Prupe.1G329500_v2.0.a1

Uncharacterized protein At4g22758-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
31275679 .. 31276512
834 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G329500.1

Sequence Viewer

Length: 417 bp
ATGTTGCTGTACAAGCAGAAGAAGAATCCAAACAGCGCCAAGGGCAACAGGCTCTTGATCAGCATCACTGTGCTCGGCAGCGCCGGCCCGATCCGCTTCGTTGTCAACGAGGAGGAGCTTGTCGCTGCCGTCATCGATACGGCCTTGAAATCTTATGCGCGTGAGGGCCGCCTTCCGGTTCTTGGCTCAGATCTTAATGACTTCCTGCTCTACTGCCCCAACGCAGGACCTGATGCTCTGAGTCCGTGGGACACAATTGGAGCACAAGGAGCTCGTAACTTTATGCTGTGCAAGAAGCCTCAGCCAGTGAAAATGGATAGCGATGAAATACCAGCGGCTGCAATTACTCGCAAGGGTAGTGGGAGTTGGAAGGCATGGATCAATAAGTCCCTCAATCTCAAGATCTCCTCCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

139

Amino Acids

14.99

Weight (kDa)

9.48

Isoelectric Point (pI)

29.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G23150 AT1G70780
fragaria_vesca FvH4_4g32830
malus_domestica MD13G1022300.v1.1 MD16G1023400.v1.1
prunus_persica Prupe.1G329500_v2.0.a1
pyrus_communis pycom13g02080
rosa_chinensis RchiOBHm_Chr4g0441841
rosa_laevigata RLG00000006061
rosa_multiflora Rmu_sc0008316.1_g000006
rosa_roxburghii Rroxscaffold_5G00382670
rosa_rugosa Rorug04G0336600
rosa_samantha Rh4AG388000 Rh4BG401700 Rh4CG416700 Rh4DG395100
rosa_wichuraiana Rw4G033500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 160
AciI CCGC 3 cut(s) 94, 169, 335
AclWI GGATC 2 cut(s) 85, 386
AfaI GTAC 1 cut(s) 11
AfiI CCNNNNNNNGG 3 cut(s) 175, 182, 224
AgsI TTSAA 1 cut(s) 148
AluBI AGCT 2 cut(s) 118, 272
AluI AGCT 2 cut(s) 118, 272
Alw21I GWGCWC 3 cut(s) 75, 265, 274
AlwI GGATC 2 cut(s) 85, 386
AlwNI CAGNNNCTG 2 cut(s) 230, 338
AoxI GGCC 3 cut(s) 85, 141, 166
ApeKI GCWGC 3 cut(s) 78, 125, 338
AspLEI GCGC 3 cut(s) 38, 83, 160
AspS9I GGNCC 3 cut(s) 86, 166, 227
AvaII GGWCC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 274
Bbv12I GWGCWC 3 cut(s) 75, 265, 274
BbvCI CCTCAGC 1 cut(s) 300
BbvI GCAGC 3 cut(s) 90, 112, 325
BceAI ACGGC 2 cut(s) 113, 156
BclI TGATCA 1 cut(s) 57
BfoI RGCGCY 2 cut(s) 39, 84
BglII AGATCT 2 cut(s) 190, 402
BisI GCNGC 5 cut(s) 79, 126, 169, 336, 339
BlsI GCNGC 5 cut(s) 80, 127, 170, 337, 340
Bme18I GGWCC 1 cut(s) 227
BmgT120I GGNCC 3 cut(s) 86, 166, 227
BmsI GCATC 2 cut(s) 72, 223
Bpu10I CCTNAGC 1 cut(s) 300
BpuEI CTTGAG 1 cut(s) 383
Bsa29I ATCGAT 1 cut(s) 135
BsaBI GATNNNNATC 1 cut(s) 62
BsaJI CCNNGG 2 cut(s) 39, 245
BsaWI WCCGGW 1 cut(s) 175
Bsc4I CCNNNNNNNGG 3 cut(s) 175, 182, 224
Bse118I RCCGGY 1 cut(s) 83
Bse1I ACTGG 1 cut(s) 305
Bse8I GATNNNNATC 1 cut(s) 62
BseCI ATCGAT 1 cut(s) 135
BseDI CCNNGG 2 cut(s) 39, 245
BseJI GATNNNNATC 1 cut(s) 62
BseLI CCNNNNNNNGG 3 cut(s) 175, 182, 224
BseMII CTCAG 3 cut(s) 201, 230, 314
BseNI ACTGG 1 cut(s) 305
BseRI GAGGAG 3 cut(s) 125, 128, 397
BseXI GCAGC 3 cut(s) 90, 112, 325
Bsh1236I CGCG 1 cut(s) 160
BshFI GGCC 3 cut(s) 87, 143, 168
BshVI ATCGAT 1 cut(s) 135
BsiHKAI GWGCWC 3 cut(s) 75, 265, 274
BsiSI CCGG 2 cut(s) 84, 176
BslFI GGGAC 2 cut(s) 263, 373
BslI CCNNNNNNNGG 3 cut(s) 175, 182, 224
BsmFI GGGAC 2 cut(s) 263, 373
BsnI GGCC 3 cut(s) 87, 143, 168
Bsp1286I GDGCHC 3 cut(s) 75, 265, 274
Bsp1407I TGTACA 1 cut(s) 9
Bsp143I GATC 5 cut(s) 57, 90, 190, 378, 402
BspACI CCGC 3 cut(s) 94, 169, 335
BspANI GGCC 3 cut(s) 87, 143, 168
BspCNI CTCAG 3 cut(s) 200, 231, 313
BspDI ATCGAT 1 cut(s) 135
BspFNI CGCG 1 cut(s) 160
BspPI GGATC 2 cut(s) 85, 386
BsrFI RCCGGY 1 cut(s) 83
BsrGI TGTACA 1 cut(s) 9
BsrI ACTGG 1 cut(s) 305
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 2 cut(s) 39, 245
BssMI GATC 5 cut(s) 57, 90, 190, 378, 402
BssT1I CCWWGG 1 cut(s) 39
Bst4CI ACNGT 1 cut(s) 70
BstAUI TGTACA 1 cut(s) 9
BstC8I GCNNGC 1 cut(s) 85
BstDEI CTNAG 3 cut(s) 187, 239, 300
BstDSI CCRYGG 1 cut(s) 245
BstFNI CGCG 1 cut(s) 160
BstH2I RGCGCY 2 cut(s) 39, 84
BstHHI GCGC 3 cut(s) 38, 83, 160
BstKTI GATC 5 cut(s) 60, 93, 193, 381, 405
BstMBI GATC 5 cut(s) 57, 90, 190, 378, 402
BstMWI GCNNNNNNNGC 5 cut(s) 13, 42, 84, 93, 269
BstUI CGCG 1 cut(s) 160
BstV1I GCAGC 3 cut(s) 90, 112, 325
BstX2I RGATCY 2 cut(s) 190, 402
BstYI RGATCY 2 cut(s) 190, 402
Bsu15I ATCGAT 1 cut(s) 135
BsuRI GGCC 3 cut(s) 87, 143, 168
BsuTUI ATCGAT 1 cut(s) 135
BtgI CCRYGG 1 cut(s) 245
BtgZI GCGATG 1 cut(s) 336
BtsIMutI CAGTG 2 cut(s) 66, 312
Cac8I GCNNGC 1 cut(s) 85
CaiI CAGNNNCTG 2 cut(s) 230, 338
CfoI GCGC 3 cut(s) 38, 83, 160
Cfr10I RCCGGY 1 cut(s) 83
Cfr13I GGNCC 3 cut(s) 86, 166, 227
ClaI ATCGAT 1 cut(s) 135
Csp6I GTAC 1 cut(s) 10
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviAII CATG 1 cut(s) 375
CviQI GTAC 1 cut(s) 10
DdeI CTNAG 3 cut(s) 187, 239, 300
DpnI GATC 5 cut(s) 59, 92, 192, 380, 404
DpnII GATC 5 cut(s) 57, 90, 190, 378, 402
Ecl136II GAGCTC 1 cut(s) 272
Eco130I CCWWGG 1 cut(s) 39
Eco24I GRGCYC 1 cut(s) 274
Eco47I GGWCC 1 cut(s) 227
Eco53kI GAGCTC 1 cut(s) 272
EcoICRI GAGCTC 1 cut(s) 272
EcoO109I RGGNCCY 1 cut(s) 227
EcoT14I CCWWGG 1 cut(s) 39
EcoT38I GRGCYC 1 cut(s) 274
ErhI CCWWGG 1 cut(s) 39
FaeI CATG 1 cut(s) 378
FaiI YATR 3 cut(s) 156, 284, 376
FaqI GGGAC 2 cut(s) 263, 373
FatI CATG 1 cut(s) 374
FbaI TGATCA 1 cut(s) 57
Fnu4HI GCNGC 5 cut(s) 79, 126, 169, 336, 339
FriOI GRGCYC 1 cut(s) 274
Fsp4HI GCNGC 5 cut(s) 79, 126, 169, 336, 339
GlaI GCGC 3 cut(s) 37, 82, 159
GluI GCNGC 5 cut(s) 79, 126, 169, 336, 339
HaeII RGCGCY 2 cut(s) 39, 84
HaeIII GGCC 3 cut(s) 87, 143, 168
HapII CCGG 2 cut(s) 84, 176
HhaI GCGC 3 cut(s) 38, 83, 160
Hin1II CATG 1 cut(s) 378
Hin6I GCGC 3 cut(s) 36, 81, 158
HinP1I GCGC 3 cut(s) 36, 81, 158
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HinfI GANTC 2 cut(s) 25, 241
HpaII CCGG 2 cut(s) 84, 176
Hpy166II GTNNAC 1 cut(s) 106
Hpy188I TCNGA 2 cut(s) 190, 240
Hpy188III TCNNGA 2 cut(s) 55, 400
Hpy8I GTNNAC 1 cut(s) 106
HpyAV CCTTC 2 cut(s) 182, 364
HpyCH4III ACNGT 1 cut(s) 70
HpyCH4V TGCA 2 cut(s) 291, 341
HpyF10VI GCNNNNNNNGC 5 cut(s) 13, 42, 84, 93, 269
HpyF3I CTNAG 3 cut(s) 187, 239, 300
Hsp92II CATG 1 cut(s) 378
HspAI GCGC 3 cut(s) 36, 81, 158
KroI GCCGGC 1 cut(s) 83
KroNI GCCGGC 1 cut(s) 85
Ksp22I TGATCA 1 cut(s) 57
Kzo9I GATC 5 cut(s) 57, 90, 190, 378, 402
LmnI GCTCC 3 cut(s) 115, 260, 269
LpnPI CCDG 8 cut(s) 34, 97, 189, 210, 218, 243, 318, 345
Lsp1109I GCAGC 3 cut(s) 90, 112, 325
LweI GCATC 2 cut(s) 72, 223
MaeIII GTNAC 1 cut(s) 275
MalI GATC 5 cut(s) 59, 92, 192, 380, 404
MboI GATC 5 cut(s) 57, 90, 190, 378, 402
MboII GAAGA 2 cut(s) 31, 34
MfeI CAATTG 1 cut(s) 255
MflI RGATCY 2 cut(s) 190, 402
MhlI GDGCHC 3 cut(s) 75, 265, 274
MluCI AATT 2 cut(s) 255, 342
MlyI GAGTC 1 cut(s) 250
MmeI TCCRAC 1 cut(s) 347
MnlI CCTC 5 cut(s) 103, 106, 157, 309, 401
MroNI GCCGGC 1 cut(s) 83
MseI TTAA 2 cut(s) 195, 415
MslI CAYNNNNRTG 1 cut(s) 68
MspA1I CMGCKG 1 cut(s) 335
MspI CCGG 2 cut(s) 84, 176
MunI CAATTG 1 cut(s) 255
MvnI CGCG 1 cut(s) 160
MwoI GCNNNNNNNGC 5 cut(s) 13, 42, 84, 93, 269
NaeI GCCGGC 1 cut(s) 85
NdeII GATC 5 cut(s) 57, 90, 190, 378, 402
NgoMIV GCCGGC 1 cut(s) 83
NlaIII CATG 1 cut(s) 378
NmeAIII GCCGAG 1 cut(s) 54
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PdiI GCCGGC 1 cut(s) 85
PfeI GAWTC 1 cut(s) 25
PkrI GCNGC 5 cut(s) 80, 127, 170, 337, 340
PleI GAGTC 1 cut(s) 249
PpsI GAGTC 1 cut(s) 249
PpuMI RGGWCCY 1 cut(s) 227
Psp124BI GAGCTC 1 cut(s) 274
Psp5II RGGWCCY 1 cut(s) 227
PspPI GGNCC 3 cut(s) 86, 166, 227
PspPPI RGGWCCY 1 cut(s) 227
PstNI CAGNNNCTG 2 cut(s) 230, 338
PsuI RGATCY 2 cut(s) 190, 402
RsaI GTAC 1 cut(s) 11
RsaNI GTAC 1 cut(s) 10
RseI CAYNNNNRTG 1 cut(s) 68
SacI GAGCTC 1 cut(s) 274
SaqAI TTAA 2 cut(s) 195, 415
SatI GCNGC 5 cut(s) 79, 126, 169, 336, 339
Sau3AI GATC 5 cut(s) 57, 90, 190, 378, 402
Sau96I GGNCC 3 cut(s) 86, 166, 227
SchI GAGTC 1 cut(s) 250
SduI GDGCHC 3 cut(s) 75, 265, 274
SetI ASST 3 cut(s) 120, 232, 274
SfaNI GCATC 2 cut(s) 72, 223
SinI GGWCC 1 cut(s) 227
SmiMI CAYNNNNRTG 1 cut(s) 68
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
Sse9I AATT 2 cut(s) 255, 342
SsiI CCGC 3 cut(s) 94, 169, 335
SstI GAGCTC 1 cut(s) 274
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 1 cut(s) 70
TaqI TCGA 1 cut(s) 135
TasI AATT 2 cut(s) 255, 342
TatI WGTACW 1 cut(s) 9
TauI GCSGC 2 cut(s) 171, 338
TfiI GAWTC 1 cut(s) 25
Tru1I TTAA 2 cut(s) 195, 415
Tru9I TTAA 2 cut(s) 195, 415
TscAI CASTG 2 cut(s) 73, 312
TseI GCWGC 3 cut(s) 78, 125, 338
TspDTI ATGAA 1 cut(s) 339
TspGWI ACGGA 1 cut(s) 234
TspRI CASTG 2 cut(s) 73, 312
VpaK11BI GGWCC 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.