Rh4DG337800 |
| rosa_wichuraiana | Rw4G029250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 435 |
| AciI | CCGC | 1 cut(s) | 430 |
| AclWI | GGATC | 1 cut(s) | 59 |
| AcuI | CTGAAG | 1 cut(s) | 164 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 356 |
| AgsI | TTSAA | 4 cut(s) | 92, 136, 305, 420 |
| AluBI | AGCT | 5 cut(s) | 43, 139, 226, 237, 294 |
| AluI | AGCT | 5 cut(s) | 43, 139, 226, 237, 294 |
| Alw26I | GTCTC | 1 cut(s) | 40 |
| AlwI | GGATC | 1 cut(s) | 59 |
| ApeKI | GCWGC | 2 cut(s) | 223, 237 |
| AxyI | CCTNAGG | 1 cut(s) | 47 |
| BanII | GRGCYC | 1 cut(s) | 436 |
| BbvI | GCAGC | 2 cut(s) | 224, 235 |
| BceAI | ACGGC | 1 cut(s) | 376 |
| BcoDI | GTCTC | 1 cut(s) | 40 |
| BfaI | CTAG | 1 cut(s) | 291 |
| BfuAI | ACCTGC | 1 cut(s) | 435 |
| BisI | GCNGC | 2 cut(s) | 224, 238 |
| BlsI | GCNGC | 2 cut(s) | 225, 239 |
| BmiI | GGNNCC | 2 cut(s) | 164, 390 |
| BmrI | ACTGGG | 1 cut(s) | 409 |
| BmuI | ACTGGG | 1 cut(s) | 409 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 226, 258 |
| BpmI | CTGGAG | 1 cut(s) | 378 |
| BpuEI | CTTGAG | 2 cut(s) | 228, 316 |
| BsaBI | GATNNNNATC | 1 cut(s) | 56 |
| BsaI | GGTCTC | 1 cut(s) | 40 |
| BsaJI | CCNNGG | 1 cut(s) | 166 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 356 |
| Bse1I | ACTGG | 3 cut(s) | 178, 361, 404 |
| Bse21I | CCTNAGG | 1 cut(s) | 47 |
| Bse3DI | GCAATG | 1 cut(s) | 63 |
| Bse8I | GATNNNNATC | 1 cut(s) | 56 |
| BseDI | CCNNGG | 1 cut(s) | 166 |
| BseJI | GATNNNNATC | 1 cut(s) | 56 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 356 |
| BseMI | GCAATG | 1 cut(s) | 63 |
| BseMII | CTCAG | 2 cut(s) | 118, 449 |
| BseNI | ACTGG | 3 cut(s) | 178, 361, 404 |
| BseXI | GCAGC | 2 cut(s) | 224, 235 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 356 |
| BsmAI | GTCTC | 1 cut(s) | 40 |
| BsmI | GAATGC | 1 cut(s) | 477 |
| Bso31I | GGTCTC | 1 cut(s) | 40 |
| Bsp1286I | GDGCHC | 1 cut(s) | 436 |
| Bsp143I | GATC | 1 cut(s) | 51 |
| BspACI | CCGC | 1 cut(s) | 430 |
| BspCNI | CTCAG | 2 cut(s) | 117, 448 |
| BspHI | TCATGA | 1 cut(s) | 228 |
| BspLI | GGNNCC | 2 cut(s) | 164, 390 |
| BspMI | ACCTGC | 1 cut(s) | 435 |
| BspPI | GGATC | 1 cut(s) | 59 |
| BspQI | GCTCTTC | 2 cut(s) | 227, 348 |
| BspTNI | GGTCTC | 1 cut(s) | 40 |
| BsrDI | GCAATG | 1 cut(s) | 63 |
| BsrI | ACTGG | 3 cut(s) | 178, 361, 404 |
| BssECI | CCNNGG | 1 cut(s) | 166 |
| BssMI | GATC | 1 cut(s) | 51 |
| Bst6I | CTCTTC | 2 cut(s) | 227, 348 |
| BstC8I | GCNNGC | 1 cut(s) | 432 |
| BstDEI | CTNAG | 3 cut(s) | 47, 104, 435 |
| BstDSI | CCRYGG | 1 cut(s) | 166 |
| BstKTI | GATC | 1 cut(s) | 54 |
| BstMAI | GTCTC | 1 cut(s) | 40 |
| BstMBI | GATC | 1 cut(s) | 51 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 145 |
| BstV1I | GCAGC | 2 cut(s) | 224, 235 |
| BstX2I | RGATCY | 1 cut(s) | 51 |
| BstYI | RGATCY | 1 cut(s) | 51 |
| Bsu36I | CCTNAGG | 1 cut(s) | 47 |
| BtgI | CCRYGG | 1 cut(s) | 166 |
| BtsI | GCAGTG | 1 cut(s) | 381 |
| BtsIMutI | CAGTG | 2 cut(s) | 354, 381 |
| BveI | ACCTGC | 1 cut(s) | 435 |
| Cac8I | GCNNGC | 1 cut(s) | 432 |
| CciI | TCATGA | 1 cut(s) | 228 |
| CviAII | CATG | 1 cut(s) | 229 |
| CviJI | RGCY | 9 cut(s) | 43, 139, 226, 237, 294, 341, 380, 391, 434 |
| CviKI_1 | RGCY | 9 cut(s) | 43, 139, 226, 237, 294, 341, 380, 391, 434 |
| DdeI | CTNAG | 3 cut(s) | 47, 104, 435 |
| DpnI | GATC | 1 cut(s) | 53 |
| DpnII | GATC | 1 cut(s) | 51 |
| Eam1104I | CTCTTC | 2 cut(s) | 227, 348 |
| EarI | CTCTTC | 2 cut(s) | 227, 348 |
| Eco24I | GRGCYC | 1 cut(s) | 436 |
| Eco31I | GGTCTC | 1 cut(s) | 40 |
| Eco57I | CTGAAG | 1 cut(s) | 164 |
| Eco81I | CCTNAGG | 1 cut(s) | 47 |
| EcoT38I | GRGCYC | 1 cut(s) | 436 |
| FaeI | CATG | 1 cut(s) | 232 |
| FaiI | YATR | 7 cut(s) | 230, 251, 253, 317, 319, 335, 459 |
| FatI | CATG | 1 cut(s) | 228 |
| FauI | CCCGC | 1 cut(s) | 423 |
| Fnu4HI | GCNGC | 2 cut(s) | 224, 238 |
| FriOI | GRGCYC | 1 cut(s) | 436 |
| Fsp4HI | GCNGC | 2 cut(s) | 224, 238 |
| FspBI | CTAG | 1 cut(s) | 291 |
| GluI | GCNGC | 2 cut(s) | 224, 238 |
| GsuI | CTGGAG | 1 cut(s) | 378 |
| Hin1II | CATG | 1 cut(s) | 232 |
| HindIII | AAGCTT | 1 cut(s) | 137 |
| HinfI | GANTC | 1 cut(s) | 485 |
| Hpy188I | TCNGA | 2 cut(s) | 144, 438 |
| Hpy188III | TCNNGA | 3 cut(s) | 106, 229, 245 |
| HpyAV | CCTTC | 3 cut(s) | 198, 299, 407 |
| HpyCH4V | TGCA | 3 cut(s) | 276, 374, 475 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 145 |
| HpyF3I | CTNAG | 3 cut(s) | 47, 104, 435 |
| Hsp92II | CATG | 1 cut(s) | 232 |
| Kzo9I | GATC | 1 cut(s) | 51 |
| LguI | GCTCTTC | 2 cut(s) | 227, 348 |
| LmnI | GCTCC | 2 cut(s) | 48, 388 |
| LpnPI | CCDG | 8 cut(s) | 91, 191, 342, 363, 385, 436, 440, 467 |
| Lsp1109I | GCAGC | 2 cut(s) | 224, 235 |
| MaeI | CTAG | 1 cut(s) | 291 |
| MalI | GATC | 1 cut(s) | 53 |
| MboI | GATC | 1 cut(s) | 51 |
| MboII | GAAGA | 7 cut(s) | 46, 52, 244, 323, 335, 374, 473 |
| MfeI | CAATTG | 1 cut(s) | 420 |
| MflI | RGATCY | 1 cut(s) | 51 |
| MhlI | GDGCHC | 1 cut(s) | 436 |
| MluCI | AATT | 3 cut(s) | 80, 113, 420 |
| MmeI | TCCRAC | 1 cut(s) | 375 |
| MnlI | CCTC | 7 cut(s) | 102, 133, 212, 252, 331, 357, 471 |
| MunI | CAATTG | 1 cut(s) | 420 |
| Mva1269I | GAATGC | 1 cut(s) | 477 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 145 |
| NdeII | GATC | 1 cut(s) | 51 |
| NlaIII | CATG | 1 cut(s) | 232 |
| NlaIV | GGNNCC | 2 cut(s) | 164, 390 |
| PagI | TCATGA | 1 cut(s) | 228 |
| PciSI | GCTCTTC | 2 cut(s) | 227, 348 |
| PctI | GAATGC | 1 cut(s) | 477 |
| PfeI | GAWTC | 1 cut(s) | 485 |
| PkrI | GCNGC | 2 cut(s) | 225, 239 |
| PspN4I | GGNNCC | 2 cut(s) | 164, 390 |
| PsuI | RGATCY | 1 cut(s) | 51 |
| SapI | GCTCTTC | 2 cut(s) | 227, 348 |
| SatI | GCNGC | 2 cut(s) | 224, 238 |
| Sau3AI | GATC | 1 cut(s) | 51 |
| SduI | GDGCHC | 1 cut(s) | 436 |
| SmlI | CTYRAG | 2 cut(s) | 243, 295 |
| SmoI | CTYRAG | 2 cut(s) | 243, 295 |
| Sse9I | AATT | 3 cut(s) | 80, 113, 420 |
| SsiI | CCGC | 1 cut(s) | 430 |
| SspMI | CTAG | 1 cut(s) | 291 |
| TasI | AATT | 3 cut(s) | 80, 113, 420 |
| TfiI | GAWTC | 1 cut(s) | 485 |
| TscAI | CASTG | 2 cut(s) | 361, 381 |
| TseI | GCWGC | 2 cut(s) | 223, 237 |
| TspDTI | ATGAA | 7 cut(s) | 46, 52, 197, 245, 319, 433, 474 |
| TspGWI | ACGGA | 1 cut(s) | 155 |
| TspRI | CASTG | 2 cut(s) | 361, 381 |
| XspI | CTAG | 1 cut(s) | 291 |