Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G71015 AT1G71015 AT2G01340 |
| fragaria_vesca | FvH4_4g32310 |
| malus_domestica | MD16G1029200.v1.1 |
| prunus_persica | Prupe.1G323600_v2.0.a1 |
| pyrus_communis | pycom13g02480 pycom16g02510 |
| rosa_chinensis | RchiOBHm_Chr4g0441101 |
| rosa_laevigata | RLG00000006114 |
| rosa_multiflora | Rmu_sc0006317.1_g000016 Rmu_sc0030601.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00382070 |
| rosa_rugosa | Rorug04G0331100 |
| rosa_samantha | Rh4AG382700 Rh4BG396500 Rh4CG411600 Rh4DG389300 |
| rosa_wichuraiana | Rw4G033030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 341 |
| AccII | CGCG | 1 cut(s) | 652 |
| AciI | CCGC | 2 cut(s) | 416, 534 |
| AclWI | GGATC | 2 cut(s) | 516, 640 |
| AfaI | GTAC | 1 cut(s) | 447 |
| AfeI | AGCGCT | 1 cut(s) | 286 |
| AgsI | TTSAA | 2 cut(s) | 64, 586 |
| AjnI | CCWGG | 1 cut(s) | 109 |
| AluBI | AGCT | 6 cut(s) | 86, 220, 235, 371, 494, 704 |
| AluI | AGCT | 6 cut(s) | 86, 220, 235, 371, 494, 704 |
| Alw26I | GTCTC | 3 cut(s) | 50, 321, 471 |
| AlwI | GGATC | 2 cut(s) | 516, 640 |
| Ama87I | CYCGRG | 2 cut(s) | 299, 386 |
| Aor51HI | AGCGCT | 1 cut(s) | 286 |
| ApeKI | GCWGC | 3 cut(s) | 220, 362, 491 |
| AspLEI | GCGC | 2 cut(s) | 287, 614 |
| AsuHPI | GGTGA | 2 cut(s) | 49, 274 |
| AvaI | CYCGRG | 2 cut(s) | 299, 386 |
| BaeGI | GKGCMC | 1 cut(s) | 387 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 678, 710 |
| BbsI | GAAGAC | 2 cut(s) | 563, 628 |
| BbvI | GCAGC | 3 cut(s) | 207, 374, 503 |
| BccI | CCATC | 2 cut(s) | 404, 602 |
| BciT130I | CCWGG | 1 cut(s) | 111 |
| BcoDI | GTCTC | 3 cut(s) | 50, 321, 471 |
| BfaI | CTAG | 1 cut(s) | 170 |
| BfmI | CTRYAG | 1 cut(s) | 360 |
| BfoI | RGCGCY | 2 cut(s) | 288, 615 |
| BisI | GCNGC | 3 cut(s) | 221, 363, 492 |
| BlsI | GCNGC | 3 cut(s) | 222, 364, 493 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| BmeT110I | CYCGRG | 2 cut(s) | 299, 386 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BmsI | GCATC | 3 cut(s) | 30, 374, 651 |
| BpiI | GAAGAC | 2 cut(s) | 563, 628 |
| BpuEI | CTTGAG | 1 cut(s) | 209 |
| BsaJI | CCNNGG | 2 cut(s) | 109, 387 |
| Bse1I | ACTGG | 1 cut(s) | 77 |
| Bse3DI | GCAATG | 1 cut(s) | 574 |
| BseBI | CCWGG | 1 cut(s) | 111 |
| BseDI | CCNNGG | 2 cut(s) | 109, 387 |
| BseGI | GGATG | 2 cut(s) | 435, 613 |
| BseMI | GCAATG | 1 cut(s) | 574 |
| BseMII | CTCAG | 1 cut(s) | 509 |
| BseNI | ACTGG | 1 cut(s) | 77 |
| BseRI | GAGGAG | 3 cut(s) | 149, 404, 407 |
| BseSI | GKGCMC | 1 cut(s) | 387 |
| BseXI | GCAGC | 3 cut(s) | 207, 374, 503 |
| Bsh1236I | CGCG | 1 cut(s) | 652 |
| BsiHKCI | CYCGRG | 2 cut(s) | 299, 386 |
| BsmAI | GTCTC | 3 cut(s) | 50, 321, 471 |
| BsmBI | CGTCTC | 2 cut(s) | 50, 471 |
| BsoBI | CYCGRG | 2 cut(s) | 299, 386 |
| Bsp1286I | GDGCHC | 1 cut(s) | 387 |
| Bsp143I | GATC | 3 cut(s) | 508, 632, 647 |
| BspACI | CCGC | 2 cut(s) | 416, 534 |
| BspCNI | CTCAG | 1 cut(s) | 508 |
| BspFNI | CGCG | 1 cut(s) | 652 |
| BspHI | TCATGA | 1 cut(s) | 345 |
| BspMAI | CTGCAG | 1 cut(s) | 364 |
| BspPI | GGATC | 2 cut(s) | 516, 640 |
| BsrDI | GCAATG | 1 cut(s) | 574 |
| BsrI | ACTGG | 1 cut(s) | 77 |
| BssECI | CCNNGG | 2 cut(s) | 109, 387 |
| BssMI | GATC | 3 cut(s) | 508, 632, 647 |
| Bst2UI | CCWGG | 1 cut(s) | 111 |
| Bst4CI | ACNGT | 1 cut(s) | 11 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 88 |
| BstDEI | CTNAG | 1 cut(s) | 495 |
| BstF5I | GGATG | 2 cut(s) | 435, 613 |
| BstFNI | CGCG | 1 cut(s) | 652 |
| BstH2I | RGCGCY | 2 cut(s) | 288, 615 |
| BstHHI | GCGC | 2 cut(s) | 287, 614 |
| BstKTI | GATC | 3 cut(s) | 511, 635, 650 |
| BstMAI | GTCTC | 3 cut(s) | 50, 321, 471 |
| BstMBI | GATC | 3 cut(s) | 508, 632, 647 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 172, 368, 491 |
| BstNI | CCWGG | 1 cut(s) | 111 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BstSFI | CTRYAG | 1 cut(s) | 360 |
| BstSLI | GKGCMC | 1 cut(s) | 387 |
| BstUI | CGCG | 1 cut(s) | 652 |
| BstV1I | GCAGC | 3 cut(s) | 207, 374, 503 |
| BstV2I | GAAGAC | 2 cut(s) | 563, 628 |
| BstX2I | RGATCY | 1 cut(s) | 508 |
| BstYI | RGATCY | 1 cut(s) | 508 |
| BtsCI | GGATG | 2 cut(s) | 435, 613 |
| BtsIMutI | CAGTG | 1 cut(s) | 84 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 88 |
| CciI | TCATGA | 1 cut(s) | 345 |
| CfoI | GCGC | 2 cut(s) | 287, 614 |
| Csp6I | GTAC | 1 cut(s) | 446 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 517, 552 |
| CviAII | CATG | 5 cut(s) | 116, 280, 310, 346, 617 |
| CviQI | GTAC | 1 cut(s) | 446 |
| DdeI | CTNAG | 1 cut(s) | 495 |
| DpnI | GATC | 3 cut(s) | 510, 634, 649 |
| DpnII | GATC | 3 cut(s) | 508, 632, 647 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 341 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 341 |
| Eco47III | AGCGCT | 1 cut(s) | 286 |
| Eco88I | CYCGRG | 2 cut(s) | 299, 386 |
| EcoRII | CCWGG | 1 cut(s) | 109 |
| Esp3I | CGTCTC | 2 cut(s) | 50, 471 |
| FaeI | CATG | 5 cut(s) | 119, 283, 313, 349, 620 |
| FaiI | YATR | 6 cut(s) | 117, 178, 281, 311, 347, 618 |
| FatI | CATG | 5 cut(s) | 115, 279, 309, 345, 616 |
| Fnu4HI | GCNGC | 3 cut(s) | 221, 363, 492 |
| FokI | GGATG | 2 cut(s) | 442, 620 |
| Fsp4HI | GCNGC | 3 cut(s) | 221, 363, 492 |
| FspBI | CTAG | 1 cut(s) | 170 |
| GlaI | GCGC | 2 cut(s) | 286, 613 |
| GluI | GCNGC | 3 cut(s) | 221, 363, 492 |
| HaeII | RGCGCY | 2 cut(s) | 288, 615 |
| HhaI | GCGC | 2 cut(s) | 287, 614 |
| Hin1II | CATG | 5 cut(s) | 119, 283, 313, 349, 620 |
| Hin6I | GCGC | 2 cut(s) | 285, 612 |
| HinP1I | GCGC | 2 cut(s) | 285, 612 |
| HincII | GTYRAC | 1 cut(s) | 523 |
| HindII | GTYRAC | 1 cut(s) | 523 |
| HphI | GGTGA | 2 cut(s) | 49, 274 |
| Hpy166II | GTNNAC | 1 cut(s) | 523 |
| Hpy188I | TCNGA | 6 cut(s) | 133, 321, 334, 498, 647, 674 |
| Hpy188III | TCNNGA | 3 cut(s) | 170, 301, 346 |
| Hpy8I | GTNNAC | 1 cut(s) | 523 |
| HpyAV | CCTTC | 3 cut(s) | 252, 598, 680 |
| HpyCH4III | ACNGT | 1 cut(s) | 11 |
| HpyCH4IV | ACGT | 1 cut(s) | 59 |
| HpyCH4V | TGCA | 4 cut(s) | 32, 43, 82, 362 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 172, 368, 491 |
| HpyF3I | CTNAG | 1 cut(s) | 495 |
| HpySE526I | ACGT | 1 cut(s) | 59 |
| Hsp92II | CATG | 5 cut(s) | 119, 283, 313, 349, 620 |
| HspAI | GCGC | 2 cut(s) | 285, 612 |
| Kzo9I | GATC | 3 cut(s) | 508, 632, 647 |
| LpnPI | CCDG | 8 cut(s) | 72, 90, 96, 123, 255, 280, 602, 690 |
| Lsp1109I | GCAGC | 3 cut(s) | 207, 374, 503 |
| LweI | GCATC | 3 cut(s) | 30, 374, 651 |
| MaeI | CTAG | 1 cut(s) | 170 |
| MaeII | ACGT | 1 cut(s) | 59 |
| MalI | GATC | 3 cut(s) | 510, 634, 649 |
| MboI | GATC | 3 cut(s) | 508, 632, 647 |
| MboII | GAAGA | 2 cut(s) | 568, 633 |
| MflI | RGATCY | 1 cut(s) | 508 |
| MhlI | GDGCHC | 1 cut(s) | 387 |
| MluCI | AATT | 2 cut(s) | 45, 458 |
| MmeI | TCCRAC | 1 cut(s) | 697 |
| MseI | TTAA | 2 cut(s) | 68, 715 |
| MspA1I | CMGCKG | 1 cut(s) | 534 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MvaI | CCWGG | 1 cut(s) | 111 |
| MvnI | CGCG | 1 cut(s) | 652 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 172, 368, 491 |
| NdeII | GATC | 3 cut(s) | 508, 632, 647 |
| NlaIII | CATG | 5 cut(s) | 119, 283, 313, 349, 620 |
| PaeR7I | CTCGAG | 1 cut(s) | 299 |
| PagI | TCATGA | 1 cut(s) | 345 |
| PkrI | GCNGC | 3 cut(s) | 222, 364, 493 |
| Psp6I | CCWGG | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 109 |
| PstI | CTGCAG | 1 cut(s) | 364 |
| PsuI | RGATCY | 1 cut(s) | 508 |
| RsaI | GTAC | 1 cut(s) | 447 |
| RsaNI | GTAC | 1 cut(s) | 446 |
| SaqAI | TTAA | 2 cut(s) | 68, 715 |
| SatI | GCNGC | 3 cut(s) | 221, 363, 492 |
| Sau3AI | GATC | 3 cut(s) | 508, 632, 647 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SduI | GDGCHC | 1 cut(s) | 387 |
| SfaNI | GCATC | 3 cut(s) | 30, 374, 651 |
| SfcI | CTRYAG | 1 cut(s) | 360 |
| Sfr274I | CTCGAG | 1 cut(s) | 299 |
| SlaI | CTCGAG | 1 cut(s) | 299 |
| SmlI | CTYRAG | 2 cut(s) | 188, 299 |
| SmoI | CTYRAG | 2 cut(s) | 188, 299 |
| Sse9I | AATT | 2 cut(s) | 45, 458 |
| SsiI | CCGC | 2 cut(s) | 416, 534 |
| SspMI | CTAG | 1 cut(s) | 170 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| TaaI | ACNGT | 1 cut(s) | 11 |
| TaiI | ACGT | 1 cut(s) | 62 |
| TaqI | TCGA | 2 cut(s) | 157, 300 |
| TasI | AATT | 2 cut(s) | 45, 458 |
| Tru1I | TTAA | 2 cut(s) | 68, 715 |
| Tru9I | TTAA | 2 cut(s) | 68, 715 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TseI | GCWGC | 3 cut(s) | 220, 362, 491 |
| TspDTI | ATGAA | 3 cut(s) | 362, 479, 699 |
| TspRI | CASTG | 1 cut(s) | 84 |
| XbaI | TCTAGA | 1 cut(s) | 169 |
| XhoI | CTCGAG | 1 cut(s) | 299 |
| XspI | CTAG | 1 cut(s) | 170 |