Prupe.1G324300_v2.0.a1

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015610
Physical Location & Seq
Forward (+)
30950146 .. 30952302
2157 bp
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UTR
Exon/CDS
Intron
Prupe.1G324300.1

Sequence Viewer

Length: 534 bp
ATGGAAGCCGGACAGGGTTCGCCATCTTATTACAGAGTTCTTGGTGTCAGTTCGGACTCTTCCATTGAAGATATAAGGCGTGCTTACCGCAAGCTTGCTATGCAATGGCATCCGGACAGGTGGACAAGAACACCTTCTTTGTTGGGTGAAGCCAAGCGAAAATTCCAGCTTATTCAAGAAGCCTATTCAGTGTTATCAGACCAGAGGAAGCGGACCATGTACGATGCAGGCTTATATGATCCTGATGAGGAAGACGACGAGGGATTCTGTGATTTTGTGCAAGAAATGGTCTCTCTCATGGCCGAATCCAGAAGAGAGGCAAAGAATTATAGCATGGAGGATCTACAGACAATGTTGATGGAGATGGCCCAAGGGTTCGAGTCTCCTCCTCCGTCTTTGTTCTGTGGACAATCAGCTTTTGAACAGTCTGGATGCTTCAAGACCAAGAGGACGCGTCTAGAATCTCATTCAGGGGTGGACAGAGGCTCAGCTCTACACGTACCAAGCCTAGGAAATGGCTTCTTTTCATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

178

Amino Acids

20.17

Weight (kDa)

5.15

Isoelectric Point (pI)

61.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015610)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g32391
malus_domestica MD13G1025600.v1.1 MD16G1028400.v1.1
prunus_persica Prupe.1G324300_v2.0.a1
pyrus_communis pycom13g02430 pycom16g02430
rosa_chinensis RchiOBHm_Chr4g0441231
rosa_laevigata RLG00000006109
rosa_multiflora Rmu_sc0032990.1_g000001
rosa_roxburghii Rroxscaffold_5G00382140
rosa_rugosa Rorug04G0331700
rosa_samantha Rh4AG383500 Rh4BG397600 Rh4CG412800 Rh4DG390300
rosa_wichuraiana Rw4G033090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 454
AccIII TCCGGA 1 cut(s) 112
AciI CCGC 2 cut(s) 88, 211
AclWI GGATC 2 cut(s) 233, 348
AcoI YGGCCR 1 cut(s) 300
AcsI RAATTY 1 cut(s) 161
AfaI GTAC 2 cut(s) 221, 501
AfiI CCNNNNNNNGG 1 cut(s) 509
AflIII ACRYGT 2 cut(s) 452, 496
AgsI TTSAA 4 cut(s) 68, 176, 422, 439
AjuI GAANNNNNNNTTGG 2 cut(s) 146, 178
AluBI AGCT 4 cut(s) 94, 169, 416, 491
AluI AGCT 4 cut(s) 94, 169, 416, 491
Alw26I GTCTC 2 cut(s) 295, 387
AlwI GGATC 2 cut(s) 233, 348
Aor13HI TCCGGA 1 cut(s) 112
AoxI GGCC 2 cut(s) 300, 366
ApoI RAATTY 1 cut(s) 161
Asp700I GAANNNNTTC 1 cut(s) 133
AspA2I CCTAGG 1 cut(s) 508
AspS9I GGNCC 2 cut(s) 213, 367
AsuHPI GGTGA 1 cut(s) 158
AvaII GGWCC 1 cut(s) 213
AvrII CCTAGG 1 cut(s) 508
BbsI GAAGAC 1 cut(s) 258
BccI CCATC 3 cut(s) 31, 352, 358
BcoDI GTCTC 2 cut(s) 295, 387
BfaI CTAG 2 cut(s) 458, 509
BfmI CTRYAG 1 cut(s) 344
BlnI CCTAGG 1 cut(s) 508
BlpI GCTNAGC 1 cut(s) 487
Bme18I GGWCC 1 cut(s) 213
BmgT120I GGNCC 2 cut(s) 213, 367
BmsI GCATC 3 cut(s) 118, 214, 422
BpiI GAAGAC 1 cut(s) 258
Bpu1102I GCTNAGC 1 cut(s) 487
BsaAI YACGTR 1 cut(s) 499
BsaI GGTCTC 1 cut(s) 295
BsaJI CCNNGG 2 cut(s) 370, 508
BsaWI WCCGGW 1 cut(s) 112
Bsc4I CCNNNNNNNGG 1 cut(s) 509
Bse3DI GCAATG 1 cut(s) 110
BseAI TCCGGA 1 cut(s) 112
BseDI CCNNGG 2 cut(s) 370, 508
BseGI GGATG 2 cut(s) 109, 437
BseLI CCNNNNNNNGG 1 cut(s) 509
BseMI GCAATG 1 cut(s) 110
BseMII CTCAG 1 cut(s) 501
BseRI GAGGAG 2 cut(s) 375, 378
Bsh1236I CGCG 1 cut(s) 454
BshFI GGCC 2 cut(s) 302, 368
BsiSI CCGG 2 cut(s) 9, 113
BslI CCNNNNNNNGG 1 cut(s) 509
BsmAI GTCTC 2 cut(s) 295, 387
BsnI GGCC 2 cut(s) 302, 368
Bso31I GGTCTC 1 cut(s) 295
Bsp13I TCCGGA 1 cut(s) 112
Bsp143I GATC 2 cut(s) 238, 340
Bsp1720I GCTNAGC 1 cut(s) 487
BspACI CCGC 2 cut(s) 88, 211
BspANI GGCC 2 cut(s) 302, 368
BspCNI CTCAG 1 cut(s) 500
BspEI TCCGGA 1 cut(s) 112
BspFNI CGCG 1 cut(s) 454
BspPI GGATC 2 cut(s) 233, 348
BspTNI GGTCTC 1 cut(s) 295
BsrDI GCAATG 1 cut(s) 110
BssECI CCNNGG 2 cut(s) 370, 508
BssMI GATC 2 cut(s) 238, 340
BssT1I CCWWGG 2 cut(s) 370, 508
Bst4CI ACNGT 1 cut(s) 426
Bst6I CTCTTC 2 cut(s) 64, 307
BstBAI YACGTR 1 cut(s) 499
BstC8I GCNNGC 4 cut(s) 81, 92, 96, 229
BstDEI CTNAG 1 cut(s) 487
BstF5I GGATG 2 cut(s) 109, 437
BstFNI CGCG 1 cut(s) 454
BstKTI GATC 2 cut(s) 241, 343
BstMAI GTCTC 2 cut(s) 295, 387
BstMBI GATC 2 cut(s) 238, 340
BstMWI GCNNNNNNNGC 1 cut(s) 100
BstSFI CTRYAG 1 cut(s) 344
BstUI CGCG 1 cut(s) 454
BstV2I GAAGAC 1 cut(s) 258
BstX2I RGATCY 1 cut(s) 340
BstYI RGATCY 1 cut(s) 340
BsuRI GGCC 2 cut(s) 302, 368
BtsCI GGATG 2 cut(s) 109, 437
BtsIMutI CAGTG 1 cut(s) 195
Cac8I GCNNGC 4 cut(s) 81, 92, 96, 229
Cfr13I GGNCC 2 cut(s) 213, 367
CseI GACGC 2 cut(s) 443, 460
Csp6I GTAC 2 cut(s) 220, 500
CviAII CATG 3 cut(s) 217, 298, 334
CviQI GTAC 2 cut(s) 220, 500
DdeI CTNAG 1 cut(s) 487
DpnI GATC 2 cut(s) 240, 342
DpnII GATC 2 cut(s) 238, 340
EaeI YGGCCR 1 cut(s) 300
Eam1104I CTCTTC 2 cut(s) 64, 307
EarI CTCTTC 2 cut(s) 64, 307
Eco130I CCWWGG 2 cut(s) 370, 508
Eco31I GGTCTC 1 cut(s) 295
Eco47I GGWCC 1 cut(s) 213
EcoT14I CCWWGG 2 cut(s) 370, 508
ErhI CCWWGG 2 cut(s) 370, 508
FaeI CATG 3 cut(s) 220, 301, 337
FaiI YATR 8 cut(s) 74, 101, 218, 235, 237, 299, 330, 335
FalI AAGNNNNNCTT 4 cut(s) 67, 99, 118, 150
FatI CATG 3 cut(s) 216, 297, 333
FokI GGATG 2 cut(s) 96, 444
FspBI CTAG 2 cut(s) 458, 509
HaeIII GGCC 2 cut(s) 302, 368
HapII CCGG 2 cut(s) 9, 113
HgaI GACGC 2 cut(s) 443, 460
Hin1II CATG 3 cut(s) 220, 301, 337
HindIII AAGCTT 1 cut(s) 92
HinfI GANTC 5 cut(s) 56, 264, 305, 380, 461
HpaII CCGG 2 cut(s) 9, 113
HphI GGTGA 1 cut(s) 158
Hpy166II GTNNAC 3 cut(s) 123, 407, 478
Hpy188I TCNGA 2 cut(s) 55, 199
Hpy188III TCNNGA 7 cut(s) 113, 176, 242, 309, 429, 439, 458
Hpy8I GTNNAC 3 cut(s) 123, 407, 478
Hpy99I CGWCG 1 cut(s) 260
HpyAV CCTTC 1 cut(s) 144
HpyCH4III ACNGT 1 cut(s) 426
HpyCH4IV ACGT 1 cut(s) 498
HpyCH4V TGCA 3 cut(s) 103, 227, 280
HpyF10VI GCNNNNNNNGC 1 cut(s) 100
HpyF3I CTNAG 1 cut(s) 487
HpySE526I ACGT 1 cut(s) 498
Hsp92II CATG 3 cut(s) 220, 301, 337
Kpn2I TCCGGA 1 cut(s) 112
Kzo9I GATC 2 cut(s) 238, 340
LweI GCATC 3 cut(s) 118, 214, 422
MaeI CTAG 2 cut(s) 458, 509
MaeII ACGT 1 cut(s) 498
MalI GATC 2 cut(s) 240, 342
MboI GATC 2 cut(s) 238, 340
MboII GAAGA 4 cut(s) 51, 80, 263, 324
MflI RGATCY 1 cut(s) 340
MluCI AATT 2 cut(s) 161, 325
MluI ACGCGT 1 cut(s) 452
MlyI GAGTC 2 cut(s) 50, 389
MnlI CCTC 9 cut(s) 198, 241, 253, 310, 331, 396, 399, 441, 476
MroI TCCGGA 1 cut(s) 112
MroXI GAANNNNTTC 1 cut(s) 133
MspI CCGG 2 cut(s) 9, 113
MvnI CGCG 1 cut(s) 454
MwoI GCNNNNNNNGC 1 cut(s) 100
NdeII GATC 2 cut(s) 238, 340
NlaIII CATG 3 cut(s) 220, 301, 337
PdmI GAANNNNTTC 1 cut(s) 133
PfeI GAWTC 3 cut(s) 264, 305, 461
PleI GAGTC 2 cut(s) 50, 388
PpsI GAGTC 2 cut(s) 50, 388
Ppu21I YACGTR 1 cut(s) 499
PspPI GGNCC 2 cut(s) 213, 367
PsuI RGATCY 1 cut(s) 340
RsaI GTAC 2 cut(s) 221, 501
RsaNI GTAC 2 cut(s) 220, 500
Sau3AI GATC 2 cut(s) 238, 340
Sau96I GGNCC 2 cut(s) 213, 367
SchI GAGTC 2 cut(s) 50, 389
SetI ASST 7 cut(s) 96, 122, 136, 171, 418, 493, 501
SfaNI GCATC 3 cut(s) 118, 214, 422
SfcI CTRYAG 1 cut(s) 344
SinI GGWCC 1 cut(s) 213
Sse9I AATT 2 cut(s) 161, 325
SsiI CCGC 2 cut(s) 88, 211
SspMI CTAG 2 cut(s) 458, 509
StyI CCWWGG 2 cut(s) 370, 508
TaaI ACNGT 1 cut(s) 426
TaiI ACGT 1 cut(s) 501
TaqI TCGA 1 cut(s) 378
TasI AATT 2 cut(s) 161, 325
TfiI GAWTC 3 cut(s) 264, 305, 461
TscAI CASTG 1 cut(s) 195
TspDTI ATGAA 1 cut(s) 516
TspGWI ACGGA 1 cut(s) 381
TspRI CASTG 1 cut(s) 195
VpaK11BI GGWCC 1 cut(s) 213
XapI RAATTY 1 cut(s) 161
XbaI TCTAGA 1 cut(s) 457
XmaJI CCTAGG 1 cut(s) 508
XmnI GAANNNNTTC 1 cut(s) 133
XspI CTAG 2 cut(s) 458, 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.