Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009151

Physical Location & Seq

Genomic Coordinates Forward (+)

31067083 .. 31067928

Gene Structure 846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G326400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 294 bp

ATGGCTAGGCGTTTGATCCCAACCCTCAACCGTGTCCTGATTGAGAAAATCATCCCACCCTCTAAAACCACCGCCGGCATTCTCCTCCCCGAGTCATCCACCAAGCTAAACTCAGGGAAGGTGGTTGCTGTGGGACCAGGAGCCAAGGATAAGGCTGGGAATGTGATTCCAGTGGCTGTGAAAGAAGGTGATACAGTTCTTTTGCCTGAGTATGGGGGCACCCAAGTCAAGCTTGGTGACAAAGAGCTCCATTTATACAGGGATGAGGACATCTTGGGCACTCTCCATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005507 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006457 GO:0006458 GO:0006950 GO:0006986 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0010033 GO:0031974 GO:0035966 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051082 GO:0051084 GO:0051085 GO:0051087 GO:0061077 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn10

Protein Analysis

98

Amino Acids

10.37

Weight (kDa)

8.01

Isoelectric Point (pI)

27.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009151)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14980 AT1G14980 AT1G23100
fragaria_vesca	FvH4_4g32620
malus_domestica	MD09G1260100.v1.1 MD13G1024100.v1.1 MD16G1026800.v1.1
prunus_persica	Prupe.1G326400_v2.0.a1 Prupe.1G326400_v2.0.a1 Prupe.3G151700_v2.0.a1 Prupe.7G030600_v2.0.a1
pyrus_communis	pycom09g17470 pycom16g02260
rosa_chinensis	RchiOBHm_Chr4g0441491
rosa_multiflora	Rmu_sc0000353.1_g000043
rosa_roxburghii	Rroxscaffold_5G00382350
rosa_rugosa	Rorug04G0334200
rosa_samantha	Rh4AG385600 Rh4BG399700 Rh4CG414700 Rh4DG392400
rosa_wichuraiana	Rw4G033300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	218
AciI	CCGC	1 cut(s)	72
AclWI	GGATC	1 cut(s)	10
AfiI	CCNNNNNNNGG	1 cut(s)	212
AjnI	CCWGG	1 cut(s)	136
AluBI	AGCT	3 cut(s)	106, 232, 247
AluI	AGCT	3 cut(s)	106, 232, 247
Alw21I	GWGCWC	1 cut(s)	249
AlwI	GGATC	1 cut(s)	10
AlwNI	CAGNNNCTG	1 cut(s)	176
Ama87I	CYCGRG	1 cut(s)	89
AspS9I	GGNCC	1 cut(s)	134
AsuHPI	GGTGA	2 cut(s)	200, 248
AvaI	CYCGRG	1 cut(s)	89
AvaII	GGWCC	1 cut(s)	134
BaeGI	GKGCMC	2 cut(s)	221, 281
BanI	GGYRCC	1 cut(s)	218
BanII	GRGCYC	1 cut(s)	249
Bbv12I	GWGCWC	1 cut(s)	249
BciT130I	CCWGG	1 cut(s)	138
BfaI	CTAG	1 cut(s)	6
Bme1390I	CCNGG	1 cut(s)	138
Bme18I	GGWCC	1 cut(s)	134
BmeT110I	CYCGRG	1 cut(s)	89
BmgT120I	GGNCC	1 cut(s)	134
BmiI	GGNNCC	3 cut(s)	135, 142, 220
BmrFI	CCNGG	1 cut(s)	138
BsaJI	CCNNGG	1 cut(s)	144
Bsc4I	CCNNNNNNNGG	1 cut(s)	212
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	1 cut(s)	170
BseBI	CCWGG	1 cut(s)	138
BseDI	CCNNGG	1 cut(s)	144
BseGI	GGATG	3 cut(s)	51, 95, 268
BseLI	CCNNNNNNNGG	1 cut(s)	212
BseMII	CTCAG	2 cut(s)	126, 198
BseNI	ACTGG	1 cut(s)	170
BseRI	GAGGAG	1 cut(s)	74
BseSI	GKGCMC	2 cut(s)	221, 281
BseYI	CCCAGC	1 cut(s)	155
BshNI	GGYRCC	1 cut(s)	218
BsiHKAI	GWGCWC	1 cut(s)	249
BsiHKCI	CYCGRG	1 cut(s)	89
BsiSI	CCGG	1 cut(s)	75
BslFI	GGGAC	1 cut(s)	147
BslI	CCNNNNNNNGG	1 cut(s)	212
BsmFI	GGGAC	1 cut(s)	147
BsmI	GAATGC	1 cut(s)	78
BsoBI	CYCGRG	1 cut(s)	89
Bsp1286I	GDGCHC	3 cut(s)	221, 249, 281
Bsp143I	GATC	1 cut(s)	15
BspACI	CCGC	1 cut(s)	72
BspCNI	CTCAG	2 cut(s)	125, 199
BspLI	GGNNCC	3 cut(s)	135, 142, 220
BspPI	GGATC	1 cut(s)	10
BspT107I	GGYRCC	1 cut(s)	218
BsrFI	RCCGGY	1 cut(s)	74
BsrI	ACTGG	1 cut(s)	170
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	1 cut(s)	144
BssMI	GATC	1 cut(s)	15
BssT1I	CCWWGG	1 cut(s)	144
Bst2UI	CCWGG	1 cut(s)	138
Bst4CI	ACNGT	2 cut(s)	32, 196
BstC8I	GCNNGC	1 cut(s)	76
BstDEI	CTNAG	2 cut(s)	112, 207
BstF5I	GGATG	3 cut(s)	51, 95, 268
BstKTI	GATC	1 cut(s)	18
BstMBI	GATC	1 cut(s)	15
BstNI	CCWGG	1 cut(s)	138
BstSCI	CCNGG	1 cut(s)	136
BstSLI	GKGCMC	2 cut(s)	221, 281
BtsCI	GGATG	3 cut(s)	51, 95, 268
BtsIMutI	CAGTG	1 cut(s)	177
Cac8I	GCNNGC	1 cut(s)	76
CaiI	CAGNNNCTG	1 cut(s)	176
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	1 cut(s)	134
CviAII	CATG	1 cut(s)	287
CviJI	RGCY	7 cut(s)	5, 106, 143, 155, 176, 232, 247
CviKI_1	RGCY	7 cut(s)	5, 106, 143, 155, 176, 232, 247
DdeI	CTNAG	2 cut(s)	112, 207
DpnI	GATC	1 cut(s)	17
DpnII	GATC	1 cut(s)	15
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	1 cut(s)	144
Eco24I	GRGCYC	1 cut(s)	249
Eco47I	GGWCC	1 cut(s)	134
Eco53kI	GAGCTC	1 cut(s)	247
Eco88I	CYCGRG	1 cut(s)	89
EcoICRI	GAGCTC	1 cut(s)	247
EcoRII	CCWGG	1 cut(s)	136
EcoT14I	CCWWGG	1 cut(s)	144
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	1 cut(s)	144
FaeI	CATG	1 cut(s)	290
FaiI	YATR	3 cut(s)	213, 256, 288
FalI	AAGNNNNNCTT	2 cut(s)	216, 248
FaqI	GGGAC	1 cut(s)	147
FatI	CATG	1 cut(s)	286
FokI	GGATG	3 cut(s)	38, 82, 275
FriOI	GRGCYC	1 cut(s)	249
FspBI	CTAG	1 cut(s)	6
GsaI	CCCAGC	1 cut(s)	159
HapII	CCGG	1 cut(s)	75
Hin1II	CATG	1 cut(s)	290
HindIII	AAGCTT	1 cut(s)	230
HinfI	GANTC	2 cut(s)	92, 166
HpaII	CCGG	1 cut(s)	75
HphI	GGTGA	2 cut(s)	200, 248
Hpy188III	TCNNGA	1 cut(s)	37
HpyAV	CCTTC	2 cut(s)	112, 179
HpyCH4III	ACNGT	2 cut(s)	32, 196
HpyF3I	CTNAG	2 cut(s)	112, 207
Hsp92II	CATG	1 cut(s)	290
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	1 cut(s)	15
LmnI	GCTCC	2 cut(s)	140, 252
LpnPI	CCDG	9 cut(s)	50, 88, 99, 123, 141, 150, 183, 219, 244
MaeI	CTAG	1 cut(s)	6
MaeIII	GTNAC	1 cut(s)	236
MalI	GATC	1 cut(s)	17
MboI	GATC	1 cut(s)	15
MhlI	GDGCHC	3 cut(s)	221, 249, 281
MlyI	GAGTC	1 cut(s)	101
MnlI	CCTC	4 cut(s)	35, 70, 95, 259
MroNI	GCCGGC	1 cut(s)	74
MspI	CCGG	1 cut(s)	75
MspR9I	CCNGG	1 cut(s)	138
Mva1269I	GAATGC	1 cut(s)	78
MvaI	CCWGG	1 cut(s)	138
NaeI	GCCGGC	1 cut(s)	76
NdeII	GATC	1 cut(s)	15
NgoMIV	GCCGGC	1 cut(s)	74
NlaIII	CATG	1 cut(s)	290
NlaIV	GGNNCC	3 cut(s)	135, 142, 220
NmuCI	GTSAC	1 cut(s)	236
PctI	GAATGC	1 cut(s)	78
PdiI	GCCGGC	1 cut(s)	76
PfeI	GAWTC	1 cut(s)	166
PleI	GAGTC	1 cut(s)	100
PpsI	GAGTC	1 cut(s)	100
Psp124BI	GAGCTC	1 cut(s)	249
Psp6I	CCWGG	1 cut(s)	136
PspFI	CCCAGC	1 cut(s)	155
PspGI	CCWGG	1 cut(s)	136
PspN4I	GGNNCC	3 cut(s)	135, 142, 220
PspPI	GGNCC	1 cut(s)	134
PstNI	CAGNNNCTG	1 cut(s)	176
SacI	GAGCTC	1 cut(s)	249
Sau3AI	GATC	1 cut(s)	15
Sau96I	GGNCC	1 cut(s)	134
SchI	GAGTC	1 cut(s)	101
ScrFI	CCNGG	1 cut(s)	138
SduI	GDGCHC	3 cut(s)	221, 249, 281
SetI	ASST	5 cut(s)	108, 123, 190, 234, 249
SinI	GGWCC	1 cut(s)	134
SsiI	CCGC	1 cut(s)	72
SspMI	CTAG	1 cut(s)	6
SstI	GAGCTC	1 cut(s)	249
StyD4I	CCNGG	1 cut(s)	136
StyI	CCWWGG	1 cut(s)	144
TaaI	ACNGT	2 cut(s)	32, 196
TfiI	GAWTC	1 cut(s)	166
TscAI	CASTG	1 cut(s)	177
TseFI	GTSAC	1 cut(s)	236
Tsp45I	GTSAC	1 cut(s)	236
TspRI	CASTG	1 cut(s)	177
VpaK11BI	GGWCC	1 cut(s)	134
XcmI	CCANNNNNNNNNTGG	1 cut(s)	230
XspI	CTAG	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.